CmoCh07G002310 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G002310
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionDof zinc finger protein
LocationCmo_Chr07 : 1157272 .. 1158649 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAAAGAATTAAAAATACTGAAACCACAGGGACAACATTCACCACAACTCAGATACAGAAACGTTCGGAAAGAGAGAAAAAGATCAATTCCCACCACTCCGCATCCATCCACCGCCGCCGCCGCCGCCGCTGCCGCCCCTGATCGCCCCCAGAATCCAACATATCCGTTTACGTAACAAAATGAAATCTTTTGCTTTTTCGTTTGAATTTATGTGATGATCCCTTCTGGATGTGTGTTTTTTTTTTTCAGACCATCATTTATTTTCAGCTCAATAATGTCTGCCCTACTTCTGTGTCTCTGAAACTTAATATCATTTCGCAAATTTTCTTTTTTCTTTTTTGTCGTAATAAAATTAAAAACCCCATCTTGTGGTAGAAAACCCTAGCTGATTCATGCAGAGAAGGGGGAAGTTCTTGAAGCCTAAAACGCTCTCCATTTAGTATTTCTCTAAGATCCCAAAAAACCCTTTTTGTTGCAAATCGATTGGTTGAGAGATGCAGCGTGGGCGAGATGATCAAGATCGGAGATTGAAGGCTCTACAAGCGCAAAATCAAGCTCAGCCACAGCCACAAAAATGCCCTCGTTGTGATTCTCTCAACACAAAGTTTTGTTATTACAATAACTACAGCTTATCTCAGCCTCGTTATCTTTGCAAGACTTGTAGAAGGTACTGGACTCACGGTGGTACTCTCCGTAACGTCCCCGTCGGCGGTGGCTGCCGGAAGGGTAAACGACCCAAGCAATCTTCTCACTCATCCGACAACTCCAACTCACAACCGTTGCCATCACTACCGCTGCCGCAGATAGTCCAATCCAGTTTAACAACAACTCCGCCGCCCGTAATTTTCTCGGGTACTCCCGTCATCACGCCGTCCTCTTTTTTCAATCCTGGTGAGCAAGATTAGAACTTGACCTTAATTTAGTTAAAAAAAAAAATCTCTTTTTTTGAATCAATTTCTCAGTCCTTCCTATTTTGTTGGAATCATGGAATAAAAAAGATGGAATTTTTATGATGCAGTTGGAGAATTGGGGTCATCTTCCAGCTGGGTCAATTCATTTGGATCATCACAAGGGCAGCGTCCAATTCAACCACCGGAAATAATCTACGAAATGATGGACCAATCATCAGGGAAGGCCGCCGTGAGTTCATCTTCTCAAGCAGGGTGGTCGGAAAGTTACATCAACAATTATATTTCAAACCCAATCGCCGCAGCAGCCGGAGAGAACATTGTCTGGACACCAAACAACAACAACAACAACAATACCGCCATGGCGGCCACAGGCAACCCCACGAACAATAGTACTACAATTAACCAGTGGCCTGATTACATGGCAGGATTCGATCCACCCCCATGACATGATCGATCACAAATCTG

mRNA sequence

TAAAAAGAATTAAAAATACTGAAACCACAGGGACAACATTCACCACAACTCAGATACAGAAACGTTCGGAAAGAGAGAAAAAGATCAATTCCCACCACTCCGCATCCATCCACCGCCGCCGCCGCCGCCGCTGCCGCCCCTGATCGCCCCCAGAATCCAACATATCCGTTTACGTAACAAAATGAAATCTTTTGCTTTTTCGTTTGAATTTATGTGATGATCCCTTCTGGATGTGTGTTTTTTTTTTTCAGACCATCATTTATTTTCAGCTCAATAATGTCTGCCCTACTTCTGTGTCTCTGAAACTTAATATCATTTCGCAAATTTTCTTTTTTCTTTTTTGTCGTAATAAAATTAAAAACCCCATCTTGTGGTAGAAAACCCTAGCTGATTCATGCAGAGAAGGGGGAAGTTCTTGAAGCCTAAAACGCTCTCCATTTAGTATTTCTCTAAGATCCCAAAAAACCCTTTTTGTTGCAAATCGATTGGTTGAGAGATGCAGCGTGGGCGAGATGATCAAGATCGGAGATTGAAGGCTCTACAAGCGCAAAATCAAGCTCAGCCACAGCCACAAAAATGCCCTCGTTGTGATTCTCTCAACACAAAGTTTTGTTATTACAATAACTACAGCTTATCTCAGCCTCGTTATCTTTGCAAGACTTGTAGAAGGTACTGGACTCACGGTGGTACTCTCCGTAACGTCCCCGTCGGCGGTGGCTGCCGGAAGGGTAAACGACCCAAGCAATCTTCTCACTCATCCGACAACTCCAACTCACAACCGTTGCCATCACTACCGCTGCCGCAGATAGTCCAATCCAGTTTAACAACAACTCCGCCGCCCGTAATTTTCTCGGGTACTCCCGTCATCACGCCGTCCTCTTTTTTCAATCCTGTTGGAGAATTGGGGTCATCTTCCAGCTGGGTCAATTCATTTGGATCATCACAAGGGCAGCGTCCAATTCAACCACCGGAAATAATCTACGAAATGATGGACCAATCATCAGGGAAGGCCGCCGTGAGTTCATCTTCTCAAGCAGGGTGGTCGGAAAGTTACATCAACAATTATATTTCAAACCCAATCGCCGCAGCAGCCGGAGAGAACATTGTCTGGACACCAAACAACAACAACAACAACAATACCGCCATGGCGGCCACAGGCAACCCCACGAACAATAGTACTACAATTAACCAGTGGCCTGATTACATGGCAGGATTCGATCCACCCCCATGACATGATCGATCACAAATCTG

Coding sequence (CDS)

ATGCAGCGTGGGCGAGATGATCAAGATCGGAGATTGAAGGCTCTACAAGCGCAAAATCAAGCTCAGCCACAGCCACAAAAATGCCCTCGTTGTGATTCTCTCAACACAAAGTTTTGTTATTACAATAACTACAGCTTATCTCAGCCTCGTTATCTTTGCAAGACTTGTAGAAGGTACTGGACTCACGGTGGTACTCTCCGTAACGTCCCCGTCGGCGGTGGCTGCCGGAAGGGTAAACGACCCAAGCAATCTTCTCACTCATCCGACAACTCCAACTCACAACCGTTGCCATCACTACCGCTGCCGCAGATAGTCCAATCCAGTTTAACAACAACTCCGCCGCCCGTAATTTTCTCGGGTACTCCCGTCATCACGCCGTCCTCTTTTTTCAATCCTGTTGGAGAATTGGGGTCATCTTCCAGCTGGGTCAATTCATTTGGATCATCACAAGGGCAGCGTCCAATTCAACCACCGGAAATAATCTACGAAATGATGGACCAATCATCAGGGAAGGCCGCCGTGAGTTCATCTTCTCAAGCAGGGTGGTCGGAAAGTTACATCAACAATTATATTTCAAACCCAATCGCCGCAGCAGCCGGAGAGAACATTGTCTGGACACCAAACAACAACAACAACAACAATACCGCCATGGCGGCCACAGGCAACCCCACGAACAATAGTACTACAATTAACCAGTGGCCTGATTACATGGCAGGATTCGATCCACCCCCATGA
Homology
[Close]
BLAST of CmoCh07G002310 vs. Swiss-Prot
Match: DOF54_ARATH (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4 PE=2 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-25
Identity = 56/87 (64.37%), Postives = 63/87 (72.41%), Query Frame = 1 

Query: 9   DRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRN 68
           DRR++A Q       Q  KCPRC+SLNTKFCYYNNY+LSQPR+ CK CRRYWT GG LRN
Sbjct: 34  DRRMRAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRN 93

Query: 69  VPVGGGCRKGKRPKQSSHSSDNSNSQP 96
           VPVGGGCRK KR K     S +S  +P
Sbjct: 94  VPVGGGCRKAKRSKTKQVPSSSSADKP 120

[Close]
BLAST of CmoCh07G002310 vs. Swiss-Prot
Match: PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-25
Identity = 61/129 (47.29%), Postives = 81/129 (62.79%), Query Frame = 1 

Query: 8   QDRRLKALQAQNQAQPQPQ-----KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTH 67
           Q R +  +    + +P+PQ     KCPRCDS NTKFCYYNNYS+SQPRY CK CRRYWTH
Sbjct: 37  QTRAMPQIGGSGERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTH 96

Query: 68  GGTLRNVPVGGGCRKGKRPKQ---SSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFS 127
           GGTLRNVP+GGGCRK K   +    SH+S +S++   P  P      S+++     ++  
Sbjct: 97  GGTLRNVPIGGGCRKNKHASRFVLGSHTSSSSSATYAPLSPSTNASSSNMSINKHMMMVP 156

Query: 128 GTPVITPSS 129
              + TP++
Sbjct: 157 NMTMPTPTT 165

[Close]
BLAST of CmoCh07G002310 vs. Swiss-Prot
Match: DOF14_ARATH (Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-24
Identity = 55/79 (69.62%), Postives = 61/79 (77.22%), Query Frame = 1 

Query: 16 QAQNQAQPQPQ-KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRNVPVGGG 75
          Q Q   QPQPQ KCPRCDS NTKFCYYNNYSLSQPR+ CK C+RYWT GGTLRNVPVGG 
Sbjct: 16 QQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGS 75

Query: 76 CRKGKRPKQSSHSSDNSNS 94
           RK KR K+ S ++  + S
Sbjct: 76 YRKNKRVKRPSTATTTTAS 94

[Close]
BLAST of CmoCh07G002310 vs. Swiss-Prot
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.8e-24
Identity = 50/81 (61.73%), Postives = 63/81 (77.78%), Query Frame = 1 

Query: 13  KALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRNVPVG 72
           +A QA         KCPRC+S NTKFCY+NNYSL+QPR+ CKTCRRYWT GG LRNVPVG
Sbjct: 76  RARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVG 135

Query: 73  GGCRKGKRPKQSSHSSDNSNS 94
           GGCR+ +R K +S++++NS +
Sbjct: 136 GGCRRNRRTKSNSNNNNNSTA 156

[Close]
BLAST of CmoCh07G002310 vs. Swiss-Prot
Match: DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.0e-24
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 1 

Query: 7   DQDRRLKALQAQNQAQPQPQ----KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTH 66
           D D++ K   A    +PQP     +CPRCDS NTKFCYYNNYSL+QPRY CK+CRRYWT 
Sbjct: 33  DNDQK-KPSPATAVTRPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTK 92

Query: 67  GGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQP 96
           GGTLRN+PVGGGCRK KR   S+  S  +  +P
Sbjct: 93  GGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEP 124

[Close]
BLAST of CmoCh07G002310 vs. TrEMBL
Match: A0A0A0KLH8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517940 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.0e-79
Identity = 178/245 (72.65%), Postives = 190/245 (77.55%), Query Frame = 1 

Query: 8   QDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 67
           QDRRLK++Q Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR
Sbjct: 4   QDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 63

Query: 68  NVPVGGGCRKGKRPKQSSHSSDNSNSQPL-----PSLPLPQIVQSSL-TTTPPPVIFSGT 127
           NVPVGGGCRKGKR KQ S SS+NS+ +PL       LP PQIV  SL TTT   VI+SGT
Sbjct: 64  NVPVGGGCRKGKRLKQPSQSSNNSSVKPLVQTSASPLPPPQIVPLSLSTTTSQHVIYSGT 123

Query: 128 PVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKA-AVSSSSQA 187
           PVITP SFFN  GEL SSSSW++SFGSS      Q PEIIY+MMDQSSGKA A SSS  A
Sbjct: 124 PVITPPSFFNSGGELLSSSSWISSFGSSS-----QGPEIIYDMMDQSSGKADANSSSPAA 183

Query: 188 GWSESYI-NNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAG 245
           GWSESYI NN ISNPI AA G+ +VW P   NNN T  AAT   T N  TINQWPDYM G
Sbjct: 184 GWSESYINNNSISNPI-AATGDAVVW-PAGENNNATLAAAT---TTNIATINQWPDYMPG 238

[Close]
BLAST of CmoCh07G002310 vs. TrEMBL
Match: A0A0D2UNM9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G168400 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.6e-35
Identity = 92/143 (64.34%), Postives = 103/143 (72.03%), Query Frame = 1 

Query: 8   QDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 67
           QD+RLK L  +NQ Q  PQKCPRC+SLNTKFCYYNNYSLSQPRY CKTCRRYWT GGTLR
Sbjct: 20  QDQRLKPLTGENQQQHPPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLR 79

Query: 68  NVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSGTPVITPS 127
           NVPVGGGCRKGKR K SS S +NS SQPL  +P  Q  Q    T+P  +I S  P+I+ S
Sbjct: 80  NVPVGGGCRKGKRTKVSS-SGENSRSQPL--IPQQQAAQQHSLTSPQSMI-SSNPMISVS 139

Query: 128 SFFNPVGELGS--SSSWVNSFGS 149
           + F    E GS  SSS + S GS
Sbjct: 140 AAFR-TKESGSLASSSAIPSVGS 157

[Close]
BLAST of CmoCh07G002310 vs. TrEMBL
Match: A0A067GD59_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042156mg PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.7e-34
Identity = 89/164 (54.27%), Postives = 103/164 (62.80%), Query Frame = 1 

Query: 5   RDDQDRRLKALQA-----QNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRY 64
           R  QDRRLK +Q      Q Q QPQPQKCPRC+SLNTKFCYYNNYSLSQPRY CKTCRRY
Sbjct: 13  RKQQDRRLKTMQGGTENQQQQEQPQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRY 72

Query: 65  WTHGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFS 124
           WT GGTLRNVPVGGGCRKGKR K SS S + S +   P  P P     +LTTT   ++ S
Sbjct: 73  WTQGGTLRNVPVGGGCRKGKRTKTSSVSGEASRASQPPQPPSPP--HPNLTTTQQNILSS 132

Query: 125 GTPVIT-----------PSSFFNPVGELGSSSSWVNSFGSSQGQ 153
             PVIT           P++    +G    S  +++S  + Q Q
Sbjct: 133 SNPVITTGPPVLRTKLEPAAASPSMGSYYPSGGFLSSLAAIQSQ 174

[Close]
BLAST of CmoCh07G002310 vs. TrEMBL
Match: V4UEJ3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015879mg PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.0e-34
Identity = 87/162 (53.70%), Postives = 104/162 (64.20%), Query Frame = 1 

Query: 5   RDDQDRRLKALQA-----QNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRY 64
           R  QDRRLK +Q      Q Q QPQPQKCPRC+SLNTKFCYYNNYSLSQPRY CKTCRRY
Sbjct: 13  RKQQDRRLKTMQGGTENQQQQEQPQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRY 72

Query: 65  WTHGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLP-----QIVQSSLTTTPP 124
           WT GGTLRNVPVGGGCRKGKR K SS S + S +   P  P P        Q ++ ++  
Sbjct: 73  WTQGGTLRNVPVGGGCRKGKRTKTSSVSGEASRASQPPQPPSPPHPNFTTTQQNILSSSN 132

Query: 125 PVIFSGTPV----ITPSSFFNPVGELGSSSSWVNSFGSSQGQ 153
           PVI +G PV    + P++    +G    S  +++S  + Q Q
Sbjct: 133 PVITTGPPVLRTKLEPAAAPPSMGSYYPSGGFLSSLAAIQSQ 174

[Close]
BLAST of CmoCh07G002310 vs. TrEMBL
Match: A0A0B2QYB9_GLYSO (Dof zinc finger protein DOF5.3 OS=Glycine soja GN=glysoja_045887 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-33
Identity = 110/273 (40.29%), Postives = 148/273 (54.21%), Query Frame = 1 

Query: 8   QDRRLKAL-----QAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTH 67
           +D R+K +     Q Q QA  QPQKCPRCDSLNTKFCYYNNYSLSQPRY CKTCRRYWT 
Sbjct: 16  RDSRVKEIRQGDAQIQVQAPQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKTCRRYWTQ 75

Query: 68  GGTLRNVPVGGGCRKGKRPKQSSHSSD---NSNSQPLP---SLPLPQIVQSSLTTTPPPV 127
           GGTLRNVPVGGGCRKGKR K S+ SS    NS+S+ LP     P   +VQ+        V
Sbjct: 76  GGTLRNVPVGGGCRKGKRAKSSNSSSSENMNSSSRSLPQQQQQPQGVVVQTQAPPLTTVV 135

Query: 128 IFSGTPVITPSSFFNPVGELGSSSS--WVNSFGSSQGQRPIQPPEIIYEM---------- 187
                  +  S+F+   G+   SS+   ++ F   +   PI PP + ++M          
Sbjct: 136 KAKDPSSVVASTFYQSGGDTLRSSNLGLLSGFNVQRPIGPIHPPHLYHQMGSGEREMVSL 195

Query: 188 -----MDQSSGKAAVSSSSQAG-----WSESYINNYISNPIAAAAGENI---VWTPNNNN 245
                ++ SS   A + ++ +G     W  S+INN  +N    A+  ++   + T    N
Sbjct: 196 YEQGLVNPSSSSMANTDTNSSGVSQHDWPMSFINNNNNNASNRASDASLWSTISTTVGGN 255

[Close]
BLAST of CmoCh07G002310 vs. TAIR10
Match: AT5G60850.1 (AT5G60850.1 OBF binding protein 4)

HSP 1 Score: 117.9 bits (294), Expect = 9.0e-27
Identity = 56/87 (64.37%), Postives = 63/87 (72.41%), Query Frame = 1 

Query: 9   DRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRN 68
           DRR++A Q       Q  KCPRC+SLNTKFCYYNNY+LSQPR+ CK CRRYWT GG LRN
Sbjct: 34  DRRMRAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRN 93

Query: 69  VPVGGGCRKGKRPKQSSHSSDNSNSQP 96
           VPVGGGCRK KR K     S +S  +P
Sbjct: 94  VPVGGGCRKAKRSKTKQVPSSSSADKP 120

[Close]
BLAST of CmoCh07G002310 vs. TAIR10
Match: AT1G28310.2 (AT1G28310.2 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 115.2 bits (287), Expect = 5.8e-26
Identity = 55/79 (69.62%), Postives = 61/79 (77.22%), Query Frame = 1 

Query: 16  QAQNQAQPQPQ-KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRNVPVGGG 75
           Q Q   QPQPQ KCPRCDS NTKFCYYNNYSLSQPR+ CK C+RYWT GGTLRNVPVGG 
Sbjct: 30  QQQQPQQPQPQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGS 89

Query: 76  CRKGKRPKQSSHSSDNSNS 94
            RK KR K+ S ++  + S
Sbjct: 90  YRKNKRVKRPSTATTTTAS 108

[Close]
BLAST of CmoCh07G002310 vs. TAIR10
Match: AT2G37590.1 (AT2G37590.1 DNA binding with one finger 2.4)

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-25
Identity = 50/81 (61.73%), Postives = 63/81 (77.78%), Query Frame = 1 

Query: 13  KALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLRNVPVG 72
           +A QA         KCPRC+S NTKFCY+NNYSL+QPR+ CKTCRRYWT GG LRNVPVG
Sbjct: 76  RARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVG 135

Query: 73  GGCRKGKRPKQSSHSSDNSNS 94
           GGCR+ +R K +S++++NS +
Sbjct: 136 GGCRRNRRTKSNSNNNNNSTA 156

[Close]
BLAST of CmoCh07G002310 vs. TAIR10
Match: AT5G60200.1 (AT5G60200.1 TARGET OF MONOPTEROS 6)

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-25
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 1 

Query: 7   DQDRRLKALQAQNQAQPQPQ----KCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTH 66
           D D++ K   A    +PQP     +CPRCDS NTKFCYYNNYSL+QPRY CK+CRRYWT 
Sbjct: 33  DNDQK-KPSPATAVTRPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTK 92

Query: 67  GGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQP 96
           GGTLRN+PVGGGCRK KR   S+  S  +  +P
Sbjct: 93  GGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEP 124

[Close]
BLAST of CmoCh07G002310 vs. TAIR10
Match: AT4G00940.1 (AT4G00940.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-25
Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 1 

Query: 6   DDQDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGT 65
           DD+ + +  +  + Q   +P+ CPRC+S NTKFCYYNNYSL+QPRYLCK+CRRYWT GG+
Sbjct: 51  DDEKKLMTTMSTRPQ---EPRNCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGS 110

Query: 66  LRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPP 115
           LRNVPVGGG RK K+     +SS +S+++ LP L  P +  SS +++ P
Sbjct: 111 LRNVPVGGGSRKNKK-LPFPNSSTSSSTKNLPDLNPPFVFTSSASSSNP 155

[Close]
BLAST of CmoCh07G002310 vs. NCBI nr
Match: gi|449434340|ref|XP_004134954.1| (PREDICTED: dof zinc finger protein DOF1.4-like [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 1.5e-79
Identity = 178/245 (72.65%), Postives = 190/245 (77.55%), Query Frame = 1 

Query: 8   QDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 67
           QDRRLK++Q Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR
Sbjct: 4   QDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 63

Query: 68  NVPVGGGCRKGKRPKQSSHSSDNSNSQPL-----PSLPLPQIVQSSL-TTTPPPVIFSGT 127
           NVPVGGGCRKGKR KQ S SS+NS+ +PL       LP PQIV  SL TTT   VI+SGT
Sbjct: 64  NVPVGGGCRKGKRLKQPSQSSNNSSVKPLVQTSASPLPPPQIVPLSLSTTTSQHVIYSGT 123

Query: 128 PVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKA-AVSSSSQA 187
           PVITP SFFN  GEL SSSSW++SFGSS      Q PEIIY+MMDQSSGKA A SSS  A
Sbjct: 124 PVITPPSFFNSGGELLSSSSWISSFGSSS-----QGPEIIYDMMDQSSGKADANSSSPAA 183

Query: 188 GWSESYI-NNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDYMAG 245
           GWSESYI NN ISNPI AA G+ +VW P   NNN T  AAT   T N  TINQWPDYM G
Sbjct: 184 GWSESYINNNSISNPI-AATGDAVVW-PAGENNNATLAAAT---TTNIATINQWPDYMPG 238

[Close]
BLAST of CmoCh07G002310 vs. NCBI nr
Match: gi|659078665|ref|XP_008439844.1| (PREDICTED: dof zinc finger protein DOF1.4-like [Cucumis melo])

HSP 1 Score: 301.2 bits (770), Expect = 1.6e-78
Identity = 176/248 (70.97%), Postives = 188/248 (75.81%), Query Frame = 1 

Query: 8   QDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 67
           QDRRLK++Q Q+Q QPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR
Sbjct: 4   QDRRLKSVQVQDQVQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 63

Query: 68  NVPVGGGCRKGKRPKQSSHSSDNSNS--------QPLPSLPLPQIVQSSL-TTTPPPVIF 127
           NVPVGGGCRKGKR KQSS SS+N++S           P LP PQIV  SL TTT   VIF
Sbjct: 64  NVPVGGGCRKGKRLKQSSQSSNNNSSVKSSLVQTSASPVLPPPQIVPLSLSTTTSQHVIF 123

Query: 128 SGTPVITPSSFFNPVGELGSSSSWVNSFGSSQGQRPIQPPEIIYEMMDQSSGKA-AVSSS 187
           SGTPVITP SFFN  GEL SSSSW+NSFGSS      Q PEIIY+MMDQSSGKA A SSS
Sbjct: 124 SGTPVITPPSFFNSGGELLSSSSWINSFGSSS-----QGPEIIYDMMDQSSGKADANSSS 183

Query: 188 SQAGWSESYI-NNYISNPIAAAAGENIVWTPNNNNNNNTAMAATGNPTNNSTTINQWPDY 245
             AGWSESYI NN ISNP+ AA G+ +VW    NN    A  A    TNN+ TINQWPDY
Sbjct: 184 PAAGWSESYINNNSISNPM-AATGDAVVWPAGENN----ATLAAATSTNNA-TINQWPDY 240

[Close]
BLAST of CmoCh07G002310 vs. NCBI nr
Match: gi|823229938|ref|XP_012447707.1| (PREDICTED: dof zinc finger protein DOF1.2-like [Gossypium raimondii])

HSP 1 Score: 157.1 bits (396), Expect = 3.8e-35
Identity = 92/143 (64.34%), Postives = 103/143 (72.03%), Query Frame = 1 

Query: 8   QDRRLKALQAQNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTHGGTLR 67
           QD+RLK L  +NQ Q  PQKCPRC+SLNTKFCYYNNYSLSQPRY CKTCRRYWT GGTLR
Sbjct: 20  QDQRLKPLTGENQQQHPPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLR 79

Query: 68  NVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFSGTPVITPS 127
           NVPVGGGCRKGKR K SS S +NS SQPL  +P  Q  Q    T+P  +I S  P+I+ S
Sbjct: 80  NVPVGGGCRKGKRTKVSS-SGENSRSQPL--IPQQQAAQQHSLTSPQSMI-SSNPMISVS 139

Query: 128 SFFNPVGELGS--SSSWVNSFGS 149
           + F    E GS  SSS + S GS
Sbjct: 140 AAFR-TKESGSLASSSAIPSVGS 157

[Close]
BLAST of CmoCh07G002310 vs. NCBI nr
Match: gi|568826823|ref|XP_006467768.1| (PREDICTED: dof zinc finger protein DOF2.1-like [Citrus sinensis])

HSP 1 Score: 156.0 bits (393), Expect = 8.5e-35
Identity = 83/126 (65.87%), Postives = 90/126 (71.43%), Query Frame = 1 

Query: 5   RDDQDRRLKALQA-----QNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRY 64
           R  QDRRLK +Q      Q Q QPQPQKCPRC+SLNTKFCYYNNYSLSQPRY CKTCRRY
Sbjct: 26  RKQQDRRLKTMQGGTENQQQQEQPQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRY 85

Query: 65  WTHGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFS 124
           WT GGTLRNVPVGGGCRKGKR K SS S + S +   P  P P     +LTTT   ++ S
Sbjct: 86  WTQGGTLRNVPVGGGCRKGKRTKTSSVSGEASRASQPPQPPSPP--HPNLTTTQQNILSS 145

Query: 125 GTPVIT 126
             PVIT
Sbjct: 146 SNPVIT 149

[Close]
BLAST of CmoCh07G002310 vs. NCBI nr
Match: gi|641858928|gb|KDO77618.1| (hypothetical protein CISIN_1g042156mg [Citrus sinensis])

HSP 1 Score: 154.5 bits (389), Expect = 2.5e-34
Identity = 89/164 (54.27%), Postives = 103/164 (62.80%), Query Frame = 1 

Query: 5   RDDQDRRLKALQA-----QNQAQPQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRY 64
           R  QDRRLK +Q      Q Q QPQPQKCPRC+SLNTKFCYYNNYSLSQPRY CKTCRRY
Sbjct: 13  RKQQDRRLKTMQGGTENQQQQEQPQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRY 72

Query: 65  WTHGGTLRNVPVGGGCRKGKRPKQSSHSSDNSNSQPLPSLPLPQIVQSSLTTTPPPVIFS 124
           WT GGTLRNVPVGGGCRKGKR K SS S + S +   P  P P     +LTTT   ++ S
Sbjct: 73  WTQGGTLRNVPVGGGCRKGKRTKTSSVSGEASRASQPPQPPSPP--HPNLTTTQQNILSS 132

Query: 125 GTPVIT-----------PSSFFNPVGELGSSSSWVNSFGSSQGQ 153
             PVIT           P++    +G    S  +++S  + Q Q
Sbjct: 133 SNPVITTGPPVLRTKLEPAAASPSMGSYYPSGGFLSSLAAIQSQ 174

The following BLAST results are available for this feature:
BLAST of CmoCh07G002310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF54_ARATH1.6e-2564.37Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4 PE=2 SV=2[more]
PBF_MAIZE1.6e-2547.29Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1[more]
DOF14_ARATH1.0e-2469.62Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4 PE=2 SV=1[more]
DOF24_ARATH1.8e-2461.73Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1[more]
DOF53_ARATH3.0e-2460.22Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1[more]
BLAST of CmoCh07G002310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLH8_CUCSA1.0e-7972.65Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517940 PE=4 SV=1[more]
A0A0D2UNM9_GOSRA2.6e-3564.34Uncharacterized protein OS=Gossypium raimondii GN=B456_009G168400 PE=4 SV=1[more]
A0A067GD59_CITSI1.7e-3454.27Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042156mg PE=4 SV=1[more]
V4UEJ3_9ROSI5.0e-3453.70Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015879mg PE=4 SV=1[more]
A0A0B2QYB9_GLYSO2.5e-3340.29Dof zinc finger protein DOF5.3 OS=Glycine soja GN=glysoja_045887 PE=4 SV=1[more]
BLAST of CmoCh07G002310 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G60850.19.0e-2764.37 OBF binding protein 4[more]
AT1G28310.25.8e-2669.62 Dof-type zinc finger DNA-binding family protein[more]
AT2G37590.11.0e-2561.73 DNA binding with one finger 2.4[more]
AT5G60200.11.7e-2560.22 TARGET OF MONOPTEROS 6[more]
AT4G00940.11.7e-2553.21 Dof-type zinc finger DNA-binding family protein[more]
BLAST of CmoCh07G002310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434340|ref|XP_004134954.1|1.5e-7972.65PREDICTED: dof zinc finger protein DOF1.4-like [Cucumis sativus][more]
gi|659078665|ref|XP_008439844.1|1.6e-7870.97PREDICTED: dof zinc finger protein DOF1.4-like [Cucumis melo][more]
gi|823229938|ref|XP_012447707.1|3.8e-3564.34PREDICTED: dof zinc finger protein DOF1.2-like [Gossypium raimondii][more]
gi|568826823|ref|XP_006467768.1|8.5e-3565.87PREDICTED: dof zinc finger protein DOF2.1-like [Citrus sinensis][more]
gi|641858928|gb|KDO77618.1|2.5e-3454.27hypothetical protein CISIN_1g042156mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G002310.1CmoCh07G002310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 27..80
score: 2.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 25..80
score: 1.0
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 28..64
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 26..80
score: 28
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 16..238
score: 3.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G002310Cucsa.126800Cucumber (Gy14) v1cgycmoB0335
CmoCh07G002310Cla019706Watermelon (97103) v1cmowmB809
CmoCh07G002310Csa1G074960Cucumber (Chinese Long) v2cmocuB836
CmoCh07G002310MELO3C007275Melon (DHL92) v3.5.1cmomeB782
CmoCh07G002310MELO3C002616Melon (DHL92) v3.5.1cmomeB771
CmoCh07G002310ClCG03G008130Watermelon (Charleston Gray)cmowcgB760
CmoCh07G002310CSPI01G12230Wild cucumber (PI 183967)cmocpiB846
CmoCh07G002310Lsi02G007650Bottle gourd (USVL1VR-Ls)cmolsiB783
CmoCh07G002310Cp4.1LG19g07290Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G002310Cp4.1LG20g04350Cucurbita pepo (Zucchini)cmocpeB818
CmoCh07G002310MELO3C002616.2Melon (DHL92) v3.6.1cmomedB875
CmoCh07G002310CsaV3_1G012420Cucumber (Chinese Long) v3cmocucB0989
CmoCh07G002310CsaV3_6G050220Cucumber (Chinese Long) v3cmocucB1019
CmoCh07G002310Cla97C03G059430Watermelon (97103) v2cmowmbB857
CmoCh07G002310Cla97C01G022970Watermelon (97103) v2cmowmbB849
CmoCh07G002310CsGy6G034250Cucumber (Gy14) v2cgybcmoB843
CmoCh07G002310CsGy1G012250Cucumber (Gy14) v2cgybcmoB133
CmoCh07G002310Carg07776Silver-seed gourdcarcmoB0888
CmoCh07G002310Carg14618Silver-seed gourdcarcmoB0209
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh07G002310CmoCh13G006550Cucurbita moschata (Rifu)cmocmoB190
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G002310Cucurbita moschata (Rifu)cmocmoB036
CmoCh07G002310Cucurbita moschata (Rifu)cmocmoB349
CmoCh07G002310Cucurbita moschata (Rifu)cmocmoB400
CmoCh07G002310Cucurbita moschata (Rifu)cmocmoB459
CmoCh07G002310Cucurbita moschata (Rifu)cmocmoB444
CmoCh07G002310Cucumber (Gy14) v1cgycmoB0043
CmoCh07G002310Cucurbita maxima (Rimu)cmacmoB240
CmoCh07G002310Cucurbita maxima (Rimu)cmacmoB430
CmoCh07G002310Cucurbita maxima (Rimu)cmacmoB535
CmoCh07G002310Cucurbita maxima (Rimu)cmacmoB629
CmoCh07G002310Cucurbita maxima (Rimu)cmacmoB672
CmoCh07G002310Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G002310Wild cucumber (PI 183967)cmocpiB873
CmoCh07G002310Watermelon (Charleston Gray)cmowcgB755
CmoCh07G002310Cucumber (Chinese Long) v2cmocuB865
CmoCh07G002310Watermelon (97103) v1cmowmB816
CmoCh07G002310Cucurbita pepo (Zucchini)cmocpeB799
CmoCh07G002310Cucurbita pepo (Zucchini)cmocpeB801
CmoCh07G002310Cucurbita pepo (Zucchini)cmocpeB825
CmoCh07G002310Cucurbita pepo (Zucchini)cmocpeB826
CmoCh07G002310Bottle gourd (USVL1VR-Ls)cmolsiB774
CmoCh07G002310Melon (DHL92) v3.6.1cmomedB886
CmoCh07G002310Silver-seed gourdcarcmoB0046
CmoCh07G002310Silver-seed gourdcarcmoB0239
CmoCh07G002310Silver-seed gourdcarcmoB0745
CmoCh07G002310Silver-seed gourdcarcmoB1270
CmoCh07G002310Wax gourdcmowgoB1051
CmoCh07G002310Wax gourdcmowgoB1080