CmoCh08G002030 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G002030
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Hfr-2-like protein
Location	Cmo_Chr08 : 1187421 .. 1188606 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAAAGATGGATTTTTTAAGAGAAGGATTAGACACAAAATTAAACGCTTAATTATTTTAACAAGTACTGGACTAGTTGGGCGTGTGACAAACATTTTATTGTAGCGGGAGTTGACAAGAAAGAAGAAGACAAATCCAAATGGTCGTGCACACTATTTCGTCCCGTTTATGACAGTTCTCATCAATCATTTTGATTTTGTCACGTTGGTCTTGATTTTAACGTAGTCGTATGGAGAGTTGGTTCTCCTTATGGAGGATGTTTATGTGCACAATGGTCGGTTTCTAATAGAGATCTCTGCGATCTCAGTATAGTTATTAACTGGAAACTACTGTGGTCATTACCTAAATTTATTGCTTTTAAAGGTGATAATAGTTCTTATCTTAGTGCTCGTTCAATTGACAATAGTCCATATCTACAATTTTCATCCAATAAATTGACGATCCTGCCATTCAGATGAAGACTTTCATCTCAAATGATGAAAAAATTTGCATCAAGTCAGTTTACTTCCAAAATTTTTAGAGACGTGACGCTTCTAATTGAATTTTTGTTGAATAATGTGAGACCACTACTCAAAATCTCGATACTTTATTTTTGCCCACTAAAGTTTCACCCGATGTTGTTGCTCTTTGTAACTTGGGTAATGACAAGATATACTATAGGCGTGAAAAATATTGATGAATTTTCACGCTTACATATGGTTGAGCTTGTTCTTTCATGACAAATCAACAATGTCGTATTTTGTCTTTTTGATGCTAGGATCCATGATCAAGTTGTTATCGTATTAGCAACTACAGAAGTTGCAAATAATTCGAACGTACCCAATACTGAATGTGTGACTTTCTCATACACAAACAATGGATCGAGCACATGGGCTTCTTCAGTCTCAACAAAATTGGACGTCAAGACAACGATCGAAGCAAATATTCCGCTCATTGTTGATGGAAAGATGATTGAAACATCGTCAGCTAAGTTTGTAAGACTCAAGAGATGGTATATGAGGTTACTATACCACCATTGAGCACTATCAACGTTACTTTATGTGTAACCAAGGGCTCGTGTGACGTTCCGTTCTCATACCAACAAGTTGACGTCCTCAGAGGTGGGAAAAAAGTTGAATATTCTTTAAACGGTATTTACTATGGCACCAACTACTATAAAACTAAAACTAAGTCAATATGTTGA

mRNA sequence

ATGGACAAAGATGGATTTTTTAAGAGAAGGATTAGACACAAAATTAAACGCTTAATTATTTTAACAAGTACTGGACTAGTTGGGCGTCGGGAGTTGACAAGAAAGAAGAAGACAAATCCAAATGGTCGTGCACACTATTTCGTCCCGTTTATGACAGTTCTCATCAATCATTTTGATTTTGTCACGTTGTCGTATGGAGAGTTGGTTCTCCTTATGGAGGATGTTTATGTGCACAATGGTCGGTTTCTAATAGAGATCTCTGCGATCTCATTATTAACTGGAAACTACTGTGGTCATTACCTAAATTTATTGCTTTTAAAGATGAAGACTTTCATCTCAAATGATGAAAAAATTTGCATCAAGATCCATGATCAAGTTGTTATCGTATTAGCAACTACAGAAGTTGCAAATAATTCGAACGTACCCAATACTGAATGTGTGACTTTCTCATACACAAACAATGGATCGAGCACATGGGCTTCTTCAGTCTCAACAAAATTGGACGTCAAGACAACGATCGAAGCAAATATTCCGCTCATTGTTGATGGAAAGATGATTGAAACATCGTCAGCTAAGTTTACTCAAGAGATGGTATATGAGGTTACTATACCACCATTGAGCACTATCAACGTTACTTTATGTGTAACCAAGGGCTCGTGTGACGTTCCGTTCTCATACCAACAAGTTGACGTCCTCAGAGGTGGGAAAAAAGTTGAATATTCTTTAAACGGTATTTACTATGGCACCAACTACTATAAAACTAAAACTAAGTCAATATGTTGA

Coding sequence (CDS)

ATGGACAAAGATGGATTTTTTAAGAGAAGGATTAGACACAAAATTAAACGCTTAATTATTTTAACAAGTACTGGACTAGTTGGGCGTCGGGAGTTGACAAGAAAGAAGAAGACAAATCCAAATGGTCGTGCACACTATTTCGTCCCGTTTATGACAGTTCTCATCAATCATTTTGATTTTGTCACGTTGTCGTATGGAGAGTTGGTTCTCCTTATGGAGGATGTTTATGTGCACAATGGTCGGTTTCTAATAGAGATCTCTGCGATCTCATTATTAACTGGAAACTACTGTGGTCATTACCTAAATTTATTGCTTTTAAAGATGAAGACTTTCATCTCAAATGATGAAAAAATTTGCATCAAGATCCATGATCAAGTTGTTATCGTATTAGCAACTACAGAAGTTGCAAATAATTCGAACGTACCCAATACTGAATGTGTGACTTTCTCATACACAAACAATGGATCGAGCACATGGGCTTCTTCAGTCTCAACAAAATTGGACGTCAAGACAACGATCGAAGCAAATATTCCGCTCATTGTTGATGGAAAGATGATTGAAACATCGTCAGCTAAGTTTACTCAAGAGATGGTATATGAGGTTACTATACCACCATTGAGCACTATCAACGTTACTTTATGTGTAACCAAGGGCTCGTGTGACGTTCCGTTCTCATACCAACAAGTTGACGTCCTCAGAGGTGGGAAAAAAGTTGAATATTCTTTAAACGGTATTTACTATGGCACCAACTACTATAAAACTAAAACTAAGTCAATATGTTGA

Homology

[Close]

BLAST of CmoCh08G002030 vs. TrEMBL
Match: F6HZZ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06090 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.0e-21
Identity = 66/165 (40.00%), Postives = 93/165 (56.36%), Query Frame = 1


Query: 104 LLLKMKTFISNDEKICIKIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSV 163
           L+L    +  N   +  +I+DQ VIV+ T E  N ++ P+T+ V  SYT   SSTW  SV
Sbjct: 293 LVLSRNIYNVNFRLMDARIYDQSVIVMTTAEAINRTHEPHTQQVKLSYTETKSSTWKGSV 352

Query: 164 STKLDVKTTIEANIPLIVDGKMI------------ETSSAKFTQEMVYEVTIPPLSTINV 223
           S KL VK T+E+ +P I +GK+             ET S     E +Y VT+P ++ + V
Sbjct: 353 SLKLGVKITMESGVPFIANGKLEISSEFSGAYEWGETESVTTAMETMYNVTVPAMTRVTV 412

Query: 224 TLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTNYYKTK 256
           ++  TKGSCDVPFSY Q D L  GK V  ++ +G+Y G N +  K
Sbjct: 413 SMIGTKGSCDVPFSYTQRDTLTDGKIVVDNMDDGVYVGVNCFNVK 457

[Close]

BLAST of CmoCh08G002030 vs. TrEMBL
Match: D7U3H5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06000 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.2e-21
Identity = 64/165 (38.79%), Postives = 92/165 (55.76%), Query Frame = 1


Query: 104 LLLKMKTFISNDEKICIKIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSV 163
           L+L    +  N   +  +I+DQ VI++ T E  N ++ P+T+ V  SYT   S TW  SV
Sbjct: 293 LVLSRNIYNVNFRLMDARIYDQRVIIMTTGEAINMTHEPHTQQVKLSYTETKSRTWKGSV 352

Query: 164 STKLDVKTTIEANIPLIVDGKMI------------ETSSAKFTQEMVYEVTIPPLSTINV 223
           S KL VK T+E+ +P I DGK+              T S     E +Y VT+P ++ + V
Sbjct: 353 SLKLGVKITMESGVPFIADGKLEISSEFSGTYEWGGTESVTTAMETLYNVTVPAMTRVTV 412

Query: 224 TLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTNYYKTK 256
           ++  T+GSCDVPFSY Q D L  GK V Y++ +G+Y G N +  K
Sbjct: 413 SMIATQGSCDVPFSYSQRDTLTDGKNVIYNMDDGVYNGVNCFNVK 457

[Close]

BLAST of CmoCh08G002030 vs. TrEMBL
Match: F6HZZ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06110 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-20
Identity = 65/165 (39.39%), Postives = 90/165 (54.55%), Query Frame = 1


Query: 104 LLLKMKTFISNDEKICIKIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSV 163
           L+L    +  N   +  + +DQ VIV+ T E  N +   +T+ V  SYT   S TW  SV
Sbjct: 293 LVLSRNIYNVNFRLMDARTYDQRVIVMTTGEAINMTQELHTQQVKLSYTETKSRTWKGSV 352

Query: 164 STKLDVKTTIEANIPLIVDGKMI------------ETSSAKFTQEMVYEVTIPPLSTINV 223
           S KL VK T+E+ +P I DGK+             ET S     E VY VT+P ++ + V
Sbjct: 353 SLKLGVKMTMESGVPFIADGKLEISSEFSGTYEWGETESVTTAMETVYNVTVPAMTKVTV 412

Query: 224 TLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTNYYKTK 256
           ++  T+GSCDVPFSY Q D L  GK V Y++ +G+Y G N +  K
Sbjct: 413 SMIATQGSCDVPFSYTQHDTLTDGKNVVYNMDDGVYVGVNCFNVK 457

[Close]

BLAST of CmoCh08G002030 vs. TrEMBL
Match: D7U3H9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06060 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.6e-20
Identity = 67/175 (38.29%), Postives = 94/175 (53.71%), Query Frame = 1


Query: 104 LLLKMKTFISNDEKICIKIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSV 163
           L+L    +  N   +  +I+DQ VIV+ T    N +  P+T+ V  SYT   S TW  SV
Sbjct: 293 LVLSRNIYNVNFRLMDARIYDQRVIVMTTGGAINMTQEPHTQQVKLSYTETNSRTWKGSV 352

Query: 164 STKLDVKTTIEANIPLIVDGKMI--------------ETSSAKFTQEMVYEVTIPPLSTI 223
           S K  VK TIE+ +P I DGK+               ET S    +E VY VT+P  + +
Sbjct: 353 SLKSGVKITIESGVPFIADGKLEVSSEFSGTGTYEWGETESLTTAKETVYSVTVPARTRV 412

Query: 224 NVTLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTN----YYKTKTKSI 260
            +++  T+GSCDVPFSY Q D L  GK V Y++ +G+Y G N     Y+TK + +
Sbjct: 413 TISMIATQGSCDVPFSYTQRDTLTDGKNVVYNMDDGVYVGVNCFNVEYQTKEEKL 467

[Close]

BLAST of CmoCh08G002030 vs. TrEMBL
Match: A0A0A0K956_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080920 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.6e-20
Identity = 64/150 (42.67%), Postives = 92/150 (61.33%), Query Frame = 1


Query: 121 KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKL-DVKTTIEANIPL 180
           KI++Q V+VLAT    N +  P    +   YT+    TW SS+S KL +VKT I++ +PL
Sbjct: 320 KIYNQSVVVLATKSATNGTGEPTNVRLNIPYTHTTYRTWTSSISKKLVEVKTRIKSGVPL 379

Query: 181 IVDGKMIET--------------SSAKFTQEMVYEVTIPPLSTINVTLCVTKGSCDVPFS 240
           I+DG  I T              S ++ T  + +E+T+P +S+I  TL  TKGSCD+PFS
Sbjct: 380 ILDGNAISTTCKFFGEYKWGETTSKSENTNGITHELTVPAMSSIIGTLYATKGSCDIPFS 439

Query: 241 YQQVDVLRGG--KKVEYSL-NGIYYGTNYY 253
           Y+Q D+L  G   +VE+SL +G+Y+GTNYY
Sbjct: 440 YKQSDILLAGNNNQVEFSLDDGVYHGTNYY 469

[Close]

BLAST of CmoCh08G002030 vs. NCBI nr
Match: gi|659120444|ref|XP_008460197.1| (PREDICTED: uncharacterized protein LOC103499082 [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 3.3e-21
Identity = 66/151 (43.71%), Postives = 89/151 (58.94%), Query Frame = 1


Query: 121 KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTK-LDVKTTIEANIPL 180
           KIH+Q V+ LAT    N +  P    +   YTN    TW S +STK ++VKT I++ +PL
Sbjct: 266 KIHNQSVVALATKSATNGTGKPTNVKLNIPYTNTSYCTWTSIISTKQVEVKTVIKSEVPL 325

Query: 181 IVDGKMIETSSAKF--------------TQEMVYEVTIPPLSTINVTLCVTKGSCDVPFS 240
           IVDGK+  T+S  F              T  + +E T+PP+S I  TL  TKGS D+PFS
Sbjct: 326 IVDGKIFSTASDYFGEYKWGETISESENTNGITHEATVPPMSNIIGTLYATKGSFDIPFS 385

Query: 241 YQQVDVLRGGKK---VEYSL-NGIYYGTNYY 253
           Y+Q D+L  G     VE+SL +G+Y+GTNYY
Sbjct: 386 YKQSDILFAGNNNNPVEFSLDDGVYHGTNYY 416

[Close]

BLAST of CmoCh08G002030 vs. NCBI nr
Match: gi|225465425|ref|XP_002264858.1| (PREDICTED: uncharacterized protein LOC100241465 [Vitis vinifera])

HSP 1 Score: 110.5 bits (275), Expect = 4.3e-21
Identity = 66/165 (40.00%), Postives = 93/165 (56.36%), Query Frame = 1


Query: 104 LLLKMKTFISNDEKICIKIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSV 163
           L+L    +  N   +  +I+DQ VIV+ T E  N ++ P+T+ V  SYT   SSTW  SV
Sbjct: 293 LVLSRNIYNVNFRLMDARIYDQSVIVMTTAEAINRTHEPHTQQVKLSYTETKSSTWKGSV 352

Query: 164 STKLDVKTTIEANIPLIVDGKMI------------ETSSAKFTQEMVYEVTIPPLSTINV 223
           S KL VK T+E+ +P I +GK+             ET S     E +Y VT+P ++ + V
Sbjct: 353 SLKLGVKITMESGVPFIANGKLEISSEFSGAYEWGETESVTTAMETMYNVTVPAMTRVTV 412

Query: 224 TLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTNYYKTK 256
           ++  TKGSCDVPFSY Q D L  GK V  ++ +G+Y G N +  K
Sbjct: 413 SMIGTKGSCDVPFSYTQRDTLTDGKIVVDNMDDGVYVGVNCFNVK 457

[Close]

BLAST of CmoCh08G002030 vs. NCBI nr
Match: gi|297744329|emb|CBI37299.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 110.5 bits (275), Expect = 4.3e-21
Identity = 66/165 (40.00%), Postives = 93/165 (56.36%), Query Frame = 1


Query: 104 LLLKMKTFISNDEKICIKIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSV 163
           L+L    +  N   +  +I+DQ VIV+ T E  N ++ P+T+ V  SYT   SSTW  SV
Sbjct: 422 LVLSRNIYNVNFRLMDARIYDQSVIVMTTAEAINRTHEPHTQQVKLSYTETKSSTWKGSV 481

Query: 164 STKLDVKTTIEANIPLIVDGKMI------------ETSSAKFTQEMVYEVTIPPLSTINV 223
           S KL VK T+E+ +P I +GK+             ET S     E +Y VT+P ++ + V
Sbjct: 482 SLKLGVKITMESGVPFIANGKLEISSEFSGAYEWGETESVTTAMETMYNVTVPAMTRVTV 541

Query: 224 TLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTNYYKTK 256
           ++  TKGSCDVPFSY Q D L  GK V  ++ +G+Y G N +  K
Sbjct: 542 SMIGTKGSCDVPFSYTQRDTLTDGKIVVDNMDDGVYVGVNCFNVK 586

[Close]

BLAST of CmoCh08G002030 vs. NCBI nr
Match: gi|225465417|ref|XP_002264098.1| (PREDICTED: uncharacterized protein LOC100256767 [Vitis vinifera])

HSP 1 Score: 109.8 bits (273), Expect = 7.4e-21
Identity = 64/165 (38.79%), Postives = 92/165 (55.76%), Query Frame = 1


Query: 104 LLLKMKTFISNDEKICIKIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSV 163
           L+L    +  N   +  +I+DQ VI++ T E  N ++ P+T+ V  SYT   S TW  SV
Sbjct: 293 LVLSRNIYNVNFRLMDARIYDQRVIIMTTGEAINMTHEPHTQQVKLSYTETKSRTWKGSV 352

Query: 164 STKLDVKTTIEANIPLIVDGKMI------------ETSSAKFTQEMVYEVTIPPLSTINV 223
           S KL VK T+E+ +P I DGK+              T S     E +Y VT+P ++ + V
Sbjct: 353 SLKLGVKITMESGVPFIADGKLEISSEFSGTYEWGGTESVTTAMETLYNVTVPAMTRVTV 412

Query: 224 TLCVTKGSCDVPFSYQQVDVLRGGKKVEYSL-NGIYYGTNYYKTK 256
           ++  T+GSCDVPFSY Q D L  GK V Y++ +G+Y G N +  K
Sbjct: 413 SMIATQGSCDVPFSYSQRDTLTDGKNVIYNMDDGVYNGVNCFNVK 457

[Close]

BLAST of CmoCh08G002030 vs. NCBI nr
Match: gi|694401999|ref|XP_009376017.1| (PREDICTED: uncharacterized protein LOC103964769 [Pyrus x bretschneideri])

HSP 1 Score: 108.2 bits (269), Expect = 2.2e-20
Identity = 59/145 (40.69%), Postives = 90/145 (62.07%), Query Frame = 1


Query: 121 KIHDQVVIVLATTEVANNSNVPNTECVTFSYTNNGSSTWASSVSTKLDVKTTIEANIPLI 180
           ++++Q V+ +AT E  N +   NT  +  SY N  SS W +SVS KL +KTT+EA +PLI
Sbjct: 318 RVYNQTVVTMATGEALNRTKEQNTIEMKLSYKNTRSSVWNTSVSLKLGIKTTLEAGVPLI 377

Query: 181 VDGKMI------------ETSSAKFTQEMVYEVTIPPLSTINVTLCVTKGSCDVPFSYQQ 240
            +GK+             ET +++   E VY+VT+PP++ +  ++  T+G+CDVPFSY Q
Sbjct: 378 ENGKIEVSAEVGAGFQWGETETSESVVETVYKVTVPPMTRVKESMLATRGACDVPFSYTQ 437

Query: 241 VDVLRGGKKVEYSL-NGIYYGTNYY 253
            DVL  GK+  Y++ +G+Y G N Y
Sbjct: 438 RDVLTNGKQNIYNMDDGVYTGVNNY 462

The following BLAST results are available for this feature:

BLAST of CmoCh08G002030 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh08G002030 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HZZ6_VITVI	3.0e-21	40.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06090 PE=4 SV=...	[more]
D7U3H5_VITVI	5.2e-21	38.79	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06000 PE=4 SV=...	[more]
F6HZZ7_VITVI	1.5e-20	39.39	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06110 PE=4 SV=...	[more]
D7U3H9_VITVI	2.6e-20	38.29	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06060 PE=4 SV=...	[more]
A0A0A0K956_CUCSA	2.6e-20	42.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080920 PE=4 SV=1	[more]

BLAST of CmoCh08G002030 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmoCh08G002030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120444\|ref\|XP_008460197.1\|	3.3e-21	43.71	PREDICTED: uncharacterized protein LOC103499082 [Cucumis melo]	[more]
gi\|225465425\|ref\|XP_002264858.1\|	4.3e-21	40.00	PREDICTED: uncharacterized protein LOC100241465 [Vitis vinifera]	[more]
gi\|297744329\|emb\|CBI37299.3\|	4.3e-21	40.00	unnamed protein product [Vitis vinifera]	[more]
gi\|225465417\|ref\|XP_002264098.1\|	7.4e-21	38.79	PREDICTED: uncharacterized protein LOC100256767 [Vitis vinifera]	[more]
gi\|694401999\|ref\|XP_009376017.1\|	2.2e-20	40.69	PREDICTED: uncharacterized protein LOC103964769 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023307	Aerolysin-like toxin, beta complex domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G002030.1	CmoCh08G002030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023307	Aerolysin-like toxin, beta complex domain	GENE3D	G3DSA:2.170.15.10		coord: 120..257 score: 1.3
None	No IPR available	PANTHER	PTHR39244	FAMILY NOT NAMED	coord: 121..260 score: 3.9
None	No IPR available	PANTHER	PTHR39244:SF1	SUBFAMILY NOT NAMED	coord: 121..260 score: 3.9
None	No IPR available	unknown	SSF56973	Aerolisin/ETX pore-forming domain	coord: 134..256 score: 3.01

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G002030	Cucurbita moschata (Rifu)	cmocmoB327
CmoCh08G002030	Cucumber (Gy14) v1	cgycmoB1012
CmoCh08G002030	Cucurbita maxima (Rimu)	cmacmoB380
CmoCh08G002030	Cucurbita maxima (Rimu)	cmacmoB913
CmoCh08G002030	Wild cucumber (PI 183967)	cmocpiB907
CmoCh08G002030	Cucumber (Chinese Long) v2	cmocuB894
CmoCh08G002030	Melon (DHL92) v3.5.1	cmomeB804
CmoCh08G002030	Watermelon (Charleston Gray)	cmowcgB803
CmoCh08G002030	Watermelon (97103) v1	cmowmB872
CmoCh08G002030	Cucurbita pepo (Zucchini)	cmocpeB846
CmoCh08G002030	Cucurbita pepo (Zucchini)	cmocpeB851
CmoCh08G002030	Bottle gourd (USVL1VR-Ls)	cmolsiB801
CmoCh08G002030	Cucumber (Gy14) v2	cgybcmoB858
CmoCh08G002030	Melon (DHL92) v3.6.1	cmomedB907
CmoCh08G002030	Silver-seed gourd	carcmoB0119
CmoCh08G002030	Cucumber (Chinese Long) v3	cmocucB1060
CmoCh08G002030	Watermelon (97103) v2	cmowmbB900
CmoCh08G002030	Wax gourd	cmowgoB1086