CmoCh07G014100 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G014100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cleft lip and palate transmembrane protein 1
Location	Cmo_Chr07 : 8088399 .. 8092211 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGGAGGAATCGATAAGGTTGGTGATTGTGTGTATTACTTGGGCTCTTTGGCTGTTAAAATCAAAGAGTTTCTTCATTTATCTCATTCTTGGTTTTCTGGATTCCCGTAAGTATTTTATTTATCTCTTAGCTTCTGGTTGAGTTAGACTCCTAGTTATCCATTGCTTCCATAATGTTGCCGATATTCTAATTTTTCTTGAGAAATACATTTTGTTCTTATTAGTATGAATGATAGCATCTGTCTTTTCTATTTCAAAAACTTGAAAAAGAAGTGTGTTGCTTAAACGTCAATGTTTAGATAATTAATGCAATGAAATACTATTTTTCTCCGCCCAATTTTTATCCAAATGGTGTTTTGTGAATTATGTTTCAGAGGGTGTTCTTGGAAGGAAATCTCTATCTCCTGGCAGTTACTATGGTTGTCTCATTACTTCATTCGGTTTTTGATATGCTCGCCTTCAAGAATGGTAAATAAATGTTTGGTCGCTATTTTTTTAACGAGTTAGTGGTTTATAATCTTGAGAAACAACATATGGGCTTTGCTAACTTATGTTATTGGTTTGTACTTAAGATATACAATTTTGGAACAAAAATAAGTCTATGGAAGGACTCTCTGCAAAGTCTGTCATTGTCAGCTTTATATCTCAACTGATTATCTTCTTGTATCTACTTGATAATGATACTTCTTGGATGATACTTGCAAGTTCTGGCATTGGTTGCTGTATTGAGTTTTGGAAAATAGGAAAAGCTATGCATATTGAGGTAGCTATTCTGTTTAATTTCTTCATTGCTCACAGATTTTTTTTTTCTGGTTTTTTTTTTTTTAATAATATACATCCATATGTTAGTATATATTAGCATAGCATCTTAATAAACAGCATGCTTTCATGTTTGCGAATTTCTCTTTTCATGCACTCCTTATTGCAGACTTTATGTGGTGCAAATCCTTAGGCTTCCTTTTATGGTTGCTTAGTTCTTTTGTTCGACTCTGTTTATTAGTTTAGTTAGTTGTACCTGCCATTTTCTTTTGATGGGAAATGAACTGATGGGAATCAGAATTTAAAATGGAAATAAGGCAACTTGCCTTTACATCAGGTGAACACTAAAGATCGGGAGAATCAGAATATGTAGCAAATCAAGTTGTAAAGTATAATATTTTCTTGTTTATTTACAGCTGCAATTCCTTCCTACGATTAGGCTAATTGCTGATTTTTTGGATCTAAGATTGGAATCCCTTTTGTATAAATATTTATATTCTCCACTCAATAGTATATCAGAAAGTTACTTTTTCTCTCATACCTAGTTACATGGTATCAGAGCTAGGCTGTTAGAAACATTGATTGTTAGGTTTAATGCTTCTTAAAGTGGAAATAGTATTTCTTAGAGGAAATCCGAAGGACATTCCATAAAGAAGTTGTCCCCCTTTCCTACCTTTGGAAAAAAAACGTAGATGAGTTGCTTCACGTTATTAATGCATCTCCAAGGACCTTTAGATGAATTTAAAGACTTTGTATCTTGCTTCAAATCGAAGTGATATGGTCCTTACTTTGTAGCAATTACCTTCCTCCTGAACGAATTCTTTTCATGGTGGAAGTGCCAAATCCACTCAGACAGTAAGCTATTATTCTTTTATTTGATACCATAGATTCCCAAAGCACCTTCCTCCAAAGGTTGTTTAACTGTAGCCCATTTGACAAGATGATATTGATTGTTGAGATAAACCTCATTTTAGAAGTAACTAAATCTTCTTATCATAGCGGTGCAACTATGTATCTCCTCTCATTATCATTTTCCTTTCATTCCAGATTGATGGGAGTGGAAGGATATCGATGTTGAGATTTGATCCCAAGTCATATGCAGGAAATAAGATATATTTTCCTTCATTTGAGTTTGAAGTTATGCTTCGAATCAAGAAGCCTATATTCCGTTCCCACAGAAATGATACCATGTATCATGGGTTTTTATCAACCTTGGTAAAAGGTATGCCATGGCATAGTAGTAGGGTAGTAGAGTTGAGTGGTTGTGCTCTGTATTTGCAAATGGGCCCACACACACTCAGACCAAAAGAAAAAAAAAGTTTATTTTAGTAGCTTTCTTTTGCTGATGATTTCATTCGTCTATTATTCATTCTCTTATTTCTGTAAATGAGTCCCTTTTCTATCCATAATAGTATAAATGTTGTGCATGCCTTTTTCATAACATAGTGCAAGTACTTATCTTCTCTCATTATCATTTTTTCTTTCTTTTCAGATTGATAGGAGTGGAAGGATACCTATGTTGAGATTCCGTGATCGTGAGTCATATTCAGGAAATAAGACCAAGGAGTACGATGATCTTGCAATGAAGTATTTGTCCTATGTGCTTTTCTTTCTTGCTGCTTGCTCATCTGTTTATTCACTCATGTATGAACAACACAAGAGCTGGTATTCTTGGATTCTCTCTTCACTTACAAGCTGTGTATACATGTTCGATAAGTCACTTTAAGTGCTTTTATGCATGCTTTTTCACTTACTATGCTCCTAATCTTATATGACGTGTGATTTTACTCAAAAACCTGATTCCTTTATTTAAAAACGCATTATGTATATTTTTTCTTATTGCTAGAGGTTACTTGTCCTGGTGTAACTGTGGTATTTTGGTTTGTGCGAAGAGAATGCATCATGTATTTATGCAGAAAATATTATGTTTTGGTGAAAACAAACAAATTGTTTGTAAGATGTTTCATCCTCGAGCATTTAGGTGCATATTAGTGGATCTGCCATAGATTTCTACTGAGATTGTACGTTTTGGTTTTCTCACATATGTGTTTATTAATTATACTGTCATACACTGAACTTTTTGACCTTTTTTTTTTTTTTGTTGCCAACTTTGCACATAAATTATTCCATTTGGAAATATGGAAGTTGTTGGTTTTCATGATGGTGAGATGCAACTTTTTTCTCTAAACAGGATATAACTTTTTTAAAGTTGAAATCTGTGTGCGGATATGTATGGTTAGTTTCAGTAATCAATATTGGAAGAACTGTGTTGAAAACCACTGAATAGTTTTGATTATTGAGTAATCTGTTACTTCTGAATTTGGATTCTTTGCAGGCTTCATTATGATGTGCCCTCAGTTGTTCATAAACTACAAGCTCAAGTCTGTGGCCCATCTCCCCTGGAGACAGATGACATACAAGTTCCTTAATACCATCATTAACGATCTATTTGCTTTTGTCATAAAAATGCCAACCCTACACAGGCTTTCGGTGTTCCGAGACGGTGAGAAGTTTCTCAATCGAAGTCCTTTTTTGTTGTTGTCGTCCTCGTCATCATGAAATAGTATATATGGAAGAGATATCTGATGCCTGTAAATTGGTTGCACTGCAGATATCATATTTCTTATCTATCTGTATCAGAGATGGAAATACCCAGTCGACAAGAAACGTATAAATGAATTCGGTTTTGGCGGTGAAGAAAATGGAGGAGACGAAGCAACAAATGTGAATGCCATTAAAGACGACGACAAGAAAACTAATTAACTGTGAATGCTTACATGTAACATTACATTTTTTAGAATGTAGAATCCAGTGAGGCAAGTGAAGAGGCATTTTAGTAAGTATTTTTCAAGGTTTTGTTTCTGATTGCCCAGTTCTTATAAAGGATTCATGTTTTAAGCCCTCCTGCATTCGTTAGTGATATCTTCTGTCTTCGAAATAAAATTATGAAATCTGCCTCTGATATTCACTTATGGCCCTGTTTTGGAGTGTATGGGTATTAAGTGTAGATATCAATTTAGGTGAGCTATTACGGTTGAATATGGAGAGGGG

mRNA sequence

ATGTGGGGAGGAATCGATAAGAGGGTGTTCTTGGAAGGAAATCTCTATCTCCTGGCAGTTACTATGGTTGTCTCATTACTTCATTCGGTTTTTGATATGCTCGCCTTCAAGAATGATATACAATTTTGGAACAAAAATAAGTCTATGGAAGGACTCTCTGCAAAGTCTGTCATTGTCAGCTTTATATCTCAACTGATTATCTTCTTGTATCTACTTGATAATGATACTTCTTGGATGATACTTGCAAGTTCTGGCATTGGTTGCTGTATTGAGTTTTGGAAAATAGGAAAAGCTATGCATATTGAGATTGATGGGAGTGGAAGGATATCGATGTTGAGATTTGATCCCAAGTCATATGCAGGAAATAAGATATATTTTCCTTCATTTGAGTTTGAAGTTATGCTTCGAATCAAGAAGCCTATATTCCGTTCCCACAGAAATGATACCATGTATCATGGGTTTTTATCAACCTTGATTGATAGGAGTGGAAGGATACCTATGTTGAGATTCCGTGATCGTGAGTCATATTCAGGAAATAAGACCAAGGAGTACGATGATCTTGCAATGAAGTATTTGTCCTATGTGCTTTTCTTTCTTGCTGCTTGCTCATCTGTTTATTCACTCATGTATGAACAACACAAGAGCTGGCTTCATTATGATGTGCCCTCAGTTGTTCATAAACTACAAGCTCAAGTCTGTGGCCCATCTCCCCTGGAGACAGATGACATACAAGTTCCTTAATACCATCATTAACGATCTATTTGCTTTTGTCATAAAAATGCCAACCCTACACAGGCTTTCGGTGTTCCGAGACGATATCATATTTCTTATCTATCTGTATCAGAGATGGAAATACCCAGTCGACAAGAAACGTATAAATGAATTCGGTTTTGGCGGTGAAGAAAATGGAGGAGACGAAGCAACAAATGTGAATGCCATTAAAGACGACGACAAGAAAACTAATTAACTGTGAATGCTTACATGTAACATTACATTTTTTAGAATGTAGAATCCAGTGAGGCAAGTGAAGAGGCATTTTAGTAAGTATTTTTCAAGGTTTTGTTTCTGATTGCCCAGTTCTTATAAAGGATTCATGTTTTAAGCCCTCCTGCATTCGTTAGTGATATCTTCTGTCTTCGAAATAAAATTATGAAATCTGCCTCTGATATTCACTTATGGCCCTGTTTTGGAGTGTATGGGTATTAAGTGTAGATATCAATTTAGGTGAGCTATTACGGTTGAATATGGAGAGGGG

Coding sequence (CDS)

ATGTGGGGAGGAATCGATAAGAGGGTGTTCTTGGAAGGAAATCTCTATCTCCTGGCAGTTACTATGGTTGTCTCATTACTTCATTCGGTTTTTGATATGCTCGCCTTCAAGAATGATATACAATTTTGGAACAAAAATAAGTCTATGGAAGGACTCTCTGCAAAGTCTGTCATTGTCAGCTTTATATCTCAACTGATTATCTTCTTGTATCTACTTGATAATGATACTTCTTGGATGATACTTGCAAGTTCTGGCATTGGTTGCTGTATTGAGTTTTGGAAAATAGGAAAAGCTATGCATATTGAGATTGATGGGAGTGGAAGGATATCGATGTTGAGATTTGATCCCAAGTCATATGCAGGAAATAAGATATATTTTCCTTCATTTGAGTTTGAAGTTATGCTTCGAATCAAGAAGCCTATATTCCGTTCCCACAGAAATGATACCATGTATCATGGGTTTTTATCAACCTTGATTGATAGGAGTGGAAGGATACCTATGTTGAGATTCCGTGATCGTGAGTCATATTCAGGAAATAAGACCAAGGAGTACGATGATCTTGCAATGAAGTATTTGTCCTATGTGCTTTTCTTTCTTGCTGCTTGCTCATCTGTTTATTCACTCATGTATGAACAACACAAGAGCTGGCTTCATTATGATGTGCCCTCAGTTGTTCATAAACTACAAGCTCAAGTCTGTGGCCCATCTCCCCTGGAGACAGATGACATACAAGTTCCTTAA

Homology

[Close]

BLAST of CmoCh07G014100 vs. Swiss-Prot
Match: CNRB_DICDI (CLPTM1-like membrane protein cnrB OS=Dictyostelium discoideum GN=cnrB PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 57/97 (58.76%), Postives = 79/97 (81.44%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           KR+  + + ++L +T++VS+LH++F+ LAFKNDIQFW  NKSMEGLS K++ ++ +   I
Sbjct: 315 KRMLTDNDPWILGLTLIVSVLHTIFEFLAFKNDIQFWKNNKSMEGLSVKTITLNCVCMGI 374

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEI 104
           IFLYLLDN+TS+MILASSG G  +EFWK+GKAM I+I
Sbjct: 375 IFLYLLDNETSYMILASSGFGFLVEFWKLGKAMTIKI 411

[Close]

BLAST of CmoCh07G014100 vs. Swiss-Prot
Match: CLPT1_DANRE (Cleft lip and palate transmembrane protein 1 homolog OS=Danio rerio GN=clptm1 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.1e-25
Identity = 62/143 (43.36%), Postives = 89/143 (62.24%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           K   LE N YLL +T+VVS++HS+F+ LAFKNDIQFWN  +S+EGLS +S+I      L+
Sbjct: 344 KVALLETNPYLLGLTIVVSIVHSIFEFLAFKNDIQFWNSRQSLEGLSVRSIIFGVFQSLV 403

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRIS----MLRFDPKS---Y 126
           + LY+LDN+T++++  S  IG  I+FWKI K M + +D   RI+     L F  KS    
Sbjct: 404 VLLYILDNETNFVVQVSVFIGLLIDFWKITKVMDVRLDRENRIAGIVPRLVFKDKSTYVE 463

Query: 127 AGNKIYFPSFEFEVMLRIKKPIF 143
           +  KIY     F+ +  +  P+F
Sbjct: 464 SSTKIY-DDMAFKYLSWLLYPLF 485

[Close]

BLAST of CmoCh07G014100 vs. Swiss-Prot
Match: CLPT1_HUMAN (Cleft lip and palate transmembrane protein 1 OS=Homo sapiens GN=CLPTM1 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.5e-23
Identity = 54/122 (44.26%), Postives = 78/122 (63.93%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           K   LE N YLLA+T++VS++HSVF+ LAFKNDIQFWN  +S+EGLS +SV        +
Sbjct: 346 KVALLETNPYLLALTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEGLSVRSVFFGVFQSFV 405

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRISMLRFDPKSYAGNKIYF 126
           + LY+LDN+T++++  S  IG  I+ WKI K M + +D   R++ + F   S+     Y 
Sbjct: 406 VLLYILDNETNFVVQVSVFIGVLIDLWKITKVMDVRLDREHRVAGI-FPRLSFKDKSTYI 465

Query: 127 PS 129
            S
Sbjct: 466 ES 466

[Close]

BLAST of CmoCh07G014100 vs. Swiss-Prot
Match: CLPT1_BOVIN (Cleft lip and palate transmembrane protein 1 homolog OS=Bos taurus GN=CLPTM1 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.7e-23
Identity = 50/106 (47.17%), Postives = 73/106 (68.87%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           K   LE N YLLA+T++VS++HSVF+ LAFKNDIQFWN  +S+EGLS +SV        +
Sbjct: 346 KVALLETNPYLLALTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEGLSVRSVFFGVFQSFV 405

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRISML 113
           + LY+LDN+T++++  S  IG  I+ WKI K M + +D   +++ L
Sbjct: 406 VLLYILDNETNFVVQVSVFIGVLIDLWKITKVMDVRLDREHKVAGL 451

[Close]

BLAST of CmoCh07G014100 vs. Swiss-Prot
Match: CLPT1_MOUSE (Cleft lip and palate transmembrane protein 1 homolog OS=Mus musculus GN=Clptm1 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.7e-22
Identity = 49/104 (47.12%), Postives = 72/104 (69.23%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           K   LE + YLLA+T++VS++HSVF+ LAFKNDIQFWN  +S+EGLS +SV        +
Sbjct: 346 KVALLETSPYLLALTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEGLSVRSVFFGVFQSFV 405

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRIS 111
           + LY+LDN+T++++  S  IG  I+ WKI K M + +D   R++
Sbjct: 406 VLLYILDNETNFVVQVSVFIGVLIDLWKITKVMDVRLDREHRVA 449

[Close]

BLAST of CmoCh07G014100 vs. TrEMBL
Match: A0A0A0L3N6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G443640 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 4.8e-53
Identity = 110/118 (93.22%), Postives = 112/118 (94.92%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           KRVFLEGN YLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI
Sbjct: 322 KRVFLEGNPYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 381

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRISMLRF-DPKSYAGNK 124
           +FLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEID SGRI  LRF D +SYAGNK
Sbjct: 382 VFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDRSGRIPRLRFRDRESYAGNK 439

[Close]

BLAST of CmoCh07G014100 vs. TrEMBL
Match: W9R9X1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013085 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           KRVFLEGN YLLA+TMVVSLLHSVFD LAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI
Sbjct: 319 KRVFLEGNPYLLAITMVVSLLHSVFDFLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 378

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRISMLRF-DPKSYAGNK 124
           +FLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEID SG+I MLRF D +SYAGNK
Sbjct: 379 VFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDRSGKIPMLRFRDRESYAGNK 436

[Close]

BLAST of CmoCh07G014100 vs. TrEMBL
Match: B9H425_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s14210g PE=4 SV=2)

HSP 1 Score: 213.0 bits (541), Expect = 4.1e-52
Identity = 105/118 (88.98%), Postives = 111/118 (94.07%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           KRVFLEGN YLL +TMVVS+LHSVFD LAFKNDIQFWNKNKSMEGLSAKSV+VSFISQLI
Sbjct: 320 KRVFLEGNPYLLVITMVVSMLHSVFDFLAFKNDIQFWNKNKSMEGLSAKSVVVSFISQLI 379

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRISMLRF-DPKSYAGNK 124
           +FLYLLDNDTSWMILASSG+GCCIEFWKIGKAMHIEID SGRI MLRF D +SYAGNK
Sbjct: 380 VFLYLLDNDTSWMILASSGVGCCIEFWKIGKAMHIEIDRSGRIPMLRFRDRESYAGNK 437

[Close]

BLAST of CmoCh07G014100 vs. TrEMBL
Match: B9RW92_RICCO (Cleft lip and palate transmembrane protein, putative OS=Ricinus communis GN=RCOM_1176790 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.4e-52
Identity = 106/118 (89.83%), Postives = 111/118 (94.07%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           KRVFLEGN YLL +TMVVSLLHSVFD LAFKNDIQFWNKNKSMEGLSAKSV+VSFISQLI
Sbjct: 308 KRVFLEGNPYLLLITMVVSLLHSVFDFLAFKNDIQFWNKNKSMEGLSAKSVVVSFISQLI 367

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRISMLRF-DPKSYAGNK 124
           +FLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEID SG+I MLRF D +SYAGNK
Sbjct: 368 VFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDRSGKIPMLRFRDRESYAGNK 425

[Close]

BLAST of CmoCh07G014100 vs. TrEMBL
Match: A0A067JXI2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25871 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-51
Identity = 105/118 (88.98%), Postives = 110/118 (93.22%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           KRVFLEGN YLL +TMVVSLLHSVFD LAFKNDIQFWNKNKSMEGLSAKSV+VSFI QLI
Sbjct: 316 KRVFLEGNPYLLGITMVVSLLHSVFDFLAFKNDIQFWNKNKSMEGLSAKSVVVSFICQLI 375

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRISMLRF-DPKSYAGNK 124
           +FLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEID SG+I MLRF D +SYAGNK
Sbjct: 376 VFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDRSGKIPMLRFRDRESYAGNK 433

[Close]

BLAST of CmoCh07G014100 vs. TAIR10
Match: AT5G08500.1 (AT5G08500.1 Transmembrane CLPTM1 family protein)

HSP 1 Score: 191.8 bits (486), Expect = 4.9e-49
Identity = 96/118 (81.36%), Postives = 103/118 (87.29%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           KRVFLEGN YLL VTM VS+LHSVFD LAFKNDIQFWNKNKSMEGLSAKSV+++FI Q I
Sbjct: 318 KRVFLEGNPYLLGVTMFVSMLHSVFDFLAFKNDIQFWNKNKSMEGLSAKSVVLNFICQFI 377

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRISMLRF-DPKSYAGNK 124
           IFLYLLDNDTSWMILASSG+G CIEFWKIGKAM IE+D SG I  LRF D +SYA NK
Sbjct: 378 IFLYLLDNDTSWMILASSGVGVCIEFWKIGKAMRIEVDRSGMIPRLRFHDRESYASNK 435

[Close]

BLAST of CmoCh07G014100 vs. TAIR10
Match: AT5G23575.1 (AT5G23575.1 Transmembrane CLPTM1 family protein)

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-48
Identity = 93/118 (78.81%), Postives = 103/118 (87.29%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           K+VFLEGN YLL +TM VS+LHSVFD LAFKNDIQFWNKNKSMEGLSAKSV+++FI Q +
Sbjct: 320 KKVFLEGNPYLLGITMFVSMLHSVFDFLAFKNDIQFWNKNKSMEGLSAKSVVLNFICQFV 379

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRISMLRF-DPKSYAGNK 124
           IFLYLLDNDTSWMILASSG+G CIEFWKIGKAM IE+D SG I  LRF D +SYA NK
Sbjct: 380 IFLYLLDNDTSWMILASSGVGVCIEFWKIGKAMRIEVDRSGMIPRLRFHDRESYASNK 437

[Close]

BLAST of CmoCh07G014100 vs. NCBI nr
Match: gi|778694810|ref|XP_011653868.1| (PREDICTED: cleft lip and palate transmembrane protein 1 homolog [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 6.9e-53
Identity = 110/118 (93.22%), Postives = 112/118 (94.92%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           KRVFLEGN YLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI
Sbjct: 322 KRVFLEGNPYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 381

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRISMLRF-DPKSYAGNK 124
           +FLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEID SGRI  LRF D +SYAGNK
Sbjct: 382 VFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDRSGRIPRLRFRDRESYAGNK 439

[Close]

BLAST of CmoCh07G014100 vs. NCBI nr
Match: gi|659069426|ref|XP_008449777.1| (PREDICTED: cleft lip and palate transmembrane protein 1 homolog [Cucumis melo])

HSP 1 Score: 215.7 bits (548), Expect = 9.1e-53
Identity = 109/118 (92.37%), Postives = 112/118 (94.92%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           KRVFLEGN YLLAVTM+VSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI
Sbjct: 318 KRVFLEGNPYLLAVTMIVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 377

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRISMLRF-DPKSYAGNK 124
           +FLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEID SGRI  LRF D +SYAGNK
Sbjct: 378 VFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDRSGRIPRLRFRDRESYAGNK 435

[Close]

BLAST of CmoCh07G014100 vs. NCBI nr
Match: gi|703098527|ref|XP_010096404.1| (hypothetical protein L484_013085 [Morus notabilis])

HSP 1 Score: 214.9 bits (546), Expect = 1.5e-52
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           KRVFLEGN YLLA+TMVVSLLHSVFD LAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI
Sbjct: 319 KRVFLEGNPYLLAITMVVSLLHSVFDFLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 378

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRISMLRF-DPKSYAGNK 124
           +FLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEID SG+I MLRF D +SYAGNK
Sbjct: 379 VFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDRSGKIPMLRFRDRESYAGNK 436

[Close]

BLAST of CmoCh07G014100 vs. NCBI nr
Match: gi|566166448|ref|XP_002305349.2| (hypothetical protein POPTR_0004s14210g [Populus trichocarpa])

HSP 1 Score: 213.0 bits (541), Expect = 5.9e-52
Identity = 105/118 (88.98%), Postives = 111/118 (94.07%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           KRVFLEGN YLL +TMVVS+LHSVFD LAFKNDIQFWNKNKSMEGLSAKSV+VSFISQLI
Sbjct: 320 KRVFLEGNPYLLVITMVVSMLHSVFDFLAFKNDIQFWNKNKSMEGLSAKSVVVSFISQLI 379

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRISMLRF-DPKSYAGNK 124
           +FLYLLDNDTSWMILASSG+GCCIEFWKIGKAMHIEID SGRI MLRF D +SYAGNK
Sbjct: 380 VFLYLLDNDTSWMILASSGVGCCIEFWKIGKAMHIEIDRSGRIPMLRFRDRESYAGNK 437

[Close]

BLAST of CmoCh07G014100 vs. NCBI nr
Match: gi|255553941|ref|XP_002518011.1| (PREDICTED: cleft lip and palate transmembrane protein 1 homolog [Ricinus communis])

HSP 1 Score: 212.6 bits (540), Expect = 7.7e-52
Identity = 106/118 (89.83%), Postives = 111/118 (94.07%), Query Frame = 1


Query: 7   KRVFLEGNLYLLAVTMVVSLLHSVFDMLAFKNDIQFWNKNKSMEGLSAKSVIVSFISQLI 66
           KRVFLEGN YLL +TMVVSLLHSVFD LAFKNDIQFWNKNKSMEGLSAKSV+VSFISQLI
Sbjct: 308 KRVFLEGNPYLLLITMVVSLLHSVFDFLAFKNDIQFWNKNKSMEGLSAKSVVVSFISQLI 367

Query: 67  IFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDGSGRISMLRF-DPKSYAGNK 124
           +FLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEID SG+I MLRF D +SYAGNK
Sbjct: 368 VFLYLLDNDTSWMILASSGIGCCIEFWKIGKAMHIEIDRSGKIPMLRFRDRESYAGNK 425

The following BLAST results are available for this feature:

BLAST of CmoCh07G014100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CNRB_DICDI	1.3e-27	58.76	CLPTM1-like membrane protein cnrB OS=Dictyostelium discoideum GN=cnrB PE=3 SV=1	[more]
CLPT1_DANRE	6.1e-25	43.36	Cleft lip and palate transmembrane protein 1 homolog OS=Danio rerio GN=clptm1 PE...	[more]
CLPT1_HUMAN	1.5e-23	44.26	Cleft lip and palate transmembrane protein 1 OS=Homo sapiens GN=CLPTM1 PE=1 SV=1	[more]
CLPT1_BOVIN	5.7e-23	47.17	Cleft lip and palate transmembrane protein 1 homolog OS=Bos taurus GN=CLPTM1 PE=...	[more]
CLPT1_MOUSE	1.7e-22	47.12	Cleft lip and palate transmembrane protein 1 homolog OS=Mus musculus GN=Clptm1 P...	[more]

BLAST of CmoCh07G014100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3N6_CUCSA	4.8e-53	93.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G443640 PE=4 SV=1	[more]
W9R9X1_9ROSA	1.1e-52	91.53	Uncharacterized protein OS=Morus notabilis GN=L484_013085 PE=4 SV=1	[more]
B9H425_POPTR	4.1e-52	88.98	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s14210g PE=4 SV=2	[more]
B9RW92_RICCO	5.4e-52	89.83	Cleft lip and palate transmembrane protein, putative OS=Ricinus communis GN=RCOM...	[more]
A0A067JXI2_JATCU	1.6e-51	88.98	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25871 PE=4 SV=1	[more]

BLAST of CmoCh07G014100 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08500.1	4.9e-49	81.36	Transmembrane CLPTM1 family protein	[more]
AT5G23575.1	1.9e-48	78.81	Transmembrane CLPTM1 family protein	[more]

BLAST of CmoCh07G014100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778694810\|ref\|XP_011653868.1\|	6.9e-53	93.22	PREDICTED: cleft lip and palate transmembrane protein 1 homolog [Cucumis sativus...	[more]
gi\|659069426\|ref\|XP_008449777.1\|	9.1e-53	92.37	PREDICTED: cleft lip and palate transmembrane protein 1 homolog [Cucumis melo]	[more]
gi\|703098527\|ref\|XP_010096404.1\|	1.5e-52	91.53	hypothetical protein L484_013085 [Morus notabilis]	[more]
gi\|566166448\|ref\|XP_002305349.2\|	5.9e-52	88.98	hypothetical protein POPTR_0004s14210g [Populus trichocarpa]	[more]
gi\|255553941\|ref\|XP_002518011.1\|	7.7e-52	89.83	PREDICTED: cleft lip and palate transmembrane protein 1 homolog [Ricinus communi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008429	CLPTM1

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G014100.1	CmoCh07G014100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008429	Cleft lip and palate transmembrane 1	PANTHER	PTHR21347	CLEFT LIP AND PALATE ASSOCIATED TRANSMEMBRANE PROTEIN-RELATED	coord: 7..106 score: 2.2E-88coord: 159..216 score: 2.2
IPR008429	Cleft lip and palate transmembrane 1	PFAM	PF05602	CLPTM1	coord: 7..118 score: 1.8E-57coord: 159..210 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G014100	Cucumber (Gy14) v1	cgycmoB0485
CmoCh07G014100	Cucumber (Gy14) v1	cgycmoB0730
CmoCh07G014100	Cucurbita maxima (Rimu)	cmacmoB674
CmoCh07G014100	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G014100	Wild cucumber (PI 183967)	cmocpiB867
CmoCh07G014100	Cucumber (Chinese Long) v2	cmocuB859
CmoCh07G014100	Cucumber (Chinese Long) v2	cmocuB860
CmoCh07G014100	Melon (DHL92) v3.5.1	cmomeB796
CmoCh07G014100	Watermelon (Charleston Gray)	cmowcgB765
CmoCh07G014100	Watermelon (97103) v1	cmowmB824
CmoCh07G014100	Watermelon (97103) v1	cmowmB822
CmoCh07G014100	Watermelon (97103) v1	cmowmB827
CmoCh07G014100	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G014100	Bottle gourd (USVL1VR-Ls)	cmolsiB782
CmoCh07G014100	Cucumber (Gy14) v2	cgybcmoB544
CmoCh07G014100	Cucumber (Gy14) v2	cgybcmoB549
CmoCh07G014100	Melon (DHL92) v3.6.1	cmomedB900
CmoCh07G014100	Silver-seed gourd	carcmoB0646
CmoCh07G014100	Cucumber (Chinese Long) v3	cmocucB1007
CmoCh07G014100	Cucumber (Chinese Long) v3	cmocucB1011
CmoCh07G014100	Watermelon (97103) v2	cmowmbB863
CmoCh07G014100	Wax gourd	cmowgoB1071
CmoCh07G014100	Cucurbita moschata (Rifu)	cmocmoB461