CmoCh07G008350 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G008350
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Descriptioncysteine-rich RLK (RECEPTOR-like protein kinase) 8
LocationCmo_Chr07 : 3913276 .. 3917801 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGTTCCGGGCGGTTGACGAGTCGGGCTTTGAGAAGATTGTCAGGGCAACTATTTCAAAAGAAGCGTCGGACACTTTAGAAAAGGTGTTCAAAGGAACTGACCGAGTCAAGCAAGTGCTTCTCCAAACTCTGTGTGGCGAGTTGGAGAGCATGAAGATGAAGGAGTCAGAAAATGTATCTGACCACATTGCGCACATACAGACCGTGGCAAATCAATTAAATCGAAACGGAGAAATGTTACCCGAGACGCGAGTTGTGGAGAAGATCTTGAGGTCGTTAACCGACAACTTCGAGAATGTTGTATGTGCGACAGAAGAGTCAAAGGACCTAGCGAAGTTCACAGTCAATGAGCTTGCCGGTTCTCTTAAGGCACACGAGCAACGTAAGAAAAAGAAGGAGGAGACACTCGATCAAGCGCTTCAGATTAAGGCATCAATAAAGGATGAAAAGGTACTCTACTCTCAAAATGTTTAAGCTAGAGGTCATGGAAGTTGTGGAAATGGTCGAGGTGGTCAAGGTAACAGTTATGAATAAAATTATGAGAAGCTACTATCGAAACAAGCAAATTGGCGTGGAAGAGGATGTAGTCGAGGAAGAGGCGACCAATCAAACATTCAGTGTTATAAATGTCAAAAATATGAAGTCTCATCAGAAAAGGACAAGCTGAGTTTGTCGCTCGAAAACAAGAAGAGGAAATTGAAGAAACCACTAGTGAGCTTGACAAAACAAAAACGGCGCATGTAGAATCATTGAATATAGCATTTAAATTTATGGGAGAGTTGTGTTGAAATAAGAGTTTTTGTTGGAATAAACTTAGTTGGGGAAAGATAGTTTTAATTTTTGTTAAGTTATGATTTTTTGAAATTGAATAGTTGAAAAAAAGCAAAAGAGAAAATGAAAGAATAATAACTATTTCAAGAACCGCAAGAACTGTATGAGAAATTGTGGTTTAGAAAATGATGGCATATGTAAATGTATAAATTAGTTTGTTTTCCATAGTAAAAAGTAGAGTGTCTCCTTGTCTCTCCCCTCTCGACATCTAGATTCATGAGTGTTATTTTAACAAATTAATATTAGAACGAGTTTTTTTGTTGAGATATAATATTTAGAGTATATATTATTTATGGAATATATCTTAGATATTATATTTTAATATTATTTGTTTTTTTATTTACAGTATATTTTATTTTATTCTCAATATTTAATTATTTTATATTTTTCTCATTTGTAGGCATTAATTGCTAGCTTGTATCCTATTTAAGCTTATGAATATCAATAAGAATATACAACTTCGATCTATTTCTATTTCTCATTCTTAACATGGTATTAGAGCACCGATCTTGGTATTCTTATATATCAAAATTTTCTCTATGGCGGAATCAGCCAAATCCAACTTCAAATTTTCGAATGTTGATTTAACACATTTTTATTATATTCATCACTCTAATCAGCTAGGATATTCACTTCGTTCCAATCAAATTAAATGGAACAAATTATCAATCCTCAAGTAAATCAGTTATGCATGCTCTTGTTGTCAAAAAGAAAATTGTCTTCATTGATGACACAATTGAAGAAATGTCTCAAGATGCAAATTCAAACGAATTTGAATTATGGAATCAGTGCAACAGTATGATAATATCTTGGTTAACTCATTTAGTTGAAGCAGATATCGCTGAAGGTATTATTCACGCCAAGACAGCTCATCAAGTGTGGGTTGATCTTCACGATCAATTCTCATAAAAGAATGCTCCAGCAAGTTTTCAGATACAAAAGACTATAGCAATGATGTCACAAGGAACCATGACGCTGTCAGTATATTTCACCAAACTCAAAGCACTCTGGGATGAATTGGAAGCATACCACACACCACTTACCTGTAATCAACGTCAAATACATGTTGATTAACGCGAAGAAGACAAGTTGATGCAACTACTCATGGGGCTCAATGAGTCTATAGTGAGATCTAACATATTGATGATGACTCCATTACCTAATGTGAGGCAAGCCTATTCATTACTTGTATAAGAAGAGATGCAGCGTCAGGTAACTTCTGAACCTACTAAGAATTTCTTGATTACATCAGCAGTGCAAAAGAAAACAACATATTCAAAGTTCGCCAAGGATAAATCATGTGAACACTGCAATAAAAGTGGTCATACAAGTGATGAGTGTCGATTCCTTAAGTTTCACTGTAAATTTTGCGATAGAATGGGACATACAGAAGATCGATGTCAACAGAAAAATAATTCTAGAAGAGCAGTACAAATCAATCAACGCAACAATCGAGGTATCGATCATCTGCAAATATGGCCGATGTTTCTCAGTTGAATACAGAAGAACAGTCACCAAATTTCATCCCAAATTTTTCTTATGATCAATTACAACATATTGTACAAGACTTATCTGCACTCAATCATCGTTCTTTTGGTAATTCTGATAATAACATCAATGTTGCAGGTTTGTTTCCAGTATCTGCATTATCTATTAACTCTATGAGTTCTAATCTATGGATTCTCGAAAGTGGAGCTACAGATCATATAGTATCCAAAGCTTCTGTTATGACTGAACCAAAGGCTACCACCATATCTACAATAAATTTGCCAAATGGAGGGACAGCACATGTGTCACATACTGACAATGTTTCTTTTAATCCTAACCTTAAATTAAACAATGTTTTATGTGTGCATTCATTCAATTTAAACCTAATGTTCATCAGCAAACTTACCAATGACTTGAAATGTTATGTGACTTTTTATCCTGATTCTTGTGTTATGCAGGACTTGGCTACGGGGAAGATGATTGGCTCGGGTAAACAATTCGGAGGTCTCTATCATATTTCTTTATCTTCTATCAAATCTTCAGCAAATCAAGTATCTCAGTCATCTCATTTGTGGCATTTACGCCTAGGTCATTCTTCTTCTTCTCGTTTTAAATTTCTAGCTCATCAATTGCATCTTAATAATGTTACTCTTTCTCATGATTGTAGTATTTGCTCATTAGCAAAACAAACTAGGTTGTCTTTTCAAAAATTCAATAACAACCCATTCTCCCTATGATATGCTACATTGTGATGTTTGAGGACCACATAAAATTCCAACCCATTCTGGTTTGCGGTTTTTTTCTCACTGTTGTTGATGATTTTACTCAATGTACTTGAGTTTTTCTTATGCAACACAAATCAGAAGTACACCATTTGTTAGTAAACTTTGTTAAATTCGTTCAAACTCAATTTCATGCAACTATCAAGATAGTTAGGTCAGACAATGGGAATGAGTTCCTATCTTTGCAACCATTTTTTACTTCTCGTGGCATTGAATTTCAGCGCACTTGTGTCTATACTCCACAACAAAATGGAGTCGTAGAACGTAAGCATCGTCATATCCTAAATGTAGCTAGGCCTCTTCTTTTTCTGTCACAGGTTCAACTTAATTTTTGGGGAGAATGCATTTTAACGGCTGTTTATCTTATAAATAGAACACATCACCATTGTTATCTAACAAAACACCCTTTGAAGCACTCTACAAACGACCACCTACATTTCACCATCTTAAAGTTTTTTGTTACAAGTGTTATGCAACTGTAGTACATCCTAAGCAAAAATTTGAACCTCGGGCAATTCCTTGTGTTTTCATAGGATATCCTTGTGGTCACAAAAGTTACAAGTTGTATGACATGCAATCTAAAAAATTCTTTATCAGTCGTGATGTTAAATTTTGTGACGATGATTTTCCGTTTTCATCAACTTCACAAACTTTGACATTAGCTCCTTCAACTCCCGTTTTACCATTTCATGATCCATCCTACCCAAACATCCATTCTAATCCTTCTATTCCTTCGTCGTCTCCTCCGCCTTCTATTCCTTCTCCAAATTCATAAGTTCCAGATTCACCCACTAAATCTAATCTTATCCCACTTGATACATCAGTTCCACTTCGACGTTCTACTTCTACCAAACGACCTCCAGCTTATTATAATGATAATGAGATGTCTTCTGGAGCCAATCATTTAACTCTAGCTCAAGTCCCAACTCTGGCACCAAGTATCCCCTTCATCATTACCTTTCATTCTCTCATTTTTCTTCTACTAAATGTGCTTTTCTAGCTCTTATTACAGCCTAGACAAAACCTAAAACCTATAATGAGGCAGTTGGCAACCCATTATGGCAGCAGGCTATGAATGATGAAATTGTAGCTTTGGAACATAATCATACTTGGTCTCTCGTTCCTCTACCACCTAGCCATAAAGCTATTGGTTGGTGTTGGGTGTACAAGATTAAACACAACTCTGATGGTTCTGTTGAACATTACAAAGCTCGACGGGTAGCAAAGGGATACACTCAGGTTGAAGGTGTTGATTACAAAGAGACATTTTCTCCTACAACGAAACTTACTACACTTCGTTACTTACTCACTATTGTCGTTGCTCGAAAATGGTTCACTCATCAATTGGATGTTCAAAATGCCTTTCTCCATGGTAATCTAGACGAGGAAGTTTATATGTCTTTACCACCAGGTATTCGCTGA

mRNA sequence

ATGCTGTTCCGGGCGGTTGACGAGTCGGGCTTTGAGAAGATTGTCAGGGCAACTATTTCAAAAGAAGCGTCGGACACTTTAGAAAAGGTGTTCAAAGGAACTGACCGAGTCAAGCAAGTGCTTCTCCAAACTCTGTGTGGCGAGTTGGAGAGCATGAAGATGAAGGAGTCAGAAAATGTATCTGACCACATTGCGCACATACAGACCGTGGCAAATCAATTAAATCGAAACGGAGAAATGTTACCCGAGACGCGAGTTGTGGAGAAGATCTTGAGGTCGTTAACCGACAACTTCGAGAATGTTGTATGTGCGACAGAAGAGTCAAAGGACCTAGCGAAGTTCACAGTCAATGAGCTTGCCGGTTCTCTTAAGGCACACGAGCAACGTAAGAAAAAGAAGGAGGAGACACTCGATCAAGCGCTTCAGATTAAGGCATCAATAAAGGATGAAAAGGACTTGGCTACGGGGAAGATGATTGGCTCGGGTAAACAATTCGGAGGTCTCTATCATATTTCTTTATCTTCTATCAAATCTTCAGCAAATCAAGTATCTCAGTCATCTCATTTGTGGCATTTACGCCTAGTTCCACTTCGACGTTCTACTTCTACCAAACGACCTCCAGCTTATTATAATGATAATGAGATGTCTTCTGGAGCCAATCATTTAACTCTAGCTCAAGTCCCAACTCTGGCACCAATTGGCAACCCATTATGGCAGCAGGCTATGAATGATGAAATTGTAGCTTTGGAACATAATCATACTTGGTCTCTCGTTCCTCTACCACCTAGCCATAAAGCTATTGGTTGGTGTTGGGTGTACAAGATTAAACACAACTCTGATGGTTCTGTTGAACATTACAAAGCTCGACGGGTAGCAAAGGGATACACTCAGGTTGAAGGTGTTGATTACAAAGAGACATTTTCTCCTACAACGAAACTTACTACACTTCGTTACTTACTCACTATTGTCGTTGCTCGAAAATGGTTCACTCATCAATTGGATGTTCAAAATGCCTTTCTCCATGGTAATCTAGACGAGGAAGTTTATATGTCTTTACCACCAGGTATTCGCTGA

Coding sequence (CDS)

ATGCTGTTCCGGGCGGTTGACGAGTCGGGCTTTGAGAAGATTGTCAGGGCAACTATTTCAAAAGAAGCGTCGGACACTTTAGAAAAGGTGTTCAAAGGAACTGACCGAGTCAAGCAAGTGCTTCTCCAAACTCTGTGTGGCGAGTTGGAGAGCATGAAGATGAAGGAGTCAGAAAATGTATCTGACCACATTGCGCACATACAGACCGTGGCAAATCAATTAAATCGAAACGGAGAAATGTTACCCGAGACGCGAGTTGTGGAGAAGATCTTGAGGTCGTTAACCGACAACTTCGAGAATGTTGTATGTGCGACAGAAGAGTCAAAGGACCTAGCGAAGTTCACAGTCAATGAGCTTGCCGGTTCTCTTAAGGCACACGAGCAACGTAAGAAAAAGAAGGAGGAGACACTCGATCAAGCGCTTCAGATTAAGGCATCAATAAAGGATGAAAAGGACTTGGCTACGGGGAAGATGATTGGCTCGGGTAAACAATTCGGAGGTCTCTATCATATTTCTTTATCTTCTATCAAATCTTCAGCAAATCAAGTATCTCAGTCATCTCATTTGTGGCATTTACGCCTAGTTCCACTTCGACGTTCTACTTCTACCAAACGACCTCCAGCTTATTATAATGATAATGAGATGTCTTCTGGAGCCAATCATTTAACTCTAGCTCAAGTCCCAACTCTGGCACCAATTGGCAACCCATTATGGCAGCAGGCTATGAATGATGAAATTGTAGCTTTGGAACATAATCATACTTGGTCTCTCGTTCCTCTACCACCTAGCCATAAAGCTATTGGTTGGTGTTGGGTGTACAAGATTAAACACAACTCTGATGGTTCTGTTGAACATTACAAAGCTCGACGGGTAGCAAAGGGATACACTCAGGTTGAAGGTGTTGATTACAAAGAGACATTTTCTCCTACAACGAAACTTACTACACTTCGTTACTTACTCACTATTGTCGTTGCTCGAAAATGGTTCACTCATCAATTGGATGTTCAAAATGCCTTTCTCCATGGTAATCTAGACGAGGAAGTTTATATGTCTTTACCACCAGGTATTCGCTGA
Homology
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BLAST of CmoCh07G008350 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 116.3 bits (290), Expect = 6.8e-25
Identity = 49/119 (41.18%), Postives = 81/119 (68.07%), Query Frame = 1 

Query: 238  WQQAMNDEIVALEHNHTWSLVPLPPSHKAIGWCWVYKIKHNSDGSVEHYKARRVAKGYTQ 297
            W++A+N E+ A + N+TW++   P +   +   WV+ +K+N  G+   YKAR VA+G+TQ
Sbjct: 906  WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965

Query: 298  VEGVDYKETFSPTTKLTTLRYLLTIVVARKWFTHQLDVQNAFLHGNLDEEVYMSLPPGI 357
               +DY+ETF+P  ++++ R++L++V+      HQ+DV+ AFL+G L EE+YM LP GI
Sbjct: 966  KYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI 1024

[Close]
BLAST of CmoCh07G008350 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.7e-23
Identity = 62/163 (38.04%), Postives = 94/163 (57.67%), Query Frame = 1 

Query: 196 PLRRSTSTKRPPAYYNDNE---MSSGANHLTLAQVPTLAPIGNPLWQQAMNDEIVALEHN 255
           PLRRS   +     Y   E   +S      +L +V +  P  N L  +AM +E+ +L+ N
Sbjct: 783 PLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLS-HPEKNQL-MKAMQEEMESLQKN 842

Query: 256 HTWSLVPLPPSHKAIGWCWVYKIKHNSDGSVEHYKARRVAKGYTQVEGVDYKETFSPTTK 315
            T+ LV LP   + +   WV+K+K + D  +  YKAR V KG+ Q +G+D+ E FSP  K
Sbjct: 843 GTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVK 902

Query: 316 LTTLRYLLTIVVARKWFTHQLDVQNAFLHGNLDEEVYMSLPPG 356
           +T++R +L++  +      QLDV+ AFLHG+L+EE+YM  P G
Sbjct: 903 MTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEG 943

[Close]
BLAST of CmoCh07G008350 vs. Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.6e-16
Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 1 

Query: 235 NPLWQQAMNDEIVALEHNHTWSLVPLPPSHKAIGWCWVYKIKHNSDGSVEHYKARRVAKG 294
           +P W QAM +E+ AL  N TW LVP P +   +G  WV+K K +SDG+++  KAR VAKG
Sbjct: 37  DPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKG 96

Query: 295 YTQVEGVDYKETFSPTTKLTTLRYLLTI 323
           + Q EG+ + ET+SP  +  T+R +L +
Sbjct: 97  FHQEEGIYFVETYSPVVRTATIRTILNV 124

[Close]
BLAST of CmoCh07G008350 vs. TrEMBL
Match: A0A059QBK0_PHAVU (Polyprotein OS=Phaseolus vulgaris PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.0e-51
Identity = 117/154 (75.97%), Postives = 131/154 (85.06%), Query Frame = 1 

Query: 1   MLFRAVDESGFEKIVRATISKEASDTLEKVFKGTDRVKQVLLQTLCGELESMKMKESENV 60
           ML+RAVDE+ FEKI  A+ SKEA D LEKVFKG DRVKQV LQTL GELE+MKM ESE+V
Sbjct: 73  MLYRAVDEAIFEKIAGASTSKEAWDILEKVFKGADRVKQVRLQTLRGELENMKMMESESV 132

Query: 61  SDHIAHIQTVANQLNRNGEMLPETRVVEKILRSLTDNFENVVCATEESKDLAKFTVNELA 120
           SD+I  +Q V NQLNRNGE L + RVVEKILR+LTDNFE++VCA EESKDLA  TV+ELA
Sbjct: 133 SDYITRVQAVVNQLNRNGETLTDARVVEKILRTLTDNFESIVCAIEESKDLATLTVDELA 192

Query: 121 GSLKAHEQR-KKKKEETLDQALQIKASIKDEKDL 154
           GSL+AHEQR KKKKEETL+QALQ KASIKDEK L
Sbjct: 193 GSLEAHEQRKKKKKEETLEQALQTKASIKDEKVL 226

[Close]
BLAST of CmoCh07G008350 vs. TrEMBL
Match: A0A151RCL3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_038469 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.3e-50
Identity = 114/154 (74.03%), Postives = 130/154 (84.42%), Query Frame = 1 

Query: 1   MLFRAVDESGFEKIVRATISKEASDTLEKVFKGTDRVKQVLLQTLCGELESMKMKESENV 60
           +L+RAVDESGFEKI RA+ SKEA D L KV++G D+VKQV LQTL GELE+MKMKESE V
Sbjct: 73  LLYRAVDESGFEKIARASTSKEAWDILAKVYRGADKVKQVCLQTLRGELENMKMKESEGV 132

Query: 61  SDHIAHIQTVANQLNRNGEMLPETRVVEKILRSLTDNFENVVCATEESKDLAKFTVNELA 120
           SD+I   QT+ NQLN+NGE L + RVVEKILRSLTD+FENV+CA EESKDL   TV+ELA
Sbjct: 133 SDYIIRFQTMVNQLNQNGETLTDVRVVEKILRSLTDSFENVICAIEESKDLTMITVDELA 192

Query: 121 GSLKAHEQRKKKK-EETLDQALQIKASIKDEKDL 154
            SL+AHEQRKKKK EE L+QALQIKASIKDEK L
Sbjct: 193 ESLEAHEQRKKKKEEEILEQALQIKASIKDEKAL 226

[Close]
BLAST of CmoCh07G008350 vs. TrEMBL
Match: A0A151S6I6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_027832 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.8e-47
Identity = 111/169 (65.68%), Postives = 132/169 (78.11%), Query Frame = 1 

Query: 1   MLFRAVDESGFEKIVRATISKEASDTLEKVFKGTDRVKQVLLQTLCGELESMKMKESENV 60
           +L+RAVDESGFEKI  A  SKEA D LEK  KG +RVKQV LQTL GELE+M+MKESE V
Sbjct: 73  LLYRAVDESGFEKIANAKSSKEAWDILEKAKKGDERVKQVRLQTLRGELENMRMKESEGV 132

Query: 61  SDHIAHIQTVANQLNRNGEMLPETRVVEKILRSLTDNFENVVCATEESKDLAKFTVNELA 120
           S+ I  ++TVAN+LNRNGE LP +RVVEKILRSLTD+FEN+VCA EESKDL+  TV EL 
Sbjct: 133 SEFITRVETVANKLNRNGENLPSSRVVEKILRSLTDDFENIVCAIEESKDLSTLTVEELT 192

Query: 121 GSLKAHEQRKKKKE---ETLDQALQIKASIKDEKDLATGKMIGSGKQFG 167
           GSL+A+EQRKK K+   E+L+QALQ KA+IK+EK L      G G+  G
Sbjct: 193 GSLEAYEQRKKNKKEKGESLEQALQAKATIKEEKVLYAQNNRGRGRGRG 241

[Close]
BLAST of CmoCh07G008350 vs. TrEMBL
Match: A0A151T3L7_CAJCA (Gag-Pol polyprotein OS=Cajanus cajan GN=KK1_016136 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.8e-47
Identity = 111/169 (65.68%), Postives = 131/169 (77.51%), Query Frame = 1 

Query: 1   MLFRAVDESGFEKIVRATISKEASDTLEKVFKGTDRVKQVLLQTLCGELESMKMKESENV 60
           +L+RAVDESGFEKI  A  SKEA D LEK  KG +RVKQV LQTL GELE+M+MKESE V
Sbjct: 48  LLYRAVDESGFEKIANAKSSKEAWDILEKAKKGDERVKQVRLQTLRGELENMRMKESEGV 107

Query: 61  SDHIAHIQTVANQLNRNGEMLPETRVVEKILRSLTDNFENVVCATEESKDLAKFTVNELA 120
           S+ I  ++TV N+LNRNGE LP +RVVEKILRSLTD+FEN+VCA EESKDL+  TV EL 
Sbjct: 108 SEFITRVETVVNKLNRNGENLPSSRVVEKILRSLTDDFENIVCAIEESKDLSTLTVEELT 167

Query: 121 GSLKAHEQRKKKKE---ETLDQALQIKASIKDEKDLATGKMIGSGKQFG 167
           GSL+A+EQRKK K+   E+L+QALQ KA+IKDEK L      G G+  G
Sbjct: 168 GSLEAYEQRKKNKKEKGESLEQALQAKATIKDEKVLYAQNNRGRGRGRG 216

[Close]
BLAST of CmoCh07G008350 vs. TrEMBL
Match: A0A151U6Q3_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_007702 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.5e-47
Identity = 113/170 (66.47%), Postives = 135/170 (79.41%), Query Frame = 1 

Query: 1   MLFRAVDESGFEKIVRATISKEASDTLEKVFKGTDRVKQVLLQTLCGELESMKMKESENV 60
           +L+RAVDESGFEKI  A  SKEA D LEK  KG +RVKQV LQTL GELE+M+MKESE V
Sbjct: 48  LLYRAVDESGFEKIANAKSSKEAWDILEKAKKGDERVKQVRLQTLRGELENMRMKESEGV 107

Query: 61  SDHIAHIQTVANQLNRNGEMLPETRVVEKILRSLTDNFENVVCATEESKDLAKFTVNELA 120
           S+ I  ++TVAN+LNRNGE LP +RVVEKILRSLTD+FEN+VCA EESKDL+  TV EL 
Sbjct: 108 SEFITRVETVANKLNRNGENLPSSRVVEKILRSLTDDFENIVCAIEESKDLSTLTVEELT 167

Query: 121 GSLKAHEQRKKKKE---ETLDQALQIKASIKDEKDLATGKMIGSGKQFGG 168
           GSL+A+EQRKK K+   E+L+QALQ KA+IK+EK  A G   G G+ +GG
Sbjct: 168 GSLEAYEQRKKNKKEKGESLEQALQAKATIKEEK--ARG---GRGQAWGG 212

[Close]
BLAST of CmoCh07G008350 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 157.5 bits (397), Expect = 1.5e-38
Identity = 71/119 (59.66%), Postives = 90/119 (75.63%), Query Frame = 1 

Query: 237 LWQQAMNDEIVALEHNHTWSLVPLPPSHKAIGWCWVYKIKHNSDGSVEHYKARRVAKGYT 296
           +W  AM+DEI A+E  HTW +  LPP+ K IG  WVYKIK+NSDG++E YKAR VAKGYT
Sbjct: 97  VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYT 156

Query: 297 QVEGVDYKETFSPTTKLTTLRYLLTIVVARKWFTHQLDVQNAFLHGNLDEEVYMSLPPG 356
           Q EG+D+ ETFSP  KLT+++ +L I     +  HQLD+ NAFL+G+LDEE+YM LPPG
Sbjct: 157 QQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPG 215

[Close]
BLAST of CmoCh07G008350 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-17
Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 1 

Query: 235 NPLWQQAMNDEIVALEHNHTWSLVPLPPSHKAIGWCWVYKIKHNSDGSVEHYKARRVAKG 294
           +P W QAM +E+ AL  N TW LVP P +   +G  WV+K K +SDG+++  KAR VAKG
Sbjct: 37  DPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKG 96

Query: 295 YTQVEGVDYKETFSPTTKLTTLRYLLTI 323
           + Q EG+ + ET+SP  +  T+R +L +
Sbjct: 97  FHQEEGIYFVETYSPVVRTATIRTILNV 124

[Close]
BLAST of CmoCh07G008350 vs. NCBI nr
Match: gi|545693870|gb|AGW47867.1| (polyprotein [Phaseolus vulgaris])

HSP 1 Score: 209.9 bits (533), Expect = 7.2e-51
Identity = 117/154 (75.97%), Postives = 131/154 (85.06%), Query Frame = 1 

Query: 1   MLFRAVDESGFEKIVRATISKEASDTLEKVFKGTDRVKQVLLQTLCGELESMKMKESENV 60
           ML+RAVDE+ FEKI  A+ SKEA D LEKVFKG DRVKQV LQTL GELE+MKM ESE+V
Sbjct: 73  MLYRAVDEAIFEKIAGASTSKEAWDILEKVFKGADRVKQVRLQTLRGELENMKMMESESV 132

Query: 61  SDHIAHIQTVANQLNRNGEMLPETRVVEKILRSLTDNFENVVCATEESKDLAKFTVNELA 120
           SD+I  +Q V NQLNRNGE L + RVVEKILR+LTDNFE++VCA EESKDLA  TV+ELA
Sbjct: 133 SDYITRVQAVVNQLNRNGETLTDARVVEKILRTLTDNFESIVCAIEESKDLATLTVDELA 192

Query: 121 GSLKAHEQR-KKKKEETLDQALQIKASIKDEKDL 154
           GSL+AHEQR KKKKEETL+QALQ KASIKDEK L
Sbjct: 193 GSLEAHEQRKKKKKEETLEQALQTKASIKDEKVL 226

[Close]
BLAST of CmoCh07G008350 vs. NCBI nr
Match: gi|1012328580|gb|KYP40213.1| (hypothetical protein KK1_038469 [Cajanus cajan])

HSP 1 Score: 207.2 bits (526), Expect = 4.7e-50
Identity = 114/154 (74.03%), Postives = 130/154 (84.42%), Query Frame = 1 

Query: 1   MLFRAVDESGFEKIVRATISKEASDTLEKVFKGTDRVKQVLLQTLCGELESMKMKESENV 60
           +L+RAVDESGFEKI RA+ SKEA D L KV++G D+VKQV LQTL GELE+MKMKESE V
Sbjct: 73  LLYRAVDESGFEKIARASTSKEAWDILAKVYRGADKVKQVCLQTLRGELENMKMKESEGV 132

Query: 61  SDHIAHIQTVANQLNRNGEMLPETRVVEKILRSLTDNFENVVCATEESKDLAKFTVNELA 120
           SD+I   QT+ NQLN+NGE L + RVVEKILRSLTD+FENV+CA EESKDL   TV+ELA
Sbjct: 133 SDYIIRFQTMVNQLNQNGETLTDVRVVEKILRSLTDSFENVICAIEESKDLTMITVDELA 192

Query: 121 GSLKAHEQRKKKK-EETLDQALQIKASIKDEKDL 154
            SL+AHEQRKKKK EE L+QALQIKASIKDEK L
Sbjct: 193 ESLEAHEQRKKKKEEEILEQALQIKASIKDEKAL 226

[Close]
BLAST of CmoCh07G008350 vs. NCBI nr
Match: gi|729325135|ref|XP_010534731.1| (PREDICTED: uncharacterized protein LOC104810237 [Tarenaya hassleriana])

HSP 1 Score: 198.7 bits (504), Expect = 1.7e-47
Identity = 106/152 (69.74%), Postives = 128/152 (84.21%), Query Frame = 1 

Query: 1   MLFRAVDESGFEKIVRATISKEASDTLEKVFKGTDRVKQVLLQTLCGELESMKMKESENV 60
           ++F+AVDE+ FEKI  AT SKEA +TL+KVFKG DRVKQV LQTL GELE+MKMKESE+V
Sbjct: 75  LMFQAVDEASFEKIAGATTSKEAWETLQKVFKGADRVKQVRLQTLRGELEAMKMKESEDV 134

Query: 61  SDHIAHIQTVANQLNRNGEMLPETRVVEKILRSLTDNFENVVCATEESKDLAKFTVNELA 120
           S +I+ +QTV NQL  NGE L + RVVEKILRSLTD+FENVVCA EESKDLAK T++EL 
Sbjct: 135 SSYISRVQTVVNQLKHNGETLDDARVVEKILRSLTDDFENVVCAIEESKDLAKITIDELT 194

Query: 121 GSLKAHEQR-KKKKEETLDQALQIKASIKDEK 152
           GSL+AHEQR KKKK++ +++ALQ K SI D+K
Sbjct: 195 GSLEAHEQRKKKKKQDVMEEALQTKMSINDDK 226

[Close]
BLAST of CmoCh07G008350 vs. NCBI nr
Match: gi|1012339123|gb|KYP50361.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 196.4 bits (498), Expect = 8.3e-47
Identity = 111/169 (65.68%), Postives = 132/169 (78.11%), Query Frame = 1 

Query: 1   MLFRAVDESGFEKIVRATISKEASDTLEKVFKGTDRVKQVLLQTLCGELESMKMKESENV 60
           +L+RAVDESGFEKI  A  SKEA D LEK  KG +RVKQV LQTL GELE+M+MKESE V
Sbjct: 73  LLYRAVDESGFEKIANAKSSKEAWDILEKAKKGDERVKQVRLQTLRGELENMRMKESEGV 132

Query: 61  SDHIAHIQTVANQLNRNGEMLPETRVVEKILRSLTDNFENVVCATEESKDLAKFTVNELA 120
           S+ I  ++TVAN+LNRNGE LP +RVVEKILRSLTD+FEN+VCA EESKDL+  TV EL 
Sbjct: 133 SEFITRVETVANKLNRNGENLPSSRVVEKILRSLTDDFENIVCAIEESKDLSTLTVEELT 192

Query: 121 GSLKAHEQRKKKKE---ETLDQALQIKASIKDEKDLATGKMIGSGKQFG 167
           GSL+A+EQRKK K+   E+L+QALQ KA+IK+EK L      G G+  G
Sbjct: 193 GSLEAYEQRKKNKKEKGESLEQALQAKATIKEEKVLYAQNNRGRGRGRG 241

[Close]
BLAST of CmoCh07G008350 vs. NCBI nr
Match: gi|1012350441|gb|KYP61630.1| (Gag-Pol polyprotein [Cajanus cajan])

HSP 1 Score: 196.4 bits (498), Expect = 8.3e-47
Identity = 111/169 (65.68%), Postives = 131/169 (77.51%), Query Frame = 1 

Query: 1   MLFRAVDESGFEKIVRATISKEASDTLEKVFKGTDRVKQVLLQTLCGELESMKMKESENV 60
           +L+RAVDESGFEKI  A  SKEA D LEK  KG +RVKQV LQTL GELE+M+MKESE V
Sbjct: 48  LLYRAVDESGFEKIANAKSSKEAWDILEKAKKGDERVKQVRLQTLRGELENMRMKESEGV 107

Query: 61  SDHIAHIQTVANQLNRNGEMLPETRVVEKILRSLTDNFENVVCATEESKDLAKFTVNELA 120
           S+ I  ++TV N+LNRNGE LP +RVVEKILRSLTD+FEN+VCA EESKDL+  TV EL 
Sbjct: 108 SEFITRVETVVNKLNRNGENLPSSRVVEKILRSLTDDFENIVCAIEESKDLSTLTVEELT 167

Query: 121 GSLKAHEQRKKKKE---ETLDQALQIKASIKDEKDLATGKMIGSGKQFG 167
           GSL+A+EQRKK K+   E+L+QALQ KA+IKDEK L      G G+  G
Sbjct: 168 GSLEAYEQRKKNKKEKGESLEQALQAKATIKDEKVLYAQNNRGRGRGRG 216

The following BLAST results are available for this feature:
BLAST of CmoCh07G008350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COPIA_DROME6.8e-2541.18Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
POLX_TOBAC3.7e-2338.04Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
M820_ARATH2.6e-1645.45Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg0... [more]
BLAST of CmoCh07G008350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A059QBK0_PHAVU5.0e-5175.97Polyprotein OS=Phaseolus vulgaris PE=4 SV=1[more]
A0A151RCL3_CAJCA3.3e-5074.03Uncharacterized protein OS=Cajanus cajan GN=KK1_038469 PE=4 SV=1[more]
A0A151S6I6_CAJCA5.8e-4765.68Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=... [more]
A0A151T3L7_CAJCA5.8e-4765.68Gag-Pol polyprotein OS=Cajanus cajan GN=KK1_016136 PE=4 SV=1[more]
A0A151U6Q3_CAJCA7.5e-4766.47Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=... [more]
BLAST of CmoCh07G008350 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23160.11.5e-3859.66 cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00820.11.5e-1745.45ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)[more]
BLAST of CmoCh07G008350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|545693870|gb|AGW47867.1|7.2e-5175.97polyprotein [Phaseolus vulgaris][more]
gi|1012328580|gb|KYP40213.1|4.7e-5074.03hypothetical protein KK1_038469 [Cajanus cajan][more]
gi|729325135|ref|XP_010534731.1|1.7e-4769.74PREDICTED: uncharacterized protein LOC104810237 [Tarenaya hassleriana][more]
gi|1012339123|gb|KYP50361.1|8.3e-4765.68Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan][more]
gi|1012350441|gb|KYP61630.1|8.3e-4765.68Gag-Pol polyprotein [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G008350.1CmoCh07G008350.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 252..356
score: 7.0
NoneNo IPR availableunknownCoilCoilcoord: 116..150
scor
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..355
score: 8.8
NoneNo IPR availablePANTHERPTHR11439:SF185SUBFAMILY NOT NAMEDcoord: 1..355
score: 8.8
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 2..133
score: 9.1

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G008350Cucurbita moschata (Rifu)cmocmoB455
CmoCh07G008350Cucurbita maxima (Rimu)cmacmoB667
CmoCh07G008350Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G008350Wild cucumber (PI 183967)cmocpiB873
CmoCh07G008350Watermelon (Charleston Gray)cmowcgB755
CmoCh07G008350Cucumber (Chinese Long) v2cmocuB865
CmoCh07G008350Melon (DHL92) v3.5.1cmomeB783
CmoCh07G008350Watermelon (97103) v1cmowmB814
CmoCh07G008350Cucurbita pepo (Zucchini)cmocpeB806
CmoCh07G008350Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G008350Bottle gourd (USVL1VR-Ls)cmolsiB774
CmoCh07G008350Cucumber (Gy14) v2cgybcmoB843
CmoCh07G008350Silver-seed gourdcarcmoB0338
CmoCh07G008350Silver-seed gourdcarcmoB1100
CmoCh07G008350Watermelon (97103) v2cmowmbB849
CmoCh07G008350Wax gourdcmowgoB1066