CmoCh07G006320 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACTCTCTTACTACTCAATATCCTCCTACCATCGACCGCTAAAATTATGACCCTTTCTATTTCCCACTTGCATTTCTCCTTTCTCCCTCCCGTTGGATGCAGCTAAGCTCAATAACTATTAAAACCCAAAAAAAGGAAAAATCATTTTCAGATCCAAGATCTGGACTTCCAACACTAATTGCTGCTGCCTTCCTTCTTCTCTCATCTGATCTGAGGTGGGTTTTCCAGATCCATCAAGTTTCCTTACCTGTGTTGCTTTGTGTTTGTTTTTCGTTTCCTTTATCCATTATTTTAGCTCAATTTCTGTAGTTTCTTCAGAACTTGAAAGGATTCTGCTGCCTTTTGTTTCTATTATTTCTTCTAAAAAAATGTTTCTTGGTTCTGGGGTGGGAGACATCGACCCACAATGCTGCATTATATCTATCTATGTGCTTCTTTCAGTTACCTGTATGACATTGCATTGTTTTGCCCGGATGGTGTTTATGTTTTTTCTTTTTCTTCCCTAAATTTGCTTATTTTGTGTTAACTTTCTCGGATTTATTTTCTGGGTATTATGCCTCTGTAGTTATTGGTTATGAAGACCGTAGATGATGCTTCATCAACCTTCAATGGGTTTTTTTTTATTCGATTCCTTTTCACCCTTTGTTTTGGTGCAAGAATAAACACCCTTTCACTGCGAATTGGAGAACTTTTTTGTAATCGCCTAATGGTGTTGGAGACTTTTCTAATCCCGTTATTTCATTTATCAATGAAATCTGTTTCTCTTCTCGAAAAAGAAATAGATGATGAATTGGGAAACAGTTTGAGCTGTTCAGTTTGTGTTGTTTGCTGATTTAGTTGAGGAAGTTCACTCTTGAAACTTTCATAAGCATTTCTCTTTTGATTTACTAGATTGTATTGGGTTGGGGTGTTGCATGTGGGGGATGCATAGACATGAGTGGCCACAGACATATAGTGTCGGTGACTCTCTGTAACAAGCTGCTACAAGCAAGCAATTGATTTTACGAACTGATATGCACATTTTGGAATGAGTTCTGGTTCCATGTACACGTATTTGTCTATTTGATGGAAATGCAATCTAACTATCACTTGTTTCTATGCTTTCATCAAATGTAGGATCATATTCTTTTGAACTATCAATCATGCAAAGGAGGCAGCCTACTACCACACGCCGCAATGGAAGCTTTCCATTTGCTGGGGCCCTGAATTCCAAATCAAAATCATCTCCCTTGTTATCTATATGCCTTGTCCTTTTGGTAATTATCATGATGGATAATCAATTTCCTTGATCTGTTTTATATTCCCCATCATTTTCTCTAGATTATTGCGGTGGGTGGATGATAATCCTAATTTCCATAGTACTTTTACCACCCAATAGAATATAGTCCATATAGTCGTTATTTGAATTTTGACGATTTTCTTTTTTTGGTTTTTCTCAGGGCGCTGTTCTTCTACTTGTCTATGCTTTTAGTGGCCCAGGTTTGCATTTGATTAACATTTCTAGATTTCCTATTACATGATAGATACGATCGTTAGTATTCCTACCAAATATGTTAGCGTCATTTTTCCCTCCAAGTAGTTTGGGCTAGTATGCTTTGTTTATAGTCGAAGAAATGAACAATGGGGTTTATTGCCTCATTCATTGAACCCTTATAATGCAGGTTTATTTGGAGGCACCAAGATAGTCAGCAAGATTGAAGGTAAAGTAAGATTTCTTTTTGTAACGTCCTTGTCGTTGAGTGAGCAGGTTATCTCCTTCCTTATTACCCTTTTCATGTAATGATTTAGGTTTCTTATTGAAAAAAGTAATGAAGGTAAAGTTTCCAGGAATCTACATAGATCAATTACAAAAAGAGCCTGATAGAACACTCCAAGAAGATGCATGAAATCTTGCTATATTTACTCTCTCTTTCCATGCAATGCTTTTGCCTTCGAAAATTCTTTGATTTCTTTCACTTCACAGTTTTCCAGCATTGATTGCATTGACCTACAAAATTTTAACATTGATTTTAAATATTTGCATTGCTAGCAATTGATAGATATTTTCTTTTGGGTAAGATCGAAGATCCGAGAACATCTAAAGAGGTAAAAAAAATTCCTCCCAACATTTGGAACTATATGAACAATGAAAGAAAAGAAAGCTTCAACCTTCCTTGCTTGCAAACAGAGCACACAAGAACTTAACAGTAGCTATGATACTTTCTTTGTACTTTATCAGCCATGTCTGAGCCAACCAAAGGAAGAATGCATGTTAAGACATTTACTCTTTTTAGACATTTCATCTTCCATACAGCCTTTGATAGGTCCCTTGGGATCAATCAAAGATGAAGGTGTGACTTCTTTGACAGGGAAATGACCTAAGGACCCAAATTTCCAAAGTCTACTATCTTTCCTCCAAGGATTATGGATTCCATGTAAAAAAATTTATTGCACCTGGATAATTTTGCAATTTTATGCAGTTTGTTTTCCTCCATGTCTTGGTTTATTGGGGACAGATGATGTCACATTTATATTTCTTGCATTGGTGCTTGGTTTACTTGTAACTATTTTGCATTTTAAAGGTTGTAAAATATTTATGAATTTCATATGATGGGTTGATGATCTCAATCAATTTTAATTACTATACGCAAATGCTTCAATTGTAGTGTATACCGATTTAATGGTTTCATTCTGATGATGGTTCTATAAGATTTGATTGCTTCTATGAGCATTTTCTGTGAGCATTAGTTTAGTTGACTGAGGTGGTATTTAAACACATAGATCAAAATTGAACCTGTAGGTGATTTTTCGTGTACATTGGAGTTGCAAAGAGCAATTCCCATATTAAAGAAAGCATATGGCGATAGCATGCGCAAAGTTTTGCATGTTGGTCCCGATACCTGCTCTGTGGTATCTAAGCTGTTGAAAGAAGGCGAAACAGAAGCCTGGGGCATAGAACCATACGACATAGAGGATGCTGATAGAAACTGCAAATCACTTGTGAACAAAGGCATTGTACGCGTGGCAGATATCAAGTTCCCTCTACCCTATAGGGCAAAGTCCTTTTCACACGTTATTGTGTCAGATGCATTGGATTACCTATCCCCCAAATACCTGAACAAAACACTTCCAGAATTTGCAAGGGTTTCTGCTGATGGTCTTATTATATTTACTGGTAACTTTTTCATATCCCTAGCAACATCGTTAAGATTTATTTCCATTGCATGATAATTTCACTACCAAGAACCTTGTGTTTTTCTTCATTGGAAACTACTTTTTGAAATGTATTTGCTGGCACTTCGGAAACTCCACAATCTTGCGGTGAATGTCCTCAATGAATGTTGGATGCTCTGCTCCTACTAAATGTACAAGTTGGGTAGAGAGGATTTGAATCTAGGATGGAAACTTAAGACAACTAGAATTTAACAGTTGAGCCATTATTGTGGGTTAGAATTACTTCGTTTCGAGATAAAAGCAGCTATTATTGTTGCAAGCTTCTACTTTTGATCTTTTCTTGACCCCCCCCTAGGAACCAATTGGAGGGTTCCTCTCAGCGGATTGTCGTTATAACAATCATATCACATGGATAGTAAATCTTATCACTACATTGTGGATACATAGAAACATCTCATAGTATTAGGAGTTCTCTTTGTTGCATATCCTGTTTTTCCATTTGATAAAGATCCGTGACCTTTTACTGTCTCCTTTTCTTATCTAGGTTCCCCTGGTCAGCAGAAAGCAAAAGTAAACGAGTTAACGAAGTTTGGACGGCCGGTAAGCTACTATAATTACGCCTTGTCATCTGGATCTTGTGTGTGCCATTTTAATTGGATATCCTCACGCATAATGTTTGTGTTTTTTCACTTAAAATTGTAAACAATATGGATAATATGTGAATTCGCTGGCCTAATTGCTCGTGGCACTATAATACGAAAGGGTGAGTTCTTAAGCAATTGTTTTAACTCACATGGCTTCTAGAACAGTGTTTCTGACTTAAATGATCGAACAAGAAATTCAAAGGGGTAAAGTAAAAACTAATGAATAGTGTATTAAAGAGGTTTATGTCTGCTGAATGCTTTAAGCTTAGATACCTTTGTGGAGTGAATATCTGGAGATCGAAAGCCCCACCATATAATAGCAATTGAATATCTTGATTCAGTCTGAAATTGGATGAATTAAGGCCGTAAATATTTAGCATATGATTTACGTGGTGTACTAAGACAGGTTTTAATTCTTTTATAAGAAATAATATGGTTGTGATTTCATTAATGTAATGGATATATTTTACTTCATTTTTGAAGGCGAAAATGCGGAGCTCGTCTTGGTGGATTCGATTTTTTGTCCAAACAAGCTTAGAAGAGGACGAGGCGTCTGCCAAGAAATTTAAGCAAGCAGCATCCAAGCAGTCTTACAAGCCTGCCTGCCAAGTTTTCCATCTCAATTCATACCATTGA ACTCTCTTACTACTCAATATCCTCCTACCATCGACCGCTAAAATTATGACCCTTTCTATTTCCCACTTGCATTTCTCCTTTCTCCCTCCCGTTGGATGCAGCTAAGCTCAATAACTATTAAAACCCAAAAAAAGGAAAAATCATTTTCAGATCCAAGATCTGGACTTCCAACACTAATTGCTGCTGCCTTCCTTCTTCTCTCATCTGATCTGAGGATCATATTCTTTTGAACTATCAATCATGCAAAGGAGGCAGCCTACTACCACACGCCGCAATGGAAGCTTTCCATTTGCTGGGGCCCTGAATTCCAAATCAAAATCATCTCCCTTGTTATCTATATGCCTTGTCCTTTTGGGCGCTGTTCTTCTACTTGTCTATGCTTTTAGTGGCCCAGGTTTATTTGGAGGCACCAAGATAGTCAGCAAGATTGAAGGTGATTTTTCGTGTACATTGGAGTTGCAAAGAGCAATTCCCATATTAAAGAAAGCATATGGCGATAGCATGCGCAAAGTTTTGCATGTTGGTCCCGATACCTGCTCTGTGGTATCTAAGCTGTTGAAAGAAGGCGAAACAGAAGCCTGGGGCATAGAACCATACGACATAGAGGATGCTGATAGAAACTGCAAATCACTTGTGAACAAAGGCATTGTACGCGTGGCAGATATCAAGTTCCCTCTACCCTATAGGGCAAAGTCCTTTTCACACGTTATTGTGTCAGATGCATTGGATTACCTATCCCCCAAATACCTGAACAAAACACTTCCAGAATTTGCAAGGGTTTCTGCTGATGGTCTTATTATATTTACTGGTTCCCCTGGTCAGCAGAAAGCAAAAGTAAACGAGTTAACGAAGTTTGGACGGCCGGCGAAAATGCGGAGCTCGTCTTGGTGGATTCGATTTTTTGTCCAAACAAGCTTAGAAGAGGACGAGGCGTCTGCCAAGAAATTTAAGCAAGCAGCATCCAAGCAGTCTTACAAGCCTGCCTGCCAAGTTTTCCATCTCAATTCATACCATTGA ATGCAAAGGAGGCAGCCTACTACCACACGCCGCAATGGAAGCTTTCCATTTGCTGGGGCCCTGAATTCCAAATCAAAATCATCTCCCTTGTTATCTATATGCCTTGTCCTTTTGGGCGCTGTTCTTCTACTTGTCTATGCTTTTAGTGGCCCAGGTTTATTTGGAGGCACCAAGATAGTCAGCAAGATTGAAGGTGATTTTTCGTGTACATTGGAGTTGCAAAGAGCAATTCCCATATTAAAGAAAGCATATGGCGATAGCATGCGCAAAGTTTTGCATGTTGGTCCCGATACCTGCTCTGTGGTATCTAAGCTGTTGAAAGAAGGCGAAACAGAAGCCTGGGGCATAGAACCATACGACATAGAGGATGCTGATAGAAACTGCAAATCACTTGTGAACAAAGGCATTGTACGCGTGGCAGATATCAAGTTCCCTCTACCCTATAGGGCAAAGTCCTTTTCACACGTTATTGTGTCAGATGCATTGGATTACCTATCCCCCAAATACCTGAACAAAACACTTCCAGAATTTGCAAGGGTTTCTGCTGATGGTCTTATTATATTTACTGGTTCCCCTGGTCAGCAGAAAGCAAAAGTAAACGAGTTAACGAAGTTTGGACGGCCGGCGAAAATGCGGAGCTCGTCTTGGTGGATTCGATTTTTTGTCCAAACAAGCTTAGAAGAGGACGAGGCGTCTGCCAAGAAATTTAAGCAAGCAGCATCCAAGCAGTCTTACAAGCCTGCCTGCCAAGTTTTCCATCTCAATTCATACCATTGA
BLAST of CmoCh07G006320 vs. Swiss-Prot
Match: Y3972_ARATH (Uncharacterized protein At3g49720 OS=Arabidopsis thaliana GN=At3g49720 PE=2 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 4.1e-112 Identity = 199/261 (76.25%), Postives = 228/261 (87.36%), Query Frame = 1
BLAST of CmoCh07G006320 vs. TrEMBL
Match: A0A0A0KX27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G630200 PE=4 SV=1) HSP 1 Score: 495.0 bits (1273), Expect = 5.7e-137 Identity = 242/258 (93.80%), Postives = 254/258 (98.45%), Query Frame = 1
BLAST of CmoCh07G006320 vs. TrEMBL
Match: A0A0A0KLK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G496440 PE=4 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 1.9e-132 Identity = 238/258 (92.25%), Postives = 250/258 (96.90%), Query Frame = 1
BLAST of CmoCh07G006320 vs. TrEMBL
Match: A0A067K7A2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12582 PE=4 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 1.5e-113 Identity = 205/262 (78.24%), Postives = 234/262 (89.31%), Query Frame = 1
BLAST of CmoCh07G006320 vs. TrEMBL
Match: M5WCE1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010197mg PE=4 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 2.4e-111 Identity = 196/259 (75.68%), Postives = 231/259 (89.19%), Query Frame = 1
BLAST of CmoCh07G006320 vs. TrEMBL
Match: A0A061DIR4_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_000855 PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 4.1e-111 Identity = 205/261 (78.54%), Postives = 234/261 (89.66%), Query Frame = 1
BLAST of CmoCh07G006320 vs. TAIR10
Match: AT3G49720.1 (AT3G49720.1 unknown protein) HSP 1 Score: 405.6 bits (1041), Expect = 2.3e-113 Identity = 199/261 (76.25%), Postives = 228/261 (87.36%), Query Frame = 1
BLAST of CmoCh07G006320 vs. TAIR10
Match: AT5G65810.1 (AT5G65810.1 unknown protein) HSP 1 Score: 403.7 bits (1036), Expect = 8.7e-113 Identity = 194/258 (75.19%), Postives = 226/258 (87.60%), Query Frame = 1
BLAST of CmoCh07G006320 vs. NCBI nr
Match: gi|659130228|ref|XP_008465059.1| (PREDICTED: uncharacterized protein At3g49720-like [Cucumis melo]) HSP 1 Score: 500.0 bits (1286), Expect = 2.5e-138 Identity = 245/258 (94.96%), Postives = 255/258 (98.84%), Query Frame = 1
BLAST of CmoCh07G006320 vs. NCBI nr
Match: gi|449449222|ref|XP_004142364.1| (PREDICTED: uncharacterized protein At3g49720-like [Cucumis sativus]) HSP 1 Score: 495.0 bits (1273), Expect = 8.1e-137 Identity = 242/258 (93.80%), Postives = 254/258 (98.45%), Query Frame = 1
BLAST of CmoCh07G006320 vs. NCBI nr
Match: gi|659079773|ref|XP_008440436.1| (PREDICTED: uncharacterized protein At3g49720 [Cucumis melo]) HSP 1 Score: 493.8 bits (1270), Expect = 1.8e-136 Identity = 243/258 (94.19%), Postives = 255/258 (98.84%), Query Frame = 1
BLAST of CmoCh07G006320 vs. NCBI nr
Match: gi|778718793|ref|XP_004143414.2| (PREDICTED: uncharacterized protein At3g49720 [Cucumis sativus]) HSP 1 Score: 479.9 bits (1234), Expect = 2.7e-132 Identity = 238/258 (92.25%), Postives = 250/258 (96.90%), Query Frame = 1
BLAST of CmoCh07G006320 vs. NCBI nr
Match: gi|731438993|ref|XP_002268715.2| (PREDICTED: uncharacterized protein At3g49720 [Vitis vinifera]) HSP 1 Score: 421.4 bits (1082), Expect = 1.1e-114 Identity = 213/262 (81.30%), Postives = 234/262 (89.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |