CmoCh08G002110 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCTCACTCAAATGCAATTTCCACCGATTGAATCACTCACCAAAACCCACCATCGGTACTTCCTTCACTTTCCCCCTTTCTCCTCATGTTTCAATTTGTCGTTTTTTCACCTCTGAGAATGCTTCCTGTTTTTGGTGAAAATTTTGATCAGACAGCCTCGATTGTTGTGAAGCCGCGATATCTTTCGTTTTCGGCCAACACCAGGCAAGAACGAGGCGAAACGAGCTGAGGTTTGTTTTAATAACATGCAATGCAATTACTTAATGTTTGCACTATGTTTTTGCTTTTATGTTGGGCATAAATCATGGTCAATACTTGGTTTCTATGGTTTTTTACTCATAATTAGACTATTCTTTCTGGAATCTATGATTTTCATAGCCATAGAGTGATAGGGCATATGCCATTGAGGGGGATGATCACACAACGCCATGAGAATTAATACGCAAGTGATAGAGCATATGTTTATATGATTAGATGCATGTACTTTTTCAAGGTGGCACGTAGCTTGGATTAAATTCTTGTTTGATTATTATTTTGAATTCAGTTGCTATAGATGATGGTCTTCATTTTTTTGCACTTGGTCCTTTCACATTTTATGTCTTCAATAATCTCACTTTATTACAGGTAACTTTTTGTTGCTTCGATGGAGCCATGGTCATAAATTGACTTTTATCAACGATCGATCATACGTACAGTTCACGGCATCTATGTTCTCATCTCTGCATAGAGCCAGAACCAGAACAAACATGCATTTTTTCCCAAGGAGTTTTGCCACTGCTGCATCCCCTCTTGTTCCAATGCAACTCCCTTCTAAAATGTATGAGCATTTGTCATTATGGATAATATATATGCAAGATCCCACATCGATTGGAGAGGGGAATGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCATTTTAAACCGAGAGGCTGACAGTGATACATAACAGGCCGAAGCGGACAATATCTACTAGTGGTGGCTTGGGCTGTTCTAATTTAAACGTGACTTGGGCTGTTACTGATGGTACATTTCAATGTTCAGTGGCCTATTGTTGTATAGTGCATGCATCATTTGGTGATTAGGTGGATCATGTAGCTTACAAGATTTCTCAGTATTTTAGAATGATCCCGACCGCCAAGATTTATTCTTTACTATTTCCTTGCTTTTCAGGGAAACCCATATCTGGTATATCTTACCTGATGAAGTAAAGAATAAAGATCTTCAAAATCATTATTTAAATCTACTCTCACCAAATGAAAAGGTGAATGTTATGAAAATACAAGAAGGGGAGCTTCAAAAAAGAGCCTTGCTAGCTCGTGCTTTGGTACGATCTACCCTTTCAAGATGTGAGTCCTTTTATTGTTATTTCATTTGTAATGTTTATACTTGCACGATGAAAACTTTTTGGCACTGGGCAGGTGTTAGACTCTCATTGTGTTACCACTTAGTAGAGTCCTGTGTTTTTAATAAACAGTCACTACCCCTAGTATGTGCCGCTTTCCTAATCAAAAGATTGGAGAGCACCCTTTCAGCGGATTTGGGCGCTCTAGCCAAAACGAATCCTTTCGGCTTGAGATTTGAAAATGAAAATGAAAGAGTATAGTGGGGCATGGCGATATTTACCATATATTTTAAATATGACGTGCAAGTTTCTTTTTGCTGTTATGCCTGAAATATGCTATTTTCTTCCTAGATGTTACACATTGTCAAATTGATCCACAAGCCTTGAAGTTTAAAAAGAATAAGTTTGGGAAGCCTGAGGTGATATCTTTTCCTTTTTTTCATTTATTTACTGTTTACATTCGACTTTTCTCGAGGTTCTGTGTAACTTCGCGTTCTCTTCGGTTTTTGTTTTTCCATTTGTTCATATTTATATAATTGTTGAATAGTTAGATTTGCGAATTAGCAGTGAACTGTGTCTACCACCATTGCAATTCAACATCTCACATTCTTCATCCTTAATAGCCTGTGGAGTGACTATGAATTCTCCAGTAAGTGTCTACTTTACATGCTACATTTTCTACTTCTGCAATATCTTCTTTGGATTTGTAGTGAGTAAATGATTTCAATTGTTAAACATAATTAACTTGTGTGATTTCTAATTCAGATTGGTATTGATGTGGAAGAGAAGACACGAAAAATAAGGAACAACATCATAGCTTTTGCTAAACGTTTCTTTTCTCCAAATGAAATAGAAGTTTTATCTGCTATTTCAGATCCTGAAATCCAGCGGCAGGAATTCATCAAATTATGGACTCTGAAGGTGAGTTGCAATAGCGTCCATGACGTATCAATTTTCTACTTGCAATTGCATTTGAGATCTTAGGCACGTCTGGAAAGCATATTATGTCAATATTGTCCTCTTTGGGCTTTTCCTTCTGAGCTTCCCTTCAAGGTTTTAAAACGTAAAATGCGTGTACTACTAGGGGAGAGGTTTCCACATCCTTACAAGAAATGTTTCATTCCCCTCTTCAATCGATGTGGGGATCTCAGAATCTACCTCCCTTCAGGGTCCAGTGTCTTCGCTCGCACTCGTTCCCTTCTCCAATCGATGTGGGACCTCCCAATCCACACACCTTCAGGACTCAACGTCCTTGTTGGCAAACTGCCTCGTGTCCCTCCCCTTTGGGGCTCAGCCTCCTCGCTAGCACATCGCCCGTTGTCTGGCTCTAATACCATTTGTAACCGCCCAAACCCACTGTAGGCAGACATTGTCCTCTTTGGGCTTTCGCTTTTGAGCTTCCCCTCAAAGTTTTAAAACGCGTCTACTAGAGAGGTTTTCACACCCTTATAAGAAATGTTTCGTTCTCCTCTCTAATCGATATTGGATCTCACATTCTTATTATTATTACCTCTAAAGTATATTCTCGATTTTTTTTCTTGTGTGCATGGTTGATTATGGGAAATTTCTGGTAGGTATAAAGTCACTTCATTTGCATTTGAAAATTTCTTCTCTTCCTTTTTATTGGTGTCTTCTCTTCCTTTTTATTGGTGTAAATTCATTTACTGAAACTTTTATAGGAGGCATATGTCAAAGCGTTGGGTAGGGGCTTCTCAGCTACTCCTTTCAAGACTTTCACTATTCGGTTTAACAGAACTGCTCGAGGTTCATGTCTTCCTGGGTGTGAAACTAATGAGAAGGTAAGCCATTCATCAAGACTCGAAGAAACTCTACAAGAGAAAAAACAGGGGAGATTCGAAATGGAATGTGAATCGTATATAGGCTTTACCAAATAAGCATGTAGCCAGCTTGTTGGGTTATTATTTTACAATGCTTTAAAGAATATGAACAACCATTTTTTCTTCATGGTTCTTGTACTACGAATTTCATAAATGGCTATGTTGTACCAGGCTTATGAAGTAAGTGTAGAGCCTCGTGATGATCCCGAAAACTGCTCAAGAAACGTGACATTTGCTTTGATGGAGTTGTCGGGTTCTCATTATGTTGCTGTTTGCATGAAAAAAGACGCGAATATTAGAGGTGAAGTTCACTTTTACAATATCAAACAGTAACACTTGGTGATTGATATAAGCTTATACTTCGGTATATTTACAGGAACAGCGAGTCTTCCCATGAAGTTGGATGTATGGAGAACAATTCCATACGTGGAGGATGAATGTGTTGCTGGAACTGAGGCTGTTTCACCAATAGTTGGCTTTGCTTAATGAAATGGAAAGTTCAAGATTCCACTCCAACTGGCCTGTAGATTCTTATATCAAAACGAAACAATTCTCTTAGAAATGTTGTTTGAAGTTCTAAGCTGTAAACTTGTCCAAAATTATGTAACAGAAACATTGAAAGGTGAAATGGTTTTGGAGTTGGGAGTCCTAAATGGCACCAAGGAGTTGTGATCTATTGATTTTGGCTTTTCTCATGGAGTTATGAACTATTGTTATTCATACACTGTCCATATTTTCAATGCTATGCTCTCGAGTC CTCCTCACTCAAATGCAATTTCCACCGATTGAATCACTCACCAAAACCCACCATCGACAGCCTCGATTGTTGTGAAGCCGCGATATCTTTCGTTTTCGGCCAACACCAGGCAAGAACGAGGCGAAACGAGCTGAGGTAACTTTTTGTTGCTTCGATGGAGCCATGGTCATAAATTGACTTTTATCAACGATCGATCATACGTACAGTTCACGGCATCTATGTTCTCATCTCTGCATAGAGCCAGAACCAGAACAAACATGCATTTTTTCCCAAGGAGTTTTGCCACTGCTGCATCCCCTCTTGTTCCAATGCAACTCCCTTCTAAAATGGAAACCCATATCTGGTATATCTTACCTGATGAAGTAAAGAATAAAGATCTTCAAAATCATTATTTAAATCTACTCTCACCAAATGAAAAGGTGAATGTTATGAAAATACAAGAAGGGGAGCTTCAAAAAAGAGCCTTGCTAGCTCGTGCTTTGGTACGATCTACCCTTTCAAGATATGTTACACATTGTCAAATTGATCCACAAGCCTTGAAGTTTAAAAAGAATAAGTTTGGGAAGCCTGAGTTAGATTTGCGAATTAGCAGTGAACTGTGTCTACCACCATTGCAATTCAACATCTCACATTCTTCATCCTTAATAGCCTGTGGAGTGACTATGAATTCTCCAATTGGTATTGATGTGGAAGAGAAGACACGAAAAATAAGGAACAACATCATAGCTTTTGCTAAACGTTTCTTTTCTCCAAATGAAATAGAAGTTTTATCTGCTATTTCAGATCCTGAAATCCAGCGGCAGGAATTCATCAAATTATGGACTCTGAAGGAGGCATATGTCAAAGCGTTGGGTAGGGGCTTCTCAGCTACTCCTTTCAAGACTTTCACTATTCGGTTTAACAGAACTGCTCGAGGTTCATGTCTTCCTGGGTGTGAAACTAATGAGAAGGCTTATGAAGTAAGTGTAGAGCCTCGTGATGATCCCGAAAACTGCTCAAGAAACGTGACATTTGCTTTGATGGAGTTGTCGGGTTCTCATTATGTTGCTGTTTGCATGAAAAAAGACGCGAATATTAGAGGAACAGCGAGTCTTCCCATGAAGTTGGATGTATGGAGAACAATTCCATACGTGGAGGATGAATGTGTTGCTGGAACTGAGGCTGTTTCACCAATAGTTGGCTTTGCTTAATGAAATGGAAAGTTCAAGATTCCACTCCAACTGGCCTGTAGATTCTTATATCAAAACGAAACAATTCTCTTAGAAATGTTGTTTGAAGTTCTAAGCTGTAAACTTGTCCAAAATTATGTAACAGAAACATTGAAAGGTGAAATGGTTTTGGAGTTGGGAGTCCTAAATGGCACCAAGGAGTTGTGATCTATTGATTTTGGCTTTTCTCATGGAGTTATGAACTATTGTTATTCATACACTGTCCATATTTTCAATGCTATGCTCTCGAGTC ATGTTCTCATCTCTGCATAGAGCCAGAACCAGAACAAACATGCATTTTTTCCCAAGGAGTTTTGCCACTGCTGCATCCCCTCTTGTTCCAATGCAACTCCCTTCTAAAATGGAAACCCATATCTGGTATATCTTACCTGATGAAGTAAAGAATAAAGATCTTCAAAATCATTATTTAAATCTACTCTCACCAAATGAAAAGGTGAATGTTATGAAAATACAAGAAGGGGAGCTTCAAAAAAGAGCCTTGCTAGCTCGTGCTTTGGTACGATCTACCCTTTCAAGATATGTTACACATTGTCAAATTGATCCACAAGCCTTGAAGTTTAAAAAGAATAAGTTTGGGAAGCCTGAGTTAGATTTGCGAATTAGCAGTGAACTGTGTCTACCACCATTGCAATTCAACATCTCACATTCTTCATCCTTAATAGCCTGTGGAGTGACTATGAATTCTCCAATTGGTATTGATGTGGAAGAGAAGACACGAAAAATAAGGAACAACATCATAGCTTTTGCTAAACGTTTCTTTTCTCCAAATGAAATAGAAGTTTTATCTGCTATTTCAGATCCTGAAATCCAGCGGCAGGAATTCATCAAATTATGGACTCTGAAGGAGGCATATGTCAAAGCGTTGGGTAGGGGCTTCTCAGCTACTCCTTTCAAGACTTTCACTATTCGGTTTAACAGAACTGCTCGAGGTTCATGTCTTCCTGGGTGTGAAACTAATGAGAAGGCTTATGAAGTAAGTGTAGAGCCTCGTGATGATCCCGAAAACTGCTCAAGAAACGTGACATTTGCTTTGATGGAGTTGTCGGGTTCTCATTATGTTGCTGTTTGCATGAAAAAAGACGCGAATATTAGAGGAACAGCGAGTCTTCCCATGAAGTTGGATGTATGGAGAACAATTCCATACGTGGAGGATGAATGTGTTGCTGGAACTGAGGCTGTTTCACCAATAGTTGGCTTTGCTTAA
BLAST of CmoCh08G002110 vs. Swiss-Prot
Match: LP14_BACIU (4'-phosphopantetheinyl transferase OS=Bacillus subtilis GN=lpa-14 PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 8.9e-16 Identity = 57/186 (30.65%), Postives = 92/186 (49.46%), Query Frame = 1
BLAST of CmoCh08G002110 vs. Swiss-Prot
Match: HETI_NOSS1 (4'-phosphopantetheinyl transferase HetI OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=hetI PE=3 SV=2) HSP 1 Score: 85.5 bits (210), Expect = 1.2e-15 Identity = 61/179 (34.08%), Postives = 95/179 (53.07%), Query Frame = 1
BLAST of CmoCh08G002110 vs. Swiss-Prot
Match: GSP_ANEMI (4'-phosphopantetheinyl transferase gsp OS=Aneurinibacillus migulanus GN=gsp PE=3 SV=2) HSP 1 Score: 82.8 bits (203), Expect = 7.5e-15 Identity = 59/200 (29.50%), Postives = 103/200 (51.50%), Query Frame = 1
BLAST of CmoCh08G002110 vs. Swiss-Prot
Match: Y495_SYNY3 (Putative 4'-phosphopantetheinyl transferase slr0495 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0495 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.1e-12 Identity = 55/161 (34.16%), Postives = 86/161 (53.42%), Query Frame = 1
BLAST of CmoCh08G002110 vs. Swiss-Prot
Match: ADPPT_MOUSE (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Mus musculus GN=Aasdhppt PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.5e-07 Identity = 58/235 (24.68%), Postives = 94/235 (40.00%), Query Frame = 1
BLAST of CmoCh08G002110 vs. TrEMBL
Match: A0A0A0KCD0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G042310 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 1.9e-145 Identity = 261/310 (84.19%), Postives = 282/310 (90.97%), Query Frame = 1
BLAST of CmoCh08G002110 vs. TrEMBL
Match: V4S7F2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011946mg PE=4 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 3.9e-103 Identity = 185/310 (59.68%), Postives = 240/310 (77.42%), Query Frame = 1
BLAST of CmoCh08G002110 vs. TrEMBL
Match: A0A067G427_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020190mg PE=4 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 2.5e-102 Identity = 183/310 (59.03%), Postives = 239/310 (77.10%), Query Frame = 1
BLAST of CmoCh08G002110 vs. TrEMBL
Match: A0A0D2NS54_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G239100 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 6.3e-101 Identity = 187/311 (60.13%), Postives = 245/311 (78.78%), Query Frame = 1
BLAST of CmoCh08G002110 vs. TrEMBL
Match: A0A151RRT2_CAJCA (4'-phosphopantetheinyl transferase OS=Cajanus cajan GN=KK1_033199 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 1.5e-99 Identity = 180/323 (55.73%), Postives = 245/323 (75.85%), Query Frame = 1
BLAST of CmoCh08G002110 vs. TAIR10
Match: AT3G11470.2 (AT3G11470.2 4'-phosphopantetheinyl transferase superfamily) HSP 1 Score: 301.6 bits (771), Expect = 5.8e-82 Identity = 151/294 (51.36%), Postives = 210/294 (71.43%), Query Frame = 1
BLAST of CmoCh08G002110 vs. TAIR10
Match: AT2G02770.1 (AT2G02770.1 4'-phosphopantetheinyl transferase superfamily) HSP 1 Score: 245.7 bits (626), Expect = 3.8e-65 Identity = 124/280 (44.29%), Postives = 179/280 (63.93%), Query Frame = 1
BLAST of CmoCh08G002110 vs. NCBI nr
Match: gi|778710245|ref|XP_011656544.1| (PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase isoform X1 [Cucumis sativus]) HSP 1 Score: 532.7 bits (1371), Expect = 4.4e-148 Identity = 269/323 (83.28%), Postives = 291/323 (90.09%), Query Frame = 1
BLAST of CmoCh08G002110 vs. NCBI nr
Match: gi|659089866|ref|XP_008445723.1| (PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase isoform X1 [Cucumis melo]) HSP 1 Score: 527.3 bits (1357), Expect = 1.8e-146 Identity = 267/323 (82.66%), Postives = 286/323 (88.54%), Query Frame = 1
BLAST of CmoCh08G002110 vs. NCBI nr
Match: gi|700190793|gb|KGN45997.1| (hypothetical protein Csa_6G042310 [Cucumis sativus]) HSP 1 Score: 523.5 bits (1347), Expect = 2.7e-145 Identity = 261/310 (84.19%), Postives = 282/310 (90.97%), Query Frame = 1
BLAST of CmoCh08G002110 vs. NCBI nr
Match: gi|659089872|ref|XP_008445726.1| (PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase isoform X2 [Cucumis melo]) HSP 1 Score: 517.7 bits (1332), Expect = 1.5e-143 Identity = 260/310 (83.87%), Postives = 279/310 (90.00%), Query Frame = 1
BLAST of CmoCh08G002110 vs. NCBI nr
Match: gi|659089878|ref|XP_008445729.1| (PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase isoform X3 [Cucumis melo]) HSP 1 Score: 427.2 bits (1097), Expect = 2.6e-116 Identity = 214/253 (84.58%), Postives = 229/253 (90.51%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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