CmoCh07G011140 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G011140
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description26S proteasome regulatory subunit N8
LocationCmo_Chr07 : 5880177 .. 5884478 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCACGATAGTAGGAAGACTATGAGAAGATGTAGTAAGGAACAATTGTACTCTTTTAAAGTGATTTTAATGCCTCATATTTCACAGAATGCTACTCAGAAGAGCCAAAAGATTTTTGTGCATGTGCCTTCAGAAATTGGAGCACACGAGGTTGAGGAAATTGGTAATTCCCGTGGGACAGAAAATTGCATTTCTATTTATGGGGTATCTCATGTAAGAATTGAATTTTCTCACCCTGCTCATCAACAGGAGTTGCACACTTACTAAGAGATGTTAAAGACGCCGCCATCAGCACGCTTGCTACTGAGGTCTGTCAGATTACTTCCATATTCATCTTTACACTTCACCTTTACTTCAAAGTGTGTGTGTGTGTGTGTGTATATTGATGAAAAACTAAACTTTCATTGAGAAAAAATGAAAGATACCTCAGTATATATCAAGTAATTGGGAGTGCCTTATGGCTCACAAAAAAAAAAAAAAATAACGGAGAAATTTGAGTTGAATGAAGTTTCATTTTGCAGGTTTCTGGAAAGCTTACAGGTCTAAAAGGTTTGGATTCAAGTTTGCGAGAGATTCGCAGTTACCTTGACCTTGTTGTGGATGAAAAACTTCCTATAAATCATGAGATTCTATACTATTTACAGGTTCAATTTATGACATGTCCACTCTGCTTGCCGTCTCATTGTTTTTTTATGCATTCCCATATTGTATTTTTATTGAATACAGTACAAGATGTATTTTCTATGTTATAAGTTGGAAAGAAAGGTTAGAAGATAAGACATACTCCCCCTAGACATACCAGCATATTAAACAGAGTCTTAATTCCACTTACAACTACAGTATATCATGCCTCTATGTGAAAACTATCATCCTAAAGAGGCTTTAAAATATCACCCAGACTGAGGAAACAACTTCAATATTATGTCAGTAACCGGTGAGACTTTTTAAATTCTCTTCCAATGCCCTATTACGTTCCAACAACATCTGCTACTTACTAAGCTGAATGAGCCCATTGTTCTCGAACTTCTCTTATTCTGTGCTTTGATTGTTTTCATGGTATGCATCTTGTCTGTTATATTGAGATATGATTTAAAGTAGTTAAAATATGATTTAAAGTATTGAATTTAAAGTGGTTAGATATGATTCAAAGTACCAAGGTTATAGGAGATTGTGAGTAGATTTGAATTTATCTCGGATTTTCATAATTTACTATTTCTAGTTAGTGCTATAAATATTAGAATTGCTTAACTCCGGAGAAAACAATAATAAAGCATTGCAACTTTTATCTATTCCTATCTCTTTCAATATTTCTTTTCCCAATAAATTTGATATTAGAGCCAAGTTCTTTATCAACGAAGTGAATGATTATATTTTTTCACACAACGAAAATGGTAGTACTTGATTTTTTTTCTTTGCACTGCTGTTACCTATTCTTAATGGTGAGAAATATGAGTGGTGGAGCATCAAGATGAAGACCTTGCTCAGATCGCAAGAGTTGTGAGACTTGGTGGAGCACGGGTTCGTTGATGTATTAGAACCCTTCAATAGAAGAAAAGGAGAGACTAAGAGAAACCAAGAAAAATGATGCCAACGCTCTATTCATTATTCAGCAAACAATTCATGAGACTATTTTTTCCCGAATTGCAGCAGCAACCATATCAAAGCAAGCATGGTCAATTTTATAGAAGGAGTTTCAGGGAGATTCAAAGGTCGTAACAGTGAAATTGCAATCTCTAAGACGTGATTTTGAAACTCTGCTCATGACAAATAGCGAATTAATTGCTAACTTTTTGTCAAGAGCAATGGCAATAGTCAGTCAAATGCGTACCTATGGAGAGAAAATTTCAAATGAAACAATTGTTGCAAAGGTGTTGAGAAGCTTAACTCCAAAGCTTGACAATGTGGTGGCTGCCATAAAAGAACCTAAGGATCTATCAATACTTTCCATTGATGAACTGATGGGCTCGCTTCAGGCTCATGAGTCAAGAATCAATAGATCATCAGATAGGAATGAAGAAAAGACACTACAAGTGATGGAGACAACCAACAATGAAAGCAATGAAAGAGAAAATATCCATTTAGCAGGTAGAAGTCGTGGAAGAGGAGACTTTCGCAGCTTCCATGGTGATAGTGATAACAGGGATAGATGGAGAAATGATGGACAAAGGCAGTTCAATATAAGGAGGGTCTTACAATGTTACCATTGCAGAAGGTCCCACACAAAAGCTGATTGTTGGTATAGAGATCAACAAATGAATTTCACAACAGAAAATGAAGAAGAGGAAGAAAAGCTTTTCATGACGTGTACTGGTATTAATCCAAAGAAAGGTGACTTATGGTTTGTTGATAGCTGATGCTCGAACCATATGACAAGTACCTAATTCTTATTCCAAGAACTTGATGATACGCAAAGAATTAAGATGCAACTTGGAAATATAAAAGAGATGCCGTCCATTGAGAAAGCCATGGTAGAAGAGATGCAGCCATGGTAGAAGAGATACAGTCCATGAGAAAACCATGGTAGAAGAGATACAGTCCATTGAGAAAGCCATAGTAGAAGAGATGCAGTCCTTTGAGAAAGTCATAGTAAAAGAGATGCAGTCCATTGAGAAAGCCATGGTAGAAGAGATGAAGAGATGTAGCCATTGAAAAAAATGGAACATGGGATATGGTTGACTTTCCCAATGAAAAGTTCTATCCATGTAGTCCATTGCGGTGGCCTGTTTATTAGTTTTTTAGAGATTTACAAAAAGAGGTCTATGTAATGCACAAGAGGGATTCATAATGAAAGACAAAGAAACAAAGGTATACAAGCTAAGACACATTATAAGGGTTAAAGTAGACATACTTACTAAAGTTTTGTCAAAAGAAAAATTCTGCTAATTCAGACAATTATTTGAACTTTGAATCAAGGGGAGTGTTGAAATATGATTCAAAGTATAGTATTAAGATTTTAAGAGGTTAGTAGATTTGAATTTATTTAGGATTTTCATAAATTTACTATTTCTGATAGTGTATAAGCCTATCAATATTGAAATTGTGTAACTTTTAAGGGTAACAATAAAGTGCAGCTTTTATATATTCCTATCTCTTTCAATATCCCTTTCTCCAACATGTTATGTATGTTTCTTATAGAATGGATGAATCTACTTCCCCTTTGTTTGTCTGCCTGCAAATAGTGATGCCAAATCTGTTCAGTACATGTTGCTTGGAACAGCCCACATATATATTCTTTGAGGATTCTTAATACAGTGTATTTTCTTGTATCATTGACTACAGGATGTATTCAACCTGTTTCCTAATCTGAATGTGGCTAATTTGGTTAAAGCGTTTTCAGGTAAACTAAATCGCAGCCTTTAAATATGCTGGTCATGGGATAGTTGTGTTTAGCTAGTTCATAACTTGATCTATATCAACCCCTTTATGCAGTAAAAACTAATGATATGTTGCTGGTCATATATCTCTCTTCTTTTATCCGAAGTGTGATTGCACTCCATAACTTGATTAGAAACAAGGTAACATCCTCTTTAATTTGGTGCTTGCTAATATATTCACTGGAATCATGATCTGATGGTTATTATCTCTCATCAACAAATGTAAAGATGTTAAATAAAGAGCACGAGAAAGCAGAGGATGCAAAATCCGCTAGTGTTGCAGCTTCATCAGGAAAGTAAGTCTTATGTTTGCTTGTCGGTTGAAGATACTTATTATAACTGCGGTCGCGGCTTCTTTCTCAACAACTATGCTTCTCCTACATTGCACAAAGCAAGACTCTACAAAAGAACCAGGTGCTCTCAATATTTCTCATTCCTTCTTTGGTTATATGATTTACTTCAATTTTTCTCTATATTTCTCAAAACTTGAACCGCTGATCTTTGTTAGTCAGTGAACCATATCTTAGTCACTAGATTGTTACATCTTTTGTTTTGAGTGGTTTATAGATTTTGGAATCTTAAATACTTTGTTTTTTTGGACATCTTTTTCGCAATTTATGTTTCTTCCCCNCCCCCCCCCTTCAAGTAAGTATTCTTCTTAGATAGTGTGTCAAAGAAGGATAATATGCAATGAAATCCTTTGCATGGAGTGGCCCCTCCAGACTGTGACAATGGAAATATTCTAGTTTTGAAGGTTTTGTTTGTTTAGAAGGCTTTTGAAAAAAGCTGTTGATGCTCCTCTTATCTTTGAATTCAAAAGAAAAAGAGGCCATTTTTTGAATGAAGAAATTTAGCAAATGTTTTTGTTGTTTCTTATATGGACAACCATTTTGATTTTTAACTTCATTTTAGTTTATGTGAATGA

mRNA sequence

ATGGATCACGATAGTAGGAAGACTATGAGAAGATGTAGTAAGGAACAATTGTACTCTTTTAAAGTGATTTTAATGCCTCATATTTCACAGAATGCTACTCAGAAGAGCCAAAAGATTTTTGTGCATGTGCCTTCAGAAATTGGAGCACACGAGGTTGAGGAAATTGGAGTTGCACACTTACTAAGAGATGTTAAAGACGCCGCCATCAGCACGCTTGCTACTGAGGTTTCTGGAAAGCTTACAGGTCTAAAAGGTTTGGATTCAAGTTTGCGAGAGATTCGCAGTTACCTTGACCTTGTTGTGGATGAAAAACTTCCTATAAATCATGAGATTCTATACTATTTACAGGATGTATTCAACCTGTTTCCTAATCTGAATGTGGCTAATTTGGTTAAAGCGTTTTCAGTAAAAACTAATGATATGTTGCTGGTCATATATCTCTCTTCTTTTATCCGAAGTGTGATTGCACTCCATAACTTGATTAGAAACAAGATGTTAAATAAAGAGCACGAGAAAGCAGAGGATGCAAAATCCGCTAGTGTTGCAGCTTCATCAGGAAATTTATGTGAATGA

Coding sequence (CDS)

ATGGATCACGATAGTAGGAAGACTATGAGAAGATGTAGTAAGGAACAATTGTACTCTTTTAAAGTGATTTTAATGCCTCATATTTCACAGAATGCTACTCAGAAGAGCCAAAAGATTTTTGTGCATGTGCCTTCAGAAATTGGAGCACACGAGGTTGAGGAAATTGGAGTTGCACACTTACTAAGAGATGTTAAAGACGCCGCCATCAGCACGCTTGCTACTGAGGTTTCTGGAAAGCTTACAGGTCTAAAAGGTTTGGATTCAAGTTTGCGAGAGATTCGCAGTTACCTTGACCTTGTTGTGGATGAAAAACTTCCTATAAATCATGAGATTCTATACTATTTACAGGATGTATTCAACCTGTTTCCTAATCTGAATGTGGCTAATTTGGTTAAAGCGTTTTCAGTAAAAACTAATGATATGTTGCTGGTCATATATCTCTCTTCTTTTATCCGAAGTGTGATTGCACTCCATAACTTGATTAGAAACAAGATGTTAAATAAAGAGCACGAGAAAGCAGAGGATGCAAAATCCGCTAGTGTTGCAGCTTCATCAGGAAATTTATGTGAATGA
Homology
[Close]
BLAST of CmoCh07G011140 vs. Swiss-Prot
Match: PSD7A_ARATH (26S proteasome non-ATPase regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPN8A PE=1 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-62
Identity = 124/158 (78.48%), Postives = 140/158 (88.61%), Query Frame = 1 

Query: 28  ISQNATQKSQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLD 87
           + +NATQKSQK+FVHV +EI AHEVEEIGV HLLRDVKD  ISTLATEV+ KLT LKGLD
Sbjct: 151 VKENATQKSQKVFVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTAKLTALKGLD 210

Query: 88  SSLREIRSYLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYL 147
           + LREIRSYLDLV++ KLP+NHEILY+LQDVFNL PNLNV  LVKAFSVKTNDM+LVIYL
Sbjct: 211 ARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFSVKTNDMMLVIYL 270

Query: 148 SSFIRSVIALHNLIRNKMLNKEHEKAEDAKSASVAASS 186
           SS IRSVIALHNLI NK+LNKEHEKAED+K  ++ A+S
Sbjct: 271 SSLIRSVIALHNLINNKLLNKEHEKAEDSKPVAIPATS 308

[Close]
BLAST of CmoCh07G011140 vs. Swiss-Prot
Match: PSD7B_ARATH (26S proteasome non-ATPase regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPN8B PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.1e-61
Identity = 119/154 (77.27%), Postives = 137/154 (88.96%), Query Frame = 1 

Query: 28  ISQNATQKSQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLD 87
           + +NATQKSQ++FVHVP+EI AHEVEEIGV HLLRDVKD  ISTLATEV+ KLT LKGLD
Sbjct: 151 VKENATQKSQQVFVHVPTEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTAKLTALKGLD 210

Query: 88  SSLREIRSYLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYL 147
           + LREIR+YLDLV++ KLP+NHEILY+LQDVFNL PNLNV  LVKAF+VKTNDM+LVIYL
Sbjct: 211 ARLREIRTYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFAVKTNDMMLVIYL 270

Query: 148 SSFIRSVIALHNLIRNKMLNKEHEKAEDAKSASV 182
           SS IRSVIALH+LI NK+LNKEHEKAED+K   +
Sbjct: 271 SSLIRSVIALHSLINNKLLNKEHEKAEDSKPVDI 304

[Close]
BLAST of CmoCh07G011140 vs. Swiss-Prot
Match: PSMD7_HUMAN (26S proteasome non-ATPase regulatory subunit 7 OS=Homo sapiens GN=PSMD7 PE=1 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 2.6e-39
Identity = 80/139 (57.55%), Postives = 107/139 (76.98%), Query Frame = 1 

Query: 36  SQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLDSSLREIRS 95
           + K F HV SEIGA E EE+GV HLLRD+KD  + TL+  ++ ++ GLKGL+S L +IRS
Sbjct: 151 TSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRS 210

Query: 96  YLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYLSSFIRSVI 155
           YL+ V   KLPINH+I+Y LQDVFNL P++++   VKAF +KTND ++V+YL+S IRSV+
Sbjct: 211 YLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQMVVVYLASLIRSVV 270

Query: 156 ALHNLIRNKMLNKEHEKAE 175
           ALHNLI NK+ N++ EK E
Sbjct: 271 ALHNLINNKIANRDAEKKE 289

[Close]
BLAST of CmoCh07G011140 vs. Swiss-Prot
Match: PSMD7_MOUSE (26S proteasome non-ATPase regulatory subunit 7 OS=Mus musculus GN=Psmd7 PE=1 SV=2)

HSP 1 Score: 162.9 bits (411), Expect = 3.4e-39
Identity = 80/139 (57.55%), Postives = 106/139 (76.26%), Query Frame = 1 

Query: 36  SQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLDSSLREIRS 95
           + K F HV SEIGA E EE+GV HLLRD+KD  + TL+  ++ ++ GLKGL+S L +IRS
Sbjct: 151 TSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRS 210

Query: 96  YLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYLSSFIRSVI 155
           YL+ V   KLPINH+I+Y LQDVFNL P+ ++   VKAF +KTND ++V+YL+S IRSV+
Sbjct: 211 YLEKVASGKLPINHQIIYQLQDVFNLLPDASLQEFVKAFYLKTNDQMVVVYLASLIRSVV 270

Query: 156 ALHNLIRNKMLNKEHEKAE 175
           ALHNLI NK+ N++ EK E
Sbjct: 271 ALHNLINNKIANRDAEKKE 289

[Close]
BLAST of CmoCh07G011140 vs. Swiss-Prot
Match: PSMD7_BOVIN (26S proteasome non-ATPase regulatory subunit 7 OS=Bos taurus GN=PSMD7 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.5e-39
Identity = 79/139 (56.83%), Postives = 106/139 (76.26%), Query Frame = 1 

Query: 36  SQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLDSSLREIRS 95
           + K F HV SEIGA E EE+GV HLLRD+KD  + TL+  ++ ++ GLKGL+S L +IR 
Sbjct: 151 TSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRG 210

Query: 96  YLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYLSSFIRSVI 155
           YL+ V   KLPINH+I+Y LQDVFNL P++++   VKAF +KTND ++V+YL+S IRSV+
Sbjct: 211 YLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQMVVVYLASLIRSVV 270

Query: 156 ALHNLIRNKMLNKEHEKAE 175
           ALHNLI NK+ N++ EK E
Sbjct: 271 ALHNLINNKIANRDAEKKE 289

[Close]
BLAST of CmoCh07G011140 vs. TrEMBL
Match: A0A061ERJ9_THECC (RP non-ATPase subunit 8A OS=Theobroma cacao GN=TCM_021739 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.1e-64
Identity = 130/160 (81.25%), Postives = 145/160 (90.62%), Query Frame = 1 

Query: 28  ISQNATQKSQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLD 87
           + +NATQKSQK+FVHVPSEI AHEVEEIGV HLLRDVKD  ISTLATEV+GKLT LKGLD
Sbjct: 151 VKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLTALKGLD 210

Query: 88  SSLREIRSYLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYL 147
           + LREIR+YLDLV+DEKLP+NHEILY+LQDVFNL PNLNV  L+KAF+VKTNDM+LVIYL
Sbjct: 211 ARLREIRAYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVNELIKAFAVKTNDMMLVIYL 270

Query: 148 SSFIRSVIALHNLIRNKMLNKEHEKAEDAKSASVAASSGN 188
           SS IRSVIALHNLI NKMLNKEHEKAEDAK A+V A+S +
Sbjct: 271 SSLIRSVIALHNLINNKMLNKEHEKAEDAKPATVPAASSS 310

[Close]
BLAST of CmoCh07G011140 vs. TrEMBL
Match: M5WC05_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009004mg PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.6e-64
Identity = 131/160 (81.88%), Postives = 143/160 (89.38%), Query Frame = 1 

Query: 28  ISQNATQKSQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLD 87
           + +NATQKSQKIFVHVPSEI AHEVEEIGV HLLRDVKD  ISTLA EV+GKLT LKGLD
Sbjct: 151 VKENATQKSQKIFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLD 210

Query: 88  SSLREIRSYLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYL 147
           + LREIRSYLDLV+DEKLP+NHEILY+LQDVFNL PNLNVA LVK FSVKTNDM+LVIYL
Sbjct: 211 ARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELVKGFSVKTNDMMLVIYL 270

Query: 148 SSFIRSVIALHNLIRNKMLNKEHEKAEDAKSASVAASSGN 188
           SS IRSVIALHNLI NKMLNKEHEKAEDAK A+  + +G+
Sbjct: 271 SSLIRSVIALHNLINNKMLNKEHEKAEDAKPATAPSVAGS 310

[Close]
BLAST of CmoCh07G011140 vs. TrEMBL
Match: A0A0D2RD01_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G262000 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 4.7e-64
Identity = 130/158 (82.28%), Postives = 144/158 (91.14%), Query Frame = 1 

Query: 28  ISQNATQKSQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLD 87
           + +NATQKSQKIFVHVPSEI AHEVEEIGV HLLRDVKD  ISTLATEV+GKLT LKGLD
Sbjct: 151 VKENATQKSQKIFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLTALKGLD 210

Query: 88  SSLREIRSYLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYL 147
           + L+EIRSYLDLV+DEKLP+NHEILY+LQDVFNL PNLNV +L+KAF+VKTNDM+LVIYL
Sbjct: 211 ARLKEIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVNDLIKAFAVKTNDMMLVIYL 270

Query: 148 SSFIRSVIALHNLIRNKMLNKEHEKAEDAKSASVAASS 186
           SS IRSVIALHNLI NKMLNKEHEKAEDAK  +V A+S
Sbjct: 271 SSLIRSVIALHNLINNKMLNKEHEKAEDAKPTTVPATS 308

[Close]
BLAST of CmoCh07G011140 vs. TrEMBL
Match: W9R630_9ROSA (Putative 26S proteasome non-ATPase regulatory subunit 7 OS=Morus notabilis GN=L484_026375 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.1e-64
Identity = 129/160 (80.62%), Postives = 145/160 (90.62%), Query Frame = 1 

Query: 28  ISQNATQKSQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLD 87
           + +NATQKSQK+FVHVPSEI AHEVEEIGV HLLRDVKD  ISTLATEV+GKLT LKGLD
Sbjct: 151 VKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLTALKGLD 210

Query: 88  SSLREIRSYLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYL 147
           S LREIRSYLDLVVDEKLP+NHEILY+LQ+VFNL PNLN++ LVKAF+VKTNDM+LVIYL
Sbjct: 211 SRLREIRSYLDLVVDEKLPLNHEILYHLQNVFNLLPNLNISELVKAFAVKTNDMMLVIYL 270

Query: 148 SSFIRSVIALHNLIRNKMLNKEHEKAEDAKSASVAASSGN 188
           SS IRSVIALHNLI NK+LNKEHEKAED+K  +V  +SG+
Sbjct: 271 SSLIRSVIALHNLINNKILNKEHEKAEDSKPVAVPTASGS 310

[Close]
BLAST of CmoCh07G011140 vs. TrEMBL
Match: A0A162A8V3_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_015448 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.0e-63
Identity = 128/160 (80.00%), Postives = 145/160 (90.62%), Query Frame = 1 

Query: 28  ISQNATQKSQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLD 87
           + +NATQKSQK+FVHVPSEI AHEVEEIGV HLLRDVKD  ISTLATEV+GKL  LKGLD
Sbjct: 151 VKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLAALKGLD 210

Query: 88  SSLREIRSYLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYL 147
           + LREIR+YLDLV+DEKLP+NHEILY+LQDVFNL PNLNVA+L+KAF+VKTND +LVIYL
Sbjct: 211 ARLREIRNYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVADLIKAFAVKTNDQMLVIYL 270

Query: 148 SSFIRSVIALHNLIRNKMLNKEHEKAEDAKSASVAASSGN 188
           SS IRSVIALHNLI NKMLNKEHEKAEDAK A+V+  +G+
Sbjct: 271 SSLIRSVIALHNLINNKMLNKEHEKAEDAKPATVSPVAGS 310

[Close]
BLAST of CmoCh07G011140 vs. TAIR10
Match: AT5G05780.1 (AT5G05780.1 RP non-ATPase subunit 8A)

HSP 1 Score: 240.7 bits (613), Expect = 7.2e-64
Identity = 124/158 (78.48%), Postives = 140/158 (88.61%), Query Frame = 1 

Query: 28  ISQNATQKSQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLD 87
           + +NATQKSQK+FVHV +EI AHEVEEIGV HLLRDVKD  ISTLATEV+ KLT LKGLD
Sbjct: 151 VKENATQKSQKVFVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTAKLTALKGLD 210

Query: 88  SSLREIRSYLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYL 147
           + LREIRSYLDLV++ KLP+NHEILY+LQDVFNL PNLNV  LVKAFSVKTNDM+LVIYL
Sbjct: 211 ARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFSVKTNDMMLVIYL 270

Query: 148 SSFIRSVIALHNLIRNKMLNKEHEKAEDAKSASVAASS 186
           SS IRSVIALHNLI NK+LNKEHEKAED+K  ++ A+S
Sbjct: 271 SSLIRSVIALHNLINNKLLNKEHEKAEDSKPVAIPATS 308

[Close]
BLAST of CmoCh07G011140 vs. TAIR10
Match: AT3G11270.1 (AT3G11270.1 Mov34/MPN/PAD-1 family protein)

HSP 1 Score: 235.7 bits (600), Expect = 2.3e-62
Identity = 119/154 (77.27%), Postives = 137/154 (88.96%), Query Frame = 1 

Query: 28  ISQNATQKSQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLD 87
           + +NATQKSQ++FVHVP+EI AHEVEEIGV HLLRDVKD  ISTLATEV+ KLT LKGLD
Sbjct: 151 VKENATQKSQQVFVHVPTEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTAKLTALKGLD 210

Query: 88  SSLREIRSYLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYL 147
           + LREIR+YLDLV++ KLP+NHEILY+LQDVFNL PNLNV  LVKAF+VKTNDM+LVIYL
Sbjct: 211 ARLREIRTYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFAVKTNDMMLVIYL 270

Query: 148 SSFIRSVIALHNLIRNKMLNKEHEKAEDAKSASV 182
           SS IRSVIALH+LI NK+LNKEHEKAED+K   +
Sbjct: 271 SSLIRSVIALHSLINNKLLNKEHEKAEDSKPVDI 304

[Close]
BLAST of CmoCh07G011140 vs. NCBI nr
Match: gi|657991882|ref|XP_008388190.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 7 homolog A-like [Malus domestica])

HSP 1 Score: 254.2 bits (648), Expect = 1.8e-64
Identity = 131/160 (81.88%), Postives = 145/160 (90.62%), Query Frame = 1 

Query: 28  ISQNATQKSQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLD 87
           + +NATQKSQKIFVHVPSEI AHEVEEIGV HLLRDVKD  ISTLA EV+GKLT LKGLD
Sbjct: 151 VKENATQKSQKIFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLD 210

Query: 88  SSLREIRSYLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYL 147
           + LREIRSYLDLV+DEKLP+NHEILY+LQDVFNL PNLNVA+LVK FSVKTNDM+LVIYL
Sbjct: 211 ARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVADLVKGFSVKTNDMMLVIYL 270

Query: 148 SSFIRSVIALHNLIRNKMLNKEHEKAEDAKSASVAASSGN 188
           SS IRSVIALHNLI NK+LNKEHEKAEDAK A+ ++ +GN
Sbjct: 271 SSLIRSVIALHNLINNKVLNKEHEKAEDAKPATASSVAGN 310

[Close]
BLAST of CmoCh07G011140 vs. NCBI nr
Match: gi|720021663|ref|XP_010262793.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 7 homolog A-like [Nelumbo nucifera])

HSP 1 Score: 253.4 bits (646), Expect = 3.0e-64
Identity = 129/160 (80.62%), Postives = 145/160 (90.62%), Query Frame = 1 

Query: 28  ISQNATQKSQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLD 87
           + +NATQKSQK+F+HVPSEI AHEVEEIGV HLLRDVKD  ISTLATEV+GKL  LKGLD
Sbjct: 151 VKENATQKSQKVFMHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLAALKGLD 210

Query: 88  SSLREIRSYLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYL 147
           + LREIR YLDLVVDEKLP+NHEILY+LQDVFNL PNLNVA L+KAF+VKTNDM+LVIYL
Sbjct: 211 ARLREIRGYLDLVVDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFAVKTNDMMLVIYL 270

Query: 148 SSFIRSVIALHNLIRNKMLNKEHEKAEDAKSASVAASSGN 188
           SS IRSVIALHNLI NKMLNKEHEKAEDAK A++ A++G+
Sbjct: 271 SSLIRSVIALHNLINNKMLNKEHEKAEDAKPAAIPAAAGS 310

[Close]
BLAST of CmoCh07G011140 vs. NCBI nr
Match: gi|590628632|ref|XP_007026771.1| (RP non-ATPase subunit 8A [Theobroma cacao])

HSP 1 Score: 253.4 bits (646), Expect = 3.0e-64
Identity = 130/160 (81.25%), Postives = 145/160 (90.62%), Query Frame = 1 

Query: 28  ISQNATQKSQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLD 87
           + +NATQKSQK+FVHVPSEI AHEVEEIGV HLLRDVKD  ISTLATEV+GKLT LKGLD
Sbjct: 151 VKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLTALKGLD 210

Query: 88  SSLREIRSYLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYL 147
           + LREIR+YLDLV+DEKLP+NHEILY+LQDVFNL PNLNV  L+KAF+VKTNDM+LVIYL
Sbjct: 211 ARLREIRAYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVNELIKAFAVKTNDMMLVIYL 270

Query: 148 SSFIRSVIALHNLIRNKMLNKEHEKAEDAKSASVAASSGN 188
           SS IRSVIALHNLI NKMLNKEHEKAEDAK A+V A+S +
Sbjct: 271 SSLIRSVIALHNLINNKMLNKEHEKAEDAKPATVPAASSS 310

[Close]
BLAST of CmoCh07G011140 vs. NCBI nr
Match: gi|694389108|ref|XP_009370201.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 7 homolog A-like [Pyrus x bretschneideri])

HSP 1 Score: 253.1 bits (645), Expect = 4.0e-64
Identity = 131/160 (81.88%), Postives = 145/160 (90.62%), Query Frame = 1 

Query: 28  ISQNATQKSQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLD 87
           + +NATQKSQKIFVHVPSEI AHEVEEIGV HLLRDVKD  ISTLA EV+GKLT LKGLD
Sbjct: 151 VKENATQKSQKIFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLD 210

Query: 88  SSLREIRSYLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYL 147
           + L+EIRSYLDLV+DEKLP+NHEILY+LQDVFNL PNLNVA+LVK FSVKTNDM+LVIYL
Sbjct: 211 ARLQEIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVADLVKGFSVKTNDMMLVIYL 270

Query: 148 SSFIRSVIALHNLIRNKMLNKEHEKAEDAKSASVAASSGN 188
           SS IRSVIALHNLI NKMLNKEHEKAEDAK A+V + +G+
Sbjct: 271 SSLIRSVIALHNLINNKMLNKEHEKAEDAKPATVPSVAGS 310

[Close]
BLAST of CmoCh07G011140 vs. NCBI nr
Match: gi|595826634|ref|XP_007205604.1| (hypothetical protein PRUPE_ppa009004mg [Prunus persica])

HSP 1 Score: 252.7 bits (644), Expect = 5.2e-64
Identity = 131/160 (81.88%), Postives = 143/160 (89.38%), Query Frame = 1 

Query: 28  ISQNATQKSQKIFVHVPSEIGAHEVEEIGVAHLLRDVKDAAISTLATEVSGKLTGLKGLD 87
           + +NATQKSQKIFVHVPSEI AHEVEEIGV HLLRDVKD  ISTLA EV+GKLT LKGLD
Sbjct: 151 VKENATQKSQKIFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLD 210

Query: 88  SSLREIRSYLDLVVDEKLPINHEILYYLQDVFNLFPNLNVANLVKAFSVKTNDMLLVIYL 147
           + LREIRSYLDLV+DEKLP+NHEILY+LQDVFNL PNLNVA LVK FSVKTNDM+LVIYL
Sbjct: 211 ARLREIRSYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELVKGFSVKTNDMMLVIYL 270

Query: 148 SSFIRSVIALHNLIRNKMLNKEHEKAEDAKSASVAASSGN 188
           SS IRSVIALHNLI NKMLNKEHEKAEDAK A+  + +G+
Sbjct: 271 SSLIRSVIALHNLINNKMLNKEHEKAEDAKPATAPSVAGS 310

The following BLAST results are available for this feature:
BLAST of CmoCh07G011140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSD7A_ARATH1.3e-6278.4826S proteasome non-ATPase regulatory subunit 7 homolog A OS=Arabidopsis thaliana... [more]
PSD7B_ARATH4.1e-6177.2726S proteasome non-ATPase regulatory subunit 7 homolog B OS=Arabidopsis thaliana... [more]
PSMD7_HUMAN2.6e-3957.5526S proteasome non-ATPase regulatory subunit 7 OS=Homo sapiens GN=PSMD7 PE=1 SV=... [more]
PSMD7_MOUSE3.4e-3957.5526S proteasome non-ATPase regulatory subunit 7 OS=Mus musculus GN=Psmd7 PE=1 SV=... [more]
PSMD7_BOVIN7.5e-3956.8326S proteasome non-ATPase regulatory subunit 7 OS=Bos taurus GN=PSMD7 PE=2 SV=1[more]
BLAST of CmoCh07G011140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061ERJ9_THECC2.1e-6481.25RP non-ATPase subunit 8A OS=Theobroma cacao GN=TCM_021739 PE=4 SV=1[more]
M5WC05_PRUPE3.6e-6481.88Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009004mg PE=4 SV=1[more]
A0A0D2RD01_GOSRA4.7e-6482.28Uncharacterized protein OS=Gossypium raimondii GN=B456_002G262000 PE=4 SV=1[more]
W9R630_9ROSA6.1e-6480.63Putative 26S proteasome non-ATPase regulatory subunit 7 OS=Morus notabilis GN=L4... [more]
A0A162A8V3_DAUCA1.0e-6380.00Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_015448 PE=4 SV=1[more]
BLAST of CmoCh07G011140 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G05780.17.2e-6478.48 RP non-ATPase subunit 8A[more]
AT3G11270.12.3e-6277.27 Mov34/MPN/PAD-1 family protein[more]
BLAST of CmoCh07G011140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|657991882|ref|XP_008388190.1|1.8e-6481.88PREDICTED: 26S proteasome non-ATPase regulatory subunit 7 homolog A-like [Malus ... [more]
gi|720021663|ref|XP_010262793.1|3.0e-6480.63PREDICTED: 26S proteasome non-ATPase regulatory subunit 7 homolog A-like [Nelumb... [more]
gi|590628632|ref|XP_007026771.1|3.0e-6481.25RP non-ATPase subunit 8A [Theobroma cacao][more]
gi|694389108|ref|XP_009370201.1|4.0e-6481.88PREDICTED: 26S proteasome non-ATPase regulatory subunit 7 homolog A-like [Pyrus ... [more]
gi|595826634|ref|XP_007205604.1|5.2e-6481.88hypothetical protein PRUPE_ppa009004mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR024969Rpn11/EIF3F_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0000502 proteasome complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G011140.1CmoCh07G011140.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024969Rpn11/EIF3F, C-terminalPFAMPF13012MitMem_regcoord: 51..161
score: 3.2
NoneNo IPR availablePANTHERPTHR10540EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDcoord: 28..177
score: 3.7
NoneNo IPR availablePANTHERPTHR10540:SF726S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7coord: 28..177
score: 3.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G011140Cucurbita pepo (Zucchini)cmocpeB821
CmoCh07G011140Cucurbita pepo (Zucchini)cmocpeB802
CmoCh07G011140Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G011140Cucurbita pepo (Zucchini)cmocpeB832
CmoCh07G011140Bottle gourd (USVL1VR-Ls)cmolsiB774
CmoCh07G011140Bottle gourd (USVL1VR-Ls)cmolsiB787
CmoCh07G011140Bottle gourd (USVL1VR-Ls)cmolsiB788
CmoCh07G011140Cucumber (Gy14) v2cgybcmoB418
CmoCh07G011140Cucumber (Gy14) v2cgybcmoB537
CmoCh07G011140Cucumber (Gy14) v2cgybcmoB842
CmoCh07G011140Melon (DHL92) v3.6.1cmomedB881
CmoCh07G011140Silver-seed gourdcarcmoB0228
CmoCh07G011140Silver-seed gourdcarcmoB0757
CmoCh07G011140Silver-seed gourdcarcmoB0795
CmoCh07G011140Silver-seed gourdcarcmoB1344
CmoCh07G011140Cucumber (Chinese Long) v3cmocucB0997
CmoCh07G011140Cucumber (Chinese Long) v3cmocucB0999
CmoCh07G011140Cucumber (Chinese Long) v3cmocucB1010
CmoCh07G011140Cucumber (Chinese Long) v3cmocucB1017
CmoCh07G011140Watermelon (97103) v2cmowmbB850
CmoCh07G011140Watermelon (97103) v2cmowmbB853
CmoCh07G011140Watermelon (97103) v2cmowmbB866
CmoCh07G011140Wax gourdcmowgoB1039
CmoCh07G011140Wax gourdcmowgoB1052
CmoCh07G011140Wax gourdcmowgoB1072
CmoCh07G011140Cucurbita moschata (Rifu)cmocmoB228
CmoCh07G011140Cucurbita moschata (Rifu)cmocmoB458
CmoCh07G011140Cucurbita moschata (Rifu)cmocmoB460
CmoCh07G011140Cucurbita moschata (Rifu)cmocmoB479
CmoCh07G011140Cucurbita moschata (Rifu)cmocmoB483
CmoCh07G011140Cucumber (Gy14) v1cgycmoB0508
CmoCh07G011140Cucurbita maxima (Rimu)cmacmoB275
CmoCh07G011140Cucurbita maxima (Rimu)cmacmoB669
CmoCh07G011140Cucurbita maxima (Rimu)cmacmoB673
CmoCh07G011140Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G011140Cucurbita maxima (Rimu)cmacmoB836
CmoCh07G011140Wild cucumber (PI 183967)cmocpiB856
CmoCh07G011140Cucumber (Chinese Long) v2cmocuB843
CmoCh07G011140Cucumber (Chinese Long) v2cmocuB847
CmoCh07G011140Melon (DHL92) v3.5.1cmomeB776
CmoCh07G011140Watermelon (Charleston Gray)cmowcgB752
CmoCh07G011140Watermelon (Charleston Gray)cmowcgB768
CmoCh07G011140Watermelon (97103) v1cmowmB804
CmoCh07G011140Watermelon (97103) v1cmowmB823