CmoCh08G002890 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh08G002890
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(MYB transcription factor) (Myb DNA-binding protein) (Myb domain protein 14) (Myb family transcription factor)
LocationCmo_Chr08 : 1786543 .. 1787639 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAAATGGGAAGGGCTCCATGCTGTGAGAAAGTGGGGCTGAAGAGAGGGCCATGGAGCCCTCAAGAAGACCAAATTCTTATCAAATTCATTCAACAAAATGGGCATTCCAATTGGAGGGCACTTCCCAAAAGAGCTGGTTTATATCTTATTTGCAAAACCCATTATGTAAATTCTCTTCGATTTGTATTTTATCGTTTGTTTTGTATTGTATTATAGGACTGTTACGGTGCGGGAAAAGTTGTAGGCTTCGATGGATCAATTATCTAAGGCCAGACCTTAAACGAGGAGATTTCACTCGTGAAGAAGAGGAAACGATTATAAACTTGCATCAGTTGTTGGGAAACAGGTGCTTCTTGATATTTTTCAAATGGGTATCCTCGAAATAGTCTGATTGTTGGGTTTGTTTTAGTTCAACTGATGGGAGGGTTGGAATCACTCGGCTCTTAGTTGAGAGTGATATTCTTTAACTAATTGAGCTATTCAAGTTGATCTGGTTCGGTTGAAACTTTACTAAAAGTTTCATTTTTTATGGTTCAAAATATTGATGGATGTGGATTGGTAAACAATATTGTTAGTTTAAATTATCTTACAAATTTGCTAATGGTATTATTTAGTTATGTAATTTCTTTGTATTATTCAGATGGTCGATGATTGCAGCAAAGTTACCTGGAAGAACAGATAACGAGATTAAAAATGTTTGGCACACTTCTTTGAAGAAGAGATTAAACCAAAGCCAAACTCGAGAAGATCACACCGAGCTAAACAAGAATGATATCCCTTTTCGAGATCAACCACCATGTTCGTTGGATATCAAATCAGACGGAGAGGAAAATGTTGATCGTTGTACTAAGAACAACGATGATGGTAAGGATACCAAACTCGAGGAGCTTGCTTTTGCAAAAGATTTCTTAGAGAATTTATTTTCGGAAGAAGAAATTTTTCCGAACAATTGTGATATGATAAAAAATGATGATCAATCACCCAAAGACGTTGAAATTTCTTCAGACACAGTTGATATCATGGATTTTTGGAGAGGTGTTTTTATGAAAGATGGAGAGTTACCTGAGCTACAAGAAATTAATATAATATAA

mRNA sequence

ATGAAGAAAATGGGAAGGGCTCCATGCTGTGAGAAAGTGGGGCTGAAGAGAGGGCCATGGAGCCCTCAAGAAGACCAAATTCTTATCAAATTCATTCAACAAAATGGGCATTCCAATTGGAGGGCACTTCCCAAAAGAGCTGGTTTATATCTTATTTGCAAAACCCATTATGTAAATTCTCTTCGATTTGTATTTTATCGACTGTTACGGTGCGGGAAAAGTTGTAGGCTTCGATGGATCAATTATCTAAGGCCAGACCTTAAACGAGGAGATTTCACTCGTGAAGAAGAGGAAACGATTATAAACTTGCATCAGTTGTTGGGAAACAGATGGTCGATGATTGCAGCAAAGTTACCTGGAAGAACAGATAACGAGATTAAAAATGTTTGGCACACTTCTTTGAAGAAGAGATTAAACCAAAGCCAAACTCGAGAAGATCACACCGAGCTAAACAAGAATGATATCCCTTTTCGAGATCAACCACCATGTTCGTTGGATATCAAATCAGACGGAGAGGAAAATGTTGATCGTTGTACTAAGAACAACGATGATGGTAAGGATACCAAACTCGAGGAGCTTGCTTTTGCAAAAGATTTCTTAGAGAATTTATTTTCGGAAGAAGAAATTTTTCCGAACAATTGTGATATGATAAAAAATGATGATCAATCACCCAAAGACGTTGAAATTTCTTCAGACACAGTTGATATCATGGATTTTTGGAGAGGTGTTTTTATGAAAGATGGAGAGTTACCTGAGCTACAAGAAATTAATATAATATAA

Coding sequence (CDS)

ATGAAGAAAATGGGAAGGGCTCCATGCTGTGAGAAAGTGGGGCTGAAGAGAGGGCCATGGAGCCCTCAAGAAGACCAAATTCTTATCAAATTCATTCAACAAAATGGGCATTCCAATTGGAGGGCACTTCCCAAAAGAGCTGGTTTATATCTTATTTGCAAAACCCATTATGTAAATTCTCTTCGATTTGTATTTTATCGACTGTTACGGTGCGGGAAAAGTTGTAGGCTTCGATGGATCAATTATCTAAGGCCAGACCTTAAACGAGGAGATTTCACTCGTGAAGAAGAGGAAACGATTATAAACTTGCATCAGTTGTTGGGAAACAGATGGTCGATGATTGCAGCAAAGTTACCTGGAAGAACAGATAACGAGATTAAAAATGTTTGGCACACTTCTTTGAAGAAGAGATTAAACCAAAGCCAAACTCGAGAAGATCACACCGAGCTAAACAAGAATGATATCCCTTTTCGAGATCAACCACCATGTTCGTTGGATATCAAATCAGACGGAGAGGAAAATGTTGATCGTTGTACTAAGAACAACGATGATGGTAAGGATACCAAACTCGAGGAGCTTGCTTTTGCAAAAGATTTCTTAGAGAATTTATTTTCGGAAGAAGAAATTTTTCCGAACAATTGTGATATGATAAAAAATGATGATCAATCACCCAAAGACGTTGAAATTTCTTCAGACACAGTTGATATCATGGATTTTTGGAGAGGTGTTTTTATGAAAGATGGAGAGTTACCTGAGCTACAAGAAATTAATATAATATAA
Homology
[Close]
BLAST of CmoCh08G002890 vs. Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2)

HSP 1 Score: 208.8 bits (530), Expect = 7.3e-53
Identity = 93/136 (68.38%), Postives = 112/136 (82.35%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           MGRAPCCEK+GLK+GPW+P+ED++L+  IQ++GH NWRALPK+AGL              
Sbjct: 1   MGRAPCCEKMGLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRWINYLRPD+KRG+F++EEE+TII+LH+LLGNRWS IAA+LPGRTD
Sbjct: 61  -----LRCGKSCRLRWINYLRPDIKRGNFSKEEEDTIIHLHELLGNRWSAIAARLPGRTD 117

Query: 124 NEIKNVWHTSLKKRLN 140
           NEIKNVWHT LKKRL+
Sbjct: 121 NEIKNVWHTHLKKRLD 117

[Close]
BLAST of CmoCh08G002890 vs. Swiss-Prot
Match: MYB1_MAIZE (Myb-related protein Zm1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.4e-48
Identity = 92/141 (65.25%), Postives = 106/141 (75.18%), Query Frame = 1 

Query: 5   GRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRFV 64
           GRAPCC KVGL RG W+PQED  LI +IQ++GH+NWRALPK+AGL               
Sbjct: 4   GRAPCCAKVGLNRGSWTPQEDMRLIAYIQKHGHTNWRALPKQAGL--------------- 63

Query: 65  FYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTDN 124
               LRCGKSCRLRWINYLRPDLKRG+FT EEEE II LH LLGN+WS IAA LPGRTDN
Sbjct: 64  ----LRCGKSCRLRWINYLRPDLKRGNFTDEEEEAIIRLHGLLGNKWSKIAACLPGRTDN 123

Query: 125 EIKNVWHTSLKKRLNQSQTRE 146
           EIKNVW+T LKK++ Q + ++
Sbjct: 124 EIKNVWNTHLKKKVAQREKKK 125

[Close]
BLAST of CmoCh08G002890 vs. Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 6.2e-44
Identity = 91/156 (58.33%), Postives = 104/156 (66.67%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           MGR PCCEKVGL+RGPW+ +EDQ L+  I  NG S WRA+PK AGL              
Sbjct: 1   MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRW NYLRPDLKRG F+  EE  I++LH  LGNRWS IAA+LPGRTD
Sbjct: 61  -----LRCGKSCRLRWTNYLRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTD 120

Query: 124 NEIKNVWHTSLKKRLNQSQTREDHTELNKNDIPFRD 160
           NEIKN W+T LKKRL +SQ  + +T L   D    D
Sbjct: 121 NEIKNYWNTRLKKRL-RSQGLDPNTHLPLEDSKLDD 136

[Close]
BLAST of CmoCh08G002890 vs. Swiss-Prot
Match: MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.1e-43
Identity = 81/136 (59.56%), Postives = 96/136 (70.59%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           MGRAPCCEKVG+KRG W+ +EDQIL  +IQ NG  +WR+LPK AGL              
Sbjct: 1   MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLK------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                 RCGKSCRLRWINYLR DLKRG+ T EEEE ++ LH  LGNRWS+IA  LPGRTD
Sbjct: 61  ------RCGKSCRLRWINYLRSDLKRGNITPEEEELVVKLHSTLGNRWSLIAGHLPGRTD 117

Query: 124 NEIKNVWHTSLKKRLN 140
           NEIKN W++ L ++L+
Sbjct: 121 NEIKNYWNSHLSRKLH 117

[Close]
BLAST of CmoCh08G002890 vs. Swiss-Prot
Match: MYB5_ARATH (Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.0e-42
Identity = 80/149 (53.69%), Postives = 104/149 (69.80%), Query Frame = 1 

Query: 8   PCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRFVFYR 67
           PCC K+G+KRGPW+ +ED+IL+ FI++ G   WR+LPKRAG                   
Sbjct: 16  PCCTKMGMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAG------------------- 75

Query: 68  LLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTDNEIK 127
           LLRCGKSCRLRW+NYLRP +KRG  T +EE+ I+ LH+LLGNRWS+IA ++PGRTDNEIK
Sbjct: 76  LLRCGKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIK 135

Query: 128 NVWHTSLKKR-LNQSQTREDHTELNKNDI 156
           N W+T L+K+ L Q    + H  L+ N+I
Sbjct: 136 NYWNTHLRKKLLRQGIDPQTHKPLDANNI 145

[Close]
BLAST of CmoCh08G002890 vs. TrEMBL
Match: A0A0A0KAA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375780 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.1e-87
Identity = 177/276 (64.13%), Postives = 202/276 (73.19%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           MGRAPCCEKVGLKRGPWS +EDQILIKFIQ NGHSNWRALPK+AGL              
Sbjct: 1   MGRAPCCEKVGLKRGPWSFEEDQILIKFIQLNGHSNWRALPKKAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRW NYLRPD+KRGDFT+EE +TII LHQL+GNRW+ IAA+LPGRTD
Sbjct: 61  -----LRCGKSCRLRWTNYLRPDIKRGDFTQEEAQTIITLHQLMGNRWAAIAARLPGRTD 120

Query: 124 NEIKNVWHTSLKKRLNQSQTREDHTELNKN-DIPFRDQPPCSLDIKSDGEENVDRCTKNN 183
           NEIKNVWHT LKKR+ Q++  +D T+ NKN D  F DQ  CS +IK DGEE++DRC KNN
Sbjct: 121 NEIKNVWHTHLKKRVIQNEILKDQTKQNKNDDNHFHDQLSCSSEIKLDGEEDIDRCIKNN 180

Query: 184 DDGKDTKLEELAFAKDFLENLFSEEEIFPN-------NCDMIKN-DDQSPKDVEI----- 243
           +D KD +L ELAFA+DFL++L  EEE   N       +C MIK+  D+SPK+VEI     
Sbjct: 181 NDDKDAELAELAFAEDFLKSLLLEEEFSENDWNNLGKDCVMIKDVVDESPKEVEIPLSGE 240

Query: 244 -------SSDTVDIMDFWRGVFMKDGELPELQEINI 259
                  SSDTVDIMDFWR VFMKDG   ELQEINI
Sbjct: 241 EEMSNCSSSDTVDIMDFWRNVFMKDG---ELQEINI 254

[Close]
BLAST of CmoCh08G002890 vs. TrEMBL
Match: A0A0K1SB66_REHGL (R2R3-MYB protein OS=Rehmannia glutinosa GN=MYB11 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.1e-61
Identity = 132/273 (48.35%), Postives = 183/273 (67.03%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           M RAPCCEK+GLK+GPWSP+EDQIL+ FIQQNGH NWRALPK+AGL              
Sbjct: 1   MVRAPCCEKMGLKKGPWSPEEDQILVSFIQQNGHGNWRALPKQAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRW NYLRPD+KRG+F++EEEETIINLH++LGNRWS IAA+LPGRTD
Sbjct: 61  -----LRCGKSCRLRWTNYLRPDIKRGNFSKEEEETIINLHEMLGNRWSAIAARLPGRTD 120

Query: 124 NEIKNVWHTSLKKRLNQSQTREDHTELNKNDIPFRDQPPCSLDIKSDGEENV----DRC- 183
           NEIKNVWHT LKK+L   Q+ +D    + N IP  D  P  L+  S+ ++N+     +C 
Sbjct: 121 NEIKNVWHTHLKKKLKIHQSSQDSKRHSINPIPKCD--PKVLE-NSNSDQNIVTSPQQCS 180

Query: 184 ------TKNNDDGKDTKLEELAFAKDFL----ENLFSEE----EIFPNNCDMIKNDDQSP 243
                 T ++ + K+ K EE+ ++ ++     E+ +SEE    +++  + D  +++D+ P
Sbjct: 181 SEMSSVTDSSIEKKEVKNEEMDYSSEYFPQIDESFWSEELSKDDVYCPSADKTEDEDRFP 240

Query: 244 --KDVEISSDTVDIMDFWRGVFMKDGELPELQE 256
             ++VE  + + D MDFW  +F++ G++P+L E
Sbjct: 241 FMQNVE-DARSDDSMDFWYNLFIRAGDMPDLPE 250

[Close]
BLAST of CmoCh08G002890 vs. TrEMBL
Match: Q40174_SOLLC (THM18 protein OS=Solanum lycopersicum GN=THM18 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.3e-56
Identity = 124/284 (43.66%), Postives = 167/284 (58.80%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           MGRAPCCEK+GLK+GPW+PQED ILI +IQ NGHSNWRALPK AGL              
Sbjct: 1   MGRAPCCEKMGLKKGPWTPQEDNILISYIQNNGHSNWRALPKLAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRW NYLRPD+KRG+FT+EEE+TII LH+ LGNRWS IAA+LPGRTD
Sbjct: 61  -----LRCGKSCRLRWTNYLRPDIKRGNFTKEEEDTIIKLHENLGNRWSAIAARLPGRTD 120

Query: 124 NEIKNVWHTSLKKRLN-----QSQTREDHTELNKNDIPFRDQPPCSLDIKSDGEENVDRC 183
           NEIKN+WHT+LKK+L      Q+  R   T    N  P   +   + D+ +  ++++ + 
Sbjct: 121 NEIKNIWHTNLKKKLKNYQPCQNSKRHSKTSHVSNKGPTTSESSNNSDLSTSTKQHI-KI 180

Query: 184 TKNNDDGKDTKLEELAFAKDFLEN-LFSEEEIFPNNCDMIKNDDQS-------------- 243
             N+     +++  +    D  +  +  EE+I  ++ +     D+S              
Sbjct: 181 APNSPQLSSSEMSSVTLVVDDNQMVIIKEEKIESSSSEYFPKIDESFWADELSTENNMII 240

Query: 244 --PKDVEISSDTVDI----------MDFWRGVFMKDGELPELQE 256
              +++++  + VDI          MDFW  VF+K G+LPEL E
Sbjct: 241 GHDQEIQVREENVDIFTTSSKMEEDMDFWYNVFIKTGDLPELPE 264

[Close]
BLAST of CmoCh08G002890 vs. TrEMBL
Match: M1BCC5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400016292 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.3e-56
Identity = 126/286 (44.06%), Postives = 162/286 (56.64%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           MGRAPCCEK+GLK+GPWSP+ED ILI +IQ NGHSNWRALPK AGL              
Sbjct: 1   MGRAPCCEKMGLKKGPWSPEEDNILISYIQNNGHSNWRALPKLAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRW NYLRPD+KRG+FT+EEE+TII LH+ LGNRWS IAA+LPGRTD
Sbjct: 61  -----LRCGKSCRLRWTNYLRPDIKRGNFTKEEEDTIIKLHENLGNRWSAIAARLPGRTD 120

Query: 124 NEIKNVWHTSLKKRLNQ---SQTREDHTEL----NKNDIPFRDQPPCSLDIKSDGEENVD 183
           NEIKN+WHT+LKK+L     SQ  + H+++    NK   P            S   +   
Sbjct: 121 NEIKNIWHTNLKKKLKNYQLSQNSKRHSKINHVSNKGPTPSESSNNSDFSTNSTSTKQHI 180

Query: 184 RCTKNNDDGKDTKLEELAFAKDFLENLF--------SEEEIFPNNCDMIKNDDQS----- 243
           +   N+     +++  +    D  + +         S  E FP   +    D+ S     
Sbjct: 181 KIAPNSPQLSSSEMSSVTLVVDDNQMVIIKEEKIESSSSEYFPKIDESFWTDELSTENNM 240

Query: 244 ----PKDVEISSDTVDI----------MDFWRGVFMKDGELPELQE 256
                +++++  + VDI          MDFW  VF+K G+LPEL E
Sbjct: 241 VVGHDQEIQVREENVDIFTTSSKMEEDMDFWYNVFIKTGDLPELPE 267

[Close]
BLAST of CmoCh08G002890 vs. TrEMBL
Match: A0A0V0HMD9_SOLCH (Putative myb-related protein Myb4-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.2e-56
Identity = 127/287 (44.25%), Postives = 167/287 (58.19%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           MGRAPCCEK+GLK+GPWSP+ED ILI +IQ NGHSNWRALPK AGL              
Sbjct: 1   MGRAPCCEKMGLKKGPWSPEEDNILITYIQNNGHSNWRALPKLAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRW NYLRPD+KRG+FT+EEE+TII LH+ LGNRWS IAA+LPGRTD
Sbjct: 61  -----LRCGKSCRLRWTNYLRPDIKRGNFTKEEEDTIIKLHENLGNRWSAIAARLPGRTD 120

Query: 124 NEIKNVWHTSLKKRLNQ---SQTREDHTELN--KNDIPFRDQPPCSLDIKSDGEENVDRC 183
           NEIKN+WHT+LKK+L     SQ  + H+++N   N  P   +   + D  ++   +  + 
Sbjct: 121 NEIKNIWHTNLKKKLKNYQPSQNSKRHSKINHVSNKGPTASESSNNSDFSTNNSTSTKQH 180

Query: 184 TK---NNDDGKDTKLEELAFAKDFLENLF--------SEEEIFPNNCDMIKNDDQS---- 243
            K   N+     +++  +    D  + +         S  E FP   +    D+ S    
Sbjct: 181 IKIAPNSPQLSSSEISSVTLVVDDNQMVIIKEEKIESSSSEYFPKIDESFWTDELSTENN 240

Query: 244 -----PKDVEISSDTVDI----------MDFWRGVFMKDGELPELQE 256
                 +++++  + VDI          MDFW  VF+K G+LPEL E
Sbjct: 241 MVVGHDQEIQVREENVDIFTTSSKMEEDMDFWYNVFIKTGDLPELPE 268

[Close]
BLAST of CmoCh08G002890 vs. TAIR10
Match: AT3G23250.1 (AT3G23250.1 myb domain protein 15)

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-55
Identity = 99/149 (66.44%), Postives = 114/149 (76.51%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           MGRAPCCEK+GLKRGPW+P+EDQIL+ FI  +GHSNWRALPK+AGL              
Sbjct: 1   MGRAPCCEKMGLKRGPWTPEEDQILVSFILNHGHSNWRALPKQAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRW+NYL+PD+KRG+FT+EEE+ II+LHQ+LGNRWS IAAKLPGRTD
Sbjct: 61  -----LRCGKSCRLRWMNYLKPDIKRGNFTKEEEDAIISLHQILGNRWSAIAAKLPGRTD 120

Query: 124 NEIKNVWHTSLKKRLNQSQTREDHTELNK 153
           NEIKNVWHT LKKRL   Q  +  T   K
Sbjct: 121 NEIKNVWHTHLKKRLEDYQPAKPKTSNKK 130

[Close]
BLAST of CmoCh08G002890 vs. TAIR10
Match: AT1G06180.1 (AT1G06180.1 myb domain protein 13)

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-54
Identity = 120/252 (47.62%), Postives = 154/252 (61.11%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           MGR PCCEK+GLK+GPWS +ED+ILI +I  +GH NWRALPK AGL              
Sbjct: 1   MGRRPCCEKIGLKKGPWSAEEDRILINYISLHGHPNWRALPKLAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRWINYLRPD+KRG+FT  EE+TII+LHQLLGNRWS IAAKLPGRTD
Sbjct: 61  -----LRCGKSCRLRWINYLRPDIKRGNFTPHEEDTIISLHQLLGNRWSAIAAKLPGRTD 120

Query: 124 NEIKNVWHTSLKKRLNQSQ---TREDHTELNKNDIPFRDQPPCSLDIKSDGEENVDRCTK 183
           NEIKNVWHT LKKRL+ SQ    +ED       ++P   Q   S    S  + +      
Sbjct: 121 NEIKNVWHTHLKKRLHHSQDQNNKEDFVSTTAAEMPTSPQQQSS----SSADISAITTLG 180

Query: 184 NNDDGKDTKLEELAFAKDFL----ENLFSEEEIFPNNCDMIKNDDQSPKDVEISSDTVD- 241
           NN+D  ++  +    ++D L    E+ +SE  +   +CD I  ++++ K +E    ++D 
Sbjct: 181 NNNDISNSNKDSATSSEDVLAIIDESFWSEVVLM--DCD-ISGNEKNEKKIENWEGSLDR 226

[Close]
BLAST of CmoCh08G002890 vs. TAIR10
Match: AT2G31180.1 (AT2G31180.1 myb domain protein 14)

HSP 1 Score: 205.7 bits (522), Expect = 3.5e-53
Identity = 115/269 (42.75%), Postives = 155/269 (57.62%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           MGRAPCCEK+G+KRGPW+P+EDQILI +I   GHSNWRALPK AGL              
Sbjct: 1   MGRAPCCEKMGVKRGPWTPEEDQILINYIHLYGHSNWRALPKHAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRWINYLRPD+KRG+FT +EE+TIINLH+ LGNRWS IAAKLPGRTD
Sbjct: 61  -----LRCGKSCRLRWINYLRPDIKRGNFTPQEEQTIINLHESLGNRWSAIAAKLPGRTD 120

Query: 124 NEIKNVWHTSLKKRLNQSQTREDHTELNKNDIPFRDQPPCSLDIKSDGEENVDRCTKNND 183
           NEIKNVWHT LKKRL+++      T+         ++   S+ + +   +         D
Sbjct: 121 NEIKNVWHTHLKKRLSKNLNNGGDTKDVNGINETTNEDKGSVIVDTASLQQFSNSITTFD 180

Query: 184 DGKDTKLEELAFAKDFLENLFSEEEIFPNNCDMIKNDDQSPKDVEISSDTV--------- 243
              D K + +++  + +  L   ++ F ++   + N +++ K +E     +         
Sbjct: 181 ISNDNKDDIMSY--EDISALI--DDSFWSDVISVDNSNKNEKKIEDWEGLIDRNSKKCSY 240

Query: 244 -------DIMDFWRGVFMKDGELPELQEI 257
                  D M+FW  VF  +  + E  +I
Sbjct: 241 SNSKLYNDDMEFWFDVFTSNRRIEEFSDI 246

[Close]
BLAST of CmoCh08G002890 vs. TAIR10
Match: AT1G79180.1 (AT1G79180.1 myb domain protein 63)

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-50
Identity = 119/256 (46.48%), Postives = 147/256 (57.42%), Query Frame = 1 

Query: 5   GRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRFV 64
           GRAPCC+K  +KRGPWSP+ED  LI FIQ+ GH NWR+LPK++GL               
Sbjct: 4   GRAPCCDKTKVKRGPWSPEEDIKLISFIQKFGHENWRSLPKQSGL--------------- 63

Query: 65  FYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTDN 124
               LRCGKSCRLRWINYLRPDLKRG+FT EEEETII LH   GN+WS IA++LPGRTDN
Sbjct: 64  ----LRCGKSCRLRWINYLRPDLKRGNFTSEEEETIIKLHHNYGNKWSKIASQLPGRTDN 123

Query: 125 EIKNVWHTSLKKRLNQSQTREDHTELNKNDIPFRDQPPCSLDIKSDG--------EENVD 184
           EIKNVWHT LKKRL QS    D               PCS D  S G        E++++
Sbjct: 124 EIKNVWHTHLKKRLAQSSGTAD-----------EPASPCSSDSVSRGKDDKSSHVEDSLN 183

Query: 185 RCTKNNDD------------GKDTKLEELAFAKDFLENLFSEEEIFPNNCDMIKNDDQSP 240
           R T + ++              D K++EL F  +++E  +SE        D+I  +   P
Sbjct: 184 RETNHRNELSTSMSSGGSNQQDDPKIDELRF--EYIEEAYSEFN------DIIIQEVDKP 221

[Close]
BLAST of CmoCh08G002890 vs. TAIR10
Match: AT1G56160.1 (AT1G56160.1 myb domain protein 72)

HSP 1 Score: 188.7 bits (478), Expect = 4.4e-48
Identity = 88/139 (63.31%), Postives = 104/139 (74.82%), Query Frame = 1 

Query: 5   GRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRFV 64
           GRAPCC+K  +KRGPWSPQED  LI FIQ++GH NWR+LPK AGL               
Sbjct: 4   GRAPCCDKNKVKRGPWSPQEDLTLITFIQKHGHQNWRSLPKLAGL--------------- 63

Query: 65  FYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTDN 124
               LRCGKSCRLRWINYLRPD+KRG+F+++EE+ II+ HQ LGN+WS IA+ LPGRTDN
Sbjct: 64  ----LRCGKSCRLRWINYLRPDVKRGNFSKKEEDAIIHYHQTLGNKWSKIASFLPGRTDN 123

Query: 125 EIKNVWHTSLKKRLNQSQT 144
           EIKNVW+T LKKRL  S +
Sbjct: 124 EIKNVWNTHLKKRLTPSSS 123

[Close]
BLAST of CmoCh08G002890 vs. NCBI nr
Match: gi|659100752|ref|XP_008451250.1| (PREDICTED: myb-related protein Myb4-like [Cucumis melo])

HSP 1 Score: 337.8 bits (865), Expect = 1.7e-89
Identity = 181/276 (65.58%), Postives = 204/276 (73.91%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           MGRAPCCEKVGLKRGPWS +EDQILIKFIQ NGHSNWRALPK+AGL              
Sbjct: 1   MGRAPCCEKVGLKRGPWSFEEDQILIKFIQLNGHSNWRALPKKAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRW NYLRPD+KRGDFT EEE+TIINLH LLGNRW+ IAA+LPGRTD
Sbjct: 61  -----LRCGKSCRLRWTNYLRPDIKRGDFTHEEEQTIINLHHLLGNRWAAIAARLPGRTD 120

Query: 124 NEIKNVWHTSLKKRL-NQSQTREDHTELNKN-DIPFRDQPPCSLDIKSD-GEENVDRCTK 183
           NEIKNVWHT LKKR+ NQ++T +D T+ NKN D    DQP CS  IK D GEE++DRCTK
Sbjct: 121 NEIKNVWHTHLKKRVTNQNETLKDQTKQNKNDDNNLYDQPFCSSKIKLDIGEEDIDRCTK 180

Query: 184 NNDDGKDTKLEELAFAKDFLENLFSEEEIFPN-------NCDMIKNDDQSPKDVEI---- 243
           NN+D KDT+L ELA A+DFL +L S+EE F N       +C M+K+ D+SPK+VEI    
Sbjct: 181 NNNDDKDTELVELALAEDFLNSLLSDEEFFENDWNNLGKDCAMVKDVDESPKEVEIPLSG 240

Query: 244 -------SSDTVDIMDFWRGVFMKDGELPELQEINI 259
                  SSDTVDIMDFWR VFM DG   ELQEINI
Sbjct: 241 EEMSNCSSSDTVDIMDFWRNVFMNDG---ELQEINI 254

[Close]
BLAST of CmoCh08G002890 vs. NCBI nr
Match: gi|449462489|ref|XP_004148973.1| (PREDICTED: myb-related protein Myb4 [Cucumis sativus])

HSP 1 Score: 331.3 bits (848), Expect = 1.6e-87
Identity = 177/276 (64.13%), Postives = 202/276 (73.19%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           MGRAPCCEKVGLKRGPWS +EDQILIKFIQ NGHSNWRALPK+AGL              
Sbjct: 1   MGRAPCCEKVGLKRGPWSFEEDQILIKFIQLNGHSNWRALPKKAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRW NYLRPD+KRGDFT+EE +TII LHQL+GNRW+ IAA+LPGRTD
Sbjct: 61  -----LRCGKSCRLRWTNYLRPDIKRGDFTQEEAQTIITLHQLMGNRWAAIAARLPGRTD 120

Query: 124 NEIKNVWHTSLKKRLNQSQTREDHTELNKN-DIPFRDQPPCSLDIKSDGEENVDRCTKNN 183
           NEIKNVWHT LKKR+ Q++  +D T+ NKN D  F DQ  CS +IK DGEE++DRC KNN
Sbjct: 121 NEIKNVWHTHLKKRVIQNEILKDQTKQNKNDDNHFHDQLSCSSEIKLDGEEDIDRCIKNN 180

Query: 184 DDGKDTKLEELAFAKDFLENLFSEEEIFPN-------NCDMIKN-DDQSPKDVEI----- 243
           +D KD +L ELAFA+DFL++L  EEE   N       +C MIK+  D+SPK+VEI     
Sbjct: 181 NDDKDAELAELAFAEDFLKSLLLEEEFSENDWNNLGKDCVMIKDVVDESPKEVEIPLSGE 240

Query: 244 -------SSDTVDIMDFWRGVFMKDGELPELQEINI 259
                  SSDTVDIMDFWR VFMKDG   ELQEINI
Sbjct: 241 EEMSNCSSSDTVDIMDFWRNVFMKDG---ELQEINI 254

[Close]
BLAST of CmoCh08G002890 vs. NCBI nr
Match: gi|914408367|gb|AKV71950.1| (R2R3-MYB protein [Rehmannia glutinosa])

HSP 1 Score: 242.7 bits (618), Expect = 7.3e-61
Identity = 132/273 (48.35%), Postives = 183/273 (67.03%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           M RAPCCEK+GLK+GPWSP+EDQIL+ FIQQNGH NWRALPK+AGL              
Sbjct: 1   MVRAPCCEKMGLKKGPWSPEEDQILVSFIQQNGHGNWRALPKQAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRW NYLRPD+KRG+F++EEEETIINLH++LGNRWS IAA+LPGRTD
Sbjct: 61  -----LRCGKSCRLRWTNYLRPDIKRGNFSKEEEETIINLHEMLGNRWSAIAARLPGRTD 120

Query: 124 NEIKNVWHTSLKKRLNQSQTREDHTELNKNDIPFRDQPPCSLDIKSDGEENV----DRC- 183
           NEIKNVWHT LKK+L   Q+ +D    + N IP  D  P  L+  S+ ++N+     +C 
Sbjct: 121 NEIKNVWHTHLKKKLKIHQSSQDSKRHSINPIPKCD--PKVLE-NSNSDQNIVTSPQQCS 180

Query: 184 ------TKNNDDGKDTKLEELAFAKDFL----ENLFSEE----EIFPNNCDMIKNDDQSP 243
                 T ++ + K+ K EE+ ++ ++     E+ +SEE    +++  + D  +++D+ P
Sbjct: 181 SEMSSVTDSSIEKKEVKNEEMDYSSEYFPQIDESFWSEELSKDDVYCPSADKTEDEDRFP 240

Query: 244 --KDVEISSDTVDIMDFWRGVFMKDGELPELQE 256
             ++VE  + + D MDFW  +F++ G++P+L E
Sbjct: 241 FMQNVE-DARSDDSMDFWYNLFIRAGDMPDLPE 250

[Close]
BLAST of CmoCh08G002890 vs. NCBI nr
Match: gi|747087538|ref|XP_011091315.1| (PREDICTED: myb-related protein Myb4-like [Sesamum indicum])

HSP 1 Score: 228.0 bits (580), Expect = 1.9e-56
Identity = 124/274 (45.26%), Postives = 165/274 (60.22%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           M RAPCCEK+GLK+GPWSP+EDQIL+ +IQQ+GH NWRALPK+AGL              
Sbjct: 1   MVRAPCCEKMGLKKGPWSPEEDQILVSYIQQHGHGNWRALPKQAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRW NYLRPD+KRG+FT++EE+TII LHQ LGNRWS IAA+LPGRTD
Sbjct: 61  -----LRCGKSCRLRWTNYLRPDIKRGNFTKQEEDTIITLHQCLGNRWSAIAARLPGRTD 120

Query: 124 NEIKNVWHTSLKKRLNQSQTREDHTELNKNDIPFRDQPPCSLDI--KSDGEENV----DR 183
           NEIKNVWHT LKK+L   Q+ +D         P    P C   +   S+ ++NV     +
Sbjct: 121 NEIKNVWHTHLKKKLKNDQSSQD-----SKSHPIVSIPKCDSKVLENSNLDKNVVTSPQQ 180

Query: 184 CTKNNDDGKDTKL-------EELAFAKDF---LENLFSEEEIFPNNCDMIKNDDQ----- 243
           C+       D+ L       EE+ ++ ++   ++  F  EE+   + D    D++     
Sbjct: 181 CSSEMSSVTDSSLEKTVVKNEEMDYSSEYFPQIDESFWSEELSREDADRQTADEKIQFQF 240

Query: 244 -SPKDVEISSDTVDIMDFWRGVFMKDGELPELQE 256
              +  E  S   D MDFW  +F++ G++P+L E
Sbjct: 241 PGVEGAEKDSRIDDSMDFWYNLFIRAGDMPDLPE 250

[Close]
BLAST of CmoCh08G002890 vs. NCBI nr
Match: gi|565368096|ref|XP_006350689.1| (PREDICTED: myb-related protein Myb4-like [Solanum tuberosum])

HSP 1 Score: 228.0 bits (580), Expect = 1.9e-56
Identity = 126/286 (44.06%), Postives = 162/286 (56.64%), Query Frame = 1 

Query: 4   MGRAPCCEKVGLKRGPWSPQEDQILIKFIQQNGHSNWRALPKRAGLYLICKTHYVNSLRF 63
           MGRAPCCEK+GLK+GPWSP+ED ILI +IQ NGHSNWRALPK AGL              
Sbjct: 1   MGRAPCCEKMGLKKGPWSPEEDNILISYIQNNGHSNWRALPKLAGL-------------- 60

Query: 64  VFYRLLRCGKSCRLRWINYLRPDLKRGDFTREEEETIINLHQLLGNRWSMIAAKLPGRTD 123
                LRCGKSCRLRW NYLRPD+KRG+FT+EEE+TII LH+ LGNRWS IAA+LPGRTD
Sbjct: 61  -----LRCGKSCRLRWTNYLRPDIKRGNFTKEEEDTIIKLHENLGNRWSAIAARLPGRTD 120

Query: 124 NEIKNVWHTSLKKRLNQ---SQTREDHTEL----NKNDIPFRDQPPCSLDIKSDGEENVD 183
           NEIKN+WHT+LKK+L     SQ  + H+++    NK   P            S   +   
Sbjct: 121 NEIKNIWHTNLKKKLKNYQLSQNSKRHSKINHVSNKGPTPSESSNNSDFSTNSTSTKQHI 180

Query: 184 RCTKNNDDGKDTKLEELAFAKDFLENLF--------SEEEIFPNNCDMIKNDDQS----- 243
           +   N+     +++  +    D  + +         S  E FP   +    D+ S     
Sbjct: 181 KIAPNSPQLSSSEMSSVTLVVDDNQMVIIKEEKIESSSSEYFPKIDESFWTDELSTENNM 240

Query: 244 ----PKDVEISSDTVDI----------MDFWRGVFMKDGELPELQE 256
                +++++  + VDI          MDFW  VF+K G+LPEL E
Sbjct: 241 VVGHDQEIQVREENVDIFTTSSKMEEDMDFWYNVFIKTGDLPELPE 267

The following BLAST results are available for this feature:
BLAST of CmoCh08G002890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB4_ORYSJ7.3e-5368.38Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2[more]
MYB1_MAIZE2.4e-4865.25Myb-related protein Zm1 OS=Zea mays PE=2 SV=1[more]
MYB2_PHYPA6.2e-4458.33Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1[more]
MYB12_ARATH3.1e-4359.56Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1[more]
MYB5_ARATH2.0e-4253.69Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1[more]
BLAST of CmoCh08G002890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAA1_CUCSA1.1e-8764.13Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375780 PE=4 SV=1[more]
A0A0K1SB66_REHGL5.1e-6148.35R2R3-MYB protein OS=Rehmannia glutinosa GN=MYB11 PE=2 SV=1[more]
Q40174_SOLLC1.3e-5643.66THM18 protein OS=Solanum lycopersicum GN=THM18 PE=2 SV=1[more]
M1BCC5_SOLTU1.3e-5644.06Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400016292 PE=4 SV=1[more]
A0A0V0HMD9_SOLCH2.2e-5644.25Putative myb-related protein Myb4-like OS=Solanum chacoense PE=4 SV=1[more]
BLAST of CmoCh08G002890 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G23250.11.7e-5566.44 myb domain protein 15[more]
AT1G06180.11.4e-5447.62 myb domain protein 13[more]
AT2G31180.13.5e-5342.75 myb domain protein 14[more]
AT1G79180.11.6e-5046.48 myb domain protein 63[more]
AT1G56160.14.4e-4863.31 myb domain protein 72[more]
BLAST of CmoCh08G002890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659100752|ref|XP_008451250.1|1.7e-8965.58PREDICTED: myb-related protein Myb4-like [Cucumis melo][more]
gi|449462489|ref|XP_004148973.1|1.6e-8764.13PREDICTED: myb-related protein Myb4 [Cucumis sativus][more]
gi|914408367|gb|AKV71950.1|7.3e-6148.35R2R3-MYB protein [Rehmannia glutinosa][more]
gi|747087538|ref|XP_011091315.1|1.9e-5645.26PREDICTED: myb-related protein Myb4-like [Sesamum indicum][more]
gi|565368096|ref|XP_006350689.1|1.9e-5644.06PREDICTED: myb-related protein Myb4-like [Solanum tuberosum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017877Myb-like_dom
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G002890.1CmoCh08G002890.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 89..132
score: 3.1E-13coord: 17..83
score: 5.3
IPR001005SANT/Myb domainSMARTSM00717santcoord: 16..85
score: 1.2E-9coord: 88..136
score: 5.9
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 18..90
score: 1.4E-21coord: 91..139
score: 1.8
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 14..130
score: 1.16
IPR017877Myb-like domainPROFILEPS50090MYB_LIKEcoord: 12..83
score: 10
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 84..138
score: 24
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 68..155
score: 7.1E-96coord: 4..48
score: 7.1
NoneNo IPR availablePANTHERPTHR10641:SF523SUBFAMILY NOT NAMEDcoord: 68..155
score: 7.1E-96coord: 4..48
score: 7.1