CmoCh07G009640 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCACAGTCAGTAAAGATTTATGATACATGTATAGGGTGTACTCAATGTGTCCGAGCTTGCCCCACATTAGAAATGAGACCTTGGGGCAGATGTAAAGCTAAGCAAATAGCTTCGGCTCCACCAAGAAGATCAGACTGTCTTGGTTGTAAGAGATGTGAATCCGGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCCGGAATAGGTTCAAGAATAGTGAAACCCGAGTAAGAAAGGTTCAGTAGTTCATTCATTTCTTACACTGCCCGTAAAGTTCAGGGAATAGCGGGGCAGGTTCAGTTCTACAACTCTCTTCGTGACGCACCATATCAATTAAACTTGGCAAGTTTGTCTTGCTTGCCATCGTCCCCGTTTTGGCGTGAGTTTCTTCTGGGTCAGGAAGTCACTCCTCGCCCCATTATCCGTCTTGACCAGAGCGACCCGCCTCCACGTTCTCTTCTAGTGCACTATTGCTGTCATCTCCTTCTCTTGGACCGGAGACACTTACCAGAGGCTAGTGAACAAGCTGCGGATCGGTAA ATGTCACAGTCAGTAAAGATTTATGATACATGTATAGGGTGTACTCAATGTGTCCGAGCTTGCCCCACATTAGAAATGAGACCTTGGGGCAGATGTAAAGCTAAGCAAATAGCTTCGGCTCCACCAAGAAGATCAGACTGTCTTGGTTGTAAGAGATGTGAATCCGGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGTTCAGGGAATAGCGGGGCAGGTTCAGTTCTACAACTCTCTTCGTGACGCACCATATCAATTAAACTTGGCAAGTTTGTCTTGCTTGCCATCGTCCCCGTTTTGGCGTGAGTTTCTTCTGGGTCAGGAAGTCACTCCTCGCCCCATTATCCGTCTTGACCAGAGCGACCCGCCTCCACGTTCTCTTCTAGTGCACTATTGCTGTCATCTCCTTCTCTTGGACCGGAGACACTTACCAGAGGCTAGTGAACAAGCTGCGGATCGGTAA ATGTCACAGTCAGTAAAGATTTATGATACATGTATAGGGTGTACTCAATGTGTCCGAGCTTGCCCCACATTAGAAATGAGACCTTGGGGCAGATGTAAAGCTAAGCAAATAGCTTCGGCTCCACCAAGAAGATCAGACTGTCTTGGTTGTAAGAGATGTGAATCCGGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGTTCAGGGAATAGCGGGGCAGGTTCAGTTCTACAACTCTCTTCGTGACGCACCATATCAATTAAACTTGGCAAGTTTGTCTTGCTTGCCATCGTCCCCGTTTTGGCGTGAGTTTCTTCTGGGTCAGGAAGTCACTCCTCGCCCCATTATCCGTCTTGACCAGAGCGACCCGCCTCCACGTTCTCTTCTAGTGCACTATTGCTGTCATCTCCTTCTCTTGGACCGGAGACACTTACCAGAGGCTAGTGAACAAGCTGCGGATCGGTAA
BLAST of CmoCh07G009640 vs. Swiss-Prot
Match: PSAC_CUCSA (Photosystem I iron-sulfur center OS=Cucumis sativus GN=psaC PE=1 SV=3) HSP 1 Score: 99.0 bits (245), Expect = 4.9e-20 Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 1
BLAST of CmoCh07G009640 vs. Swiss-Prot
Match: PSAC_PHAVU (Photosystem I iron-sulfur center OS=Phaseolus vulgaris GN=psaC PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.9e-20 Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 1
BLAST of CmoCh07G009640 vs. Swiss-Prot
Match: PSAC_PEA (Photosystem I iron-sulfur center OS=Pisum sativum GN=psaC PE=1 SV=3) HSP 1 Score: 99.0 bits (245), Expect = 4.9e-20 Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 1
BLAST of CmoCh07G009640 vs. Swiss-Prot
Match: PSAC_CUSRE (Photosystem I iron-sulfur center OS=Cuscuta reflexa GN=psaC PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.9e-20 Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 1
BLAST of CmoCh07G009640 vs. Swiss-Prot
Match: PSAC_NEPOL (Photosystem I iron-sulfur center OS=Nephroselmis olivacea GN=psaC PE=3 SV=3) HSP 1 Score: 96.7 bits (239), Expect = 2.4e-19 Identity = 47/57 (82.46%), Postives = 48/57 (84.21%), Query Frame = 1
BLAST of CmoCh07G009640 vs. TrEMBL
Match: A0A0S2IE23_9ROSI (Photosystem I iron-sulfur center OS=Cucurbita argyrosperma subsp. sororia GN=psaC PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.4e-18 Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 1
BLAST of CmoCh07G009640 vs. TrEMBL
Match: A0A0S2IFF4_9ROSI (Photosystem I iron-sulfur center OS=Cucurbita andreana GN=psaC PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.4e-18 Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 1
BLAST of CmoCh07G009640 vs. TrEMBL
Match: A0A0S2IFZ1_9ROSI (Photosystem I iron-sulfur center OS=Cucurbita okeechobeensis subsp. martinezii GN=psaC PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.4e-18 Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 1
BLAST of CmoCh07G009640 vs. TrEMBL
Match: A0A0F6NKH5_LATOD (Photosystem I iron-sulfur center OS=Lathyrus odoratus GN=psaC PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.4e-18 Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 1
BLAST of CmoCh07G009640 vs. TrEMBL
Match: A0A0S2IH38_CUCPE (Photosystem I iron-sulfur center OS=Cucurbita pepo subsp. pepo GN=psaC PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.4e-18 Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 1
BLAST of CmoCh07G009640 vs. TAIR10
Match: ATCG01060.1 (ATCG01060.1 iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding) HSP 1 Score: 96.3 bits (238), Expect = 1.8e-20 Identity = 47/57 (82.46%), Postives = 48/57 (84.21%), Query Frame = 1
BLAST of CmoCh07G009640 vs. NCBI nr
Match: gi|156618870|ref|YP_001430151.1| (photosystem I subunit VII (chloroplast) [Cuscuta reflexa]) HSP 1 Score: 99.0 bits (245), Expect = 7.8e-18 Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 1
BLAST of CmoCh07G009640 vs. NCBI nr
Match: gi|68164855|ref|YP_247651.1| (photosystem I subunit VII [Cucumis sativus]) HSP 1 Score: 99.0 bits (245), Expect = 7.8e-18 Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 1
BLAST of CmoCh07G009640 vs. NCBI nr
Match: gi|827045131|ref|YP_009141471.1| (photosystem I subunit VII (chloroplast) [Lathyrus tingitanus]) HSP 1 Score: 99.0 bits (245), Expect = 7.8e-18 Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 1
BLAST of CmoCh07G009640 vs. NCBI nr
Match: gi|372484553|gb|AEX95917.1| (photosystem I subunit VII (chloroplast) [Camassia scilloides]) HSP 1 Score: 99.0 bits (245), Expect = 7.8e-18 Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 1
BLAST of CmoCh07G009640 vs. NCBI nr
Match: gi|821317353|ref|YP_009138437.1| (photosystem I subunit VII (chloroplast) [Lathyrus davidii]) HSP 1 Score: 97.8 bits (242), Expect = 1.7e-17 Identity = 47/57 (82.46%), Postives = 49/57 (85.96%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |