CmoCh07G011950 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G011950
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionATP-dependent DNA helicase Q5
LocationCmo_Chr07 : 6480714 .. 6484792 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAATCATTTCTGTTATCTTTGTGGCGCCCTTGAACGGAAAGAGCAGAAAGCTGCCCACTCGTATTCTTCTAACTCGACCACCGGAAAAGAGAGCAGCAGAGACAAAAAATGGAGGCTATTCTAAAGGTAAAAATGTTTTTTCTTCTTCTTCTTTTGATTCTGGTTATGGGGTTATGCTTGTTTCGATTACCGCGGTTTGTTTTTTTGGACTTGTTCTTCTTTGTTGTTGATTAATAGTGAACAATAAGGACATCATTTGTAAAAGAAATTTGTGGGTATTGCATTTGTTGTGGTTTGATCGCTGTTATCTGTACTGTTGCAGAGTTCATTTGGTTTCTCGGCGTTCAGGCCGTATCAGAAAGAAGTCATTCAGGACATTCTTCAAGGGAAGGATTGCTTGGTGGTCATGGCTACTGGAAGTGGCAAGTCCTTATGGTATCTGTAGTTGTCTCTTCTACCATTTGGGTTTGCTTGTTCTTGTTTATTAGCTATTTATTTATTGTATGTTTACTTGTCAAAGTTATCAGGTACCGCCTTTGGTTGTTGGAAAGACTGGCATAGTTGTTAGCCCTCTTATATCACTAATGCAAGATCAGGTAATTGATTGTTGTCATTATCACTGTTTGGCTTTTCACGAGTGTAACGGCCCAAGCCCCACCGCTAGTAGATATGGTCCTCTTTGAGCTTTTCTTTTCGGGTTTCCCCTCACGGTTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGGGTGCTTTGTTCTCCTCCCCAACCGATGTGGGATCTCACAATTCACCCCCTCCGGGGTCCAGCGTCCTAGCTGGCACTTGTTCCCTACTCCAATCGATGTGGGATCTCACCATGAGAATAGTGAAGTGAAGGTTTACACAAACTGATCTGAACACTCACGGGCGTTAAAAAAACATTTTTCTGTTTCTCTTTTTTGCTATTGGGTTTTGGACCTCATTCTTCTTGCCTAACCCATTTTAGAATATGGATTTTGTAGGTAATGGCTTTAAAACAAAGAGGCATCATGTCTGAGTACCTTGGCAGTACTCAGACTGATTCCACTGTTCAAGCCAAGGCGGAGAATGGTCAATATAATATTTTGTTCATGACACCAGAGAAGGCATGCTCTGTTCCTATCAGGTAAGAATTCCTGGAGCAATTCTAAGTCCAATTCTAGGCATTCCTCTTTCTATCTCTGCCTCTTTCTGAGTTTTCATGGCATTTGTATTGTTGTCATTCAATCCCATGTCTGTTTCATTCTCACTTCTTCTCTCTCTCTGTCTTGCTTGATCATGAGTTTTATTTGTTGTGATTTTCTGTATATAGACAGAAGTAATTCTTAAATTCTAGTGAAAAATCACTGTGGATATTATAGTTGTAGAGTGAAACTATTGTCCTTGAGCATCCTGGGAAGGAAAAACGTTTATACGATTGAATCCTTGAAAGGAGGACTAGGTATTACTAGCTGTACAATATGCGGTAACAGATTTGAGTACTTCTGTCGTATTCAGGAATTGGATGTGAGATCCCACATTAGTTGGGGAGGAGAACGAAACACCCTTTATAAGAGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAAGACAATATTTGCTAGCGATGGACTTGGGTTGTTACAAAGGGTATCAGGGCTAGACACCGAGCGATGTGTCAGTGAGGAGGTGGAGCCCCGAAGGGGGGTGGACACTAGGCGGTGTGCCAACAAAGATGCTGGGCTTCGAGGGGGAGGGGGGGGGGGGGGATTGGGGAATCCCACATTGATTGGAGAAGGGAACAAGTGCCAGTGAGGACGTTGACCCTGAAGAGGGATAGATTGTGAAATCCCACGTCGGTTGGGGAGGAGAACGAAACACCCTTTATAAGAGTGTGGAAACCTCTCCCTAACAGACACGTTTTAAAACCTTGAGGGGAAGCCCGGAAGAGAAAGCCCAAAGAAAACAATATCTACTACCGGTGGACTTGGACTCTTACATACTCTTAGTCTACGAGAAAAGAAAAAAGAACAAAAAAAAAACCGAGTAGACTAATAAATGGTTCCCACCTCTCCCAATGTTTCCCAAAAGACCGTTCAAAGAAAACGAGAGACCTGACCAACAATTTGGTATTTAAACAGATCCAATCCTGCTTTTTTGTTAAACAGTGATTGACTTTTAGCTAATGGACTAAAAATGTTGCCTAAGAATGAGAAGTTTGTCACATGTCTATAGCAGGAAGGAGGAGACATGGACAAAGTATGCTAGGACAAATGACAAAGTATGATAGAATTACCTCTCTGTCTCTTTCTACTAGTTTTTGCCAGCCTTGTTGGATTTTCTGCTTTTCGACCATGGAAGCACAGTGATGGATGGCCTTTATAAGTTTTGTTCTTGTATCGTTTCTATATTGACATTTTCCGTGGGGACCGAGACTTCCCACATGCAACCTGTCGTTGCGAGTCATCCTCCAGTCACTATAGTTGCTAANGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGATTGGGGAGTCCAACATCGATTGGAGAAGGGAACGAGTGCCAGCAAGGACGCTAGGTCCTGAAGGGGGTGGATTGTGAGATCCCACGTCGATTGGGGAGGAGAACGAAACACCTTTTATAAGGGTGTGGAAACCTCTCCCTAACAGACACGTTTTAAAAGCCTTGAGGGTAAGCCCGAAGAGGACAATATCGGCTAGTAGTGAGCTTGGGTTATTACACGATGTGTGGGATGGATATACAATGTTGAATACTTATGATGTAATTCTGATGGAATTACATTTTACTCGGTGGCAAAGATGGTTCAAATGGAGAGTTGTGATTCATGACATTCTACTCTTCTATCGTGATTAACACTCCTACTGATTTACTTTGAACTTCATTTTTACAGCTTTTGGTCAAAATTACAGAAGGCAGGAATTTGTTTGTTTGCCGTTGATGAAGCACACTGCATTTCAGAGTGGGGGCATGATTTCAGGTTCATCTTTGATCTTATCCATTTTCCTCTCATTTCAACTCGACTCCAATGGACCTTATCCTGACATACTTGGCCTATTGATTTAGATGTTTAGTTTTCTAACGTCGAAGGTCTCTAGGAAACGGATTATAGTGCCTTATTTAGCCAAGTTGTTAGCATTGAGATGAAAAAACATATTGTTGTTTAGTGTTTCTTCATGTTGTTCGTGGAGTTTTCCTCTCTCCTTTTTAGTACTTCTCTTAATTGTTCTGTGAATTATCGGGTCGGTACTGGTTCACAGGGTAGAATACAAACGATTGGACAAACTACGAGACGTTCTACCAGGCCTTCCATTTGTTGCCTTGACTGCCACTGCTACTGCAAAGTCGGTAGAACGTGATATCTTGCGTCGTTATTCTTTTTTAACTTTAATGTTTATGCTTTTACCTTAAACTATTTCAATAAGCTTTCTTGGGGAAATTAATTTTTCGGTTTTTATTTCACATACTGTTCCAGGGTTCGGAGTGACATCATTAGTTCTTTGAAGATGAAAGATCCACAAGTTACCATTGGTTCATTTGATCGGACTAACCTTTTTTATGGAGTGAAGTCTTTTAATCGTGGTCCATTATTCTTGAACGAGCTCGTGCTCGATATATCTAAATATCTGGCCTCTGGTGGTTCAACTATCATTTACTGCACGACAATTAAAGATGTTGAGCAGGTATTTTCTTTTGCCTCTTACAAACATGGACAGATAAATCTTTTGCATACTCACCTAGTATTCCAGAGAATCAAGCAATAGGATTGTTTCATTATTGTTAATACTTTGTTAGATTTTTGTTAAAGATGCACGTTCAGGTTTATGTCGTCGAACTTATAGATTAGCTGTTTGTGAACTTCAATCGACATTTTCGTAGATATTCAAGGCACTTGAAGAAGCAGGGATTTGTGCTGGTATCTATCACGGTCAAATGGACAAAAAAGCACGTGCCGAATCCCACAGGTTATACCACTATTTTGAGGCTCTTATGGAGATGTGCCCTCTCTAA

mRNA sequence

AGAATCATTTCTGTTATCTTTGTGGCGCCCTTGAACGGAAAGAGCAGAAAGCTGCCCACTCGTATTCTTCTAACTCGACCACCGGAAAAGAGAGCAGCAGAGACAAAAAATGGAGGCTATTCTAAAGGCCGTATCAGAAAGAAGTCATTCAGGACATTCTTCAAGGGAAGGATTGCTTGGTGGTCATGGCTACTGGAAGTGGCAAGTCCTTATGGTACCGCCTTTGGTTGTTGGAAAGACTGGCATAGTAATGGCTTTAAAACAAAGAGGCATCATGTCTGAGTACCTTGGCAGTACTCAGACTGATTCCACTGTTCAAGCCAAGGCGGAGAATGGTCAATATAATATTTTGTTCATGACACCAGAGAAGGCATGCTCTGTTCCTATCAGCTTTTGGTCAAAATTACAGAAGGCAGGAATTTGTTTGTTTGCCGTTGATGAAGCACACTGCATTTCAGAGTGGGGGCATGATTTCAGGGTAGAATACAAACGATTGGACAAACTACGAGACGTTCTACCAGGCCTTCCATTTGTTGCCTTGACTGCCACTGCTACTGCAAAGGTTCGGAGTGACATCATTAGTTCTTTGAAGATGAAAGATCCACAAGTTACCATTGGTTCATTTGATCGGACTAACCTTTTTTATGGAGTGAAGTCTTTTAATCGTGGTCCATTATTCTTGAACGAGCTCGTGCTCGATATATCTAAATATCTGGCCTCTGGTGGTTCAACTATCATTTACTGCACGACAATTAAAGATGTTGAGCAGATTTTTGTTAAAGATGCACGTTCAGGTTTATGTCGTCGAACTTATAGATTAGCTATATTCAAGGCACTTGAAGAAGCAGGGATTTGTGCTGGTATCTATCACGGTCAAATGGACAAAAAAGCACGTGCCGAATCCCACAGGTTATACCACTATTTTGAGGCTCTTATGGAGATGTGCCCTCTCTAA

Coding sequence (CDS)

ATGGAGGCTATTCTAAAGGCCGTATCAGAAAGAAGTCATTCAGGACATTCTTCAAGGGAAGGATTGCTTGGTGGTCATGGCTACTGGAAGTGGCAAGTCCTTATGGTACCGCCTTTGGTTGTTGGAAAGACTGGCATAGTAATGGCTTTAAAACAAAGAGGCATCATGTCTGAGTACCTTGGCAGTACTCAGACTGATTCCACTGTTCAAGCCAAGGCGGAGAATGGTCAATATAATATTTTGTTCATGACACCAGAGAAGGCATGCTCTGTTCCTATCAGCTTTTGGTCAAAATTACAGAAGGCAGGAATTTGTTTGTTTGCCGTTGATGAAGCACACTGCATTTCAGAGTGGGGGCATGATTTCAGGGTAGAATACAAACGATTGGACAAACTACGAGACGTTCTACCAGGCCTTCCATTTGTTGCCTTGACTGCCACTGCTACTGCAAAGGTTCGGAGTGACATCATTAGTTCTTTGAAGATGAAAGATCCACAAGTTACCATTGGTTCATTTGATCGGACTAACCTTTTTTATGGAGTGAAGTCTTTTAATCGTGGTCCATTATTCTTGAACGAGCTCGTGCTCGATATATCTAAATATCTGGCCTCTGGTGGTTCAACTATCATTTACTGCACGACAATTAAAGATGTTGAGCAGATTTTTGTTAAAGATGCACGTTCAGGTTTATGTCGTCGAACTTATAGATTAGCTATATTCAAGGCACTTGAAGAAGCAGGGATTTGTGCTGGTATCTATCACGGTCAAATGGACAAAAAAGCACGTGCCGAATCCCACAGGTTATACCACTATTTTGAGGCTCTTATGGAGATGTGCCCTCTCTAA
Homology
[Close]
BLAST of CmoCh07G011950 vs. Swiss-Prot
Match: WRN_XENLA (Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis GN=wrn PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.2e-34
Identity = 93/242 (38.43%), Postives = 130/242 (53.72%), Query Frame = 1 

Query: 34  LMVPPLVVGKTGIVMALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVPI 93
           +++ PL+      V+ L+   I S +LGS Q+ + +Q   ++G+  +++MTPE  CS  I
Sbjct: 534 IVICPLISLMEDQVLQLEMSNISSCFLGSAQSKNVLQ-DVKDGKMRVIYMTPE-FCSRGI 593

Query: 94  SFWSKLQ-KAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVALTATATAKV 153
           S    L  + GI L A+DEAHCISEWGHDFR  Y+ L  L+ +LP +P VALTATA+  +
Sbjct: 594 SLLQDLDNRYGITLIAIDEAHCISEWGHDFRSAYRSLGSLKRMLPNVPIVALTATASPSI 653

Query: 154 RSDIISSLKMKDPQVTIGSFDRTNLFYGV-KSFNRGPLFLNELVLDISKYLASG----GS 213
           R DI  SL + +PQVT  SFDR NL+  V +      + L + +  I K   SG    G+
Sbjct: 654 REDITKSLNLHNPQVTCTSFDRPNLYLDVARKTTNISIDLRQFL--IKKQQGSGWEFEGA 713

Query: 214 TIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARAESHR 270
           TI+YC T K  EQ+  +                  L + GI  G YH  M  K R E H 
Sbjct: 714 TIVYCPTRKTSEQVTAE------------------LIKLGIACGTYHAGMGIKQRREVHH 753

[Close]
BLAST of CmoCh07G011950 vs. Swiss-Prot
Match: WRN_HUMAN (Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 4.1e-33
Identity = 89/257 (34.63%), Postives = 132/257 (51.36%), Query Frame = 1 

Query: 27  GYWKWQVLMVPPLVVGKTGIVMA------------LKQRGIMSEYLGSTQTDSTVQAKAE 86
           GY K      PP+ VGK G+V++            LK   I + +LGS Q+++ V    +
Sbjct: 574 GYGKSLCFQYPPVYVGKIGLVISPLISLMEDQVLQLKMSNIPACFLGSAQSEN-VLTDIK 633

Query: 87  NGQYNILFMTPEKACSVPISFWSKLQK-AGICLFAVDEAHCISEWGHDFRVEYKRLDKLR 146
            G+Y I+++TPE  CS  +    +L+   GI L AVDEAHCISEWGHDFR  +++L  L+
Sbjct: 634 LGKYRIVYVTPEY-CSGNMGLLQQLEADIGITLIAVDEAHCISEWGHDFRDSFRKLGSLK 693

Query: 147 DVLPGLPFVALTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPL-FLN 206
             LP +P VALTATA++ +R DI+  L +++PQ+T   FDR NL+  V+      L  L 
Sbjct: 694 TALPMVPIVALTATASSSIREDIVRCLNLRNPQITCTGFDRPNLYLEVRRKTGNILQDLQ 753

Query: 207 ELVLDISKYLASGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGI 266
             ++  S +    G TIIYC + K  +Q+  +                  L +  +  G 
Sbjct: 754 PFLVKTSSHWEFEGPTIIYCPSRKMTQQVTGE------------------LRKLNLSCGT 810

Query: 267 YHGQMDKKARAESHRLY 270
           YH  M    R + H  +
Sbjct: 814 YHAGMSFSTRKDIHHRF 810

[Close]
BLAST of CmoCh07G011950 vs. Swiss-Prot
Match: WRN_MOUSE (Werner syndrome ATP-dependent helicase homolog OS=Mus musculus GN=Wrn PE=1 SV=3)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-32
Identity = 87/224 (38.84%), Postives = 122/224 (54.46%), Query Frame = 1 

Query: 27  GYWKWQVLMVPPLVVGKTGIVMA------------LKQRGIMSEYLGSTQTDSTVQAKAE 86
           GY K      PP+  GK GIV++            L+   + +  LGS Q+ + +    +
Sbjct: 538 GYGKSLCFQYPPVYTGKIGIVISPLISLMEDQVLQLELSNVPACLLGSAQSKN-ILGDVK 597

Query: 87  NGQYNILFMTPEKACSVPISFWSKLQKA-GICLFAVDEAHCISEWGHDFRVEYKRLDKLR 146
            G+Y ++++TPE  CS  +    +L  + GI L AVDEAHCISEWGHDFR  ++ L  L+
Sbjct: 598 LGKYRVIYITPE-FCSGNLDLLQQLDSSIGITLIAVDEAHCISEWGHDFRSSFRMLGSLK 657

Query: 147 DVLPGLPFVALTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLF--YGVKSFNRGPLFL 206
             LP +P +AL+ATA++ +R DIIS L +KDPQ+T   FDR NL+   G K+ N      
Sbjct: 658 TALPLVPVIALSATASSSIREDIISCLNLKDPQITCTGFDRPNLYLEVGRKTGNILQDLK 717

Query: 207 NELVLDISKYLASGGSTIIYCTTIKDVEQIFVKDARSGLCRRTY 236
             LV   S      G TIIYC + K  EQ+  +  +  L  RTY
Sbjct: 718 PFLVRKASSAWEFEGPTIIYCPSRKMTEQVTAELGKLNLACRTY 759

[Close]
BLAST of CmoCh07G011950 vs. Swiss-Prot
Match: RQL3_ARATH (ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana GN=RECQL3 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.5e-30
Identity = 87/242 (35.95%), Postives = 127/242 (52.48%), Query Frame = 1 

Query: 33  VLMVPPLVVGKTGIVMALKQRGIMSEYLGSTQTD---STVQAKAENGQYNI--LFMTPEK 92
           VL+V PL+      VMALK++GI +EYL STQ     + +    ++G+ ++  L++TPE 
Sbjct: 79  VLVVSPLIALMENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPEL 138

Query: 93  ACSVPISFWSKLQKAG----ICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 152
             +    F  KL+K      + L A+DEAHCIS WGHDFR  Y++L  LRD L  +P +A
Sbjct: 139 IATK--GFMLKLRKLHSRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLA 198

Query: 153 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 212
           LTATA  KV+ D+I SL +++P V   SF+R N+FY V+  +     L+    D+   L 
Sbjct: 199 LTATAAPKVQKDVIDSLNLRNPLVLKSSFNRPNIFYEVRYKD----LLDNAYTDLGNLLK 258

Query: 213 SGGS--TIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKA 264
           S G+   IIYC      + + V                   L   GI +  YH  ++ K 
Sbjct: 259 SCGNICAIIYCLERTTCDDLSVH------------------LSSIGISSAAYHAGLNSKM 296

[Close]
BLAST of CmoCh07G011950 vs. Swiss-Prot
Match: MED34_ARATH (Mediator of RNA polymerase II transcription subunit 34 OS=Arabidopsis thaliana GN=MED34 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.1e-29
Identity = 91/243 (37.45%), Postives = 125/243 (51.44%), Query Frame = 1 

Query: 34  LMVPPLVVGKTGIVMALKQRGIMSEYLGST---QTDSTVQAKAENGQ--YNILFMTPEKA 93
           L+V PL+      VM L   GI +  L ST   + +  V    E G+    IL++TPEK 
Sbjct: 133 LVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEKV 192

Query: 94  CSVPISFWSKLQK---AG-ICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVAL 153
            S    F SKL+K   AG + L ++DEAHC S+WGHDFR +YK L  L+   P +P VAL
Sbjct: 193 -SKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPKVPMVAL 252

Query: 154 TATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNR-GPLFLNELVLDISKYLA 213
           TATAT KV++D+I  L +      + S +R NLFY V+  +  G L ++E+   I +  +
Sbjct: 253 TATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIAEFIRESYS 312

Query: 214 SGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 267
           +  S I+YC + K+ EQ                  I   L E GI A  YH  MD   R 
Sbjct: 313 NNESGIVYCFSRKECEQ------------------IAGDLRERGISADYYHADMDANMRE 356

[Close]
BLAST of CmoCh07G011950 vs. TrEMBL
Match: A0A0A0L1A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188732 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.8e-102
Identity = 189/222 (85.14%), Postives = 199/222 (89.64%), Query Frame = 1 

Query: 48  MALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVPISFWSKLQKAGICLF 107
           MALKQRGI SEYLGSTQTDSTVQAKAE+GQYN+LFMTPEKACSVP+SFWSKL+KAGICLF
Sbjct: 1   MALKQRGIKSEYLGSTQTDSTVQAKAESGQYNVLFMTPEKACSVPMSFWSKLKKAGICLF 60

Query: 108 AVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVALTATATAKVRSDIISSLKMKDPQV 167
           AVDEAHCISEWGHDFRVEYK+LDKLRDVLP LPFVALTATAT KVRSDII+SLKMKDPQV
Sbjct: 61  AVDEAHCISEWGHDFRVEYKQLDKLRDVLPDLPFVALTATATEKVRSDIINSLKMKDPQV 120

Query: 168 TIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLASGGSTIIYCTTIKDVEQIFVKDAR 227
           TIGSFDRTNLFYGVKSFNRGPLF+NE VLDISKY+ASGGSTIIYCTTIKDVEQ       
Sbjct: 121 TIGSFDRTNLFYGVKSFNRGPLFMNEFVLDISKYVASGGSTIIYCTTIKDVEQ------- 180

Query: 228 SGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARAESHRLY 270
                      IFKALEEAGI AGIYHGQMDKK+RAESHRL+
Sbjct: 181 -----------IFKALEEAGISAGIYHGQMDKKSRAESHRLF 204

[Close]
BLAST of CmoCh07G011950 vs. TrEMBL
Match: A0A0A0KWB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188670 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 4.2e-101
Identity = 205/292 (70.21%), Postives = 219/292 (75.00%), Query Frame = 1 

Query: 1   MEAILKAVSERSHSGHSSREGLLG-----------GHGYWKWQVLMVPPLVVGKTGIV-- 60
           MEAILK+    S      +E + G           G G  K     +PPLVVGKTGIV  
Sbjct: 1   MEAILKSYFGFSAFRPYQKEVIQGILRGKDCLVVKGTGSGKSLCYQLPPLVVGKTGIVVS 60

Query: 61  ----------MALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVPISFWS 120
                     MALKQRGI SEYLGSTQTD TVQ KAE GQYNILFMTPEKACSV  SFWS
Sbjct: 61  PLISLMQDQVMALKQRGIKSEYLGSTQTDYTVQHKAERGQYNILFMTPEKACSVSTSFWS 120

Query: 121 KLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVALTATATAKVRSDII 180
           KL+ AGICLFAVDEAHCISEWGHDFRVEYK+LDKLRDVLPGLPFVALTATAT KVR+DII
Sbjct: 121 KLKTAGICLFAVDEAHCISEWGHDFRVEYKQLDKLRDVLPGLPFVALTATATEKVRNDII 180

Query: 181 SSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLASGGSTIIYCTTIKD 240
           +SLKMKDPQVTIGSFDRTNLFYGVKSF+RGPLF+N+LVLDISKY+ASGGSTIIYCTTIKD
Sbjct: 181 NSLKMKDPQVTIGSFDRTNLFYGVKSFDRGPLFMNKLVLDISKYVASGGSTIIYCTTIKD 240

Query: 241 VEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARAESHRLY 270
           VEQ                  I KALEEAGI AGIYHG MDK +RAESHRL+
Sbjct: 241 VEQ------------------ISKALEEAGISAGIYHGLMDKTSRAESHRLF 274

[Close]
BLAST of CmoCh07G011950 vs. TrEMBL
Match: M5W6N4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001081mg PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.8e-86
Identity = 168/276 (60.87%), Postives = 203/276 (73.55%), Query Frame = 1 

Query: 6   KAVSERSHSGHSSREGLLGGHGYWKWQVLMVPPLVVGKTGIV------------MALKQR 65
           K V ++   G+ S   +  G G  K     VPPLVVGKTG+V            M+LKQR
Sbjct: 22  KDVIDKIIEGNDSLIVMATGSG--KSLCYQVPPLVVGKTGVVVSPLISLMQDQVMSLKQR 81

Query: 66  GIMSEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVPISFWSKLQKAGICLFAVDEAH 125
           GI +E++GS+QTDSTVQ +AE+GQ++IL+MTPEKAC +P SFWSKL   GICLFAVDEAH
Sbjct: 82  GIRAEFMGSSQTDSTVQNRAESGQFDILYMTPEKACLIPASFWSKLLSVGICLFAVDEAH 141

Query: 126 CISEWGHDFRVEYKRLDKLRDVLPGLPFVALTATATAKVRSDIISSLKMKDPQVTIGSFD 185
           CISEWGHDFRVEYK+LDKLR +L  +PF+ALTATAT KVR+DI++SLKM++P VTIGSFD
Sbjct: 142 CISEWGHDFRVEYKKLDKLRGILVDVPFIALTATATEKVRTDIVNSLKMQNPYVTIGSFD 201

Query: 186 RTNLFYGVKSFNRGPLFLNELVLDISKYLASGGSTIIYCTTIKDVEQIFVKDARSGLCRR 245
           R NLFYGVKSFNRG  F++ELV ++SK++   GSTIIYCTTIKDVEQ             
Sbjct: 202 RPNLFYGVKSFNRGQSFVHELVQEVSKFVRRDGSTIIYCTTIKDVEQ------------- 261

Query: 246 TYRLAIFKALEEAGICAGIYHGQMDKKARAESHRLY 270
                +FK+L+E GI  G YHGQMD KARAESHRL+
Sbjct: 262 -----VFKSLKELGIKVGTYHGQMDSKARAESHRLF 277

[Close]
BLAST of CmoCh07G011950 vs. TrEMBL
Match: A0A0S3S5R8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G163400 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 7.9e-84
Identity = 167/246 (67.89%), Postives = 186/246 (75.61%), Query Frame = 1 

Query: 36  VPPLVVGKTGIV------------MALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 95
           VPPLVV KTGIV            MALKQRGI +EYLGS Q D TV +KAE GQ++ILFM
Sbjct: 50  VPPLVVKKTGIVVSPLISLMQDQVMALKQRGIRAEYLGSAQKDFTVHSKAERGQFDILFM 109

Query: 96  TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 155
           TPEKAC+VP SFW+ L KAGI LFAVDEAHCISEWGHDFRVEYK LDKLR+VL  +PFV 
Sbjct: 110 TPEKACTVPTSFWTNLLKAGISLFAVDEAHCISEWGHDFRVEYKHLDKLREVLLDVPFVG 169

Query: 156 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 215
           LTATAT KVR DIISSLKM +P VTIGSFDRTNLFYGVK  NRG  F++ELV +ISK +A
Sbjct: 170 LTATATEKVRFDIISSLKMDNPYVTIGSFDRTNLFYGVKLLNRGQSFIDELVREISKEVA 229

Query: 216 SGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 270
           +GGSTIIYCTTIKDVEQ                  +FK+  EAGI AG+YHGQM+ KAR 
Sbjct: 230 TGGSTIIYCTTIKDVEQ------------------VFKSFTEAGIEAGMYHGQMNGKARE 277

[Close]
BLAST of CmoCh07G011950 vs. TrEMBL
Match: A0A0L9VCG5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g141500 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 7.9e-84
Identity = 167/246 (67.89%), Postives = 186/246 (75.61%), Query Frame = 1 

Query: 36  VPPLVVGKTGIV------------MALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFM 95
           VPPLVV KTGIV            MALKQRGI +EYLGS Q D TV +KAE GQ++ILFM
Sbjct: 50  VPPLVVKKTGIVVSPLISLMQDQVMALKQRGIRAEYLGSAQKDFTVHSKAERGQFDILFM 109

Query: 96  TPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 155
           TPEKAC+VP SFW+ L KAGI LFAVDEAHCISEWGHDFRVEYK LDKLR+VL  +PFV 
Sbjct: 110 TPEKACTVPTSFWTNLLKAGISLFAVDEAHCISEWGHDFRVEYKHLDKLREVLLDVPFVG 169

Query: 156 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 215
           LTATAT KVR DIISSLKM +P VTIGSFDRTNLFYGVK  NRG  F++ELV +ISK +A
Sbjct: 170 LTATATEKVRFDIISSLKMDNPYVTIGSFDRTNLFYGVKLLNRGQSFIDELVREISKEVA 229

Query: 216 SGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 270
           +GGSTIIYCTTIKDVEQ                  +FK+  EAGI AG+YHGQM+ KAR 
Sbjct: 230 TGGSTIIYCTTIKDVEQ------------------VFKSFTEAGIEAGMYHGQMNGKARE 277

[Close]
BLAST of CmoCh07G011950 vs. TAIR10
Match: AT4G35740.1 (AT4G35740.1 DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-31
Identity = 87/242 (35.95%), Postives = 127/242 (52.48%), Query Frame = 1 

Query: 33  VLMVPPLVVGKTGIVMALKQRGIMSEYLGSTQTD---STVQAKAENGQYNI--LFMTPEK 92
           VL+V PL+      VMALK++GI +EYL STQ     + +    ++G+ ++  L++TPE 
Sbjct: 79  VLVVSPLIALMENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPEL 138

Query: 93  ACSVPISFWSKLQKAG----ICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVA 152
             +    F  KL+K      + L A+DEAHCIS WGHDFR  Y++L  LRD L  +P +A
Sbjct: 139 IATK--GFMLKLRKLHSRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLA 198

Query: 153 LTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLA 212
           LTATA  KV+ D+I SL +++P V   SF+R N+FY V+  +     L+    D+   L 
Sbjct: 199 LTATAAPKVQKDVIDSLNLRNPLVLKSSFNRPNIFYEVRYKD----LLDNAYTDLGNLLK 258

Query: 213 SGGS--TIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKA 264
           S G+   IIYC      + + V                   L   GI +  YH  ++ K 
Sbjct: 259 SCGNICAIIYCLERTTCDDLSVH------------------LSSIGISSAAYHAGLNSKM 296

[Close]
BLAST of CmoCh07G011950 vs. TAIR10
Match: AT1G31360.1 (AT1G31360.1 RECQ helicase L2)

HSP 1 Score: 129.4 bits (324), Expect = 3.4e-30
Identity = 91/243 (37.45%), Postives = 125/243 (51.44%), Query Frame = 1 

Query: 34  LMVPPLVVGKTGIVMALKQRGIMSEYLGST---QTDSTVQAKAENGQ--YNILFMTPEKA 93
           L+V PL+      VM L   GI +  L ST   + +  V    E G+    IL++TPEK 
Sbjct: 133 LVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEKV 192

Query: 94  CSVPISFWSKLQK---AG-ICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVAL 153
            S    F SKL+K   AG + L ++DEAHC S+WGHDFR +YK L  L+   P +P VAL
Sbjct: 193 -SKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPKVPMVAL 252

Query: 154 TATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNR-GPLFLNELVLDISKYLA 213
           TATAT KV++D+I  L +      + S +R NLFY V+  +  G L ++E+   I +  +
Sbjct: 253 TATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIAEFIRESYS 312

Query: 214 SGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARA 267
           +  S I+YC + K+ EQ                  I   L E GI A  YH  MD   R 
Sbjct: 313 NNESGIVYCFSRKECEQ------------------IAGDLRERGISADYYHADMDANMRE 356

[Close]
BLAST of CmoCh07G011950 vs. TAIR10
Match: AT1G10930.1 (AT1G10930.1 DNA helicase (RECQl4A))

HSP 1 Score: 112.1 bits (279), Expect = 5.7e-25
Identity = 75/241 (31.12%), Postives = 117/241 (48.55%), Query Frame = 1 

Query: 34  LMVPPLVVGKTGIVMALKQRGIMSEYLGS-----TQTDSTVQAKAENGQYNILFMTPEKA 93
           L++ PLV      +M L Q  I +  L +      Q     +  +E+ +Y +L++TPEK 
Sbjct: 497 LVISPLVSLIQDQIMNLLQANIPAASLSAGMEWAEQLKIFQELNSEHSKYKLLYVTPEKV 556

Query: 94  CSVP--ISFWSKLQKAGICL-FAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVALT 153
                 +     L   G+   F +DEAHC+S+WGHDFR +Y+ L  L+   P +P +ALT
Sbjct: 557 AKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLALT 616

Query: 154 ATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLASG 213
           ATATA V+ D++ +L + +  V   SF+R NL+Y V    +      + + DI K++   
Sbjct: 617 ATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTK------KCLEDIDKFIKEN 676

Query: 214 ---GSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKAR 264
                 IIYC +  D E+                  + + L+E G  A  YHG M+ + R
Sbjct: 677 HFDECGIIYCLSRMDCEK------------------VSERLQEFGHKAAFYHGSMEPEQR 713

[Close]
BLAST of CmoCh07G011950 vs. TAIR10
Match: AT5G27680.1 (AT5G27680.1 RECQ helicase SIM)

HSP 1 Score: 111.3 bits (277), Expect = 9.7e-25
Identity = 67/184 (36.41%), Postives = 101/184 (54.89%), Query Frame = 1 

Query: 22  LLGGHGYWKWQVLMVPPLVVGKTGIVMA------------LKQRGIMSEYLGSTQTDSTV 81
           +L   G  K     +P L+ GK  +V++            L +  + + +LGS Q D+ +
Sbjct: 188 VLAATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLSRHKVSACFLGSGQLDNCI 247

Query: 82  QAKAENGQYNILFMTPEKACSVPISFWSKLQKA-GICLFAVDEAHCISEWGHDFRVEYKR 141
           + KA  G Y I+++ PE    + I    KL K  GI LFA+DEAHC+S+WGHDFR  Y++
Sbjct: 248 EEKAMQGMYQIIYVCPETVVRL-IKPLQKLAKTHGIALFAIDEAHCVSKWGHDFRPHYRK 307

Query: 142 LDKLRD---------VLPGLPFVALTATATAKVRSDIISSLKM-KDPQVTIGSFDRTNLF 183
           L  LR+         +   +P +ALTATAT  V+ DI+ SL + K+ ++ + SF R NL 
Sbjct: 308 LSVLRENFCASNLEFLEYDVPIMALTATATVNVQEDILESLHLSKETKIVLTSFFRPNLQ 367

[Close]
BLAST of CmoCh07G011950 vs. TAIR10
Match: AT1G60930.1 (AT1G60930.1 RECQ helicase L4B)

HSP 1 Score: 111.3 bits (277), Expect = 9.7e-25
Identity = 76/242 (31.40%), Postives = 116/242 (47.93%), Query Frame = 1 

Query: 34  LMVPPLVVGKTGIVMALKQRGIMSEYLGS-----TQTDSTVQAKAENGQYNILFMTPEKA 93
           L++ PLV      +M L Q  I +  L +      Q +   +  +E  +Y +L++TPEK 
Sbjct: 513 LVISPLVSLIQDQIMNLLQTNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEKV 572

Query: 94  CSVPISFWSKLQ----KAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVAL 153
                S    L+    ++ +  F +DEAHC+S+WGHDFR +Y+ L  L+   P +P +AL
Sbjct: 573 AKSE-SLLRHLEILNSRSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIPMLAL 632

Query: 154 TATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLAS 213
           TATAT  V+ D++ +L + +  V   SF+R NL+Y V          N+ + DI K++  
Sbjct: 633 TATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKT------NKCLEDIDKFIRE 692

Query: 214 G---GSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKA 264
                  IIYC +  D E+                  + +AL   G  A  YHG MD   
Sbjct: 693 NHFDECGIIYCLSRMDCEK------------------VTEALRVFGHKAAFYHGSMDPGK 729

[Close]
BLAST of CmoCh07G011950 vs. NCBI nr
Match: gi|659082754|ref|XP_008442015.1| (PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X1 [Cucumis melo])

HSP 1 Score: 397.1 bits (1019), Expect = 2.5e-107
Identity = 214/292 (73.29%), Postives = 229/292 (78.42%), Query Frame = 1 

Query: 1   MEAILKAV----SERSHSGHSSREGLLG-------GHGYWKWQVLMVPPLVVGKTGIV-- 60
           MEAILK+     + R +     ++ LLG         G  K     VPPLVVGKTGIV  
Sbjct: 1   MEAILKSCFGFSAFRPYQKEIVQDILLGKDCLVVMSTGSGKSLCYQVPPLVVGKTGIVVS 60

Query: 61  ----------MALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVPISFWS 120
                     MALKQ+GI SEYLGSTQTDSTVQAKAE+GQYNILFMTPEKACSVP+SFWS
Sbjct: 61  PLLSLMQDQVMALKQKGIKSEYLGSTQTDSTVQAKAESGQYNILFMTPEKACSVPMSFWS 120

Query: 121 KLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVALTATATAKVRSDII 180
           KL+KAGICLFAVDEAHCISEWGHDFRVEYK+LDKLRDVLPGLPFVALTATAT KVRSDII
Sbjct: 121 KLKKAGICLFAVDEAHCISEWGHDFRVEYKQLDKLRDVLPGLPFVALTATATEKVRSDII 180

Query: 181 SSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLASGGSTIIYCTTIKD 240
           +SLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLF+NELVLDISKY+ASGGSTIIYCTTIKD
Sbjct: 181 NSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFMNELVLDISKYVASGGSTIIYCTTIKD 240

Query: 241 VEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARAESHRLY 270
           VEQ                  IFKALEEAGI  GIYHGQMDKK+RAESHRL+
Sbjct: 241 VEQ------------------IFKALEEAGISVGIYHGQMDKKSRAESHRLF 274

[Close]
BLAST of CmoCh07G011950 vs. NCBI nr
Match: gi|778692430|ref|XP_011653463.1| (PREDICTED: ATP-dependent DNA helicase Q-like SIM [Cucumis sativus])

HSP 1 Score: 396.0 bits (1016), Expect = 5.6e-107
Identity = 214/292 (73.29%), Postives = 228/292 (78.08%), Query Frame = 1 

Query: 1   MEAILKAV----SERSHSGHSSREGLLG-------GHGYWKWQVLMVPPLVVGKTGIV-- 60
           MEAILK+     + R +     R+ LLG         G  K     VPPLVVGKTGIV  
Sbjct: 1   MEAILKSYFGFSAFRLYQKEIIRDILLGKDCLVVMSTGSGKSFCYQVPPLVVGKTGIVVS 60

Query: 61  ----------MALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVPISFWS 120
                     MALKQRGI SEYLGSTQTDSTVQAKAE+GQYN+LFMTPEKACSVP+SFWS
Sbjct: 61  PLISLMQDQVMALKQRGIKSEYLGSTQTDSTVQAKAESGQYNVLFMTPEKACSVPMSFWS 120

Query: 121 KLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVALTATATAKVRSDII 180
           KL+KAGICLFAVDEAHCISEWGHDFRVEYK+LDKLRDVLP LPFVALTATAT KVRSDII
Sbjct: 121 KLKKAGICLFAVDEAHCISEWGHDFRVEYKQLDKLRDVLPDLPFVALTATATEKVRSDII 180

Query: 181 SSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLASGGSTIIYCTTIKD 240
           +SLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLF+NE VLDISKY+ASGGSTIIYCTTIKD
Sbjct: 181 NSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFMNEFVLDISKYVASGGSTIIYCTTIKD 240

Query: 241 VEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARAESHRLY 270
           VEQ                  IFKALEEAGI AGIYHGQMDKK+RAESHRL+
Sbjct: 241 VEQ------------------IFKALEEAGISAGIYHGQMDKKSRAESHRLF 274

[Close]
BLAST of CmoCh07G011950 vs. NCBI nr
Match: gi|700198758|gb|KGN53916.1| (hypothetical protein Csa_4G188732 [Cucumis sativus])

HSP 1 Score: 379.4 bits (973), Expect = 5.4e-102
Identity = 189/222 (85.14%), Postives = 199/222 (89.64%), Query Frame = 1 

Query: 48  MALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVPISFWSKLQKAGICLF 107
           MALKQRGI SEYLGSTQTDSTVQAKAE+GQYN+LFMTPEKACSVP+SFWSKL+KAGICLF
Sbjct: 1   MALKQRGIKSEYLGSTQTDSTVQAKAESGQYNVLFMTPEKACSVPMSFWSKLKKAGICLF 60

Query: 108 AVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVALTATATAKVRSDIISSLKMKDPQV 167
           AVDEAHCISEWGHDFRVEYK+LDKLRDVLP LPFVALTATAT KVRSDII+SLKMKDPQV
Sbjct: 61  AVDEAHCISEWGHDFRVEYKQLDKLRDVLPDLPFVALTATATEKVRSDIINSLKMKDPQV 120

Query: 168 TIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLASGGSTIIYCTTIKDVEQIFVKDAR 227
           TIGSFDRTNLFYGVKSFNRGPLF+NE VLDISKY+ASGGSTIIYCTTIKDVEQ       
Sbjct: 121 TIGSFDRTNLFYGVKSFNRGPLFMNEFVLDISKYVASGGSTIIYCTTIKDVEQ------- 180

Query: 228 SGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARAESHRLY 270
                      IFKALEEAGI AGIYHGQMDKK+RAESHRL+
Sbjct: 181 -----------IFKALEEAGISAGIYHGQMDKKSRAESHRLF 204

[Close]
BLAST of CmoCh07G011950 vs. NCBI nr
Match: gi|659082746|ref|XP_008442011.1| (PREDICTED: Werner syndrome ATP-dependent helicase-like isoform X1 [Cucumis melo])

HSP 1 Score: 376.7 bits (966), Expect = 3.5e-101
Identity = 196/257 (76.26%), Postives = 209/257 (81.32%), Query Frame = 1 

Query: 25  GHGYWKWQVLMVPPLVVGKTGIV------------MALKQRGIMSEYLGSTQTDSTVQAK 84
           G G  K     VPPLVVGKTGIV            MALKQRGI SEYLGS+QTD TVQ K
Sbjct: 36  GTGSGKSLCYQVPPLVVGKTGIVVSPLISLMQDQVMALKQRGIKSEYLGSSQTDYTVQDK 95

Query: 85  AENGQYNILFMTPEKACSVPISFWSKLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKL 144
           AE GQYNILFMTPEKACSV +SFWSKL+K GICLFAVDEAHCISEWGHDFRVEYK+LDKL
Sbjct: 96  AERGQYNILFMTPEKACSVSMSFWSKLKKEGICLFAVDEAHCISEWGHDFRVEYKQLDKL 155

Query: 145 RDVLPGLPFVALTATATAKVRSDIISSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLN 204
           RDVLPGLPFVALTATAT KVRSDII+SLKMKDPQVTIGSFDRTNLFYGV+SF+RGPLF+N
Sbjct: 156 RDVLPGLPFVALTATATEKVRSDIINSLKMKDPQVTIGSFDRTNLFYGVRSFDRGPLFMN 215

Query: 205 ELVLDISKYLASGGSTIIYCTTIKDVEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGI 264
           +LVLDISKY+ASGGSTIIYCTTIKDVEQ                  I KALEEAGI AGI
Sbjct: 216 KLVLDISKYVASGGSTIIYCTTIKDVEQ------------------ISKALEEAGISAGI 274

Query: 265 YHGQMDKKARAESHRLY 270
           YH QMDK++RAESHRL+
Sbjct: 276 YHAQMDKESRAESHRLF 274

[Close]
BLAST of CmoCh07G011950 vs. NCBI nr
Match: gi|778692433|ref|XP_011653464.1| (PREDICTED: Werner syndrome ATP-dependent helicase homolog [Cucumis sativus])

HSP 1 Score: 375.9 bits (964), Expect = 6.0e-101
Identity = 205/292 (70.21%), Postives = 219/292 (75.00%), Query Frame = 1 

Query: 1   MEAILKAVSERSHSGHSSREGLLG-----------GHGYWKWQVLMVPPLVVGKTGIV-- 60
           MEAILK+    S      +E + G           G G  K     +PPLVVGKTGIV  
Sbjct: 1   MEAILKSYFGFSAFRPYQKEVIQGILRGKDCLVVKGTGSGKSLCYQLPPLVVGKTGIVVS 60

Query: 61  ----------MALKQRGIMSEYLGSTQTDSTVQAKAENGQYNILFMTPEKACSVPISFWS 120
                     MALKQRGI SEYLGSTQTD TVQ KAE GQYNILFMTPEKACSV  SFWS
Sbjct: 61  PLISLMQDQVMALKQRGIKSEYLGSTQTDYTVQHKAERGQYNILFMTPEKACSVSTSFWS 120

Query: 121 KLQKAGICLFAVDEAHCISEWGHDFRVEYKRLDKLRDVLPGLPFVALTATATAKVRSDII 180
           KL+ AGICLFAVDEAHCISEWGHDFRVEYK+LDKLRDVLPGLPFVALTATAT KVR+DII
Sbjct: 121 KLKTAGICLFAVDEAHCISEWGHDFRVEYKQLDKLRDVLPGLPFVALTATATEKVRNDII 180

Query: 181 SSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFLNELVLDISKYLASGGSTIIYCTTIKD 240
           +SLKMKDPQVTIGSFDRTNLFYGVKSF+RGPLF+N+LVLDISKY+ASGGSTIIYCTTIKD
Sbjct: 181 NSLKMKDPQVTIGSFDRTNLFYGVKSFDRGPLFMNKLVLDISKYVASGGSTIIYCTTIKD 240

Query: 241 VEQIFVKDARSGLCRRTYRLAIFKALEEAGICAGIYHGQMDKKARAESHRLY 270
           VEQ                  I KALEEAGI AGIYHG MDK +RAESHRL+
Sbjct: 241 VEQ------------------ISKALEEAGISAGIYHGLMDKTSRAESHRLF 274

The following BLAST results are available for this feature:
BLAST of CmoCh07G011950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WRN_XENLA2.2e-3438.43Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis GN=wrn PE=2 SV=... [more]
WRN_HUMAN4.1e-3334.63Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=2[more]
WRN_MOUSE1.2e-3238.84Werner syndrome ATP-dependent helicase homolog OS=Mus musculus GN=Wrn PE=1 SV=3[more]
RQL3_ARATH2.5e-3035.95ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana GN=RECQL3 PE=1 SV=1[more]
MED34_ARATH6.1e-2937.45Mediator of RNA polymerase II transcription subunit 34 OS=Arabidopsis thaliana G... [more]
BLAST of CmoCh07G011950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1A4_CUCSA3.8e-10285.14Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188732 PE=4 SV=1[more]
A0A0A0KWB6_CUCSA4.2e-10170.21Uncharacterized protein OS=Cucumis sativus GN=Csa_4G188670 PE=4 SV=1[more]
M5W6N4_PRUPE3.8e-8660.87Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001081mg PE=4 SV=1[more]
A0A0S3S5R8_PHAAN7.9e-8467.89Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G163400 PE=... [more]
A0A0L9VCG5_PHAAN7.9e-8467.89Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g141500 PE=4 SV=1[more]
BLAST of CmoCh07G011950 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35740.11.4e-3135.95 DEAD/DEAH box RNA helicase family protein [more]
AT1G31360.13.4e-3037.45 RECQ helicase L2[more]
AT1G10930.15.7e-2531.12 DNA helicase (RECQl4A)[more]
AT5G27680.19.7e-2536.41 RECQ helicase SIM[more]
AT1G60930.19.7e-2531.40 RECQ helicase L4B[more]
BLAST of CmoCh07G011950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082754|ref|XP_008442015.1|2.5e-10773.29PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X1 [Cucumis me... [more]
gi|778692430|ref|XP_011653463.1|5.6e-10773.29PREDICTED: ATP-dependent DNA helicase Q-like SIM [Cucumis sativus][more]
gi|700198758|gb|KGN53916.1|5.4e-10285.14hypothetical protein Csa_4G188732 [Cucumis sativus][more]
gi|659082746|ref|XP_008442011.1|3.5e-10176.26PREDICTED: Werner syndrome ATP-dependent helicase-like isoform X1 [Cucumis melo][more]
gi|778692433|ref|XP_011653464.1|6.0e-10170.21PREDICTED: Werner syndrome ATP-dependent helicase homolog [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006310 DNA recombination
cellular_component GO:0005622 intracellular
molecular_function GO:0005524 ATP binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G011950.1CmoCh07G011950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainPROFILEPS51192HELICASE_ATP_BIND_1coord: 30..166
score: 13
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 45..167
score: 5.4E-26coord: 168..267
score: 3.
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 31..265
score: 3.98
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 250..267
score: 6.4E-85coord: 36..231
score: 6.4
NoneNo IPR availablePANTHERPTHR13710:SF87WERNER SYNDROME ATP-DEPENDENT HELICASEcoord: 36..231
score: 6.4E-85coord: 250..267
score: 6.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G011950CsaV3_4G012080Cucumber (Chinese Long) v3cmocucB1000
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G011950Cucurbita pepo (Zucchini)cmocpeB807
CmoCh07G011950Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G011950Bottle gourd (USVL1VR-Ls)cmolsiB779
CmoCh07G011950Cucumber (Gy14) v2cgybcmoB538
CmoCh07G011950Cucumber (Gy14) v2cgybcmoB548
CmoCh07G011950Melon (DHL92) v3.6.1cmomedB888
CmoCh07G011950Silver-seed gourdcarcmoB0795
CmoCh07G011950Silver-seed gourdcarcmoB0864
CmoCh07G011950Watermelon (97103) v2cmowmbB868
CmoCh07G011950Wax gourdcmowgoB1064
CmoCh07G011950Cucurbita moschata (Rifu)cmocmoB456
CmoCh07G011950Cucumber (Gy14) v1cgycmoB0918
CmoCh07G011950Cucurbita maxima (Rimu)cmacmoB668
CmoCh07G011950Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G011950Wild cucumber (PI 183967)cmocpiB857
CmoCh07G011950Cucumber (Chinese Long) v2cmocuB848
CmoCh07G011950Melon (DHL92) v3.5.1cmomeB785
CmoCh07G011950Watermelon (Charleston Gray)cmowcgB770
CmoCh07G011950Watermelon (97103) v1cmowmB826