CmoCh07G011030 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G011030
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionProtein root UVB sensitive 5
LocationCmo_Chr07 : 5768633 .. 5771363 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGAATCTCTCTGCCACAGTGCAATCGTTTGTTTGTAGTTTACGCCTACGGAGTTGAAGAAAGAAGCTCTATCACGTCGCTTGCCTTCTGAAAGCGCTTTCTCTCCGCATGTCTAGCGCTGTGCAGCTCTCATTTCCTACTTGTGCGTTTGAACCTTCGAGTTTGATTCACAGTGGAAGACTGCGAAGTCGTAGTCAGATTTTCTGTAACCAAACTGACTTTCGTGGTGGAGGAAACGATGAAAAGAACGGCGTTGATTGTGGCAGGTACGAGATTTTTCTTTTGCATTCTTCCGTTTTGTTATCTTGTAAACTGGTGGATTTCATGGATGAAAAAATGTGGAACATAGTTTTGTATTTGATCTATCTTTGCTTCCTGAAATGTCTTTACGTCTTGATCAATTTCCTTCTTTACTGAGCGGAAAATGTCCGAGATGATATGTCTTGCTATCTAAGTGGCGAAAGAAAATATCAATTTAGAGGAAGCGGTTTTTTGTTACTCTGACAGTGATAATGCTACCAGTAATATTCCATCTGATTGTATTATTTTTATTTTCATCTTGTTGCAGAGGACACAGCCAGCGGCGAGTAATCTTAGTCGAGAAATACGGAAACAGCGCTGTGAAGAAGTCGGTGATATTTGCCTTAGAATGCACTTTTTGTGTATCTGTTTATCTAATTCCTAAAAATATTTTTAGTAGAGATAATATATTCACATTCCTATTGCTATGGTTTTGTACTTCTGTTAATATCACTCTATTGAGGCAATCTATATGTTAGATTCATTTCATATGAATTAAAAACTACGCCATTAGCTTTCTGAGGATAGAGGTTCGAGTTTCTTTCAGGATAAAGCTGATAGTTGAGAGTTACTTACTGCCGGAAGAAGGAATAATAGAGATAATTAATGATCTTGTAAACGTAATCAGCATTGTTTATATACTTTGAGAACTGCATCGTTTTCTACTTCCAAGAGCTTCAACAAGATTTTCAATTCGGGAAATTTTGATTCCATGAACAGGTATTGTCTAGATGATAACCTACAGTTGCAAACTTTTCTTGACGAACAAACATCTTCGACATCCAAGGGGTTCGAAGGATCTCAATTTTCAGAAACAAAATTATCCTGGCTTCCAGATGTGATAAAAGATTTTATCTTACCTTCGGGATTCCCAGGTACCTATAATGCGTAGATTCTTTTCCTTTCTCACTTAATAATTTCTTCGTTCAACTTTTTTGTTAATTGATGTTTCCAAGCCAGAATATTTGGTTTCTACGTCGATTCATTCAATTAGATGTATTCCGTTTTTCTAATTGGGTTATTTTCTCTTTTAACCTTCTTTGTTTCTATATCACGTACATCAATCTAGCAAAGATTAGAATTATCAGTTTGCTCAATCCCTCTGGAGTCCGTGGATGAGATTGTTTGATGTTTGTGGAGCTAGGAATAGAGATGGTAGATCTATGATGGAGGAGGTGCTTCCAAATCAGCATTTTTGGGAGAAGGGTTAAGTGTTGTTCTTGAGTTTCTTTGTCATTTTGTGGTGCATTTGGCTTGAGAGGAACAAAATAATCTTTTGAGAGAAGGAGGTGTGGGAGTCGGCTAGATTTATTGCCTCCGTGTGAGTGTTGGTCGCTAGGCCGTTCTGTAATTATGAGATTGATCTTGTTTGTTTTTCCTTTTTTTTTTTGGATTGTAGTTTCTGTAGTTATGGTTTGGACTCCGATTTGGTTGGGGCTTGGTTTTTGTATATCCTTGTATTTTCATTCATTTCTCTCCATAAAAGTACGGTTTCTTACCTAATAAAGTAATAAAATAAGAACAATAAATTTTCCTCTTTATCCGTCTCTGGATTCCCACCAATTAGGAAAGGAACTCTAAACTCTCCATCTTTTGCATTAATCTAGATATTTTAAAATCTCTTCATTTCTGTACATATTATTCAAATCAAGGCTGCAACAATACCGACCCACTAGATTTTAGTCTTCCTAGTTACATCATGTGGCCGATGAACATTTGGGATGGGTAAATATCACTGACCTAAGAGACTATGAGCATATGATTAACAAATGTAATATCTCAAAAAAAAATTCCGGCAGTATTTCGTTATACCTGCTCTCTTACAATTATATTGTTTTCATTGCAGAATCAGTGTCTGACGATTACTTGCAGTACATAATACTGCAGTTCCCCACTAATGTTACTGGATGGATCTGCCATACGTTGGTCACATCCAGTCTACTAAAGGTAGATAATTAAGAAACTAGAATTCAACTTAATTGATAAATATTGCTAAAAGTACAGTTTCATTCTATTATAGTGGCTCTCTTAGCAAGAAGGAAAAGAAAAGGTCCTTAACAGTATTTATTCCACTCTTTTATTGACTATTTGCAGGCAGTTGGTATAGGCTCCTTCTCTGGAACTACTGCAGCTGCATCTGCTGCTGCCATCAGGTTTCTAAGTTTTCCCATAACATTTCTTTAGGCATCCTCCGTGAGCAATTTGTCTTTGAACTTTGTCTATGTAATAATGGACGCTTTGCACAATCTTTTGGCATGTATTGTACCCTATGTAATCATTGGTTTATTGTTTAAAAAAAAAATCAAACTATTGTATGCCACTATAGTCTTGTAATATGCTCTAATGTACGTTATTTTATTGACTACGCAGATGGGTCTCCAAGGATGGCATTGGAGCTGTTGGGCGCTTATTCATTGGTCTGGAATCATAA

mRNA sequence

CAGAATCTCTCTGCCACAGTGCAATCGTTTGTTTGTAGTTTACGCCTACGGAGTTGAAGAAAGAAGCTCTATCACGTCGCTTGCCTTCTGAAAGCGCTTTCTCTCCGCATGTCTAGCGCTGTGCAGCTCTCATTTCCTACTTGTGCGTTTGAACCTTCGAGTTTGATTCACAGTGGAAGACTGCGAAGTCGTAGTCAGATTTTCTGTAACCAAACTGACTTTCGTGGTGGAGGAAACGATGAAAAGAACGGCGTTGATTGTGGCAGAGGACACAGCCAGCGGCGAGTAATCTTAGTCGAGAAATACGGAAACAGCGCTGTGAAGAAGTCGTTGCAAACTTTTCTTGACGAACAAACATCTTCGACATCCAAGGGGTTCGAAGGATCTCAATTTTCAGAAACAAAATTATCCTGGCTTCCAGATGTGATAAAAGATTTTATCTTACCTTCGGGATTCCCAGAATCAGTGTCTGACGATTACTTGCAGTACATAATACTGCAGTTCCCCACTAATGTTACTGGATGGATCTGCCATACGTTGGTCACATCCAGTCTACTAAAGGCAGTTGGTATAGGCTCCTTCTCTGGAACTACTGCAGCTGCATCTGCTGCTGCCATCAGATGGGTCTCCAAGGATGGCATTGGAGCTGTTGGGCGCTTATTCATTGGTCTGGAATCATAA

Coding sequence (CDS)

ATGTCTAGCGCTGTGCAGCTCTCATTTCCTACTTGTGCGTTTGAACCTTCGAGTTTGATTCACAGTGGAAGACTGCGAAGTCGTAGTCAGATTTTCTGTAACCAAACTGACTTTCGTGGTGGAGGAAACGATGAAAAGAACGGCGTTGATTGTGGCAGAGGACACAGCCAGCGGCGAGTAATCTTAGTCGAGAAATACGGAAACAGCGCTGTGAAGAAGTCGTTGCAAACTTTTCTTGACGAACAAACATCTTCGACATCCAAGGGGTTCGAAGGATCTCAATTTTCAGAAACAAAATTATCCTGGCTTCCAGATGTGATAAAAGATTTTATCTTACCTTCGGGATTCCCAGAATCAGTGTCTGACGATTACTTGCAGTACATAATACTGCAGTTCCCCACTAATGTTACTGGATGGATCTGCCATACGTTGGTCACATCCAGTCTACTAAAGGCAGTTGGTATAGGCTCCTTCTCTGGAACTACTGCAGCTGCATCTGCTGCTGCCATCAGATGGGTCTCCAAGGATGGCATTGGAGCTGTTGGGCGCTTATTCATTGGTCTGGAATCATAA
Homology
[Close]
BLAST of CmoCh07G011030 vs. Swiss-Prot
Match: RUS5_ARATH (Protein root UVB sensitive 5 OS=Arabidopsis thaliana GN=RUS5 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-40
Identity = 90/156 (57.69%), Postives = 111/156 (71.15%), Query Frame = 1 

Query: 44  DEKNGVDCGRGHSQRRVILVEKYGNSAVKK--------SLQTFLDEQTSSTSKGFEGSQF 103
           D+++  D   G  +R  I+VE+YGN   K+         LQ  L+E+ +      + S  
Sbjct: 44  DDEDADDRRVGVERRISIVVERYGNGTSKRYFLDDDDSPLQGILEERETKPDNNSQSSNS 103

Query: 104 SETKLSWLPDVIKDFILPSGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGI 163
           SET + WLPDV++DF+ PSGFP SVSDDYL Y++ QFPTN+TGWIC+ LVTSSLLKAVG+
Sbjct: 104 SETNILWLPDVVRDFVFPSGFPGSVSDDYLDYMLWQFPTNITGWICNVLVTSSLLKAVGV 163

Query: 164 GSFSGT----TAAASAAAIRWVSKDGIGAVGRLFIG 188
           GSFSGT    TAAASAAAIRWVSKDGIGA+GRL IG
Sbjct: 164 GSFSGTSAAATAAASAAAIRWVSKDGIGALGRLLIG 199

[Close]
BLAST of CmoCh07G011030 vs. Swiss-Prot
Match: RUS1_ARATH (Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana GN=RUS1 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.3e-10
Identity = 42/117 (35.90%), Postives = 62/117 (52.99%), Query Frame = 1 

Query: 72  KKSLQTFLDEQTSSTSKGFE--GSQFSETKLSWLPDVIKDFILPSGFPESVSDDYLQYII 131
           K+ +  F+ ++  S    FE   S   E  L+   +++  F+LP GFP SV+ DYL Y +
Sbjct: 157 KRLVPDFVKDEFVSEESAFELSSSLTPENLLAQCRNLLTQFLLPEGFPNSVTSDYLDYSL 216

Query: 132 LQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAASAAAIRWVSKDGIGAVGRLFI 187
            +    +   I   L T SLL AVG+G      A  +AAAI WV KDGIG + ++ +
Sbjct: 217 WRGVQGIASQISGVLATQSLLYAVGLGK----GAIPTAAAINWVLKDGIGYLSKIML 269

[Close]
BLAST of CmoCh07G011030 vs. Swiss-Prot
Match: RUS1_DICDI (RUS1 family protein homolog OS=Dictyostelium discoideum GN=DDB_G0277179 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.9e-07
Identity = 33/92 (35.87%), Postives = 52/92 (56.52%), Query Frame = 1 

Query: 95  FSET--KLSWLPDVIKDFILPSGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKA 154
           F ET  K S   +V+ +  LP+G+P+SV+ DY  Y        +   I  TL T ++LK 
Sbjct: 45  FLETIEKNSGFYNVLCELFLPNGYPDSVTTDYFGYQFWDSIQALCSTITGTLATRAILKG 104

Query: 155 VGIGSFSGTTAAASAAAIRWVSKDGIGAVGRL 185
            G+G  S T A+A+    +W+ +DG+G +GR+
Sbjct: 105 YGVGDSSATVASATT---QWLIRDGMGMIGRI 133

[Close]
BLAST of CmoCh07G011030 vs. Swiss-Prot
Match: RUS1_RAT (RUS1 family protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.9e-06
Identity = 28/78 (35.90%), Postives = 45/78 (57.69%), Query Frame = 1 

Query: 107 IKDFILPSGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAAS 166
           ++  +LP GFP+SVS DYLQY +          +  +L T ++L+ +G+G+     A+ S
Sbjct: 71  LRSVLLPQGFPDSVSPDYLQYQLWDSVQAFASSLSGSLATQAVLQGLGVGN---AKASVS 130

Query: 167 AAAIRWVSKDGIGAVGRL 185
           AA   W+ KD  G +GR+
Sbjct: 131 AATSTWLVKDSTGMLGRI 145

[Close]
BLAST of CmoCh07G011030 vs. TrEMBL
Match: A0A0A0KXY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G309160 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.1e-76
Identity = 154/194 (79.38%), Postives = 165/194 (85.05%), Query Frame = 1 

Query: 1   MSSAVQLSFPTCAFEPSSLIHSGRLRSRSQIFCNQTDFRGGGNDEKNGVDCGRGHSQRRV 60
           MS AVQLS P+CAFE SSLIHSGRLR+R QIFCN+TD     +D+KNGVDC R   QRRV
Sbjct: 1   MSVAVQLSLPSCAFESSSLIHSGRLRNRRQIFCNRTDLPHREDDDKNGVDCSREQIQRRV 60

Query: 61  ILVEKYGNSAVKK-------SLQTFLDEQTSSTSKGFEGSQFSETKLSWLPDVIKDFILP 120
           ILVEKYGNSA+KK        LQ FLDEQTS TS GF+ S+FSETKLSWLP +IKDFILP
Sbjct: 61  ILVEKYGNSALKKYFLDDNQRLQFFLDEQTSPTSNGFKESRFSETKLSWLPGLIKDFILP 120

Query: 121 SGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAASAAAIRWV 180
           +GFPESVSDDYLQY+I QFPTNVTGWICHTLVTSSLLKAVGIGSFSGTT AASA AIRWV
Sbjct: 121 TGFPESVSDDYLQYMIRQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTTAASAVAIRWV 180

Query: 181 SKDGIGAVGRLFIG 188
           SKDGIGAVGRLFIG
Sbjct: 181 SKDGIGAVGRLFIG 194

[Close]
BLAST of CmoCh07G011030 vs. TrEMBL
Match: A0A067E9Z3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010911mg PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 7.3e-49
Identity = 113/194 (58.25%), Postives = 138/194 (71.13%), Query Frame = 1 

Query: 1   MSSAVQLSFPTCAFEPSSLIHSGRLRSRSQIFCNQTDFRGGGNDEKNGVDCGRGHSQRRV 60
           MS A+QLS PT A E S      R R   QI C  T  +   ++E++    GR  SQ+ V
Sbjct: 1   MSCALQLSVPTRAIESSRKKAGNRARCL-QIRCAFT--QSNLSEEEDEAGNGRAQSQQHV 60

Query: 61  ILVEKYGNSAVKK-------SLQTFLDEQTSSTSKGFEGSQFSETKLSWLPDVIKDFILP 120
           +LVE+YGN   ++        +QTF  +   +     +GSQFS+T LSWLP+V+KDF+LP
Sbjct: 61  VLVERYGNGTARRFILDDEWQVQTFDADHDPTKDTRLQGSQFSDTNLSWLPNVVKDFLLP 120

Query: 121 SGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAASAAAIRWV 180
           +GFP SVSDDYL Y++LQFPTNVTGWICH +VTSSLLKAVGI SFSGTTAAASAAAI+W+
Sbjct: 121 AGFPGSVSDDYLGYMLLQFPTNVTGWICHAIVTSSLLKAVGIDSFSGTTAAASAAAIKWI 180

Query: 181 SKDGIGAVGRLFIG 188
           SKDGIGAVGRLFIG
Sbjct: 181 SKDGIGAVGRLFIG 191

[Close]
BLAST of CmoCh07G011030 vs. TrEMBL
Match: K7L1U9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G149300 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.8e-48
Identity = 114/196 (58.16%), Postives = 134/196 (68.37%), Query Frame = 1 

Query: 1   MSSAVQLSFPTCAFEPSSLIHS-GRLRSRS-QIFCNQTDFRGGGNDEKNGVDCGRGHSQR 60
           MS  +Q SF + AF  S  +    R+R R  Q  C+          +++G D G G    
Sbjct: 1   MSHTLQFSFVSSAFNYSMKMEKMKRVRPRGFQFLCSSEH---SSFKDEDGADNGGGQVSS 60

Query: 61  RVILVEKYGNSAVKK-------SLQTFLDEQTSSTSKGFEGSQFSETKLSWLPDVIKDFI 120
           RVILVE+Y N   K+        LQ FL E+  ST   F+    S+  LSWLP++IKDF+
Sbjct: 61  RVILVERYSNGTAKRYVLGDDSQLQAFLVEEDRSTPNRFQDLHSSDESLSWLPEIIKDFV 120

Query: 121 LPSGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAASAAAIR 180
           LP+GFP SVSDDYL Y++LQFPTNVTGWICHTLVTSSLLKAVGIGSF+GTTAAASAAAIR
Sbjct: 121 LPAGFPGSVSDDYLDYMLLQFPTNVTGWICHTLVTSSLLKAVGIGSFTGTTAAASAAAIR 180

Query: 181 WVSKDGIGAVGRLFIG 188
           WVSKDGIGAVGRLFIG
Sbjct: 181 WVSKDGIGAVGRLFIG 193

[Close]
BLAST of CmoCh07G011030 vs. TrEMBL
Match: V7B445_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G104800g PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.6e-48
Identity = 112/195 (57.44%), Postives = 136/195 (69.74%), Query Frame = 1 

Query: 1   MSSAVQLSFPTCAFEPSSLIHSGRLRSRSQIFCNQTDFRGGGNDEKNGVDCGRGHSQRRV 60
           MS  +Q SF + AF  S  +   +++ R +  C +       +  ++  D G G    RV
Sbjct: 1   MSHTLQFSFSSSAFNSSMKVEKMKIK-RLKTRCFRVVCSSERSSFEDDADNGGGQVLSRV 60

Query: 61  ILVEKYGNSAVKK-------SLQTFL-DEQTSSTSKGFEGSQFSETKLSWLPDVIKDFIL 120
           ILVE+Y N   K+        LQTFL +E++S+T   F+ S   + +LSWLPD IKDFIL
Sbjct: 61  ILVERYSNGTAKRYVLGDDSKLQTFLVEEESSTTPNRFQDSHSPDERLSWLPDTIKDFIL 120

Query: 121 PSGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAASAAAIRW 180
           PSGFP SVSDDYL Y++LQFPTNVTGWICHTLVTSSLLKAVG+GSFSG+TAAASAAAIRW
Sbjct: 121 PSGFPGSVSDDYLHYMLLQFPTNVTGWICHTLVTSSLLKAVGVGSFSGSTAAASAAAIRW 180

Query: 181 VSKDGIGAVGRLFIG 188
           VSKDGIGA GRLFIG
Sbjct: 181 VSKDGIGATGRLFIG 194

[Close]
BLAST of CmoCh07G011030 vs. TrEMBL
Match: A0A067JNR6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25022 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.5e-46
Identity = 109/194 (56.19%), Postives = 134/194 (69.07%), Query Frame = 1 

Query: 1   MSSAVQLSFPTCAFEPSSLIHSGRLRSRSQIFCNQTDFRGGGNDEKNGVDCGRGHSQRRV 60
           M+ ++Q SF   A EP     + R     QI C   + R    ++ +     RGH +  V
Sbjct: 1   MAYSLQFSFAAPALEPYIRTKARRF----QILCCSVESRVQKGEDDDEASNWRGHCKSNV 60

Query: 61  ILVEKYGNSAVKK-------SLQTFLDEQTSSTSKGFEGSQFSETKLSWLPDVIKDFILP 120
           ILVE+Y N   ++        L++FL+E  +  S+  E S  S TKL WLP ++KDFILP
Sbjct: 61  ILVERYSNGTARRYMLDDDLQLKSFLEEHGAKNSRSQE-SHSSGTKLLWLPYIVKDFILP 120

Query: 121 SGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAASAAAIRWV 180
           +GFP SVSDDYLQY++LQFPTNVTGWICHTLVTSSLLKAVG+GSF+GTTAAASAAAIRWV
Sbjct: 121 AGFPGSVSDDYLQYMLLQFPTNVTGWICHTLVTSSLLKAVGVGSFTGTTAAASAAAIRWV 180

Query: 181 SKDGIGAVGRLFIG 188
           SKDGIGA+GRLFIG
Sbjct: 181 SKDGIGALGRLFIG 189

[Close]
BLAST of CmoCh07G011030 vs. TAIR10
Match: AT5G01510.1 (AT5G01510.1 Protein of unknown function, DUF647)

HSP 1 Score: 167.9 bits (424), Expect = 5.9e-42
Identity = 90/156 (57.69%), Postives = 111/156 (71.15%), Query Frame = 1 

Query: 44  DEKNGVDCGRGHSQRRVILVEKYGNSAVKK--------SLQTFLDEQTSSTSKGFEGSQF 103
           D+++  D   G  +R  I+VE+YGN   K+         LQ  L+E+ +      + S  
Sbjct: 44  DDEDADDRRVGVERRISIVVERYGNGTSKRYFLDDDDSPLQGILEERETKPDNNSQSSNS 103

Query: 104 SETKLSWLPDVIKDFILPSGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGI 163
           SET + WLPDV++DF+ PSGFP SVSDDYL Y++ QFPTN+TGWIC+ LVTSSLLKAVG+
Sbjct: 104 SETNILWLPDVVRDFVFPSGFPGSVSDDYLDYMLWQFPTNITGWICNVLVTSSLLKAVGV 163

Query: 164 GSFSGT----TAAASAAAIRWVSKDGIGAVGRLFIG 188
           GSFSGT    TAAASAAAIRWVSKDGIGA+GRL IG
Sbjct: 164 GSFSGTSAAATAAASAAAIRWVSKDGIGALGRLLIG 199

[Close]
BLAST of CmoCh07G011030 vs. TAIR10
Match: AT3G45890.1 (AT3G45890.1 Protein of unknown function, DUF647)

HSP 1 Score: 65.5 bits (158), Expect = 4.1e-11
Identity = 42/117 (35.90%), Postives = 62/117 (52.99%), Query Frame = 1 

Query: 72  KKSLQTFLDEQTSSTSKGFE--GSQFSETKLSWLPDVIKDFILPSGFPESVSDDYLQYII 131
           K+ +  F+ ++  S    FE   S   E  L+   +++  F+LP GFP SV+ DYL Y +
Sbjct: 157 KRLVPDFVKDEFVSEESAFELSSSLTPENLLAQCRNLLTQFLLPEGFPNSVTSDYLDYSL 216

Query: 132 LQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAASAAAIRWVSKDGIGAVGRLFI 187
            +    +   I   L T SLL AVG+G      A  +AAAI WV KDGIG + ++ +
Sbjct: 217 WRGVQGIASQISGVLATQSLLYAVGLGK----GAIPTAAAINWVLKDGIGYLSKIML 269

[Close]
BLAST of CmoCh07G011030 vs. TAIR10
Match: AT5G49820.1 (AT5G49820.1 Protein of unknown function, DUF647)

HSP 1 Score: 51.6 bits (122), Expect = 6.2e-07
Identity = 34/130 (26.15%), Postives = 62/130 (47.69%), Query Frame = 1 

Query: 55  HSQRRVILVEKYGNSAVKKSLQTFLDEQTSSTSKGFEGSQFSETKLSWLPDVIKDFILPS 114
           HS  R+I  E+      K   ++    +    S      +  +T    +   ++ +++P 
Sbjct: 56  HSTLRLICCEEIDGRRFKYVAESDGSGRFKKNSVRAISLESPQTPFDEVGSFLRSYVVPE 115

Query: 115 GFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAASAAAIRWVS 174
           GFP SV++ Y+ Y+  +   +  G       T +LL +VG    S  ++A++A AI W+ 
Sbjct: 116 GFPGSVNESYVPYMTWRALKHFFGGAMGVFTTQTLLNSVGA---SRNSSASAAVAINWIL 175

Query: 175 KDGIGAVGRL 185
           KDG G VG++
Sbjct: 176 KDGAGRVGKM 182

[Close]
BLAST of CmoCh07G011030 vs. TAIR10
Match: AT2G23470.1 (AT2G23470.1 Protein of unknown function, DUF647)

HSP 1 Score: 48.5 bits (114), Expect = 5.2e-06
Identity = 28/76 (36.84%), Postives = 43/76 (56.58%), Query Frame = 1 

Query: 108 KDFILPSGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAASA 167
           KDF LP    + VSD+Y+ Y+  +F   V       L T ++ +A+GIG    + + AS+
Sbjct: 120 KDFFLP----KQVSDNYISYVKWKFLHRVFSSALQVLATQAMFRAIGIGQ---SRSLASS 179

Query: 168 AAIRWVSKDGIGAVGR 184
           AA  W+ KDG+G + R
Sbjct: 180 AAFNWILKDGLGRLSR 188

[Close]
BLAST of CmoCh07G011030 vs. NCBI nr
Match: gi|449461779|ref|XP_004148619.1| (PREDICTED: protein root UVB sensitive 5 isoform X3 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 4.5e-76
Identity = 154/194 (79.38%), Postives = 165/194 (85.05%), Query Frame = 1 

Query: 1   MSSAVQLSFPTCAFEPSSLIHSGRLRSRSQIFCNQTDFRGGGNDEKNGVDCGRGHSQRRV 60
           MS AVQLS P+CAFE SSLIHSGRLR+R QIFCN+TD     +D+KNGVDC R   QRRV
Sbjct: 1   MSVAVQLSLPSCAFESSSLIHSGRLRNRRQIFCNRTDLPHREDDDKNGVDCSREQIQRRV 60

Query: 61  ILVEKYGNSAVKK-------SLQTFLDEQTSSTSKGFEGSQFSETKLSWLPDVIKDFILP 120
           ILVEKYGNSA+KK        LQ FLDEQTS TS GF+ S+FSETKLSWLP +IKDFILP
Sbjct: 61  ILVEKYGNSALKKYFLDDNQRLQFFLDEQTSPTSNGFKESRFSETKLSWLPGLIKDFILP 120

Query: 121 SGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAASAAAIRWV 180
           +GFPESVSDDYLQY+I QFPTNVTGWICHTLVTSSLLKAVGIGSFSGTT AASA AIRWV
Sbjct: 121 TGFPESVSDDYLQYMIRQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTTAASAVAIRWV 180

Query: 181 SKDGIGAVGRLFIG 188
           SKDGIGAVGRLFIG
Sbjct: 181 SKDGIGAVGRLFIG 194

[Close]
BLAST of CmoCh07G011030 vs. NCBI nr
Match: gi|778693775|ref|XP_011653689.1| (PREDICTED: protein root UVB sensitive 5 isoform X2 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 4.5e-76
Identity = 154/194 (79.38%), Postives = 165/194 (85.05%), Query Frame = 1 

Query: 1   MSSAVQLSFPTCAFEPSSLIHSGRLRSRSQIFCNQTDFRGGGNDEKNGVDCGRGHSQRRV 60
           MS AVQLS P+CAFE SSLIHSGRLR+R QIFCN+TD     +D+KNGVDC R   QRRV
Sbjct: 1   MSVAVQLSLPSCAFESSSLIHSGRLRNRRQIFCNRTDLPHREDDDKNGVDCSREQIQRRV 60

Query: 61  ILVEKYGNSAVKK-------SLQTFLDEQTSSTSKGFEGSQFSETKLSWLPDVIKDFILP 120
           ILVEKYGNSA+KK        LQ FLDEQTS TS GF+ S+FSETKLSWLP +IKDFILP
Sbjct: 61  ILVEKYGNSALKKYFLDDNQRLQFFLDEQTSPTSNGFKESRFSETKLSWLPGLIKDFILP 120

Query: 121 SGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAASAAAIRWV 180
           +GFPESVSDDYLQY+I QFPTNVTGWICHTLVTSSLLKAVGIGSFSGTT AASA AIRWV
Sbjct: 121 TGFPESVSDDYLQYMIRQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTTAASAVAIRWV 180

Query: 181 SKDGIGAVGRLFIG 188
           SKDGIGAVGRLFIG
Sbjct: 181 SKDGIGAVGRLFIG 194

[Close]
BLAST of CmoCh07G011030 vs. NCBI nr
Match: gi|778693772|ref|XP_011653688.1| (PREDICTED: protein root UVB sensitive 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 4.5e-76
Identity = 154/194 (79.38%), Postives = 165/194 (85.05%), Query Frame = 1 

Query: 1   MSSAVQLSFPTCAFEPSSLIHSGRLRSRSQIFCNQTDFRGGGNDEKNGVDCGRGHSQRRV 60
           MS AVQLS P+CAFE SSLIHSGRLR+R QIFCN+TD     +D+KNGVDC R   QRRV
Sbjct: 1   MSVAVQLSLPSCAFESSSLIHSGRLRNRRQIFCNRTDLPHREDDDKNGVDCSREQIQRRV 60

Query: 61  ILVEKYGNSAVKK-------SLQTFLDEQTSSTSKGFEGSQFSETKLSWLPDVIKDFILP 120
           ILVEKYGNSA+KK        LQ FLDEQTS TS GF+ S+FSETKLSWLP +IKDFILP
Sbjct: 61  ILVEKYGNSALKKYFLDDNQRLQFFLDEQTSPTSNGFKESRFSETKLSWLPGLIKDFILP 120

Query: 121 SGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAASAAAIRWV 180
           +GFPESVSDDYLQY+I QFPTNVTGWICHTLVTSSLLKAVGIGSFSGTT AASA AIRWV
Sbjct: 121 TGFPESVSDDYLQYMIRQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTTAASAVAIRWV 180

Query: 181 SKDGIGAVGRLFIG 188
           SKDGIGAVGRLFIG
Sbjct: 181 SKDGIGAVGRLFIG 194

[Close]
BLAST of CmoCh07G011030 vs. NCBI nr
Match: gi|659069457|ref|XP_008449934.1| (PREDICTED: uncharacterized protein LOC103491657 isoform X2 [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74
Identity = 150/194 (77.32%), Postives = 165/194 (85.05%), Query Frame = 1 

Query: 1   MSSAVQLSFPTCAFEPSSLIHSGRLRSRSQIFCNQTDFRGGGNDEKNGVDCGRGHSQRRV 60
           MS AV+LS P+CAFE S LIHSGRLR+R QIFCN+ D   G +D+ NG+DC R   QRRV
Sbjct: 1   MSVAVKLSLPSCAFESSRLIHSGRLRNRPQIFCNRADLPHGEDDDSNGLDCSREQIQRRV 60

Query: 61  ILVEKYGNSAVKK-------SLQTFLDEQTSSTSKGFEGSQFSETKLSWLPDVIKDFILP 120
           ILVEKYGNSA+KK        LQ+FLDEQT  TS GF+ S+FSETKLSWLP +IKDFILP
Sbjct: 61  ILVEKYGNSALKKYFLDDSQRLQSFLDEQTYPTSNGFKESRFSETKLSWLPGLIKDFILP 120

Query: 121 SGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAASAAAIRWV 180
           +GFPESVSDDYLQY+I QFPTNVTGWICHTLVTSSLLKAVGIGSFSG+TAAASAAAIRWV
Sbjct: 121 TGFPESVSDDYLQYMIRQFPTNVTGWICHTLVTSSLLKAVGIGSFSGSTAAASAAAIRWV 180

Query: 181 SKDGIGAVGRLFIG 188
           SKDGIGAVGRLFIG
Sbjct: 181 SKDGIGAVGRLFIG 194

[Close]
BLAST of CmoCh07G011030 vs. NCBI nr
Match: gi|659069455|ref|XP_008449930.1| (PREDICTED: UPF0420 protein C16orf58 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74
Identity = 150/194 (77.32%), Postives = 165/194 (85.05%), Query Frame = 1 

Query: 1   MSSAVQLSFPTCAFEPSSLIHSGRLRSRSQIFCNQTDFRGGGNDEKNGVDCGRGHSQRRV 60
           MS AV+LS P+CAFE S LIHSGRLR+R QIFCN+ D   G +D+ NG+DC R   QRRV
Sbjct: 1   MSVAVKLSLPSCAFESSRLIHSGRLRNRPQIFCNRADLPHGEDDDSNGLDCSREQIQRRV 60

Query: 61  ILVEKYGNSAVKK-------SLQTFLDEQTSSTSKGFEGSQFSETKLSWLPDVIKDFILP 120
           ILVEKYGNSA+KK        LQ+FLDEQT  TS GF+ S+FSETKLSWLP +IKDFILP
Sbjct: 61  ILVEKYGNSALKKYFLDDSQRLQSFLDEQTYPTSNGFKESRFSETKLSWLPGLIKDFILP 120

Query: 121 SGFPESVSDDYLQYIILQFPTNVTGWICHTLVTSSLLKAVGIGSFSGTTAAASAAAIRWV 180
           +GFPESVSDDYLQY+I QFPTNVTGWICHTLVTSSLLKAVGIGSFSG+TAAASAAAIRWV
Sbjct: 121 TGFPESVSDDYLQYMIRQFPTNVTGWICHTLVTSSLLKAVGIGSFSGSTAAASAAAIRWV 180

Query: 181 SKDGIGAVGRLFIG 188
           SKDGIGAVGRLFIG
Sbjct: 181 SKDGIGAVGRLFIG 194

The following BLAST results are available for this feature:
BLAST of CmoCh07G011030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RUS5_ARATH1.0e-4057.69Protein root UVB sensitive 5 OS=Arabidopsis thaliana GN=RUS5 PE=2 SV=1[more]
RUS1_ARATH7.3e-1035.90Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana GN=RUS1 PE=1... [more]
RUS1_DICDI9.9e-0735.87RUS1 family protein homolog OS=Dictyostelium discoideum GN=DDB_G0277179 PE=3 SV=... [more]
RUS1_RAT4.9e-0635.90RUS1 family protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1[more]
BLAST of CmoCh07G011030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXY9_CUCSA3.1e-7679.38Uncharacterized protein OS=Cucumis sativus GN=Csa_4G309160 PE=4 SV=1[more]
A0A067E9Z3_CITSI7.3e-4958.25Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010911mg PE=4 SV=1[more]
K7L1U9_SOYBN2.8e-4858.16Uncharacterized protein OS=Glycine max GN=GLYMA_07G149300 PE=4 SV=1[more]
V7B445_PHAVU3.6e-4857.44Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G104800g PE=4 SV=1[more]
A0A067JNR6_JATCU1.5e-4656.19Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25022 PE=4 SV=1[more]
BLAST of CmoCh07G011030 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G01510.15.9e-4257.69 Protein of unknown function, DUF647[more]
AT3G45890.14.1e-1135.90 Protein of unknown function, DUF647[more]
AT5G49820.16.2e-0726.15 Protein of unknown function, DUF647[more]
AT2G23470.15.2e-0636.84 Protein of unknown function, DUF647[more]
BLAST of CmoCh07G011030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461779|ref|XP_004148619.1|4.5e-7679.38PREDICTED: protein root UVB sensitive 5 isoform X3 [Cucumis sativus][more]
gi|778693775|ref|XP_011653689.1|4.5e-7679.38PREDICTED: protein root UVB sensitive 5 isoform X2 [Cucumis sativus][more]
gi|778693772|ref|XP_011653688.1|4.5e-7679.38PREDICTED: protein root UVB sensitive 5 isoform X1 [Cucumis sativus][more]
gi|659069457|ref|XP_008449934.1|1.5e-7477.32PREDICTED: uncharacterized protein LOC103491657 isoform X2 [Cucumis melo][more]
gi|659069455|ref|XP_008449930.1|1.5e-7477.32PREDICTED: UPF0420 protein C16orf58 homolog isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006968RUS_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G011030.1CmoCh07G011030.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006968Root UVB sensitive familyPANTHERPTHR12770FAMILY NOT NAMEDcoord: 53..187
score: 4.0
IPR006968Root UVB sensitive familyPFAMPF04884DUF647coord: 101..186
score: 2.7
NoneNo IPR availablePANTHERPTHR12770:SF24SUBFAMILY NOT NAMEDcoord: 53..187
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G011030CmaCh03G003500Cucurbita maxima (Rimu)cmacmoB673
CmoCh07G011030CsGy4G015180Cucumber (Gy14) v2cgybcmoB537
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G011030Silver-seed gourdcarcmoB0228
CmoCh07G011030Silver-seed gourdcarcmoB0757
CmoCh07G011030Silver-seed gourdcarcmoB0795
CmoCh07G011030Silver-seed gourdcarcmoB1344
CmoCh07G011030Cucumber (Chinese Long) v3cmocucB0997
CmoCh07G011030Cucumber (Chinese Long) v3cmocucB0999
CmoCh07G011030Cucumber (Chinese Long) v3cmocucB1010
CmoCh07G011030Cucumber (Chinese Long) v3cmocucB1017
CmoCh07G011030Watermelon (97103) v2cmowmbB867
CmoCh07G011030Watermelon (97103) v2cmowmbB850
CmoCh07G011030Watermelon (97103) v2cmowmbB853
CmoCh07G011030Watermelon (97103) v2cmowmbB866
CmoCh07G011030Wax gourdcmowgoB1040
CmoCh07G011030Wax gourdcmowgoB1039
CmoCh07G011030Wax gourdcmowgoB1046
CmoCh07G011030Wax gourdcmowgoB1052
CmoCh07G011030Cucurbita moschata (Rifu)cmocmoB228
CmoCh07G011030Cucurbita moschata (Rifu)cmocmoB458
CmoCh07G011030Cucurbita moschata (Rifu)cmocmoB460
CmoCh07G011030Cucurbita moschata (Rifu)cmocmoB479
CmoCh07G011030Cucurbita moschata (Rifu)cmocmoB483
CmoCh07G011030Cucumber (Gy14) v1cgycmoB0102
CmoCh07G011030Cucumber (Gy14) v1cgycmoB0508
CmoCh07G011030Cucurbita maxima (Rimu)cmacmoB275
CmoCh07G011030Cucurbita maxima (Rimu)cmacmoB669
CmoCh07G011030Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G011030Cucurbita maxima (Rimu)cmacmoB836
CmoCh07G011030Wild cucumber (PI 183967)cmocpiB856
CmoCh07G011030Cucumber (Chinese Long) v2cmocuB843
CmoCh07G011030Cucumber (Chinese Long) v2cmocuB847
CmoCh07G011030Melon (DHL92) v3.5.1cmomeB776
CmoCh07G011030Melon (DHL92) v3.5.1cmomeB798
CmoCh07G011030Watermelon (Charleston Gray)cmowcgB752
CmoCh07G011030Watermelon (Charleston Gray)cmowcgB768
CmoCh07G011030Watermelon (Charleston Gray)cmowcgB769
CmoCh07G011030Watermelon (97103) v1cmowmB804
CmoCh07G011030Watermelon (97103) v1cmowmB825
CmoCh07G011030Watermelon (97103) v1cmowmB823
CmoCh07G011030Cucurbita pepo (Zucchini)cmocpeB821
CmoCh07G011030Cucurbita pepo (Zucchini)cmocpeB802
CmoCh07G011030Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G011030Cucurbita pepo (Zucchini)cmocpeB832
CmoCh07G011030Bottle gourd (USVL1VR-Ls)cmolsiB774
CmoCh07G011030Bottle gourd (USVL1VR-Ls)cmolsiB787
CmoCh07G011030Bottle gourd (USVL1VR-Ls)cmolsiB788
CmoCh07G011030Cucumber (Gy14) v2cgybcmoB418
CmoCh07G011030Cucumber (Gy14) v2cgybcmoB842
CmoCh07G011030Melon (DHL92) v3.6.1cmomedB881
CmoCh07G011030Melon (DHL92) v3.6.1cmomedB901