CmoCh07G004400 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G004400
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	B-box zinc finger family protein
Location	Cmo_Chr07 : 2026405 .. 2027869 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGACTATCTCTCTCTCTCTCTGTCTATTGTCATCGGTCGGCATTATTTGTTATATAACCTAAAGACTGCAGTGGCCGACACCAAGAACATCAGATATCAGGAACAGGGGGACGACCAAAATGAAATTTTGAAGGCACCCTTTTCAGGTTTTGATCGAGTTATGTGTTTTTTATGAAGTTTAGGAGGTGGGTTTTTGAGATTGATCGTAAAGTTTCCATCTTTTTAATGGTTTATTTTGTGAGTGGCAATGAGTGATCGGCTTTGATGAGGATACTTTGTGATTCCTGTGAAAATGCTGCAGCGACCTTGTTCTGTGCAGCTGATGAGGCTGCTCTTTGTGCAGCATGTGATGTCAAGGTATATATATATATAAAACCAAGTGCTTATATTACCTTTAGTTTTATGTCTTGTGATTTGGAAGGCTTCAGTTCACGTTGATGGGCAGGTGCACATGTGCAATAAGCTTGCGAGCCGCCATGTAAGGGTTGGGCTCGCAAGTCCGAGCGAAGTTTCCTGCTGTGATATATGTGAAAATGCACCAGGTATACGTATAATCATGAAGTCTTTTGGTCTTGTTTTTGTTTGAGGGTTAACATTCTGAAGGAAAATGTTTGCAGCTTTCTTTTACTGTGAGATAGATGGAAGCTCCTTGTGCTTACAATGCGACGTGGTTGTTCATGTGGGAGGCAAGAGAATGCACAAGAGATATCTTCGGCTGGGGCAGAGAGTTGAGGTATTAATCCTACATGTGAAACCCTTAAATCTCTCAAGACCTTAACGTATTTGATTCTGTTTTGGTTAATTTTGCAGTTTCCTGGGGATAAACAAAATGATCCAAAGGACTTGAATGTACAAGCGATGGAACAGGTTGAGACAGTGAGAGGGCAGAATCAAGATGGGGTTGATTCAAATGGAGATGGGCATTCCAAGCGGGGGAACGAAGTGATTGATTTGAACATGTAGATCTAATTAGGAACTTGTTGTAACTCAGCCAAATCCAAAGCCGAGATCTGATGGCCTGAACAAGGTAATAAGAACAGTATAATATTTATATACAAATCAATAATTATGTACACCATTCATGCTGTCCATGAAAATTTCTACTGGAGTGTTTTGTGCTGCTTCCATACAGGGTGAGACTATACATAAACAAGCTGTACCCAAATCAGATAATCCACATAACCAAACCAGCGCTGGAGACTGAACCTTATCCAAAGCGTACTTAACTTTCTTTAAACAACCATTACAAATTGAACAAGAGTAAGAACCAATCTTCCTAATTCCATGATTGGCTTGGAGCAAACTGACGTGAGGGCAGGCAGCAAGGGCGCGCATACATCATGACTTGAAGAGAGTAACTGTGGCGATGTAACCATTTTTCATTACCTGCTCATGGCATTCATTAACACACCGCCTTAATAAATAACACAATCAACTCATAATGTATGTACTCAATAGAAGAGGG

mRNA sequence

TGACTATCTCTCTCTCTCTCTGTCTATTGTCATCGGTCGGCATTATTTGTTATATAACCTAAAGACTGCAGTGGCCGACACCAAGAACATCAGATATCAGGAACAGGGGGACGACCAAAATGAAATTTTGAAGGCACCCTTTTCAGGTTTTGATCGAGTTATGTGTTTTTTATGAAGTTTAGGAGGTGGGTTTTTGAGATTGATCGTAAAGTTTCCATCTTTTTAATGGTTTATTTTGTGAGTGGCAATGAGTGATCGGCTTTGATGAGGATACTTTGTGATTCCTGTGAAAATGCTGCAGCGACCTTGTTCTGTGCAGCTGATGAGGCTGCTCTTTGTGCAGCATGTGATGTCAAGGTGCACATGTGCAATAAGCTTGCGAGCCGCCATGTAAGGGTTGGGCTCGCAAGTCCGAGCGAAGTTTCCTGCTGTGATATATGTGAAAATGCACCAGCTTTCTTTTACTGTGAGATAGATGGAAGCTCCTTGTGCTTACAATGCGACGTGGTTGTTCATGTGGGAGGCAAGAGAATGCACAAGAGATATCTTCGGCTGGGGCAGAGAGTTGAGTTTCCTGGGGATAAACAAAATGATCCAAAGGACTTGAATGTACAAGCGATGGAACAGGTTGAGACAGTGAGAGGGCAGAATCAAGATGGGGTTGATTCAAATGGAGATGGGCATTCCAAGCGGGGGAACGAAGTGATTGATTTGAACATGTAGATCTAATTAGGAACTTGTTGTAACTCAGCCAAATCCAAAGCCGAGATCTGATGGCCTGAACAAGGGTGAGACTATACATAAACAAGCTGTACCCAAATCAGATAATCCACATAACCAAACCAGCGCTGGAGACTGAACCTTATCCAAAGCGTACTTAACTTTCTTTAAACAACCATTACAAATTGAACAAGAGTAAGAACCAATCTTCCTAATTCCATGATTGGCTTGGAGCAAACTGACGTGAGGGCAGGCAGCAAGGGCGCGCATACATCATGACTTGAAGAGAGTAACTGTGGCGATGTAACCATTTTTCATTACCTGCTCATGGCATTCATTAACACACCGCCTTAATAAATAACACAATCAACTCATAATGTATGTACTCAATAGAAGAGGG

Coding sequence (CDS)

ATGAGGATACTTTGTGATTCCTGTGAAAATGCTGCAGCGACCTTGTTCTGTGCAGCTGATGAGGCTGCTCTTTGTGCAGCATGTGATGTCAAGGTGCACATGTGCAATAAGCTTGCGAGCCGCCATGTAAGGGTTGGGCTCGCAAGTCCGAGCGAAGTTTCCTGCTGTGATATATGTGAAAATGCACCAGCTTTCTTTTACTGTGAGATAGATGGAAGCTCCTTGTGCTTACAATGCGACGTGGTTGTTCATGTGGGAGGCAAGAGAATGCACAAGAGATATCTTCGGCTGGGGCAGAGAGTTGAGTTTCCTGGGGATAAACAAAATGATCCAAAGGACTTGAATGTACAAGCGATGGAACAGGTTGAGACAGTGAGAGGGCAGAATCAAGATGGGGTTGATTCAAATGGAGATGGGCATTCCAAGCGGGGGAACGAAGTGATTGATTTGAACATGTAG

Homology

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BLAST of CmoCh07G004400 vs. Swiss-Prot
Match: BBX19_ARATH (B-box zinc finger protein 19 OS=Arabidopsis thaliana GN=BBX19 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 8.1e-52
Identity = 103/151 (68.21%), Postives = 116/151 (76.82%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60
           MRILCD+CENAAA +FCAADEAALC  CD KVHMCNKLASRHVRVGLA PS   CCDICE
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120
           NAPAFFYCEIDGSSLCLQCD+VVHVGGKR H R+L L QR+EFPGDK   PK+ N +   
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGRFLLLRQRIEFPGDK---PKENNTRDNL 120

Query: 121 QVETVRGQNQDGVDSNGDGHSKRGNEVIDLN 152
           Q + V        + NG+ + K  +E+IDLN
Sbjct: 121 QNQRV------STNGNGEANGKIDDEMIDLN 142

[Close]

BLAST of CmoCh07G004400 vs. Swiss-Prot
Match: BBX18_ARATH (B-box zinc finger protein 18 OS=Arabidopsis thaliana GN=BBX18 PE=1 SV=2)

HSP 1 Score: 195.7 bits (496), Expect = 3.8e-49
Identity = 99/151 (65.56%), Postives = 116/151 (76.82%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60
           MRILCD+CE+AAA +FCAADEAALC +CD KVH CNKLASRH+RVGLA PS    CDICE
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120
           NAPAFFYCEIDGSSLCLQCD+VVHVGGKR H+R+L L QR+EFPGDK N    L ++  +
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLRC-Q 120

Query: 121 QVETVRGQNQDGVDSNGDGHSKRGNEVIDLN 152
           +  + RGQ  +G   NGD      + +IDLN
Sbjct: 121 KASSGRGQESNG---NGD----HDHNMIDLN 143

[Close]

BLAST of CmoCh07G004400 vs. Swiss-Prot
Match: BBX22_ARATH (B-box zinc finger protein 22 OS=Arabidopsis thaliana GN=BBX22 PE=1 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-20
Identity = 52/104 (50.00%), Postives = 67/104 (64.42%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGL-ASPSEVSCCDIC 60
           M+I C+ CE A AT+ C ADEAALC ACD K+H  NKLA +H RV L AS S +  CDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  ENAPAFFYCEIDGSSLCLQCDVVVHVGGKRM--HKRYLRLGQRV 102
           + A  FF+C  D + LC +CDV +H     +  H+R+L  G +V
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKV 104

[Close]

BLAST of CmoCh07G004400 vs. Swiss-Prot
Match: BBX25_ARATH (B-box zinc finger protein 25 OS=Arabidopsis thaliana GN=BBX25 PE=1 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-19
Identity = 56/118 (47.46%), Postives = 66/118 (55.93%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPS-EVSCCDIC 60
           M+I CD CE A ATL C ADEAALCA CDV+VH  NKLAS+H R+ L S S +   CDIC
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60

Query: 61  ENAPAFFYCEIDGSSLCLQCDVVVHVGGKRM--HKRYLRLGQRVEFPGDKQNDPKDLN 116
               AF +C  D + LC  CD   H    R   H+R+L  G RV       N   + N
Sbjct: 61  LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKN 118

[Close]

BLAST of CmoCh07G004400 vs. Swiss-Prot
Match: BBX24_ARATH (B-box zinc finger protein 24 OS=Arabidopsis thaliana GN=BBX24 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-19
Identity = 54/126 (42.86%), Postives = 72/126 (57.14%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPS-EVSCCDIC 60
           M+I CD CE A AT+ C ADEAALC  CD+++H  NKLAS+H R+ L S S +   CDIC
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61  ENAPAFFYCEIDGSSLCLQCDVVVHVGGKRM--HKRYLRLGQRVEFPGD------KQNDP 118
           +   AF +C  D + LC  CD  +HV   R   H+R+L  G +V           ++N P
Sbjct: 61  QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP 120

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BLAST of CmoCh07G004400 vs. TrEMBL
Match: A0A0A0KJB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G505230 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 5.8e-65
Identity = 131/168 (77.98%), Postives = 139/168 (82.74%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60
           MRILCDSCE+A ATLFCAADEAALCA CD KVHMCNKLASRHVRVGLA+PSEV  CDICE
Sbjct: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120
           NAPAFFYCEIDGSSLCLQCDV+VHVGGKRMHKRYLRL QRVEFPGDKQND KDLNV+  E
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE 120

Query: 121 QVETVRGQNQD-------------GVD---SNGDGHSKRGNEVIDLNM 153
           QVE V+ QN++             GV    SNGDGHSKR N+VIDLNM
Sbjct: 121 QVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 168

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BLAST of CmoCh07G004400 vs. TrEMBL
Match: A0A061DFT8_THECC (B-box type zinc finger family protein OS=Theobroma cacao GN=TCM_000244 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.0e-53
Identity = 111/170 (65.29%), Postives = 124/170 (72.94%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60
           MR LCDSCE+AAA +FCAADEAALC ACD KVHMCNKLASRHVRVGLA+PS+V  CDICE
Sbjct: 1   MRTLCDSCESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLANPSDVPLCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120
           NAPAFFYCEIDGSSLCLQCD++VHVGGKR H RYL   QRVEFPGDK  + +D   Q ++
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHARYLLFRQRVEFPGDKPGNVEDPASQPVD 120

Query: 121 QVETVRGQNQDG------------------VDSNGDGHSKRGNEVIDLNM 153
             ET RGQNQ                    VD+N DGH K   ++IDLNM
Sbjct: 121 PGETRRGQNQPAKPTVGESQQNHKVSSVQLVDANADGHVKMDTKMIDLNM 170

[Close]

BLAST of CmoCh07G004400 vs. TrEMBL
Match: D7SP26_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03030 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 5.6e-52
Identity = 109/170 (64.12%), Postives = 122/170 (71.76%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60
           MR LCD CE+AAA LFCAADEAALC  CD KVHMCNKLASRHVRVGLA PS+V  CDICE
Sbjct: 1   MRTLCDVCESAAAILFCAADEAALCRVCDEKVHMCNKLASRHVRVGLADPSDVPRCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120
           NAPAFFYCEIDG+SLCLQCD++VHVGGKR H RYL L QRVEFPGDK  + +D  +  ME
Sbjct: 61  NAPAFFYCEIDGTSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKSGNLEDPALLPME 120

Query: 121 QVETVRGQNQDG------------------VDSNGDGHSKRGNEVIDLNM 153
             E  RGQNQ                    +D+N DGH+K   ++IDLNM
Sbjct: 121 PGENRRGQNQSSKPTVVENQQNRRVSPVPTMDANADGHAKMDTKLIDLNM 170

[Close]

BLAST of CmoCh07G004400 vs. TrEMBL
Match: W9SKN4_9ROSA (Putative salt tolerance-like protein OS=Morus notabilis GN=L484_026716 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.3e-51
Identity = 112/172 (65.12%), Postives = 124/172 (72.09%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60
           MR LCD+CE+AAA +FCAADEAALC ACD KVHMCNKLASRHVRVGLA PS V  CDICE
Sbjct: 1   MRTLCDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLADPSAVPQCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120
           NAPAFFYCEIDGSSLCLQCD++VHVGGKR H RYL L QRVEFPGDK  +P++   Q  E
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGNPEEPASQPAE 120

Query: 121 QVETVRGQN------------QDGVDS--------NGDGHSKRGNEVIDLNM 153
           + E  RGQN            Q+   S        N DGHSKR  ++IDLNM
Sbjct: 121 RDEARRGQNLAPPKMVAEENQQNHAVSPVWILEANNADGHSKRDTKLIDLNM 172

[Close]

BLAST of CmoCh07G004400 vs. TrEMBL
Match: B9SU02_RICCO (Salt-tolerance protein, putative OS=Ricinus communis GN=RCOM_0753110 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.8e-51
Identity = 110/171 (64.33%), Postives = 122/171 (71.35%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60
           MR LCD+CE+AAA +FCAADEAALC ACD KVHMCNKLASRHVRVGLA+PS+V  CDICE
Sbjct: 1   MRTLCDNCESAAAAVFCAADEAALCGACDEKVHMCNKLASRHVRVGLANPSDVPRCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120
           NAPAFFYCE+DGSSLCLQCDV VHVGGKR H RYL L QRVEFPGDK   P     +AM+
Sbjct: 61  NAPAFFYCEVDGSSLCLQCDVTVHVGGKRTHGRYLLLRQRVEFPGDK---PDHTAAEAMD 120

Query: 121 QVETVRGQNQDG-------------------VDSNGDGHSKRGNEVIDLNM 153
             ET +GQN                       DSN DGH K  N++IDLN+
Sbjct: 121 PGETKKGQNPPPKLSLGENHQQNHRVSPLSLPDSNCDGHGKMDNKLIDLNI 168

[Close]

BLAST of CmoCh07G004400 vs. TAIR10
Match: AT2G21320.1 (AT2G21320.1 B-box zinc finger family protein)

HSP 1 Score: 195.7 bits (496), Expect = 2.1e-50
Identity = 99/151 (65.56%), Postives = 116/151 (76.82%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60
           MRILCD+CE+AAA +FCAADEAALC +CD KVH CNKLASRH+RVGLA PS    CDICE
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120
           NAPAFFYCEIDGSSLCLQCD+VVHVGGKR H+R+L L QR+EFPGDK N    L ++  +
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLRC-Q 120

Query: 121 QVETVRGQNQDGVDSNGDGHSKRGNEVIDLN 152
           +  + RGQ  +G   NGD      + +IDLN
Sbjct: 121 KASSGRGQESNG---NGD----HDHNMIDLN 143

[Close]

BLAST of CmoCh07G004400 vs. TAIR10
Match: AT4G38960.3 (AT4G38960.3 B-box type zinc finger family protein)

HSP 1 Score: 183.7 bits (465), Expect = 8.3e-47
Identity = 103/194 (53.09%), Postives = 116/194 (59.79%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVK----------------------------- 60
           MRILCD+CENAAA +FCAADEAALC  CD K                             
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKALHMRLDISKCSESVKRVQIVETSSLIWW 60

Query: 61  --------------VHMCNKLASRHVRVGLASPSEVSCCDICENAPAFFYCEIDGSSLCL 120
                         VHMCNKLASRHVRVGLA PS   CCDICENAPAFFYCEIDGSSLCL
Sbjct: 61  IKMGTFCLQSLHLVVHMCNKLASRHVRVGLAEPSNAPCCDICENAPAFFYCEIDGSSLCL 120

Query: 121 QCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAMEQVETVRGQNQDGVDSNG 152
           QCD+VVHVGGKR H R+L L QR+EFPGDK   PK+ N +   Q + V        + NG
Sbjct: 121 QCDMVVHVGGKRTHGRFLLLRQRIEFPGDK---PKENNTRDNLQNQRV------STNGNG 180

[Close]

BLAST of CmoCh07G004400 vs. TAIR10
Match: AT1G78600.2 (AT1G78600.2 light-regulated zinc finger protein 1)

HSP 1 Score: 100.9 bits (250), Expect = 7.1e-22
Identity = 52/104 (50.00%), Postives = 67/104 (64.42%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGL-ASPSEVSCCDIC 60
           M+I C+ CE A AT+ C ADEAALC ACD K+H  NKLA +H RV L AS S +  CDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  ENAPAFFYCEIDGSSLCLQCDVVVHVGGKRM--HKRYLRLGQRV 102
           + A  FF+C  D + LC +CDV +H     +  H+R+L  G +V
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKV 104

[Close]

BLAST of CmoCh07G004400 vs. TAIR10
Match: AT2G31380.1 (AT2G31380.1 salt tolerance homologue)

HSP 1 Score: 97.8 bits (242), Expect = 6.0e-21
Identity = 56/118 (47.46%), Postives = 66/118 (55.93%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPS-EVSCCDIC 60
           M+I CD CE A ATL C ADEAALCA CDV+VH  NKLAS+H R+ L S S +   CDIC
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60

Query: 61  ENAPAFFYCEIDGSSLCLQCDVVVHVGGKRM--HKRYLRLGQRVEFPGDKQNDPKDLN 116
               AF +C  D + LC  CD   H    R   H+R+L  G RV       N   + N
Sbjct: 61  LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKN 118

[Close]

BLAST of CmoCh07G004400 vs. TAIR10
Match: AT1G06040.1 (AT1G06040.1 B-box zinc finger family protein)

HSP 1 Score: 97.4 bits (241), Expect = 7.8e-21
Identity = 54/126 (42.86%), Postives = 72/126 (57.14%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPS-EVSCCDIC 60
           M+I CD CE A AT+ C ADEAALC  CD+++H  NKLAS+H R+ L S S +   CDIC
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61  ENAPAFFYCEIDGSSLCLQCDVVVHVGGKRM--HKRYLRLGQRVEFPGD------KQNDP 118
           +   AF +C  D + LC  CD  +HV   R   H+R+L  G +V           ++N P
Sbjct: 61  QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP 120

[Close]

BLAST of CmoCh07G004400 vs. NCBI nr
Match: gi|659080442|ref|XP_008440793.1| (PREDICTED: probable salt tolerance-like protein At1g78600 isoform X1 [Cucumis melo])

HSP 1 Score: 259.2 bits (661), Expect = 4.4e-66
Identity = 132/168 (78.57%), Postives = 142/168 (84.52%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60
           MRILCDSCE+AAATLFCAADEAALCA CD KVHMCNKLASRHVRVGLA+PSEV  CDICE
Sbjct: 1   MRILCDSCESAAATLFCAADEAALCAVCDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120
           NAPAFFYCEIDGSSLCLQCDV+VHVGGKRMHKRYLRL QRVEFPGDK+ND KD NV+ ME
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKRNDGKDQNVKPME 120

Query: 121 QVETVRGQNQD-------------GVD---SNGDGHSKRGNEVIDLNM 153
           QVE V+GQN++             GV+   SNGDGHSKR N+VIDLNM
Sbjct: 121 QVEKVKGQNEERGEIEKHEELRVSGVEKDYSNGDGHSKRPNKVIDLNM 168

[Close]

BLAST of CmoCh07G004400 vs. NCBI nr
Match: gi|449434190|ref|XP_004134879.1| (PREDICTED: B-box zinc finger protein 18 isoform X1 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 8.3e-65
Identity = 131/168 (77.98%), Postives = 139/168 (82.74%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60
           MRILCDSCE+A ATLFCAADEAALCA CD KVHMCNKLASRHVRVGLA+PSEV  CDICE
Sbjct: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120
           NAPAFFYCEIDGSSLCLQCDV+VHVGGKRMHKRYLRL QRVEFPGDKQND KDLNV+  E
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE 120

Query: 121 QVETVRGQNQD-------------GVD---SNGDGHSKRGNEVIDLNM 153
           QVE V+ QN++             GV    SNGDGHSKR N+VIDLNM
Sbjct: 121 QVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 168

[Close]

BLAST of CmoCh07G004400 vs. NCBI nr
Match: gi|659080446|ref|XP_008440796.1| (PREDICTED: probable salt tolerance-like protein At1g78600 isoform X2 [Cucumis melo])

HSP 1 Score: 236.5 bits (602), Expect = 3.1e-59
Identity = 125/168 (74.40%), Postives = 135/168 (80.36%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60
           MRILCDSCE+AAATLFCAADEAALCA CD KVHMCNKLASRHVRVGLA+PSEV  CDICE
Sbjct: 1   MRILCDSCESAAATLFCAADEAALCAVCDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120
           NAP       DGSSLCLQCDV+VHVGGKRMHKRYLRL QRVEFPGDK+ND KD NV+ ME
Sbjct: 61  NAP-------DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKRNDGKDQNVKPME 120

Query: 121 QVETVRGQNQD-------------GVD---SNGDGHSKRGNEVIDLNM 153
           QVE V+GQN++             GV+   SNGDGHSKR N+VIDLNM
Sbjct: 121 QVEKVKGQNEERGEIEKHEELRVSGVEKDYSNGDGHSKRPNKVIDLNM 161

[Close]

BLAST of CmoCh07G004400 vs. NCBI nr
Match: gi|778719639|ref|XP_011658037.1| (PREDICTED: B-box zinc finger protein 18 isoform X2 [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 5.8e-58
Identity = 124/168 (73.81%), Postives = 132/168 (78.57%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60
           MRILCDSCE+A ATLFCAADEAALCA CD KVHMCNKLASRHVRVGLA+PSEV  CDICE
Sbjct: 1   MRILCDSCESAPATLFCAADEAALCAICDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120
           NAP       DGSSLCLQCDV+VHVGGKRMHKRYLRL QRVEFPGDKQND KDLNV+  E
Sbjct: 61  NAP-------DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKQNDVKDLNVKPTE 120

Query: 121 QVETVRGQNQD-------------GVD---SNGDGHSKRGNEVIDLNM 153
           QVE V+ QN++             GV    SNGDGHSKR N+VIDLNM
Sbjct: 121 QVEKVKSQNEERGENEKHEELRVSGVTKDYSNGDGHSKRPNKVIDLNM 161

[Close]

BLAST of CmoCh07G004400 vs. NCBI nr
Match: gi|590702956|ref|XP_007046745.1| (B-box type zinc finger family protein [Theobroma cacao])

HSP 1 Score: 216.1 bits (549), Expect = 4.3e-53
Identity = 111/170 (65.29%), Postives = 124/170 (72.94%), Query Frame = 1


Query: 1   MRILCDSCENAAATLFCAADEAALCAACDVKVHMCNKLASRHVRVGLASPSEVSCCDICE 60
           MR LCDSCE+AAA +FCAADEAALC ACD KVHMCNKLASRHVRVGLA+PS+V  CDICE
Sbjct: 1   MRTLCDSCESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLANPSDVPLCDICE 60

Query: 61  NAPAFFYCEIDGSSLCLQCDVVVHVGGKRMHKRYLRLGQRVEFPGDKQNDPKDLNVQAME 120
           NAPAFFYCEIDGSSLCLQCD++VHVGGKR H RYL   QRVEFPGDK  + +D   Q ++
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHARYLLFRQRVEFPGDKPGNVEDPASQPVD 120

Query: 121 QVETVRGQNQDG------------------VDSNGDGHSKRGNEVIDLNM 153
             ET RGQNQ                    VD+N DGH K   ++IDLNM
Sbjct: 121 PGETRRGQNQPAKPTVGESQQNHKVSSVQLVDANADGHVKMDTKMIDLNM 170

The following BLAST results are available for this feature:

BLAST of CmoCh07G004400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BBX19_ARATH	8.1e-52	68.21	B-box zinc finger protein 19 OS=Arabidopsis thaliana GN=BBX19 PE=2 SV=1	[more]
BBX18_ARATH	3.8e-49	65.56	B-box zinc finger protein 18 OS=Arabidopsis thaliana GN=BBX18 PE=1 SV=2	[more]
BBX22_ARATH	1.3e-20	50.00	B-box zinc finger protein 22 OS=Arabidopsis thaliana GN=BBX22 PE=1 SV=2	[more]
BBX25_ARATH	1.1e-19	47.46	B-box zinc finger protein 25 OS=Arabidopsis thaliana GN=BBX25 PE=1 SV=2	[more]
BBX24_ARATH	1.4e-19	42.86	B-box zinc finger protein 24 OS=Arabidopsis thaliana GN=BBX24 PE=1 SV=1	[more]

BLAST of CmoCh07G004400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJB1_CUCSA	5.8e-65	77.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G505230 PE=4 SV=1	[more]
A0A061DFT8_THECC	3.0e-53	65.29	B-box type zinc finger family protein OS=Theobroma cacao GN=TCM_000244 PE=4 SV=1	[more]
D7SP26_VITVI	5.6e-52	64.12	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03030 PE=4 SV=...	[more]
W9SKN4_9ROSA	1.3e-51	65.12	Putative salt tolerance-like protein OS=Morus notabilis GN=L484_026716 PE=4 SV=1	[more]
B9SU02_RICCO	2.8e-51	64.33	Salt-tolerance protein, putative OS=Ricinus communis GN=RCOM_0753110 PE=4 SV=1	[more]

BLAST of CmoCh07G004400 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21320.1	2.1e-50	65.56	B-box zinc finger family protein	[more]
AT4G38960.3	8.3e-47	53.09	B-box type zinc finger family protein	[more]
AT1G78600.2	7.1e-22	50.00	light-regulated zinc finger protein 1	[more]
AT2G31380.1	6.0e-21	47.46	salt tolerance homologue	[more]
AT1G06040.1	7.8e-21	42.86	B-box zinc finger family protein	[more]

BLAST of CmoCh07G004400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080442\|ref\|XP_008440793.1\|	4.4e-66	78.57	PREDICTED: probable salt tolerance-like protein At1g78600 isoform X1 [Cucumis me...	[more]
gi\|449434190\|ref\|XP_004134879.1\|	8.3e-65	77.98	PREDICTED: B-box zinc finger protein 18 isoform X1 [Cucumis sativus]	[more]
gi\|659080446\|ref\|XP_008440796.1\|	3.1e-59	74.40	PREDICTED: probable salt tolerance-like protein At1g78600 isoform X2 [Cucumis me...	[more]
gi\|778719639\|ref\|XP_011658037.1\|	5.8e-58	73.81	PREDICTED: B-box zinc finger protein 18 isoform X2 [Cucumis sativus]	[more]
gi\|590702956\|ref\|XP_007046745.1\|	4.3e-53	65.29	B-box type zinc finger family protein [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000315	Znf_B-box

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0000989	transcription factor activity, transcription factor binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G004400.1	CmoCh07G004400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 4..42 score: 7.1E-7coord: 52..85 score: 5.
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 51..96 score: 3.2E-9coord: 4..47 score: 7.
IPR000315	B-box-type zinc finger	PROFILE	PS50119	ZF_BBOX	coord: 51..97 score: 8.688coord: 1..47 score: 10
None	No IPR available	PANTHER	PTHR31832	FAMILY NOT NAMED	coord: 1..152 score: 1.8
None	No IPR available	PANTHER	PTHR31832:SF5	B-BOX TYPE ZINC FINGER-CONTAINING PROTEIN	coord: 1..152 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G004400	Cucsa.043400	Cucumber (Gy14) v1	cgycmoB0043
CmoCh07G004400	CmaCh03G007030	Cucurbita maxima (Rimu)	cmacmoB667
CmoCh07G004400	CmaCh07G004420	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G004400	Cla014267	Watermelon (97103) v1	cmowmB816
CmoCh07G004400	Csa6G505230	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G004400	MELO3C007886	Melon (DHL92) v3.5.1	cmomeB793
CmoCh07G004400	ClCG01G020130	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G004400	CSPI06G31580	Wild cucumber (PI 183967)	cmocpiB873
CmoCh07G004400	Lsi01G006200	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G004400	Cp4.1LG10g00390	Cucurbita pepo (Zucchini)	cmocpeB806
CmoCh07G004400	Cp4.1LG19g09030	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G004400	MELO3C007886.2	Melon (DHL92) v3.6.1	cmomedB896
CmoCh07G004400	CsaV3_6G046900	Cucumber (Chinese Long) v3	cmocucB1019
CmoCh07G004400	Cla97C01G019520	Watermelon (97103) v2	cmowmbB849
CmoCh07G004400	Bhi03G000662	Wax gourd	cmowgoB1051
CmoCh07G004400	CsGy6G031120	Cucumber (Gy14) v2	cgybcmoB843
CmoCh07G004400	Carg07969	Silver-seed gourd	carcmoB0888
CmoCh07G004400	Carg00605	Silver-seed gourd	carcmoB0554

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh07G004400	CmoCh03G007280	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G004400	Wild cucumber (PI 183967)	cmocpiB855
CmoCh07G004400	Cucumber (Chinese Long) v2	cmocuB845
CmoCh07G004400	Watermelon (Charleston Gray)	cmowcgB775
CmoCh07G004400	Watermelon (97103) v1	cmowmB811
CmoCh07G004400	Cucurbita pepo (Zucchini)	cmocpeB819
CmoCh07G004400	Bottle gourd (USVL1VR-Ls)	cmolsiB794
CmoCh07G004400	Cucumber (Gy14) v2	cgybcmoB252
CmoCh07G004400	Cucumber (Gy14) v2	cgybcmoB420
CmoCh07G004400	Melon (DHL92) v3.6.1	cmomedB876
CmoCh07G004400	Silver-seed gourd	carcmoB1321
CmoCh07G004400	Cucumber (Chinese Long) v3	cmocucB0994
CmoCh07G004400	Watermelon (97103) v2	cmowmbB871
CmoCh07G004400	Watermelon (97103) v2	cmowmbB874
CmoCh07G004400	Cucurbita moschata (Rifu)	cmocmoB035
CmoCh07G004400	Cucurbita moschata (Rifu)	cmocmoB162
CmoCh07G004400	Cucumber (Gy14) v1	cgycmoB0945