CmoCh07G002720 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGCCGTTAAGAGGAGGAGGGGTCAATTTTTAGCTTCGTTTTCGATGGAAGCGGAAGGTGAGCTGGTGGGAGAGAGAGAGAGAGAGAGAGATAGAACGGAACTGGAGAAGAAATAAATTGAAGTAAAGAAGAAGAGTTGAGGTCCGGAAGGGCCGTTTTAGCATTTTATTGAATGTTGTTGTCCTTGCGTACATGATTAGCGGGGAAAATGATCGATCCACGCGCTAAAACCCACTTTTTTTATTTTATTATTATTTTAATATAAATAAAATAAAATAAAAATAAGATAAAATCAATTCAAATTTAATTCGTTCCTTCTTTTTCTCTTTTGGTAGTAAACTAGAGCATTATTAGCATATGAGATCTAAAATTTGAATCCTTATAGTACATTTGTAATAAAAAAAAATTAATATTAGTTTTTTTTATATAAATATTATAATTTATTCATTCTATAAAACAAAACAAAAAATAATAATAATAGGTCGAATTAAACATATTTCAATTAATTTTGACCGTATCACAGTAACTAAATTTCTTAAGATTTTCAGTGGCATTAAATTTATGTTGTGACATTTAGTGGAGGACTTTGACCATATCTCATTGGTCTTAAATTCAAATTTAAAATACTTTTCAAAAGGCAAAATATAATAACCATTCATATAAGGTGGTGCCTGATGCTGACTTTGAAGGTTTCATCAATTCAAATTCTCATTCTGTTCCCTCATATTCCACTTCCCGATATATTCTTTAGTTATTTATTTTTAAAATTAATCCAAGAAAAAAAAAACTATTGTATTTAAATCCTCTAAATATGATCACGAATATTTGAAAATAGTTCATTTTTTTCGAAGAATTAAGATAAATTCAAGGTATTAAAGCTTTGATTTCATAATCTACTATTTTAAATAATATTAAATAATTAATTAATTGATGAGTTATGGTAAATTTAATTATATGGCATCAAGGGGAGACATGTAAATTGTAACAAAATTTCAATCAAACGTTGAATTTAATAGCAAGCGTGGAAGACTATACTATTAAAAGTCAACATTATTAGACAAAAGTTCCATTGAAAAACATTATTTAGGGAAGACGAGGTCAATAAGTCCACGTCGTCCACTAAAAGGTTATTTGGCGTTTTTCACAGGAAAAGGGTGGGGGATTCTGGTTTTTCCAACCCACTCGTGGTTCTGGTTGCAGCAGATCGGTTCTTTTATATATTATTGTAATTATTTTTCATTTTTGGGATTAAATTAAAAATTTATGGGATTTTATTTTTGCTCGGTGTATACGAAATCCAGAGCAACTTAAATGGGCCTAGTTGGGCCTTTTCTTCAGCCCATGGGAGTCAGCTCAATATCCGGATTCCCGCTATGGCTGTACTTCACTCTGTCTCGTTTCGCCACTGATCGATGGACTCGTTCTTCTCACTGTATCTCTGCAACTCCACGCAGCCGGTGCTGCAACATAAGGTCTCTTCTCTCCGTCCTTGTGGTTTTGTTTGATTTTTTCTTTTGGAGAATTTTGTGCGGGTGCCTGATGCTTTACTTAAATTCTTTCTTATTGTGTTGTATTGATCTCCTGTCTGCCATTGACGATGCAGAATACGAAGTATCGGAGAGAGCTTGAAGCAGCTGTAGATGTGGTGCAGAGAGCTTTTCGTATATTATTCGACGTAATTGCTCTGTCCTCTTTCTCTTTTATTTTGTTTTTTTTTTCAGATTGGGTGCTGTAATGTAATAAGTCGTTGTGAAGTCAGCTATAGATTACAATCTTACATCCTAAATCTTAACAAGACTGTACTACGGTTGTGTGATGATTGATGAATGTAATCACAACGCAGGATTTCTAATATGAGTATTTTTGAGAAGATGCTTAGGATCAATCTATTCAATCTCTCTTAATGTTTTAGAGAATATATATTTTGATAATTGGCAGGAATAATTGTCATTCATTTCTATTAACGGAGAAGTCAAGTTCTGCAAATGAACTTGCATTTGACAGGAAGTTGACAGGGGAGCGAATTTTGCATTTGCATTCGGAAGTAAGCCAGCCACATATTGTGTGGGGATTACTAATTGTGTTTGGTTTTAGTGTCTTTGGTTTTCTAATATGAGTGTCGTCATTGCCATTAAAATCTCATATACTATCTTTCGTCAAGAAAATTCTTCACTGCTAATGTGATTTTTTGTTATGAAGATGCTATTTTATTTGAAATGGAAGGATTTTGAAGTTTCCCTTTCGTACTATTTCATCCATTTGTGGAGATATCTAATATGTGCTTTGCATTGTACAGCTTTTTCTAAGCTCTCAATTTAGAGTTACATGTTATTCAATCAAATTAATTCCAATGCAGGTGTTGAATCCAATTGATTGTACACGAGGATTTCTTAGAGGAAATGATGTCCTATATGTGGTATGTCATCTAATCAGGCTGCTGCATTGTACTTATGTTATATTTATGTAGACAAGTAGGAGGTCCCAGAAAATTTATTCTGAATTTGGACACCTCATTCTGTGTGCGCCGAAAGCGGAACAAATGTGCTCACAACACCAATGAACGGAATTACACAAGAGACACCAAGATATTTTTTGATCTGAAGCTGTTTTATTAATTCTGAGCATGGCATTATATAGCCTTTACAATCATGGTTGAACCTAAAAATATCAGCCGAAAGAAACTTTAAGTCCCAAAAAATAGGACTAATCAGTCTTAAAGAATAGGACCTTAACACAATTTACAACACCTTCCCTAATTTCCAACTCTTCGAAAAATTGCAGGTAGGTTTGGCTCCTGTGGTTGAAGGAGAGATTGTATTAGGTGTCATGGAATGTCCTAACTGCCTCGTTGATTTGTCGGGAAAGTAA ATGGTGGCCGTTAAGAGGAGGAGGGGTCAATTTTTAGCTTCGTTTTCGATGGAAGCGGAAGGTGAGCTGCCGGTGCTGCAACATAAGAATACGAAGTATCGGAGAGAGCTTGAAGCAGCTGTAGATGTGGTGCAGAGAGCTTTTCGTATATTATTCGACGTGTTGAATCCAATTGATTGTACACGAGGATTTCTTAGAGGAAATGATGTCCTATATGTGGTAGGTTTGGCTCCTGTGGTTGAAGGAGAGATTGTATTAGGTGTCATGGAATGTCCTAACTGCCTCGTTGATTTGTCGGGAAAGTAA ATGGTGGCCGTTAAGAGGAGGAGGGGTCAATTTTTAGCTTCGTTTTCGATGGAAGCGGAAGGTGAGCTGCCGGTGCTGCAACATAAGAATACGAAGTATCGGAGAGAGCTTGAAGCAGCTGTAGATGTGGTGCAGAGAGCTTTTCGTATATTATTCGACGTGTTGAATCCAATTGATTGTACACGAGGATTTCTTAGAGGAAATGATGTCCTATATGTGGTAGGTTTGGCTCCTGTGGTTGAAGGAGAGATTGTATTAGGTGTCATGGAATGTCCTAACTGCCTCGTTGATTTGTCGGGAAAGTAA
BLAST of CmoCh07G002720 vs. Swiss-Prot
Match: DPNPM_ARATH (Putative PAP-specific phosphatase, mitochondrial OS=Arabidopsis thaliana GN=At4g05090 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.1e-09 Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 1
BLAST of CmoCh07G002720 vs. Swiss-Prot
Match: DPNP2_ARATH (SAL2 phosphatase OS=Arabidopsis thaliana GN=SAL2 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 3.1e-07 Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 1
BLAST of CmoCh07G002720 vs. TrEMBL
Match: C6JSE5_SORBI (Putative uncharacterized protein Sb0466s002010 (Fragment) OS=Sorghum bicolor GN=Sb0466s002010 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 7.6e-13 Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = 1
BLAST of CmoCh07G002720 vs. TrEMBL
Match: A0A0A0KHZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G516860 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.2e-11 Identity = 39/46 (84.78%), Postives = 40/46 (86.96%), Query Frame = 1
BLAST of CmoCh07G002720 vs. TrEMBL
Match: M0TMC4_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.0e-09 Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 1
BLAST of CmoCh07G002720 vs. TrEMBL
Match: V4W8A0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015399mg PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.3e-09 Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 1
BLAST of CmoCh07G002720 vs. TrEMBL
Match: V4TPJ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015399mg PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.3e-09 Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 1
BLAST of CmoCh07G002720 vs. TAIR10
Match: AT4G05090.1 (AT4G05090.1 Inositol monophosphatase family protein) HSP 1 Score: 63.9 bits (154), Expect = 6.4e-11 Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 1
BLAST of CmoCh07G002720 vs. TAIR10
Match: AT5G64000.1 (AT5G64000.1 Inositol monophosphatase family protein) HSP 1 Score: 55.8 bits (133), Expect = 1.7e-08 Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 1
BLAST of CmoCh07G002720 vs. TAIR10
Match: AT5G63990.1 (AT5G63990.1 Inositol monophosphatase family protein) HSP 1 Score: 50.1 bits (118), Expect = 9.5e-07 Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 1
BLAST of CmoCh07G002720 vs. TAIR10
Match: AT5G09290.1 (AT5G09290.1 Inositol monophosphatase family protein) HSP 1 Score: 49.7 bits (117), Expect = 1.2e-06 Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 1
BLAST of CmoCh07G002720 vs. TAIR10
Match: AT5G63980.1 (AT5G63980.1 Inositol monophosphatase family protein) HSP 1 Score: 48.9 bits (115), Expect = 2.1e-06 Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 1
BLAST of CmoCh07G002720 vs. NCBI nr
Match: gi|253760833|ref|XP_002489018.1| (hypothetical protein SORBIDRAFT_0466s002010, partial [Sorghum bicolor]) HSP 1 Score: 81.3 bits (199), Expect = 1.1e-12 Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = 1
BLAST of CmoCh07G002720 vs. NCBI nr
Match: gi|449433900|ref|XP_004134734.1| (PREDICTED: putative PAP-specific phosphatase, mitochondrial isoform X1 [Cucumis sativus]) HSP 1 Score: 75.9 bits (185), Expect = 4.6e-11 Identity = 39/46 (84.78%), Postives = 40/46 (86.96%), Query Frame = 1
BLAST of CmoCh07G002720 vs. NCBI nr
Match: gi|778720664|ref|XP_011658191.1| (PREDICTED: putative PAP-specific phosphatase, mitochondrial isoform X3 [Cucumis sativus]) HSP 1 Score: 75.9 bits (185), Expect = 4.6e-11 Identity = 39/46 (84.78%), Postives = 40/46 (86.96%), Query Frame = 1
BLAST of CmoCh07G002720 vs. NCBI nr
Match: gi|659078795|ref|XP_008439911.1| (PREDICTED: putative PAP-specific phosphatase, mitochondrial isoform X1 [Cucumis melo]) HSP 1 Score: 75.9 bits (185), Expect = 4.6e-11 Identity = 39/46 (84.78%), Postives = 40/46 (86.96%), Query Frame = 1
BLAST of CmoCh07G002720 vs. NCBI nr
Match: gi|778720660|ref|XP_011658190.1| (PREDICTED: putative PAP-specific phosphatase, mitochondrial isoform X2 [Cucumis sativus]) HSP 1 Score: 75.9 bits (185), Expect = 4.6e-11 Identity = 39/46 (84.78%), Postives = 40/46 (86.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |