CmoCh07G008420 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G008420
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description50S ribosomal protein L21
LocationCmo_Chr07 : 3957706 .. 3962463 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAGTATTTTTTTTAAAAAAAATTAATAATATGTGTAATGATGTGGAGGGGAGGACGAAGACAAGAGCATTAAATAATTTGCGTAATGGATCTTCCCAGGTGCTATGTCCACGTGAAGCTAAGTCGTCAGCCTAGGAAAAGTTTGGTGTGACAATTACACATCTGCCCCCACTTAGATTTATTGACTAATTTAGAACCCAATAATTAATTTTTATTTATTTATTTATTTATTGAGATGGTAAATACAATACAAGTGCCTTTCAATAATTTATTAGCCTTGGGTTGGGGTGGGGTTTTGTGGAACATAAGAAAGGGAACATTATTTCAACCCAACATTTAATAATATATCAATAAATTGTTTCTTTGTCTTCACTTTATTTATTATTATTTCTTTTTTATTCTGAACCATGTTCAAATTGACATAAAATAATTAAATAATAATCTATTTAAATGTAAGATTAATTTTAATATAATTATTATTATTATTTTTTTTAAATTTGACTAATAATTCAAAAAATATATGATTTGATATACATGAACCCAATATGGGCTTAAACGTTGGGCTTTTAAACTGGGCTCAAAGCCTCTATTTGGGCTTTTTAAATGGGCTTAAAGCCTTTATCGTTATTAATGGATAGCCCATGGATCCAGACCATCTTGAACCTTTCCTAACACCAGCTTGTGAGCCAAGTACAACCTAACATGAGTATAATACAATATTTAATTTTATTAGTTTTTTTTTTAATTTAAAAATCTAAATTGGAAATTTCCACTCCAATCTCCACAAAAATTAAATAGAAACTAAACAAGAACTCGAGACGTAACTTTTAAATTTTATATTTAATATATTTTAATTTTTAATTTAGTATCTAATAAATTTAAAAGTTTATACATAAAATTAAAATTTATGATTTAAAGAACTTTTAGGACGGTGGTAACAATTTATCAACATTTTTTATCATTAAAAATTTATTAGACGTGGTTAAATTATAAATTTAATTTTTTTTTTTTAGTTTTATATTTAATAAATTTTAGAATTTTAAATGTTTAATAAATTTATAAAATTTAAAATAATAATAATAAAAAAAAAGCTCTACAAAATAACTCAATTAAAAGGTCAGTAAATTTATAATTTTAAGAATTTTTGAAAGTAAGACCGTCGTTGAATCCAAAAACCCTCACTCACAGGTCCCAAAACCCTCACCTCCAGCTATCGTCTCCACCACCGACGGCCATAATGTTGCACCTGTGGGCTTCCTCCTCCGTCCTGCAAGAACCGTCGACTATCCTCTGTAAGTTTCTTGAATTTTCAAAAAATCTCTATCTCTCACTGTCTTACTTTGAAAATGATCATTTGGTTCTGGAAAATTATGTGTAAATCTTGTTCCTCGTCTTTTGCTGTGGTTTTGAGATTGGAGGTGGGTTAGATCAGATTTCTCTTTGCTCTAATCTGAGTTTCGTTGATTTGAATTGATCCTCTATCCTTGTTGCGGGTTGTGCGAGTTGACATTCTTCCTTTTCTGTCTCCATGTTTCGAGCTCGCCTTGTGTGTATTAAGCCGCCTCACCCTTTGGTAATTAGGGTTTGATTTCATTATTTTGCATGTCCTTGCCGCATTGAAGCATTTCTACTCCTTGTTGCCTTGCTGTCGCCGCTCGCCGCGCGAATGATGTTAGAGCAGAGAGGAAGAGCGATGTTGCTATTGCGGAGAAGAAGAAAGCGGGAAAGTTGAGGATTGATGAACTTGACCAATAAACCCGAACCAGAGTGAATCAAACTGCCTGAGTTTCTAAATAATGTTTGGATTGATCCCGCTTATCCATATGATCAAGCCGACGATCATTTTTTATATTATAACAAAAAACTGAATTGAATCTGGATTGCAAAAACTTCTATGTTTTCAACATGGATAAGAGTGTTAGACTTCTAGGAAACGTTGGTTTAGTTATGTTTTTATTTTCTGTCTGCAGATTGAGAAGGTTAGAAGATTGATGCAGCTTGTGTAGAGTAGTGAACTATAAGTCAAAGGCCATAACGACCACCGCCATGGCAAACAGACGGTGTGTACAAGTACTAACTCGTCATGCCTCGGCCATTTTTTCTGGAAAGCCATATATCCACTCGCTGAAAATCACATCTTCCTTCCTCTACCAGAATTACCATACACGTGCCTCTACATCAACCTATCTTTGTACTAAAACTGATCCTTTGTGTAAGTGCTGGCCACACTCCCAATATCTCTCATCTGATAGTCGTAATGGCAATGACGATGATGATACTGAAGAAGATGAAGATGAAGATGAAGATGAAGATGAAGAAGCATATGATAGTAGTGAGGATGATGGTATTTCGGGGTTGAGTAGGGGTATGCAGAAGGAGTATACAAAGGAGGAGAAGGAGGCAGAAGCGGCTGATATTGGATATAAAGTAGTTGGGCCACTTGATCGATCTGATGGCGTTTTCAAGGGTTATGAGCCTGTTTTTGCTGTTGTTCAGGTACAAACTTGTGGCATGGCTTCATGAGTTTTTTGAATTTATGCACTCTTTTCTTTTGGCTGTTTCTGTAGATTGGCTCACACCAATTCAAGGTTAGCAATGGAGACAGTATTTTTACCGAAAGATTAAAATTCTGCGATGTGAATGACAAGGTTCGTAACTCCTATTCCATTTTCCATTGTGGATGTTTCAGTTATCGTAATTTCTTTTTTTCTTCTTTTTTTTAAAACTTGCATCCTAGCCTTCGTCCATGTTCTACATGGTCTCCCGCTTGAATGAGCCCTCCATCTGTTTTGACACTGCCTCTTTAAATGGCGTTGAACACGGAAGCAATTTTTGGGACCTAGAATTAAAATGTTGTTTGATTTAAGACTGTACTCATATTTTTTATATTCTGCTATTGTTTCCAGGTTGTAATTAACTAAGCTAAAGTTTGTGGTACTTCTATGATGTTTGATGGTTACAAAGATTCGACTTAAACATTAATTTGATAGGCTGCAGAGCAGTTTTTGGGTGAATTAGTATAGAAGAGCCCTTTTTTGGGACAGTGTGTGAAAGCTTAGAAAGGCTTCTAAAAAGCAACTGTTTTACATACATGAAAAGTTGCACCCTTCAGGTTGTCATAGACGAGGCTAAATTAAGTAGTCATGTACTTTGTTTCATGAGAAGTATCGCTTCAAGCAAATTAAAGAACGAGGAAAATATGAAATTTATCTTTTGGTAGCTTTTATTTAAGTTATTGTTACTCACTTGTGAGCACAAGAGGATCTTTTCTGCAATTTCTATTGCCCCATTTTCCTTGTCAGACTTGAATGCGCTTTTGTAGATTTTCTCATGTTTGTTGTTATATCTTGCCCAGTTTAGGATTCTGATTATGTGTTGAATTTTTTAACCTTTTCTGTACTTCATCTTGAGCAAGCTTTAATGAATTTTCTTTTTTAATAAATGGATTTATCTTTTGCAGTTGATATTGAATAGGGTCCTCATGCTTGGCTCAAGTAGCCAAACGATTGTAGGCAGGCCAACAATCCCAAGTGCAGTTGTTCAAGCAGTTGTTGAGGAACATGTAAGCGTGACGGCAAAACTATTTGCTTTTTGTTGTTAATGCATTATATTATAAACAACTTTACTGTTGTGTTCTTTCTGATGTGCATTGTTCTCTAGTGATTCTCGTGGACCATTGCAATGCATTTTTTAAGGACTAGTTCTCTAGTTCTTTATGCGCTTTATTAAATATACTTCTAGTCTTAGCCGCATTTGGGAACTTATACATTAAATGGATTTAGACAACGCAATTGATAAAATAGGAAGATCCAATTTGTTAGTCAGGGGGAAAGATTTACATTCTAGTTTTATTATATCCATCAGGTTAGAAGAAAATAATAAAATCTGGAGACTTTACAATGTTCAGAAGAATTCAAAAGGCAATTTCTTCGAGCAATTATTGCTTAAAAAATTTGTGAATGACAGAGGGCTTTCGTATATGAATTAGCCGAGTTGGCAATAAGTGTAATATGTTGCAGTACTTTATTTTCTATGATCATATCATATTAACTGTGTTGCTCTGCGACTCTGGTTGGTCTGCTGAGTGTAAATTTTTCTTTCCTGGCTCTCTTTATTTGTTTCAAAGTCCCAACGACATATTTCTTGAAAGTCCAATTCTCAAATTTGTGTTCCAATTCGTAAGATCTGAATGCTTTTTCCTCCTTTTCTGAAGGCCTTAGATGCAAAAATAATCATCTTCAAGAAAAAAAGGAGGAAGAATTACCGCCGAACCAAAGGACACCGCCAGGTATATCCTATTCCTATCCAGACTTTCCAGAAAGAAGTAAAAAGTTTATTATCCTAGTTTTCTGATGATCCTTTCTGGCAACATTTTATATCTTAGGAATTAACAAAGTTGAGGATCATCGATATCCAAGGTATTGACAAACCAGAAAACATTGGAAAGCCTTCAAAAACAGCTGATAAGAAGCAAGAAAAATTTGCAGTAGCTGCTTAGAAGAAGGTTCCATGATTCTAACTAACTGGAACTGCTAAATGGGTGTAGCTTTTTCTGATGTCATATGATATACTATACTTGATTCTAATTCTTTGATAGTGCGTCTTAGGCATGTTTTGTAGGAATGGCACTTTACTATGATTCCCATCCTTTTTGTTCCTTGACCTTTTCTATTTAAAAAATTGTTGTCATCATACATTTGTCAATAAGTTGAAATTGCATCAAATAAGATTATTCCATAATTATGTATGGTTCA

mRNA sequence

ATGGTCCCAAAACCCTCACCTCCAGCTATCGTCTCCACCACCGACGGCCATAATGTTGCACCTGTGGGCTTCCTCCTCCGTCCTGCAAGAACCGTCGACTATCCTCTCATTTCTACTCCTTGTTGCCTTGCTGTCGCCGCTCGCCGCGCGAATGATGTTAGAGCAGAGAGGAAGAGCGATGTTGCTATTGCGGAGAAGAAGAAAGCGGGAAACTTGTGTAGAGTAGTGAACTATAAGTCAAAGGCCATAACGACCACCGCCATGGCAAACAGACGGTGTGTACAAGTACTAACTCGTCATGCCTCGGCCATTTTTTCTGGAAAGCCATATATCCACTCGCTGAAAATCACATCTTCCTTCCTCTACCAGAATTACCATACACGTGCCTCTACATCAACCTATCTTTGTACTAAAACTGATCCTTTGTGTAAGTGCTGGCCACACTCCCAATATCTCTCATCTGATAGTCGTAATGGCAATGACGATGATGATACTGAAGAAGATGAAGATGAAGATGAAGATGAAGATGAAGAAGCATATGATAGTAGTGAGGATGATGGTATTTCGGGGTTGAGTAGGGGTATGCAGAAGGAGTATACAAAGGAGGAGAAGGAGGCAGAAGCGGCTGATATTGGATATAAAGTAGTTGGGCCACTTGATCGATCTGATGGCGTTTTCAAGGGTTATGAGCCTGTTTTTGCTGTTGTTCAGATTGGCTCACACCAATTCAAGGTTAGCAATGGAGACAGTATTTTTACCGAAAGATTAAAATTCTGCGATGTGAATGACAAGTTGATATTGAATAGGGTCCTCATGCTTGGCTCAAGTAGCCAAACGATTGTAGGCAGGCCAACAATCCCAAGTGCAGTTGTTCAAGCAGTTGTTGAGGAACATGCCTTAGATGCAAAAATAATCATCTTCAAGAAAAAAAGGAGGAAGAATTACCGCCGAACCAAAGGACACCGCCAGGAATTAACAAAGTTGAGGATCATCGATATCCAAGGTATTGACAAACCAGAAAACATTGGAAAGCCTTCAAAAACAGCTGATAAGAAGCAAGAAAAATTTGCAGTAGCTGCTTAGAAGAAGGTTCCATGATTCTAACTAACTGGAACTGCTAAATGGGTGTAGCTTTTTCTGATGTCATATGATATACTATACTTGATTCTAATTCTTTGATAGTGCGTCTTAGGCATGTTTTGTAGGAATGGCACTTTACTATGATTCCCATCCTTTTTGTTCCTTGACCTTTTCTATTTAAAAAATTGTTGTCATCATACATTTGTCAATAAGTTGAAATTGCATCAAATAAGATTATTCCATAATTATGTATGGTTCA

Coding sequence (CDS)

ATGGTCCCAAAACCCTCACCTCCAGCTATCGTCTCCACCACCGACGGCCATAATGTTGCACCTGTGGGCTTCCTCCTCCGTCCTGCAAGAACCGTCGACTATCCTCTCATTTCTACTCCTTGTTGCCTTGCTGTCGCCGCTCGCCGCGCGAATGATGTTAGAGCAGAGAGGAAGAGCGATGTTGCTATTGCGGAGAAGAAGAAAGCGGGAAACTTGTGTAGAGTAGTGAACTATAAGTCAAAGGCCATAACGACCACCGCCATGGCAAACAGACGGTGTGTACAAGTACTAACTCGTCATGCCTCGGCCATTTTTTCTGGAAAGCCATATATCCACTCGCTGAAAATCACATCTTCCTTCCTCTACCAGAATTACCATACACGTGCCTCTACATCAACCTATCTTTGTACTAAAACTGATCCTTTGTGTAAGTGCTGGCCACACTCCCAATATCTCTCATCTGATAGTCGTAATGGCAATGACGATGATGATACTGAAGAAGATGAAGATGAAGATGAAGATGAAGATGAAGAAGCATATGATAGTAGTGAGGATGATGGTATTTCGGGGTTGAGTAGGGGTATGCAGAAGGAGTATACAAAGGAGGAGAAGGAGGCAGAAGCGGCTGATATTGGATATAAAGTAGTTGGGCCACTTGATCGATCTGATGGCGTTTTCAAGGGTTATGAGCCTGTTTTTGCTGTTGTTCAGATTGGCTCACACCAATTCAAGGTTAGCAATGGAGACAGTATTTTTACCGAAAGATTAAAATTCTGCGATGTGAATGACAAGTTGATATTGAATAGGGTCCTCATGCTTGGCTCAAGTAGCCAAACGATTGTAGGCAGGCCAACAATCCCAAGTGCAGTTGTTCAAGCAGTTGTTGAGGAACATGCCTTAGATGCAAAAATAATCATCTTCAAGAAAAAAAGGAGGAAGAATTACCGCCGAACCAAAGGACACCGCCAGGAATTAACAAAGTTGAGGATCATCGATATCCAAGGTATTGACAAACCAGAAAACATTGGAAAGCCTTCAAAAACAGCTGATAAGAAGCAAGAAAAATTTGCAGTAGCTGCTTAG
Homology
[Close]
BLAST of CmoCh07G008420 vs. Swiss-Prot
Match: RM21_ARATH (50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana GN=RPL21M PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 6.3e-63
Identity = 150/282 (53.19%), Postives = 198/282 (70.21%), Query Frame = 1 

Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYH-TRASTSTYL----CTKTDPL 147
           MA+ RC + L+R A+ +FS    I+  +  SSF    +  T  S  T +     T+  P 
Sbjct: 1   MASLRCFRELSRRATTVFS----INQTRSISSFHGIEFSGTSISHGTVIPNRSLTRNLPW 60

Query: 148 CKCWPHSQ--YLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYT 207
              W  SQ    SS++++ ++D+++ E ED+DE+E E+  DS++ +        +++EY+
Sbjct: 61  YSHWYRSQDRCFSSNTKDTDEDEESSEGEDDDEEEGEDFEDSADME--------VEREYS 120

Query: 208 KEEKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCD 267
             EK  EA +IGYKV+GPL  S+ +FK YEPVFA+VQIGSHQFKVSNGDSIFTE+LKFCD
Sbjct: 121 PAEKVEEAEEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCD 180

Query: 268 VNDKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKG 327
           +NDKL L +VL+LGS+SQTI+GRP +P A V AVVEEHALD K++IFKKKRRKNYRRT+G
Sbjct: 181 INDKLELTKVLLLGSASQTIIGRPILPDATVHAVVEEHALDEKVLIFKKKRRKNYRRTRG 240

Query: 328 HRQELTKLRIIDIQGIDKPEN--IGKPSKTADKKQEKFAVAA 361
           HRQELTKLRI DIQGI+KPE   + KPSK A  +Q K  + A
Sbjct: 241 HRQELTKLRITDIQGIEKPEPKIVHKPSKEAVTEQTKAELVA 270

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BLAST of CmoCh07G008420 vs. Swiss-Prot
Match: RK21_SPIOL (50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea GN=RPL21 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.4e-24
Identity = 55/108 (50.93%), Postives = 78/108 (72.22%), Query Frame = 1 

Query: 230 EPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLMLGSSSQTIVGRPTIPSA 289
           E +FAVV IGS Q+ V  G  I+T+RLK   VNDK++LN+VL++G+ + T +G P + +A
Sbjct: 121 EEIFAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNKVLLVGTKASTYIGTPIVTNA 180

Query: 290 VVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTKLRIIDIQGID 338
            V AVVEE  LD K+I+FK K++KNYRR  GHRQ +T+++I  I G +
Sbjct: 181 AVHAVVEEQLLDDKVIVFKYKKKKNYRRNIGHRQPITRIKITGITGYE 228

[Close]
BLAST of CmoCh07G008420 vs. Swiss-Prot
Match: RK21_ARATH (50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana GN=RPL21 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-21
Identity = 53/136 (38.97%), Postives = 84/136 (61.76%), Query Frame = 1 

Query: 203 EKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVN 262
           E E E  DI   VV  +          E +FAV+ +G  Q+ V  G  ++T+RLK  +V+
Sbjct: 71  EAEPETTDIEAVVVSDVSEVTEEKAKREEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVD 130

Query: 263 DKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHR 322
           D+++LN+VL++G+ + T +G+P + +A V AVVE   L+ K+++FK K +K YRR  GHR
Sbjct: 131 DQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHR 190

Query: 323 QELTKLRIIDIQGIDK 339
           Q  T++RI  I G ++
Sbjct: 191 QPNTRIRITGITGYEE 206

[Close]
BLAST of CmoCh07G008420 vs. Swiss-Prot
Match: RL21_RICBR (50S ribosomal protein L21 OS=Rickettsia bellii (strain RML369-C) GN=rplU PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.4e-17
Identity = 49/103 (47.57%), Postives = 70/103 (67.96%), Query Frame = 1 

Query: 232 VFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLMLGSSSQ-TIVGRPTIPSAV 291
           +FAV++ G  Q+KV     I  E+++  ++  K+ LN+VLM+G  S+ + +G P +  AV
Sbjct: 1   MFAVIKAGGKQYKVDQNSVIKVEKIEG-ELGSKIQLNQVLMMGEYSKPSFIGTPLVKGAV 60

Query: 292 VQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTKLRIIDI 334
           V A +     D KII+FKKKRRKNYRR  GHRQELT+L+I+DI
Sbjct: 61  VTAEITNQLRDNKIIVFKKKRRKNYRRKAGHRQELTELKILDI 102

[Close]
BLAST of CmoCh07G008420 vs. Swiss-Prot
Match: RL21_RICB8 (50S ribosomal protein L21 OS=Rickettsia bellii (strain OSU 85-389) GN=rplU PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.4e-17
Identity = 49/103 (47.57%), Postives = 70/103 (67.96%), Query Frame = 1 

Query: 232 VFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLILNRVLMLGSSSQ-TIVGRPTIPSAV 291
           +FAV++ G  Q+KV     I  E+++  ++  K+ LN+VLM+G  S+ + +G P +  AV
Sbjct: 1   MFAVIKAGGKQYKVDQNSVIKVEKIEG-ELGSKIQLNQVLMMGEYSKPSFIGTPLVKGAV 60

Query: 292 VQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTKLRIIDI 334
           V A +     D KII+FKKKRRKNYRR  GHRQELT+L+I+DI
Sbjct: 61  VTAEITNQLRDNKIIVFKKKRRKNYRRKAGHRQELTELKILDI 102

[Close]
BLAST of CmoCh07G008420 vs. TrEMBL
Match: E5GBZ0_CUCME (50S ribosomal protein l21 mitochondrial OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 2.1e-113
Identity = 225/281 (80.07%), Postives = 247/281 (87.90%), Query Frame = 1 

Query: 81  KAITTTAMANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTD 140
           KAI  T MANRRC+QVLTRHASAI S KPYIH+LKI  S L++N+HT AS S  L  KTD
Sbjct: 3   KAIRITTMANRRCLQVLTRHASAILSTKPYIHTLKIAPSLLFENFHTHASLSNCLSAKTD 62

Query: 141 P-LCKCWPHSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEY 200
           P LC  W H++YLSSDSRNGN+DD TE   DEDEDED+EAYDS EDDGIS  SR M+KEY
Sbjct: 63  PSLCTYWSHTRYLSSDSRNGNEDDFTE---DEDEDEDDEAYDS-EDDGISTSSRVMKKEY 122

Query: 201 TKEEKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFC 260
           TKEE EAEAA IGYKV+GPLD+S+G+FK YEP FAVVQIGSHQFKVSNGDSIFTERLKFC
Sbjct: 123 TKEEMEAEAAAIGYKVLGPLDQSEGIFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKFC 182

Query: 261 DVNDKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTK 320
           DVNDKLILN+VL++GSSSQTIVGRPT+PSA VQAVVEEHALDAK+IIFKKKRRKNYRRTK
Sbjct: 183 DVNDKLILNKVLLVGSSSQTIVGRPTVPSAFVQAVVEEHALDAKVIIFKKKRRKNYRRTK 242

Query: 321 GHRQELTKLRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           GHRQELTKLRI+DIQGI+KPENIGKPSK  DKKQE+ AVAA
Sbjct: 243 GHRQELTKLRIVDIQGIEKPENIGKPSKVTDKKQEQVAVAA 279

[Close]
BLAST of CmoCh07G008420 vs. TrEMBL
Match: A0A0A0KFG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G357000 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 1.4e-112
Identity = 224/274 (81.75%), Postives = 244/274 (89.05%), Query Frame = 1 

Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDP-LCKCW 147
           MANRRC+QVLTRHASAIFS KPYIH LK   SFL QN+ T AS S  L  KTDP LC  W
Sbjct: 1   MANRRCLQVLTRHASAIFSTKPYIHPLKTAPSFLSQNFRTHASLSNCLSAKTDPSLCTYW 60

Query: 148 PHSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEA 207
           PH++YLSSDSRNG++DD TE   DEDEDED+EAYDS EDDGIS  SR M+KEYTKEE EA
Sbjct: 61  PHTRYLSSDSRNGSEDDFTE---DEDEDEDDEAYDS-EDDGISTSSRVMKKEYTKEEMEA 120

Query: 208 EAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLI 267
           EAA IGYKV+GPLD+S+GVFK YEP FAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLI
Sbjct: 121 EAAAIGYKVLGPLDQSEGVFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLI 180

Query: 268 LNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELT 327
           LN+VL++GSSSQTIVGRPT+PSAVVQAVVEEHALDAK+IIFKKKRRKNYRRTKGHRQELT
Sbjct: 181 LNKVLLVGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELT 240

Query: 328 KLRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           KLRI+DIQG++KPENIGKPSK ADKKQE+ AVAA
Sbjct: 241 KLRIVDIQGVEKPENIGKPSKVADKKQEQVAVAA 270

[Close]
BLAST of CmoCh07G008420 vs. TrEMBL
Match: A0A151UAR2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_020515 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 5.0e-75
Identity = 171/273 (62.64%), Postives = 201/273 (73.63%), Query Frame = 1 

Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDPLCKCWP 147
           MA+RRC++ LT+    +F     + SL +           RA  S+ L  K       WP
Sbjct: 1   MASRRCLRALTKTTPFLFRSSSSLRSLTVPP-------FPRAKASSPLFAKPASAFARWP 60

Query: 148 HSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEAE 207
           H +Y SSD R+ ++DD++EED D+DE+ED E     + D     SRG +K YT EEKEAE
Sbjct: 61  HPRYFSSDKRS-DEDDNSEEDYDDDEEEDYE-----DGDDYVAASRG-KKVYTAEEKEAE 120

Query: 208 AADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLIL 267
           AADIGY+VVGPL + D VFK YEPVFAVVQIGSHQFKVSNGDSIFTERLKFC+VNDKLIL
Sbjct: 121 AADIGYRVVGPLQKDDDVFKPYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLIL 180

Query: 268 NRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELTK 327
           N+VL+LGS+SQTIVGRP +P A V AVVEEHALDAK+IIFKKKRRKNYRRTKGHRQELTK
Sbjct: 181 NKVLLLGSASQTIVGRPIVPDASVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTK 240

Query: 328 LRIIDIQGIDKPENI---GKPSKTADKKQEKFA 358
           LRI DIQGI+KP+N     KPSK+  K+QEK A
Sbjct: 241 LRITDIQGIEKPQNAIKPEKPSKSTKKEQEKVA 259

[Close]
BLAST of CmoCh07G008420 vs. TrEMBL
Match: I6LNS9_HEVBR (Mitochondrial 50S ribosomal protein L21 OS=Hevea brasiliensis GN=mRPL21 PE=2 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.7e-73
Identity = 174/282 (61.70%), Postives = 202/282 (71.63%), Query Frame = 1 

Query: 88  MANRRCVQVLTRHASAIFSGKP--YIHSLKITSSFLYQNYHTRA--STSTYLCTKTDPL- 147
           MA RRC+  LTR A A+ S  P    H  K+ +SF   N         S+++ TK D + 
Sbjct: 1   MAQRRCLHTLTRQAIALLSSNPTTLYHPCKVAASFPNLNSVKALLICKSSHVFTKADSIW 60

Query: 148 CKCWP--HSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYT 207
           C  WP  H +Y SSDSR+ +++DD E++E   ED D E    S+          +++EYT
Sbjct: 61  CSFWPYHHRRYFSSDSRDESENDD-EDEETAGEDSDGEEVKGSD----------LKREYT 120

Query: 208 KEEKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCD 267
            EEKE EAA IGYKVVGPL +SD VFK YEPVFAVVQIGSHQFKVSNGD IFTE+LKFC+
Sbjct: 121 AEEKEEEAAAIGYKVVGPLQKSDLVFKPYEPVFAVVQIGSHQFKVSNGDCIFTEKLKFCE 180

Query: 268 VNDKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKG 327
           VNDKLILN+VL+LGSSSQTIVGRPT+P A V AVVEEHALDAK IIFKKKRRKNYRRTKG
Sbjct: 181 VNDKLILNKVLLLGSSSQTIVGRPTVPDAAVHAVVEEHALDAKAIIFKKKRRKNYRRTKG 240

Query: 328 HRQELTKLRIIDIQGIDKPEN--IGKPSKTADKKQEKFAVAA 361
           HRQELTKLRI DIQGI+KPE     KP  +  K+QEK AVAA
Sbjct: 241 HRQELTKLRITDIQGIEKPEMKVDPKPKMSGVKQQEKIAVAA 271

[Close]
BLAST of CmoCh07G008420 vs. TrEMBL
Match: I1M0A7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G179500 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 4.4e-71
Identity = 165/277 (59.57%), Postives = 203/277 (73.29%), Query Frame = 1 

Query: 88  MANRRCVQVLTRHASA-IFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDPLCKCW 147
           MA+RRC++ LT+  +  +F     + SL +            A+ S+ + T    +   W
Sbjct: 1   MASRRCLRALTQKTTPFLFRNASSLRSLTVPP-------FPNANASSPVFTVRASVFAQW 60

Query: 148 PHSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEA 207
           PH +Y SS+ ++ + D+D  +D DED D++EE Y   +DD    +SRG +K YT EEKEA
Sbjct: 61  PHLRYFSSEKKDDHSDED--DDGDEDYDDEEEDYVDDDDDDDVPVSRG-KKVYTAEEKEA 120

Query: 208 EAADIGYKVVGPLDRS-DGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKL 267
           EAA IGY+VVGPL +  D VFK YEPVFAVVQIGSHQFKVSN DSIFTERLKFC+VNDKL
Sbjct: 121 EAAAIGYRVVGPLQKDEDSVFKPYEPVFAVVQIGSHQFKVSNRDSIFTERLKFCEVNDKL 180

Query: 268 ILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQEL 327
           ILN+VL+LGS+SQTI+GRP +P A V AVVEEHALDAK+IIFKKKRRKNYRRTKGHRQEL
Sbjct: 181 ILNKVLLLGSASQTIIGRPIVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQEL 240

Query: 328 TKLRIIDIQGIDKPENI--GKPSKTADKKQEKFAVAA 361
           TKLRI DIQGI+KP+N+   KP K A K++EK AV A
Sbjct: 241 TKLRITDIQGIEKPQNVLPEKPPKPAKKEKEKVAVTA 267

[Close]
BLAST of CmoCh07G008420 vs. TAIR10
Match: AT4G30930.1 (AT4G30930.1 Ribosomal protein L21)

HSP 1 Score: 242.7 bits (618), Expect = 3.6e-64
Identity = 150/282 (53.19%), Postives = 198/282 (70.21%), Query Frame = 1 

Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYH-TRASTSTYL----CTKTDPL 147
           MA+ RC + L+R A+ +FS    I+  +  SSF    +  T  S  T +     T+  P 
Sbjct: 1   MASLRCFRELSRRATTVFS----INQTRSISSFHGIEFSGTSISHGTVIPNRSLTRNLPW 60

Query: 148 CKCWPHSQ--YLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYT 207
              W  SQ    SS++++ ++D+++ E ED+DE+E E+  DS++ +        +++EY+
Sbjct: 61  YSHWYRSQDRCFSSNTKDTDEDEESSEGEDDDEEEGEDFEDSADME--------VEREYS 120

Query: 208 KEEKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCD 267
             EK  EA +IGYKV+GPL  S+ +FK YEPVFA+VQIGSHQFKVSNGDSIFTE+LKFCD
Sbjct: 121 PAEKVEEAEEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCD 180

Query: 268 VNDKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKG 327
           +NDKL L +VL+LGS+SQTI+GRP +P A V AVVEEHALD K++IFKKKRRKNYRRT+G
Sbjct: 181 INDKLELTKVLLLGSASQTIIGRPILPDATVHAVVEEHALDEKVLIFKKKRRKNYRRTRG 240

Query: 328 HRQELTKLRIIDIQGIDKPEN--IGKPSKTADKKQEKFAVAA 361
           HRQELTKLRI DIQGI+KPE   + KPSK A  +Q K  + A
Sbjct: 241 HRQELTKLRITDIQGIEKPEPKIVHKPSKEAVTEQTKAELVA 270

[Close]
BLAST of CmoCh07G008420 vs. TAIR10
Match: AT1G35680.1 (AT1G35680.1 Ribosomal protein L21)

HSP 1 Score: 105.5 bits (262), Expect = 6.8e-23
Identity = 53/136 (38.97%), Postives = 84/136 (61.76%), Query Frame = 1 

Query: 203 EKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVN 262
           E E E  DI   VV  +          E +FAV+ +G  Q+ V  G  ++T+RLK  +V+
Sbjct: 71  EAEPETTDIEAVVVSDVSEVTEEKAKREEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVD 130

Query: 263 DKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHR 322
           D+++LN+VL++G+ + T +G+P + +A V AVVE   L+ K+++FK K +K YRR  GHR
Sbjct: 131 DQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHR 190

Query: 323 QELTKLRIIDIQGIDK 339
           Q  T++RI  I G ++
Sbjct: 191 QPNTRIRITGITGYEE 206

[Close]
BLAST of CmoCh07G008420 vs. NCBI nr
Match: gi|659129777|ref|XP_008464840.1| (PREDICTED: 50S ribosomal protein L21, mitochondrial [Cucumis melo])

HSP 1 Score: 417.2 bits (1071), Expect = 3.0e-113
Identity = 225/281 (80.07%), Postives = 247/281 (87.90%), Query Frame = 1 

Query: 81  KAITTTAMANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTD 140
           KAI  T MANRRC+QVLTRHASAI S KPYIH+LKI  S L++N+HT AS S  L  KTD
Sbjct: 3   KAIRITTMANRRCLQVLTRHASAILSTKPYIHTLKIAPSLLFENFHTHASLSNCLSAKTD 62

Query: 141 P-LCKCWPHSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEY 200
           P LC  W H++YLSSDSRNGN+DD TE   DEDEDED+EAYDS EDDGIS  SR M+KEY
Sbjct: 63  PSLCTYWSHTRYLSSDSRNGNEDDFTE---DEDEDEDDEAYDS-EDDGISTSSRVMKKEY 122

Query: 201 TKEEKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFC 260
           TKEE EAEAA IGYKV+GPLD+S+G+FK YEP FAVVQIGSHQFKVSNGDSIFTERLKFC
Sbjct: 123 TKEEMEAEAAAIGYKVLGPLDQSEGIFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKFC 182

Query: 261 DVNDKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTK 320
           DVNDKLILN+VL++GSSSQTIVGRPT+PSA VQAVVEEHALDAK+IIFKKKRRKNYRRTK
Sbjct: 183 DVNDKLILNKVLLVGSSSQTIVGRPTVPSAFVQAVVEEHALDAKVIIFKKKRRKNYRRTK 242

Query: 321 GHRQELTKLRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           GHRQELTKLRI+DIQGI+KPENIGKPSK  DKKQE+ AVAA
Sbjct: 243 GHRQELTKLRIVDIQGIEKPENIGKPSKVTDKKQEQVAVAA 279

[Close]
BLAST of CmoCh07G008420 vs. NCBI nr
Match: gi|449452985|ref|XP_004144239.1| (PREDICTED: 50S ribosomal protein L21, mitochondrial [Cucumis sativus])

HSP 1 Score: 414.5 bits (1064), Expect = 1.9e-112
Identity = 224/274 (81.75%), Postives = 244/274 (89.05%), Query Frame = 1 

Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSFLYQNYHTRASTSTYLCTKTDP-LCKCW 147
           MANRRC+QVLTRHASAIFS KPYIH LK   SFL QN+ T AS S  L  KTDP LC  W
Sbjct: 1   MANRRCLQVLTRHASAIFSTKPYIHPLKTAPSFLSQNFRTHASLSNCLSAKTDPSLCTYW 60

Query: 148 PHSQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKEA 207
           PH++YLSSDSRNG++DD TE   DEDEDED+EAYDS EDDGIS  SR M+KEYTKEE EA
Sbjct: 61  PHTRYLSSDSRNGSEDDFTE---DEDEDEDDEAYDS-EDDGISTSSRVMKKEYTKEEMEA 120

Query: 208 EAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLI 267
           EAA IGYKV+GPLD+S+GVFK YEP FAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLI
Sbjct: 121 EAAAIGYKVLGPLDQSEGVFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKLI 180

Query: 268 LNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQELT 327
           LN+VL++GSSSQTIVGRPT+PSAVVQAVVEEHALDAK+IIFKKKRRKNYRRTKGHRQELT
Sbjct: 181 LNKVLLVGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELT 240

Query: 328 KLRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           KLRI+DIQG++KPENIGKPSK ADKKQE+ AVAA
Sbjct: 241 KLRIVDIQGVEKPENIGKPSKVADKKQEQVAVAA 270

[Close]
BLAST of CmoCh07G008420 vs. NCBI nr
Match: gi|645237207|ref|XP_008225099.1| (PREDICTED: 50S ribosomal protein L21, mitochondrial [Prunus mume])

HSP 1 Score: 300.8 bits (769), Expect = 3.1e-78
Identity = 176/281 (62.63%), Postives = 211/281 (75.09%), Query Frame = 1 

Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSF-LYQNYHTRASTSTYLCTKTDPLCKCW 147
           MANRR +QVL+RHASA+FS      SL+   +  +YQ   T  S    + T  DP    W
Sbjct: 3   MANRRRLQVLSRHASALFSTNTTFQSLQTPPALPIYQPLKTLTSKFPLIFTNPDPN---W 62

Query: 148 PHSQYLSSDSRNGNDDDDTE-------EDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEY 207
             +++ SS SR G+ ++D E       +D+D+D D+D+EA   SED+ +SG   G ++EY
Sbjct: 63  SQTRHFSS-SRVGDVNEDNEHSEEEEDDDDDDDYDDDDEAVGDSEDESVSGC--GSKREY 122

Query: 208 TKEEKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFC 267
           T EEKEAEAA IGY+V+GPL +SD VFK YEPVFAVVQIGSHQFKVSNGD IFTERLKFC
Sbjct: 123 TAEEKEAEAAAIGYQVIGPLQKSDRVFKPYEPVFAVVQIGSHQFKVSNGDCIFTERLKFC 182

Query: 268 DVNDKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTK 327
           +VNDKLILN+VL+LGSSSQTI+GRP +P A V AVVEEHALDAK+IIFKKKRRKNYRRTK
Sbjct: 183 EVNDKLILNKVLLLGSSSQTIIGRPLLPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTK 242

Query: 328 GHRQELTKLRIIDIQGIDKPENIGKPSKTADKKQEKFAVAA 361
           GHRQELTKLRI+D+QGI+KP+   KP K   KK EK AVAA
Sbjct: 243 GHRQELTKLRIVDVQGIEKPDVPEKPPKAPGKKPEKVAVAA 277

[Close]
BLAST of CmoCh07G008420 vs. NCBI nr
Match: gi|694323722|ref|XP_009352917.1| (PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76
Identity = 177/280 (63.21%), Postives = 205/280 (73.21%), Query Frame = 1 

Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSF-LYQNYHTRASTSTYLCTKTDPLCKCW 147
           MA RR +Q LTRHASA+FS  P  HSL       +YQ   T  S  + + +  DP     
Sbjct: 1   MATRRPLQALTRHASALFSKNPSFHSLPTPPPLPIYQPLKTLTSNFSLIFSNPDPTRSLT 60

Query: 148 PHSQYLSSDSRNGNDDDDTE---EDEDEDEDEDE-EAYDSSEDDGISGLSRGMQKEYTKE 207
            H    SS  R G+ ++D E   +DEDEDED+DE E    SED+     S G ++EYT E
Sbjct: 61  RH---FSSKPRIGDVNEDNEHSDDDEDEDEDDDESEGVGDSEDESAYRCS-GSKREYTPE 120

Query: 208 EKEAEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVN 267
           EKE EAA IGY+V+GPL RSD VFK YEPVFAVVQ+GSHQFKVSNGD IFTERLKFC+VN
Sbjct: 121 EKEVEAAAIGYQVIGPLQRSDRVFKPYEPVFAVVQVGSHQFKVSNGDCIFTERLKFCEVN 180

Query: 268 DKLILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHR 327
           DKL+LN+VLMLGSSSQTI+GRP +P A V AVVEEHALDAK+IIFKKKRRKNYRRTKGHR
Sbjct: 181 DKLVLNKVLMLGSSSQTIIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHR 240

Query: 328 QELTKLRIIDIQGIDKPENI--GKPSKTADKKQEKFAVAA 361
           QELTKLRI+D+QGI+KPE +   KPS+   KK EK AVAA
Sbjct: 241 QELTKLRIVDVQGIEKPEPVVTEKPSRAPGKKTEKVAVAA 276

[Close]
BLAST of CmoCh07G008420 vs. NCBI nr
Match: gi|470115673|ref|XP_004294019.1| (PREDICTED: 50S ribosomal protein L21, mitochondrial [Fragaria vesca subsp. vesca])

HSP 1 Score: 292.0 bits (746), Expect = 1.5e-75
Identity = 169/277 (61.01%), Postives = 206/277 (74.37%), Query Frame = 1 

Query: 88  MANRRCVQVLTRHASAIFSGKPYIHSLKITSSF-LYQNYHTRASTSTYLCTKTDPLCKCW 147
           MANRRC+Q+LTR  SA+FS  P +H+L        ++      S S  + +        W
Sbjct: 1   MANRRCLQLLTRRVSALFSANPPLHTLSTPPPLSTHEPLKALVSKSPLIFSPN------W 60

Query: 148 PH-SQYLSSDSRNGNDDDDTEEDEDEDEDEDEEAYDSSEDDGISGLSRGMQKEYTKEEKE 207
              +++ SSD  +G DD  +E+D+D+D+++D+  Y S  DDG      G ++EYT EE  
Sbjct: 61  SAPTRHFSSDRNDGVDD--SEDDDDDDDEDDDIGYSS--DDGSLSKGGGSKREYTPEEMA 120

Query: 208 AEAADIGYKVVGPLDRSDGVFKGYEPVFAVVQIGSHQFKVSNGDSIFTERLKFCDVNDKL 267
           AEAA IGYKVVGPL+ +DGVFK YEPVFAV+QIGSHQFKVSNGDSIFTERLKFC+VNDKL
Sbjct: 121 AEAAGIGYKVVGPLETTDGVFKPYEPVFAVIQIGSHQFKVSNGDSIFTERLKFCEVNDKL 180

Query: 268 ILNRVLMLGSSSQTIVGRPTIPSAVVQAVVEEHALDAKIIIFKKKRRKNYRRTKGHRQEL 327
           ILN+VL++G+SSQT++GRP +P A V AVVEEHALDAK++IFKKKRRKNYRRTKGHRQEL
Sbjct: 181 ILNKVLLVGTSSQTMIGRPIVPDATVHAVVEEHALDAKVLIFKKKRRKNYRRTKGHRQEL 240

Query: 328 TKLRIIDIQGIDKPENI--GKPSKTADKKQEKFAVAA 361
           TKLRIIDIQGI KPE +   KPSKT  KK EK AVAA
Sbjct: 241 TKLRIIDIQGIQKPEPVVTEKPSKTHGKKPEKVAVAA 267

The following BLAST results are available for this feature:
BLAST of CmoCh07G008420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RM21_ARATH6.3e-6353.1950S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana GN=RPL21M PE=2 ... [more]
RK21_SPIOL4.4e-2450.9350S ribosomal protein L21, chloroplastic OS=Spinacia oleracea GN=RPL21 PE=1 SV=1[more]
RK21_ARATH1.2e-2138.9750S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana GN=RPL21 PE=2 S... [more]
RL21_RICBR2.4e-1747.5750S ribosomal protein L21 OS=Rickettsia bellii (strain RML369-C) GN=rplU PE=3 SV... [more]
RL21_RICB82.4e-1747.5750S ribosomal protein L21 OS=Rickettsia bellii (strain OSU 85-389) GN=rplU PE=3 ... [more]
BLAST of CmoCh07G008420 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBZ0_CUCME2.1e-11380.0750S ribosomal protein l21 mitochondrial OS=Cucumis melo subsp. melo PE=3 SV=1[more]
A0A0A0KFG2_CUCSA1.4e-11281.75Uncharacterized protein OS=Cucumis sativus GN=Csa_6G357000 PE=3 SV=1[more]
A0A151UAR2_CAJCA5.0e-7562.64Uncharacterized protein OS=Cajanus cajan GN=KK1_020515 PE=3 SV=1[more]
I6LNS9_HEVBR4.7e-7361.70Mitochondrial 50S ribosomal protein L21 OS=Hevea brasiliensis GN=mRPL21 PE=2 SV=... [more]
I1M0A7_SOYBN4.4e-7159.57Uncharacterized protein OS=Glycine max GN=GLYMA_13G179500 PE=3 SV=1[more]
BLAST of CmoCh07G008420 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G30930.13.6e-6453.19 Ribosomal protein L21[more]
AT1G35680.16.8e-2338.97 Ribosomal protein L21[more]
BLAST of CmoCh07G008420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129777|ref|XP_008464840.1|3.0e-11380.07PREDICTED: 50S ribosomal protein L21, mitochondrial [Cucumis melo][more]
gi|449452985|ref|XP_004144239.1|1.9e-11281.75PREDICTED: 50S ribosomal protein L21, mitochondrial [Cucumis sativus][more]
gi|645237207|ref|XP_008225099.1|3.1e-7862.63PREDICTED: 50S ribosomal protein L21, mitochondrial [Prunus mume][more]
gi|694323722|ref|XP_009352917.1|1.3e-7663.21PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Pyrus x bretschneideri... [more]
gi|470115673|ref|XP_004294019.1|1.5e-7561.01PREDICTED: 50S ribosomal protein L21, mitochondrial [Fragaria vesca subsp. vesca... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001787Ribosomal_L21
IPR018258Ribosomal_L21_CS
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009567 double fertilization forming a zygote and endosperm
biological_process GO:0010197 polar nucleus fusion
biological_process GO:0009555 pollen development
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0043412 macromolecule modification
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G008420.1CmoCh07G008420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001787Ribosomal protein L21HAMAPMF_01363Ribosomal_L21coord: 232..335
score: 22
IPR001787Ribosomal protein L21TIGRFAMsTIGR00061TIGR00061coord: 233..333
score: 2.2
IPR018258Ribosomal protein L21, conserved sitePROSITEPS01169RIBOSOMAL_L21coord: 304..326
scor
NoneNo IPR availablePANTHERPTHR2134950S RIBOSOMAL PROTEIN L21coord: 162..355
score: 2.1E
NoneNo IPR availablePANTHERPTHR21349:SF039S RIBOSOMAL PROTEIN L21, MITOCHONDRIALcoord: 162..355
score: 2.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G008420CmaCh07G008120Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G008420Cp4.1LG19g04620Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G008420Carg05323Silver-seed gourdcarcmoB1100
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G008420Silver-seed gourdcarcmoB0338
CmoCh07G008420Cucumber (Chinese Long) v3cmocucB1020
CmoCh07G008420Watermelon (97103) v2cmowmbB849
CmoCh07G008420Wax gourdcmowgoB1055
CmoCh07G008420Wax gourdcmowgoB1066
CmoCh07G008420Cucurbita moschata (Rifu)cmocmoB455
CmoCh07G008420Cucumber (Gy14) v1cgycmoB0150
CmoCh07G008420Cucurbita maxima (Rimu)cmacmoB667
CmoCh07G008420Wild cucumber (PI 183967)cmocpiB871
CmoCh07G008420Wild cucumber (PI 183967)cmocpiB873
CmoCh07G008420Wild cucumber (PI 183967)cmocpiB874
CmoCh07G008420Watermelon (Charleston Gray)cmowcgB755
CmoCh07G008420Cucumber (Chinese Long) v2cmocuB863
CmoCh07G008420Cucumber (Chinese Long) v2cmocuB865
CmoCh07G008420Melon (DHL92) v3.5.1cmomeB783
CmoCh07G008420Watermelon (97103) v1cmowmB814
CmoCh07G008420Cucurbita pepo (Zucchini)cmocpeB806
CmoCh07G008420Bottle gourd (USVL1VR-Ls)cmolsiB774
CmoCh07G008420Cucumber (Gy14) v2cgybcmoB843
CmoCh07G008420Melon (DHL92) v3.6.1cmomedB889