CmoCh07G002770 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCAACAGCATTAAGGCATCTTCCGAGCAGATTAAACAAAATTAGCAATTAATAGCAGTAGCGCGCCTTCTAATTACGTTGTCTTTCTTTAAGTTTTCCTTTTACGGATTCCCAAGGAAGGCATTTTTCAGAGCCCAAATAAGAAACCCTAAGTTTCTACTTCCCTTGCGCTTTAATGGCGGATTTGGAGAAGCAGGAGAGGGTGTTTGGAGAAGAGGAGGATAAGTTTCTGGAGGAGGTCACGTTATTGGATTTCGATATGTTGTGTTCCACGGTGGCTATGCAGACCCAGGGAAAATGGGCAAAGTTGGAGAGTGCTGAAGACGCTAAAACGGGACCTGAAATCGGTGGGGTTTTCAGGATGTGGGAAGGTGAACTACTCGATTGCTTTGAGGACCGTCGCATCGCTATCGAATCCGCCTGGTTAGACTCCTTAATCCACTTTTTCTTCTCTCTATTCACCTTGTTTGGGGAAATTATTTCGTCTTTTTGTTCTTCCCTTTTTAGGTGTCTAAAAAAGTTGATCAATAGTTCCTATGCACATTTTTTGCTCATGGATGCGGAGTATCTATATTTGGTTGTGGTTATCTAGCAGGGGATGTATGTTCTGCGCAATTTTGAATTATAACTATGATTGATGATGCAGCTGTCCGTGTCACAGATTTGGGAAGAATATGGGAAGGGCTGGTTTTGGCACTTGTTTTCTTCAGGTGAACTTTTTCTTGGCTGCTTGAACCTTTAAAGGGAGAGAGGGGAAGAAGTTAGATTACAGTTTTCTTTGATCATCAAATTTTCTTAATGCATAGTTTTCCCTTCCTTACAAATGAAGATATATTATTGTGCAGGGAAGCGTTTATTTTGCTCTTGCTCTTGGTGCCCTTTGCAGCTTCATTGCCTTTTTGGTCACAAAACGCCATTACTTTGTATATTCAGCATTTGCTTTCACCATTGCAACAGTAACATATTTGGGGTTCTTCCGCACCCAGATGAGGAGGAAATTCAATATAAGGGTGAGACTTCTTTTTCTATCAGCTTATGGAAAGCCAAACGGCTAATAGTATATTTGGGATAGTTTTTCTGTTATATTATAGCAATTGTGTAACTGCTCGAGCCCACTGCTCGTAGGATATTGTCCTCTTTGGGCTTTCACTTCAACCGTTTCCCTTCAAGGTTTTAAAACGCGTCCACTAGAGATAAGTTTTCACACCTTTATAAGGAATGCTTCGTTCCCCTCTACAACCGATTAGGGATCTCACCATCCACCCCTCAAAGGGCAACCTCTTCCTAGTTGATGTGTTTTAAAACCGTGAGGTTGACAGCGATACGTAATGGGCCAAAGTGGACAATATATGATAGTAGTGGGTTTGGACTTCGGCTTTGGCTGTTACAAATGGTGTGTAGAGAGAGACTAGTAATAGGAAGTGAGGGTGAAAAGTGAGATTAACGAGAGAGTACATGGGCACAAGGTTACAAATCTCCACTCCAGGTTGGTTATACTAAAAAAAAAAAAAGAGAGAACACTTGTTGTGAGAGTACTAGCAAGGGCATATTGGTAGTTAGCTAGGGGTGCCTTGGTTCTATAAATAGAGGGAGTTAGTAGGGACCTTAGAAGGGGGATAATTTTGGATACCTTTGGGTGATGACTTAGGATATTGTACAGGGTGGGTGTGAGATCTGATAGGAGAGGGCAACAAAGTATTTTTTATAAAAGTGTGGAAATCTCTCTGTAACGTAGCGTTTTAAAACCGTGAGGACAATATTTGTTAGTGGTGAGCTTGAGCTACTATAGTAGGACTTCTGGGAGAGATATTGCCCTCTCGAGTTTTACTTTCTTTCTCATTAATATTGTTGAGTGAAAATTTCAGCGGCGTTTTTTTAGTTGGCTAATGTGATGATTAATAGTGTTTTATATTTCAGGGTGGAGATAGCTACTTGGATGACTGCGTCAACCACCTTATCTGCCCCTGCTGCGCCTTATCTCAGGTCTGTCCTTCAATATCTTCCTATCAAAACCTTGTATTCATATTAAAGTTCCTACTTCTCTCATCTTTTGTAAGCAACTTAAACTAACATATTCAATCGTCACTGATATACCTCTAAATGTGGAGCAGGAATCACGAACGTTGGAAATGAATAACGTTCAAGATGGCACATGGCACGGTCGGGGTGACACAATATGTATAGGTAGTTATGGTGATGCCAGCCGATTCGTTGAGCTAAACCCACCTTCTCCTGTCTCAACCAAATCCCCTGAAACCTGTGGCATTGTAAAGGATGTGCCAAATCGTGATCACTCTTGAAATCTGACCAATGTATGGCACGCAGCATGACATCGATAAGTCTCATGACGCGCTTTCGAGATTCTCCATCTGATTTCTTATCGAAGATGCACGATACACTGCCTTATTTCAGCAACATTGCTTCCAAAATGGTTAAGGCTGCAGTTGTTAACAATGGATATGGGGTTTCTGAACATCGATATAGAGGAGGCGGGAGGCTGAAAAGGACTCCATTCTTGAAGGATTCTTGATTTTTATCTACTGTTGTGTTCTACCACTGTGAAAATACACATGGTAGCGTGTTCTTCTGGTCTTTAAAGAAACAACACTTTTTAAACTTGTGTATATACTATACCATTAATTTGATGTATCAACTAGATGGATGCAGCAGTCCTTGATTCTGGCTGTTTTGACGTTCGTTCATTGTAACATTTTAGTTTTCGTACTTCTTTTCACTTGAAATTTCTGAAAACATCAGAATTTTAAATAATTAATGGTGTGTTCTTTATTTTCTAAAGGTGGTG TGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCAACAGCATTAAGGCATCTTCCGAGCAGATTAAACAAAATTAGCAATTAATAGCAGTAGCGCGCCTTCTAATTACGTTGTCTTTCTTTAAGTTTTCCTTTTACGGATTCCCAAGGAAGGCATTTTTCAGAGCCCAAATAAGAAACCCTAAGTTTCTACTTCCCTTGCGCTTTAATGGCGGATTTGGAGAAGCAGGAGAGGGTGTTTGGAGAAGAGGAGGATAAGTTTCTGGAGGAGGTCACGTTATTGGATTTCGATATGTTGTGTTCCACGGTGGCTATGCAGACCCAGGGAAAATGGGCAAAGTTGGAGAGTGCTGAAGACGCTAAAACGGGACCTGAAATCGGTGGGGTTTTCAGGATGTGGGAAGGTGAACTACTCGATTGCTTTGAGGACCGTCGCATCGCTATCGAATCCGCCTGCTGTCCGTGTCACAGATTTGGGAAGAATATGGGAAGGGCTGGTTTTGGCACTTGTTTTCTTCAGGGAAGCGTTTATTTTGCTCTTGCTCTTGGTGCCCTTTGCAGCTTCATTGCCTTTTTGGTCACAAAACGCCATTACTTTGTATATTCAGCATTTGCTTTCACCATTGCAACAGTAACATATTTGGGGTTCTTCCGCACCCAGATGAGGAGGAAATTCAATATAAGGGGTGGAGATAGCTACTTGGATGACTGCGTCAACCACCTTATCTGCCCCTGCTGCGCCTTATCTCAGGAATCACGAACGTTGGAAATGAATAACGTTCAAGATGGCACATGGCACGGTCGGGGTGACACAATATGTATAGGTAGTTATGGTGATGCCAGCCGATTCGTTGAGCTAAACCCACCTTCTCCTGTCTCAACCAAATCCCCTGAAACCTGTGGCATTGTAAAGGATGTGCCAAATCGTGATCACTCTTGAAATCTGACCAATGTATGGCACGCAGCATGACATCGATAAGTCTCATGACGCGCTTTCGAGATTCTCCATCTGATTTCTTATCGAAGATGCACGATACACTGCCTTATTTCAGCAACATTGCTTCCAAAATGGTTAAGGCTGCAGTTGTTAACAATGGATATGGGGTTTCTGAACATCGATATAGAGGAGGCGGGAGGCTGAAAAGGACTCCATTCTTGAAGGATTCTTGATTTTTATCTACTGTTGTGTTCTACCACTGTGAAAATACACATGGTAGCGTGTTCTTCTGGTCTTTAAAGAAACAACACTTTTTAAACTTGTGTATATACTATACCATTAATTTGATGTATCAACTAGATGGATGCAGCAGTCCTTGATTCTGGCTGTTTTGACGTTCGTTCATTGTAACATTTTAGTTTTCGTACTTCTTTTCACTTGAAATTTCTGAAAACATCAGAATTTTAAATAATTAATGGTGTGTTCTTTATTTTCTAAAGGTGGTG ATGGCGGATTTGGAGAAGCAGGAGAGGGTGTTTGGAGAAGAGGAGGATAAGTTTCTGGAGGAGGTCACGTTATTGGATTTCGATATGTTGTGTTCCACGGTGGCTATGCAGACCCAGGGAAAATGGGCAAAGTTGGAGAGTGCTGAAGACGCTAAAACGGGACCTGAAATCGGTGGGGTTTTCAGGATGTGGGAAGGTGAACTACTCGATTGCTTTGAGGACCGTCGCATCGCTATCGAATCCGCCTGCTGTCCGTGTCACAGATTTGGGAAGAATATGGGAAGGGCTGGTTTTGGCACTTGTTTTCTTCAGGGAAGCGTTTATTTTGCTCTTGCTCTTGGTGCCCTTTGCAGCTTCATTGCCTTTTTGGTCACAAAACGCCATTACTTTGTATATTCAGCATTTGCTTTCACCATTGCAACAGTAACATATTTGGGGTTCTTCCGCACCCAGATGAGGAGGAAATTCAATATAAGGGGTGGAGATAGCTACTTGGATGACTGCGTCAACCACCTTATCTGCCCCTGCTGCGCCTTATCTCAGGAATCACGAACGTTGGAAATGAATAACGTTCAAGATGGCACATGGCACGGTCGGGGTGACACAATATGTATAGGTAGTTATGGTGATGCCAGCCGATTCGTTGAGCTAAACCCACCTTCTCCTGTCTCAACCAAATCCCCTGAAACCTGTGGCATTGTAAAGGATGTGCCAAATCGTGATCACTCTTGA
BLAST of CmoCh07G002770 vs. Swiss-Prot
Match: PCR8_ARATH (Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana GN=PCR8 PE=1 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 9.4e-10 Identity = 46/142 (32.39%), Postives = 69/142 (48.59%), Query Frame = 1
BLAST of CmoCh07G002770 vs. Swiss-Prot
Match: PCR7_ARATH (Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana GN=PCR7 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07 Identity = 43/143 (30.07%), Postives = 58/143 (40.56%), Query Frame = 1
BLAST of CmoCh07G002770 vs. Swiss-Prot
Match: CNR5_MAIZE (Cell number regulator 5 OS=Zea mays GN=CNR5 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.3e-06 Identity = 39/138 (28.26%), Postives = 57/138 (41.30%), Query Frame = 1
BLAST of CmoCh07G002770 vs. TrEMBL
Match: A0A0A0KN60_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G516790 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 4.4e-115 Identity = 201/250 (80.40%), Postives = 220/250 (88.00%), Query Frame = 1
BLAST of CmoCh07G002770 vs. TrEMBL
Match: D7UDQ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0203g00180 PE=4 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 1.3e-90 Identity = 163/234 (69.66%), Postives = 190/234 (81.20%), Query Frame = 1
BLAST of CmoCh07G002770 vs. TrEMBL
Match: A0A061GFY1_THECC (PLAC8 family protein OS=Theobroma cacao GN=TCM_030021 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 7.1e-89 Identity = 165/249 (66.27%), Postives = 196/249 (78.71%), Query Frame = 1
BLAST of CmoCh07G002770 vs. TrEMBL
Match: A0A067JAL8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21332 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 5.1e-87 Identity = 164/237 (69.20%), Postives = 193/237 (81.43%), Query Frame = 1
BLAST of CmoCh07G002770 vs. TrEMBL
Match: B9SFE4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1096760 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 8.6e-87 Identity = 163/237 (68.78%), Postives = 182/237 (76.79%), Query Frame = 1
BLAST of CmoCh07G002770 vs. TAIR10
Match: AT1G11380.1 (AT1G11380.1 PLAC8 family protein) HSP 1 Score: 283.1 bits (723), Expect = 1.6e-76 Identity = 135/220 (61.36%), Postives = 168/220 (76.36%), Query Frame = 1
BLAST of CmoCh07G002770 vs. TAIR10
Match: AT1G52200.1 (AT1G52200.1 PLAC8 family protein) HSP 1 Score: 65.5 bits (158), Expect = 5.3e-11 Identity = 46/142 (32.39%), Postives = 69/142 (48.59%), Query Frame = 1
BLAST of CmoCh07G002770 vs. TAIR10
Match: AT3G18470.1 (AT3G18470.1 PLAC8 family protein) HSP 1 Score: 58.5 bits (140), Expect = 6.5e-09 Identity = 43/143 (30.07%), Postives = 58/143 (40.56%), Query Frame = 1
BLAST of CmoCh07G002770 vs. TAIR10
Match: AT2G17780.1 (AT2G17780.1 PLAC8 family protein) HSP 1 Score: 52.0 bits (123), Expect = 6.0e-07 Identity = 40/159 (25.16%), Postives = 66/159 (41.51%), Query Frame = 1
BLAST of CmoCh07G002770 vs. NCBI nr
Match: gi|659078834|ref|XP_008439930.1| (PREDICTED: uncharacterized protein LOC103484568 [Cucumis melo]) HSP 1 Score: 439.5 bits (1129), Expect = 3.8e-120 Identity = 209/249 (83.94%), Postives = 223/249 (89.56%), Query Frame = 1
BLAST of CmoCh07G002770 vs. NCBI nr
Match: gi|449433914|ref|XP_004134741.1| (PREDICTED: cell number regulator 5 [Cucumis sativus]) HSP 1 Score: 422.2 bits (1084), Expect = 6.3e-115 Identity = 201/250 (80.40%), Postives = 220/250 (88.00%), Query Frame = 1
BLAST of CmoCh07G002770 vs. NCBI nr
Match: gi|359495710|ref|XP_003635067.1| (PREDICTED: uncharacterized protein LOC100246768 [Vitis vinifera]) HSP 1 Score: 340.9 bits (873), Expect = 1.8e-90 Identity = 163/234 (69.66%), Postives = 190/234 (81.20%), Query Frame = 1
BLAST of CmoCh07G002770 vs. NCBI nr
Match: gi|590625332|ref|XP_007025854.1| (PLAC8 family protein [Theobroma cacao]) HSP 1 Score: 335.1 bits (858), Expect = 1.0e-88 Identity = 165/249 (66.27%), Postives = 196/249 (78.71%), Query Frame = 1
BLAST of CmoCh07G002770 vs. NCBI nr
Match: gi|802780818|ref|XP_012091463.1| (PREDICTED: uncharacterized protein LOC105649436 [Jatropha curcas]) HSP 1 Score: 328.9 bits (842), Expect = 7.3e-87 Identity = 164/237 (69.20%), Postives = 193/237 (81.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |