CmoCh07G008380 (gene) Cucurbita moschata (Rifu)

NameCmoCh07G008380
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionS-adenosyl-L-methionine-dependent methyltransferases superfamily protein
LocationCmo_Chr07 : 3941943 .. 3942725 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAACTGACGAAAGCAATGTGCTGGGAACTTGTGTCAATTAACAAGGATACAGTAGATGAAGTTAGTGCAGCCATATATCGAAAACCTACCAATAATGATTGTTACGAACAGAGGTCCGAAAAAGAGCCACCTGTCTGCCCGAATTCAGATGATCCAAATGCAGCCTGGTACTTATCTGTTCTGATTTTAATTTCCCAAGTTAGCAAATGTGTACTCACATTCTATCAAAGATCCAATTTGTAACAACTCAAGCCCACCCCTTGTCTACTAGGGAGAGATTTCCATACTCTTGTAAAGAATGCTTCATTCTTCTATCCAACCGATATGGGATCTCACAATCCACCCCTTTTGGGGCCGAGCGTCCTCACTGGCACTCGTTTCGTTCTCCAATCGATGTGGGACCCTCAAATCCACCCCCTTCGGGGCTTAGTGTCCTTGTTGGCACATCGTCCGGTGTCTGACTCTGATACCATTTGTAACAGCCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTAGGCTTTCCCTAAAGGTTTTTAAAACGTGTCTCCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCATTCTCCTCTCCAACCGATGTGGCAGGAATGCTTCATTCTCCTCTCCAACCGATGTGGCATCTCACCCAATTACTGGGAAAGGATCCATTAAAATATTGAGCGTCTAGTCCAGAATCATTCCCCTTCACATGTGCTTTCTTGTTCGTTCTATTATTATTTCTAAATTAGAAATCACAAAGCTTAGACTAG

mRNA sequence

ATGAAAGAACTGACGAAAGCAATGTGCTGGGAACTTGTGTCAATTAACAAGGATACAGTAGATGAAGTTAGTGCAGCCATATATCGAAAACCTACCAATAATGATTGTTACGAACAGAGGTCCGAAAAAGAGCCACCTGTCTGCCCGAATTCAGATGATCCAAATGCAGCCTGGTACTTATCTGTTCTGATTTTAATTTCCCAAAAATCACAAAGCTTAGACTAG

Coding sequence (CDS)

ATGAAAGAACTGACGAAAGCAATGTGCTGGGAACTTGTGTCAATTAACAAGGATACAGTAGATGAAGTTAGTGCAGCCATATATCGAAAACCTACCAATAATGATTGTTACGAACAGAGGTCCGAAAAAGAGCCACCTGTCTGCCCGAATTCAGATGATCCAAATGCAGCCTGGTACTTATCTGTTCTGATTTTAATTTCCCAAAAATCACAAAGCTTAGACTAG
BLAST of CmoCh07G008380 vs. Swiss-Prot
Match: PMTQ_ARATH (Probable methyltransferase PMT26 OS=Arabidopsis thaliana GN=At5g64030 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.8e-18
Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAW 59
           M EL K MCWELVSINKDT++ V  A YRKPT+N+CY+ RSE  PP+C +SDDPNA+W
Sbjct: 541 MSELIKKMCWELVSINKDTINGVGVATYRKPTSNECYKNRSEPVPPICADSDDPNASW 598

BLAST of CmoCh07G008380 vs. Swiss-Prot
Match: PMTP_ARATH (Probable methyltransferase PMT25 OS=Arabidopsis thaliana GN=At2g34300 PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 2.4e-17
Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAW 59
           M ELTKAMCW+LV+I KD ++EV AAIY+KPT+N CY +R + EPP+C +SDD NAAW
Sbjct: 483 MSELTKAMCWKLVTIKKDKLNEVGAAIYQKPTSNKCYNKRPQNEPPLCKDSDDQNAAW 540

BLAST of CmoCh07G008380 vs. Swiss-Prot
Match: PMTR_ARATH (Probable methyltransferase PMT27 OS=Arabidopsis thaliana GN=At3g51070 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.1e-17
Identity = 35/60 (58.33%), Postives = 48/60 (80.00%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAWYL 60
           M  LTK++CWELV+INKD ++ + AAIY+KP  N+CYE+R   +PP+C N+DD NAAWY+
Sbjct: 614 MSALTKSLCWELVTINKDKLNGIGAAIYQKPATNECYEKRKHNKPPLCKNNDDANAAWYV 673

BLAST of CmoCh07G008380 vs. Swiss-Prot
Match: PMTO_ARATH (Probable methyltransferase PMT24 OS=Arabidopsis thaliana GN=At1g29470 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.4e-17
Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAW 59
           M +LTKAMCWEL++I KD ++EV AAIY+KP +N CY +RS+ EPP+C +SDD NAAW
Sbjct: 483 MSKLTKAMCWELMTIKKDELNEVGAAIYQKPMSNKCYNERSQNEPPLCKDSDDQNAAW 540

BLAST of CmoCh07G008380 vs. Swiss-Prot
Match: PMTS_ARATH (Probable methyltransferase PMT28 OS=Arabidopsis thaliana GN=At1g19430 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 4.9e-10
Identity = 25/74 (33.78%), Postives = 47/74 (63.51%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAWYL 60
           M  LT ++CW +++   +   E+   IY+KP +ND YE R +K PP+C ++++P+AAWY+
Sbjct: 456 MTALTASICWNILAHKTEEASEMGVRIYQKPESNDIYELRRKKNPPLCEDNENPDAAWYV 515

Query: 61  SVLILISQKSQSLD 75
            +   I +   +++
Sbjct: 516 PMKTCIYEIPSAIE 529

BLAST of CmoCh07G008380 vs. TrEMBL
Match: A0A0A0KHL5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476050 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 6.0e-23
Identity = 51/58 (87.93%), Postives = 56/58 (96.55%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAW 59
           MKELTKAMCWEL+SINKDTV+ VSAAIYRKPTNNDCYEQR EKEPP+CP+SDDP+AAW
Sbjct: 542 MKELTKAMCWELISINKDTVNGVSAAIYRKPTNNDCYEQRYEKEPPLCPDSDDPSAAW 599

BLAST of CmoCh07G008380 vs. TrEMBL
Match: M5X2I6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001471mg PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-19
Identity = 44/58 (75.86%), Postives = 53/58 (91.38%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAW 59
           MKELTK++CWELVSINKDT++ V AAIYRKPT+N+CYE+RS+  PP+C NSDDPNAAW
Sbjct: 531 MKELTKSLCWELVSINKDTINGVGAAIYRKPTSNECYEKRSQSNPPLCGNSDDPNAAW 588

BLAST of CmoCh07G008380 vs. TrEMBL
Match: A0A0B2PPN3_GLYSO (Putative methyltransferase PMT26 OS=Glycine soja GN=glysoja_011897 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.0e-19
Identity = 43/62 (69.35%), Postives = 54/62 (87.10%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAWYL 60
           MK LTKAMCWE+VSI+KD V+ V  A+YRKPT+N+CYEQRS+ EPP+CP+SDDPNAAW +
Sbjct: 518 MKALTKAMCWEVVSISKDPVNGVGVAVYRKPTSNECYEQRSKNEPPLCPDSDDPNAAWNI 577

Query: 61  SV 63
            +
Sbjct: 578 QL 579

BLAST of CmoCh07G008380 vs. TrEMBL
Match: I1KBK8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G154800 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.0e-19
Identity = 43/62 (69.35%), Postives = 54/62 (87.10%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAWYL 60
           MK LTKAMCWE+VSI+KD V+ V  A+YRKPT+N+CYEQRS+ EPP+CP+SDDPNAAW +
Sbjct: 518 MKALTKAMCWEVVSISKDPVNGVGVAVYRKPTSNECYEQRSKNEPPLCPDSDDPNAAWNI 577

Query: 61  SV 63
            +
Sbjct: 578 QL 579

BLAST of CmoCh07G008380 vs. TrEMBL
Match: B9HEX5_POPTR (Dehydration-responsive family protein OS=Populus trichocarpa GN=POPTR_0007s04340g PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 8.9e-19
Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAW 59
           M ELTKAMCWELVSINKDT++ V  A YRKPT+NDCYE+RS++EPP+C  SDDPNAAW
Sbjct: 536 MTELTKAMCWELVSINKDTINGVGVATYRKPTSNDCYEKRSKQEPPLCEASDDPNAAW 593

BLAST of CmoCh07G008380 vs. TAIR10
Match: AT5G64030.1 (AT5G64030.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 1.6e-19
Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAW 59
           M EL K MCWELVSINKDT++ V  A YRKPT+N+CY+ RSE  PP+C +SDDPNA+W
Sbjct: 541 MSELIKKMCWELVSINKDTINGVGVATYRKPTSNECYKNRSEPVPPICADSDDPNASW 598

BLAST of CmoCh07G008380 vs. TAIR10
Match: AT2G34300.1 (AT2G34300.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 89.0 bits (219), Expect = 1.4e-18
Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAW 59
           M ELTKAMCW+LV+I KD ++EV AAIY+KPT+N CY +R + EPP+C +SDD NAAW
Sbjct: 483 MSELTKAMCWKLVTIKKDKLNEVGAAIYQKPTSNKCYNKRPQNEPPLCKDSDDQNAAW 540

BLAST of CmoCh07G008380 vs. TAIR10
Match: AT3G51070.1 (AT3G51070.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 88.2 bits (217), Expect = 2.3e-18
Identity = 35/60 (58.33%), Postives = 48/60 (80.00%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAWYL 60
           M  LTK++CWELV+INKD ++ + AAIY+KP  N+CYE+R   +PP+C N+DD NAAWY+
Sbjct: 614 MSALTKSLCWELVTINKDKLNGIGAAIYQKPATNECYEKRKHNKPPLCKNNDDANAAWYV 673

BLAST of CmoCh07G008380 vs. TAIR10
Match: AT1G29470.1 (AT1G29470.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 87.8 bits (216), Expect = 3.0e-18
Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAW 59
           M +LTKAMCWEL++I KD ++EV AAIY+KP +N CY +RS+ EPP+C +SDD NAAW
Sbjct: 483 MSKLTKAMCWELMTIKKDELNEVGAAIYQKPMSNKCYNERSQNEPPLCKDSDDQNAAW 540

BLAST of CmoCh07G008380 vs. TAIR10
Match: AT1G19430.1 (AT1G19430.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 64.7 bits (156), Expect = 2.7e-11
Identity = 25/74 (33.78%), Postives = 47/74 (63.51%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAWYL 60
           M  LT ++CW +++   +   E+   IY+KP +ND YE R +K PP+C ++++P+AAWY+
Sbjct: 456 MTALTASICWNILAHKTEEASEMGVRIYQKPESNDIYELRRKKNPPLCEDNENPDAAWYV 515

Query: 61  SVLILISQKSQSLD 75
            +   I +   +++
Sbjct: 516 PMKTCIYEIPSAIE 529

BLAST of CmoCh07G008380 vs. NCBI nr
Match: gi|659125365|ref|XP_008462649.1| (PREDICTED: probable methyltransferase PMT26 [Cucumis melo])

HSP 1 Score: 115.9 bits (289), Expect = 2.9e-23
Identity = 53/58 (91.38%), Postives = 56/58 (96.55%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAW 59
           MKELTKAMCWELVSINKDTV+ VSAAIYRKPTNNDCYEQRSEKEPP+CP+SDD NAAW
Sbjct: 534 MKELTKAMCWELVSINKDTVNGVSAAIYRKPTNNDCYEQRSEKEPPLCPDSDDSNAAW 591

BLAST of CmoCh07G008380 vs. NCBI nr
Match: gi|449451197|ref|XP_004143348.1| (PREDICTED: probable methyltransferase PMT26 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 8.6e-23
Identity = 51/58 (87.93%), Postives = 56/58 (96.55%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAW 59
           MKELTKAMCWEL+SINKDTV+ VSAAIYRKPTNNDCYEQR EKEPP+CP+SDDP+AAW
Sbjct: 542 MKELTKAMCWELISINKDTVNGVSAAIYRKPTNNDCYEQRYEKEPPLCPDSDDPSAAW 599

BLAST of CmoCh07G008380 vs. NCBI nr
Match: gi|645242149|ref|XP_008227415.1| (PREDICTED: probable methyltransferase PMT26 [Prunus mume])

HSP 1 Score: 105.1 bits (261), Expect = 5.2e-20
Identity = 44/58 (75.86%), Postives = 54/58 (93.10%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAW 59
           MKELTKA+CWELVSINKDT++ V AAIYRKPT+N+CYE+RS+ +PP+C N+DDPNAAW
Sbjct: 531 MKELTKALCWELVSINKDTINGVGAAIYRKPTSNECYEKRSQSDPPICANTDDPNAAW 588

BLAST of CmoCh07G008380 vs. NCBI nr
Match: gi|595913215|ref|XP_007214544.1| (hypothetical protein PRUPE_ppa001471mg [Prunus persica])

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-19
Identity = 44/58 (75.86%), Postives = 53/58 (91.38%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAW 59
           MKELTK++CWELVSINKDT++ V AAIYRKPT+N+CYE+RS+  PP+C NSDDPNAAW
Sbjct: 531 MKELTKSLCWELVSINKDTINGVGAAIYRKPTSNECYEKRSQSNPPLCGNSDDPNAAW 588

BLAST of CmoCh07G008380 vs. NCBI nr
Match: gi|734340985|gb|KHN09623.1| (Putative methyltransferase PMT26 [Glycine soja])

HSP 1 Score: 101.7 bits (252), Expect = 5.7e-19
Identity = 43/62 (69.35%), Postives = 54/62 (87.10%), Query Frame = 1

Query: 1   MKELTKAMCWELVSINKDTVDEVSAAIYRKPTNNDCYEQRSEKEPPVCPNSDDPNAAWYL 60
           MK LTKAMCWE+VSI+KD V+ V  A+YRKPT+N+CYEQRS+ EPP+CP+SDDPNAAW +
Sbjct: 518 MKALTKAMCWEVVSISKDPVNGVGVAVYRKPTSNECYEQRSKNEPPLCPDSDDPNAAWNI 577

Query: 61  SV 63
            +
Sbjct: 578 QL 579

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PMTQ_ARATH2.8e-1867.24Probable methyltransferase PMT26 OS=Arabidopsis thaliana GN=At5g64030 PE=2 SV=1[more]
PMTP_ARATH2.4e-1765.52Probable methyltransferase PMT25 OS=Arabidopsis thaliana GN=At2g34300 PE=2 SV=2[more]
PMTR_ARATH4.1e-1758.33Probable methyltransferase PMT27 OS=Arabidopsis thaliana GN=At3g51070 PE=3 SV=1[more]
PMTO_ARATH5.4e-1763.79Probable methyltransferase PMT24 OS=Arabidopsis thaliana GN=At1g29470 PE=2 SV=1[more]
PMTS_ARATH4.9e-1033.78Probable methyltransferase PMT28 OS=Arabidopsis thaliana GN=At1g19430 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KHL5_CUCSA6.0e-2387.93Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476050 PE=4 SV=1[more]
M5X2I6_PRUPE1.4e-1975.86Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001471mg PE=4 SV=1[more]
A0A0B2PPN3_GLYSO4.0e-1969.35Putative methyltransferase PMT26 OS=Glycine soja GN=glysoja_011897 PE=4 SV=1[more]
I1KBK8_SOYBN4.0e-1969.35Uncharacterized protein OS=Glycine max GN=GLYMA_06G154800 PE=4 SV=1[more]
B9HEX5_POPTR8.9e-1975.86Dehydration-responsive family protein OS=Populus trichocarpa GN=POPTR_0007s04340... [more]
Match NameE-valueIdentityDescription
AT5G64030.11.6e-1967.24 S-adenosyl-L-methionine-dependent methyltransferases superfamily pro... [more]
AT2G34300.11.4e-1865.52 S-adenosyl-L-methionine-dependent methyltransferases superfamily pro... [more]
AT3G51070.12.3e-1858.33 S-adenosyl-L-methionine-dependent methyltransferases superfamily pro... [more]
AT1G29470.13.0e-1863.79 S-adenosyl-L-methionine-dependent methyltransferases superfamily pro... [more]
AT1G19430.12.7e-1133.78 S-adenosyl-L-methionine-dependent methyltransferases superfamily pro... [more]
Match NameE-valueIdentityDescription
gi|659125365|ref|XP_008462649.1|2.9e-2391.38PREDICTED: probable methyltransferase PMT26 [Cucumis melo][more]
gi|449451197|ref|XP_004143348.1|8.6e-2387.93PREDICTED: probable methyltransferase PMT26 [Cucumis sativus][more]
gi|645242149|ref|XP_008227415.1|5.2e-2075.86PREDICTED: probable methyltransferase PMT26 [Prunus mume][more]
gi|595913215|ref|XP_007214544.1|2.0e-1975.86hypothetical protein PRUPE_ppa001471mg [Prunus persica][more]
gi|734340985|gb|KHN09623.1|5.7e-1969.35Putative methyltransferase PMT26 [Glycine soja][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004159Put_SAM_MeTrfase
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
cellular_component GO:0005768 endosome
cellular_component GO:0005802 trans-Golgi network
molecular_function GO:0008168 methyltransferase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G008380.1CmoCh07G008380.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004159Putative S-adenosyl-L-methionine-dependent methyltransferasePFAMPF03141Methyltransf_29coord: 1..68
score: 3.5

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G008380Cp4.1LG10g03570Cucurbita pepo (Zucchini)cmocpeB806
The following gene(s) are paralogous to this gene:

None