CmoCh07G002250 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G002250
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionAuxin-repressed protein
LocationCmo_Chr07 : 1136983 .. 1140904 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTGATGGCTTGCTCATCTTATTCTAAATTACTAAGTCATAAAGTTTTCGTTTTCTTCCTAAAGTAAATGGGAATAGCTTGGACGTTCTTTAGATGCAATTATCCCCAAATAGCTTCATTAATATCTTGGTTGGGGGATCTGGGGGAAAGGTGCCAGAACCATCCAGCCTCTTCACGCCCTGCTATCTCTCAGCAAAAAGGGGAACAACTGCAAAATGTTCATGAATGAAATCCACCCTCCCACTATGATGGACCTCCTATTAGTTAGGTTTATATAGAAATAAGAGAAGGGAAGTTGATGAGCACGTCATGTGAGTGAGGGTGTGAGCTTTATTAGGGTGTTGGACCCGGTTATTTGGAATGGGATTATTTTGTTAATAATACTATATACTCCGATTTAATGAGGGGGTATTTTTTGGCCAAGTGAGACGTGATATCAGGGAGTTCTCGAACTTTTCCTCGACCCCTGATAATCCCTTTGATTATCAATAGTAGAAAAGGTGGTTCTTTTCAAAACCAGATTTTGAAACAACTTAGACTCTCGATTCCCAGCTGGGAGAGACAAGTATGGAAGAGGTGAATAATGTGATATGCACCTGAAACTCTCAACCCACTCTAATCTCTTCTTTAAAGCAATTAATATTAGCTGCGATAGACTCAATCAATTGACACCTGAAGCTTTTTAAAAAACTATAGTCGATCTTGAACAGGTTAGAAATCAAGAGGCAATGTACATAGGGAATGGGAGAGTGCCATTCGTGAATTATAGATGATTAGCATAAAAGCCATTCCTACCTACCGCGATACCTTCCACAAAACCAGACTGAGACCCTTTCTTGAGCAGTCGGCTAAAGCAGTTCGCCATGAGCATACCTTGATGAATTTCCTCAGAAGATATATATTTCTCATTTCCTGCAATTGAATAAGAAAAGGAAATTATTATAAGAGATGCAGCTCCTGATCCACAATTTCTATCTAGAGAGAAAGCTCGTAGCCTTGAGAATGGCTAGAAGGAAATCCCAATCAACCCCGTCATAAGGTCTAGTTTAGAAGCCAGACCTTTCTCTTTTCTAGTCTTCACAATCTTGAAGAACCTCATAACCACAAATGTAGAACCAATAATTTGTCTCTAACCTACAAACTGCCAGAATCAATTATTTCTCTGACCAACAAAGCCGCCTGAATAAGGAAAGATTGTATGATTGTATCAGTCAAACAAGGCTTCAGCCTTTACATTAGAACTAAGCCTCAATCTTCTACCTCTAACTGACGTCTTTTAGGTTTGTTCCTGTGTAAGTGTTACCACTATTGTAATTGGATGTATAACCATCCCTTAAAAAGTCATATTAAGAGAAATATGGACTAAGGTTATTGCCTTGAACATGATTTATTCCATAGGTTGTCCAAATGTGTCTTTGAGTTTTAAGGAAATATTGGCTAAGGTCCTGCAGACATCCTATTTGATCCAGTGTATATTGTTCTCTATGGACGGGATCTATCTAGATGAACTCGAAACCAAAATTTATTAGAACTTTTCAATTTACGTTTTAATCAGTGCAAATCATTGAGTTCAATTGTTTTAAATATCACTATACTTTTAGCCTTTACATTGAAGAATGCTATTACATTTAGAGGACTGAATTGAAGGAATTGAATTGTTTGATTCAACATGTCATATATTTTAGACATCTGCCCTGAAAAAATCCTCGCCTGAGGACTTCATAACAAAGATTGAATTACGCCTTACCGGTTTATAAGCTCCATTGCTCAACAATGAATCGACTTCAGTGGCAAAAGGCTGTAGAATTAGGCAAGAGAGCATCGAATCAATGAGTTATTTCATGCCTTTTGGGCCTTGACTTTGCCTCTGTCGTGTACTTTTTCGCTTGCTTTATGGCATGTCACTTTGAAAGGGCATACAACAAAGAGGATTAGTTTGTTCCCATTTCACGGTTTGTTTTCTTGGTTTCCTTATAAACTGTATCCCTCCGTCTTATCTGTTGTTGCTACGATGAGTTTCTGTAAAATGAAATATTGAAACTGGGCACAGCTTTAACAGATACAAGTGCTTCTTTCAAGCATCTGGTACTGTAGATCAAAGAAACCGCTGGTGAGTTCTTGAAGTTCCCAGTCTCATTTGTTTATTACTCAACGGTGACCTGTTTCCTTTTAACAATTGAGATAGAATGGAAAACATCAATGTTAGGCTGCTCTGAATTATCACCCCATTTTTCACATTCATGAGCCACTTAAAAGTCTTTTAGCTAACTCCACCAGATAAAAGTTTCCCAAGTTCCCATCCATGAATTGGCTAGATTAAGAGCTCCATCGATTATGGCATGCCTTGAGCCTTGATGTATTATTTGAAGCATATAACCCAAGAAAAGATAAAAGAAAAGGTAAGAAGATCAACTGATATTATTATCATATTCTGCATTTTCTTTACTTGAGTTCGATCTTGAATGGCATGAACAACTGAAACAAAATCTGGGCCGTTGAACATCGAAGAACAAAGTCATTGCAGGGGGCCCCAGTCGTCCGGGAGAAATCGGACAAAACCAGTTTTTTAATAGCAGCTGAGATTCCACTTGTACAGCAACCCGTAACCTGCTCCTGTAACTATATAATATCTCGAGCAGATATTTTTTTTCCTTTCTGTCACCATTTTTACTCAGTCTTCATCCTTATCCATTTGCCTTCATTATATTTTAATTCCAGCTGATCATTTTTATATTGCCAGCTATGCTTCAAGTCTTCTAGTTTACGCTATCGAACCATTTCTTGGCTGTCAGTTTTTAAGGATAAATTGGGATAAAAGCTGACGAGTTTAGTTGGTGAAGTTTATATGGTCATATTCTTATTATGGACACTATGTTTCGTAAGTTTACGGTTAATTTTAAAATGTAACTCTCGATGGTTACCTTTAGCTCTAAGTTGTCTCGAGAAAGATAAAACTTTGAGGAATCTTTTATATTAGAAAAATGATGGGAAATAAAGACGAACTATACACACTTTGAGCCCTCAGAGCTCTATTTATATAACCCATATATGACTATGAAATTGGGTTCTAAGTAAGTGAGGGAGTGAACTCAACAAACATGGTTCTGCTTGAGAAGCTTTGGGATGATGTTGTGGCCGGACCTCAGCCTGACCGCGGCCTCGGCAAGCTCAGGAAGATCAAGCCCTTGGTCGTTAAAGGTAACCCTTTTTGTTCATTTTCTTTTTCTTTTGAATCTTGTTGATTGTTTTCGTTTAGTATAAATTCTTGTTGATTATTGTCACTTTTACTAGTAGTTGGCTGCTTGTTTTTATGATTTACATCAACTTGTAACTATGATGTTTTCGGGATGGGTTTAGATTTGGATGGTGAGGGAAGCAAACACCAGAGCCAGATGTCGCCGGCTACACCGGTGACACCTACAACGCCGTTTACGGCGGCGCGTAAGGATAATGTTTGGAGGAGCGTCTTCAACCCTGGTAGAAACTTTGCCACTAAGACTATTGGTGCTGAAGTCTTCGACAAGCCTCAACCCAACTCTCCGACTGTTTACGACTGGTGTGTACCGCCACTTTCCAACCTTTAAATTGGAGCATATGTATAATCCACGCGCCGATCTAACTGAAAAATACCTTTAAAAAAAAAAAAAAAAAATCTAGTAATGAAGAAATGAAATCGAAATCTGGGGGCATCTCGTCCTCCATATTCCCAACAGTTGATGGGGGATAAAAAGATTCCAAATTTTGATTCTTTGATATTCCGGAGTGAGATGATCTAAGCCGTTAGTTCGGTGGACCTTCATCATGGTCCGGACATCTTGGGGCTTGATTGGCTCTCTATTTTTGTCTACATCGATCAAAACTGATACTGTTACTTTGTGATTACAGGCTCTACAGCGGTGATACCAGAAGCGAGCACCGCTAA

mRNA sequence

CCTGATGGCTTGCTCATCTTATTCTAAATTACTAAGTCATAAAGTTTTCGTTTTCTTCCTAAAGTAAATGGGAATAGCTTGGACGTTCTTTAGATGCAATTATCCCCAAATAGCTTCATTAATATCTTGGTTGGGGGATCTGGGGGAAAGGTGCCAGAACCATCCAGCCTCTTCACGCCCTGCTATCTCTCAGCAAAAAGGGGAACAACTGCAAAATGTTCATGAATGAAATCCACCCTCCCACTATGATGGACCTCCTATTAGTTAGGTTTATATAGAAATAAGAGAAGGGAAGTTGATGAGCACGTCATGTGAGTGAGGGTGTGAGCTTTATTAGGGTGTTGGACCCGGTTATTTGGAATGGGATTATTTTGTTAATAATACTATATACTCCGATTTAATGAGGGGGTATTTTTTGGCCAAGTGAGACGTGATATCAGGGAGTTCTCGAACTTTTCCTCGACCCCTGATAATCCCTTTGATTATCAATAGTAGAAAAGGTGGTTCTTTTCAAAACCAGATTTTGAAACAACTTAGACTCTCGATTCCCAGCTGGGAGAGACAAGTATGGAAGAGGTGAATAATGTGATATGCACCTGAAACTCTCAACCCACTCTAATCTCTTCTTTAAAGCAATTAATATTAGCTGCGATAGACTCAATCAATTGACACCTGAAGCTTTTTAAAAAACTATAGTCGATCTTGAACAGGTTAGAAATCAAGAGGCAATGTACATAGGGAATGGGAGAGTGCCATTCGTGAATTATAGATGATTAGCATAAAAGCCATTCCTACCTACCGCGATACCTTCCACAAAACCAGACTGAGACCCTTTCTTGAGCAGTCGGCTAAAGCAGTTCGCCATGAGCATACCTTGATGAATTTCCTCAGAAGATATATATTTCTCATTTCCTGCAATTGAATAAGAAAAGGAAATTATTATAAGAGATGCAGCTCCTGATCCACAATTTCTATCTAGAGAGAAAGCTCGTAGCCTTGAGAATGGCTAGAAGGAAATCCCAATCAACCCCGTCATAAGGTCTAGTTTAGAAGCCAGACCTTTCTCTTTTCTAGTCTTCACAATCTTGAAGAACCTCATAACCACAAATGTAGAACCAATAATTTGTCTCTAACCTACAAACTGCCAGAATCAATTATTTCTCTGACCAACAAAGCCGCCTGAATAAGGAAAGATTGTATGATTGTATCAGTCAAACAAGGCTTCAGCCTTTACATTAGAACTAAGCCTCAATCTTCTACCTCTAACTGACGTCTTTTAGGTTTGTTCCTGTGTAAGTGTTACCACTATTGTAATTGGATGTATAACCATCCCTTAAAAAGTCATATTAAGAGAAATATGGACTAAGGTTATTGCCTTGAACATGATTTATTCCATAGGTTGTCCAAATGTGTCTTTGAGTTTTAAGGAAATATTGGCTAAGGTCCTGCAGACATCCTATTTGATCCAGTGTATATTGTTCTCTATGGACGGGATCTATCTAGATGAACTCGAAACCAAAATTTATTAGAACTTTTCAATTTACGTTTTAATCAGTGCAAATCATTGAGTTCAATTGTTTTAAATATCACTATACTTTTAGCCTTTACATTGAAGAATGCTATTACATTTAGAGGACTGAATTGAAGGAATTGAATTGTTTGATTCAACATGTCATATATTTTAGACATCTGCCCTGAAAAAATCCTCGCCTGAGGACTTCATAACAAAGATTGAATTACGCCTTACCGGTTTATAAGCTCCATTGCTCAACAATGAATCGACTTCAGTGGCAAAAGGCTGTAGAATTAGGCAAGAGAGCATCGAATCAATGAGTTATTTCATGCCTTTTGGGCCTTGACTTTGCCTCTGTCGTGTACTTTTTCGCTTGCTTTATGGCATGTCACTTTGAAAGGGCATACAACAAAGAGGATTAGTTTGTTCCCATTTCACGGTTTGTTTTCTTGGTTTCCTTATAAACTGTATCCCTCCGTCTTATCTGTTGTTGCTACGATGAGTTTCTGTAAAATGAAATATTGAAACTGGGCACAGCTTTAACAGATACAAGTGCTTCTTTCAAGCATCTGGTACTGTAGATCAAAGAAACCGCTGGTGAGTTCTTGAAGTTCCCAGTCTCATTTGTTTATTACTCAACGGTGACCTGTTTCCTTTTAACAATTGAGATAGAATGGAAAACATCAATGTTAGGCTGCTCTGAATTATCACCCCATTTTTCACATTCATGAGCCACTTAAAAGTCTTTTAGCTAACTCCACCAGATAAAAGTTTCCCAAGTTCCCATCCATGAATTGGCTAGATTAAGAGCTCCATCGATTATGGCATGCCTTGAGCCTTGATGTATTATTTGAAGCATATAACCCAAGAAAAGATAAAAGAAAAGGTAAGAAGATCAACTGATATTATTATCATATTCTGCATTTTCTTTACTTGAGTTCGATCTTGAATGGCATGAACAACTGAAACAAAATCTGGGCCGTTGAACATCGAAGAACAAAGTCATTGCAGGGGGCCCCAGTCGTCCGGGAGAAATCGGACAAAACCAGTTTTTTAATAGCAGCTGAGATTCCACTTGTACAGCAACCCGTAACCTGCTCCTGTAACTATATAATATCTCGAGCAGATATTTTTTTTCCTTTCTGTCACCATTTTTACTCAGTCTTCATCCTTATCCATTTGCCTTCATTATATTTTAATTCCAGCTGATCATTTTTATATTGCCAGCTATGCTTCAAGTCTTCTAGTTTACGCTATCGAACCATTTCTTGGCTGTCAGTTTTTAAGGATAAATTGGGATAAAAGCTGACGAGTTTAGTTGGTGAAGTTTATATGGTCATATTCTTATTATGGACACTATGTTTCGTAAGTTTACGGTTAATTTTAAAATGTAACTCTCGATGGTTACCTTTAGCTCTAAGTTGTCTCGAGAAAGATAAAACTTTGAGGAATCTTTTATATTAGAAAAATGATGGGAAATAAAGACGAACTATACACACTTTGAGCCCTCAGAGCTCTATTTATATAACCCATATATGACTATGAAATTGGGTTCTAAGTAAGTGAGGGAGTGAACTCAACAAACATGGTTCTGCTTGAGAAGCTTTGGGATGATGTTGTGGCCGGACCTCAGCCTGACCGCGGCCTCGGCAAGCTCAGGAAGATCAAGCCCTTGGTCGTTAAAGATTTGGATGGTGAGGGAAGCAAACACCAGAGCCAGATGTCGCCGGCTACACCGGTGACACCTACAACGCCGTTTACGGCGGCGCGTAAGGATAATGTTTGGAGGAGCGTCTTCAACCCTGGTAGAAACTTTGCCACTAAGACTATTGGTGCTGAAGTCTTCGACAAGCCTCAACCCAACTCTCCGACTGTTTACGACTGGCTCTACAGCGGTGATACCAGAAGCGAGCACCGCTAA

Coding sequence (CDS)

ATGGTTCTGCTTGAGAAGCTTTGGGATGATGTTGTGGCCGGACCTCAGCCTGACCGCGGCCTCGGCAAGCTCAGGAAGATCAAGCCCTTGGTCGTTAAAGATTTGGATGGTGAGGGAAGCAAACACCAGAGCCAGATGTCGCCGGCTACACCGGTGACACCTACAACGCCGTTTACGGCGGCGCGTAAGGATAATGTTTGGAGGAGCGTCTTCAACCCTGGTAGAAACTTTGCCACTAAGACTATTGGTGCTGAAGTCTTCGACAAGCCTCAACCCAACTCTCCGACTGTTTACGACTGGCTCTACAGCGGTGATACCAGAAGCGAGCACCGCTAA
Homology
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BLAST of CmoCh07G002250 vs. Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.6e-39
Identity = 77/111 (69.37%), Postives = 94/111 (84.68%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKI-KPLVVKDLDGEGSKHQSQMSPATPVTPTTPFT 60
           MVLL+KLWDD+VAGPQP+RGLG LRK+ +PL +KD +GE SK     +P TPVTPTTP  
Sbjct: 1   MVLLDKLWDDIVAGPQPERGLGMLRKVPQPLNLKD-EGESSKITMPTTPTTPVTPTTPI- 60

Query: 61  AARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTRSEH 111
           +ARKDNVWRSVF+PG N ++KT+G +VFD PQPNSPTVYDW+YSG+TRS+H
Sbjct: 61  SARKDNVWRSVFHPGSNLSSKTMGNQVFDSPQPNSPTVYDWMYSGETRSKH 109

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BLAST of CmoCh07G002250 vs. Swiss-Prot
Match: DRM1_PEA (Dormancy-associated protein 1 OS=Pisum sativum GN=DRM1 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-36
Identity = 73/115 (63.48%), Postives = 87/115 (75.65%), Query Frame = 1 

Query: 3   LLEKLWDDVVAGPQPDRGLGKLRKIKPLVVKDLDGEGSKHQSQMS------PATPVTPTT 62
           +L+KLWDD+VAGPQP+RGL KLRK+       L  +G+ +Q   S      P TPVTPTT
Sbjct: 1   MLDKLWDDIVAGPQPERGLEKLRKL----TTTLKDDGASNQLMRSTSIPTTPTTPVTPTT 60

Query: 63  PFTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTRSEHR 112
           P +A + DNVWRSVFNPG N ATK+IGA VFDKP PN+PTVYDW+YSGDTRS+HR
Sbjct: 61  PSSARKVDNVWRSVFNPGSNSATKSIGAHVFDKPLPNTPTVYDWMYSGDTRSKHR 111

[Close]
BLAST of CmoCh07G002250 vs. Swiss-Prot
Match: DRM1_ARATH (Dormancy-associated protein 1 OS=Arabidopsis thaliana GN=DRM1 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-32
Identity = 76/123 (61.79%), Postives = 90/123 (73.17%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKI--KPLVVKDLDGEGSK-----HQS-----QMSP 60
           MVLLEKLWDDVVAGPQPDRGLG+LRKI  +P+ ++D+ GEGS      H+S      +SP
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDI-GEGSSSKVVMHRSLTMPAAVSP 60

Query: 61  ATPVTPTTPFTAARKDNVWRSVFNPGRNFATKTIGAEVFDKP-QPNSPTVYDWLYSGDTR 111
            TP TPTTP T  RKDNVWRSVFNPG N AT+ IG+ +FDKP  PNSP+VYD + +   R
Sbjct: 61  GTPTTPTTP-TTPRKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDCVDNEAQR 120

[Close]
BLAST of CmoCh07G002250 vs. Swiss-Prot
Match: DRMH1_ARATH (Dormancy-associated protein homolog 1 OS=Arabidopsis thaliana GN=DRMH1 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 7.8e-28
Identity = 64/110 (58.18%), Postives = 83/110 (75.45%), Query Frame = 1 

Query: 7   LWDDVVAGPQPDRGLGKLRK---IKPLVVKDLDGEGSKHQSQMSPA-TPVTPTTPFTAAR 66
           +WD+ VAGP+P+ GLG+LR     +PL +K + GEGS  ++  + A +P TPTTP  +AR
Sbjct: 1   MWDETVAGPKPEHGLGRLRNKITTQPLDIKGV-GEGSSSKTVAAVAGSPGTPTTP-GSAR 60

Query: 67  KDNVWRSVFNPGRNFATKTIGAEVFDKP-QPNSPTVYDWLYSGDTRSEHR 112
           K+NVWRSVF+PG N AT+ +G  +FDKP  PNSPTVYDWLYS DTRS+HR
Sbjct: 61  KENVWRSVFHPGSNIATRGMGTNLFDKPSHPNSPTVYDWLYSDDTRSKHR 108

[Close]
BLAST of CmoCh07G002250 vs. Swiss-Prot
Match: DRMH2_ARATH (Dormancy-associated protein homolog 2 OS=Arabidopsis thaliana GN=DRMH2 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-25
Identity = 64/115 (55.65%), Postives = 78/115 (67.83%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRG-LGKLRKIKP-LVVKDLDGEGSKHQSQMS-PATPVTPTTP 60
           M +LE LWDDVVAGP+P+ G  G LR+I   L   +   EG      +S PA+P TP TP
Sbjct: 1   MGVLENLWDDVVAGPRPEAGGRGHLRRISTSLTSLNNTTEGMSVAGSVSLPASPATPVTP 60

Query: 61  FTAARKDNVWRSVFNPGRNFATKTIGAEVFDKP-QPNSPTVYDWLYSGDTRSEHR 112
             + RK +VWRSVF+P  N  T+ IGA VFDKP  PNSPTVYDW+YS +TRS+HR
Sbjct: 61  -GSGRKVDVWRSVFHPASNVTTREIGANVFDKPSHPNSPTVYDWMYSNETRSKHR 114

[Close]
BLAST of CmoCh07G002250 vs. TrEMBL
Match: D1MWZ6_CITLA (Auxin-repressed protein OS=Citrullus lanatus subsp. vulgaris GN=CitAuR PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 3.9e-50
Identity = 99/120 (82.50%), Postives = 106/120 (88.33%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKI--KPLVVKDLDGEGSKHQSQMS-------PATP 60
           MVLLEKLWDDVVAGPQPDRGLGKLRKI  KP ++KDL+GEGSK+Q  MS       P TP
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTP 60

Query: 61  VTPTTPFTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTRSEHR 112
           VTPTTP TAARKDNVWRSVFNPGRNFATK+IGAEVFDKPQPNSPTVYDWLYSGDT+S+HR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQPNSPTVYDWLYSGDTKSQHR 120

[Close]
BLAST of CmoCh07G002250 vs. TrEMBL
Match: A0A0A0KI43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518000 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-47
Identity = 95/120 (79.17%), Postives = 103/120 (85.83%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKI--KPLVVKDLDGEGSKHQ-------SQMSPATP 60
           MVLLE LWDDV AGPQP RGLGKLRK+  KPLVVKDL+G+GSK+Q       S  +P TP
Sbjct: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60

Query: 61  VTPTTPFTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTRSEHR 112
           VTP TP TAARKDNVWRSVFNPGRNFATKTIGA+VFDKPQPNSPTVYDWLYSGDT+S+HR
Sbjct: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120

[Close]
BLAST of CmoCh07G002250 vs. TrEMBL
Match: G8FGP3_ELAGV (Auxin-repressed protein OS=Elaeis guineensis var. tenera GN=ARP PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.5e-41
Identity = 91/124 (73.39%), Postives = 99/124 (79.84%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKI--KPLVVK-DLDGEGSKHQSQMS---------- 60
           MVLLEKLWDDVVAGPQPDRGLGKLRK+  KPLV+K D +GE SK+Q  +S          
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKLSTKPLVIKADGEGESSKYQRSISMPTTPTTPGT 60

Query: 61  PATPVTPTTPFTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTR 112
           PATP TPTTP ++ARK NVWRSVFNPG N ATKTIGA  FDKPQPNSPTVYDWLYSG+TR
Sbjct: 61  PATPATPTTP-SSARKANVWRSVFNPGSNLATKTIGANYFDKPQPNSPTVYDWLYSGETR 120

[Close]
BLAST of CmoCh07G002250 vs. TrEMBL
Match: U5DH09_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00062p00206330 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 7.3e-41
Identity = 88/120 (73.33%), Postives = 95/120 (79.17%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKI--KPLVVKDLDGEGSKHQSQMS-----PATPVT 60
           MVLLEKLWDDV+AGPQPD+GLGKLRK+  K L VKD+ GEG    S+       P TP T
Sbjct: 1   MVLLEKLWDDVLAGPQPDQGLGKLRKLSTKALSVKDVGGEGEGSNSKFGRSLSMPGTPPT 60

Query: 61  PTTPFT--AARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTRSEHR 112
           P TP T  +A+KDNVWRSVFNPG N ATKTIGAEVFDKPQPNSPTVYDWLYSGDTRS HR
Sbjct: 61  PGTPMTPGSAKKDNVWRSVFNPGSNLATKTIGAEVFDKPQPNSPTVYDWLYSGDTRSRHR 120

[Close]
BLAST of CmoCh07G002250 vs. TrEMBL
Match: M5WI12_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013510mg PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.6e-40
Identity = 85/119 (71.43%), Postives = 97/119 (81.51%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKI--KPLVVKDLDGE---GSKHQSQMSPATPVTPT 60
           MVLLEKLWDD+VAGPQP+RGLGKLRK+  KPL +KD++GE    SK    MSP TPVTP 
Sbjct: 1   MVLLEKLWDDIVAGPQPERGLGKLRKVTPKPLNIKDVEGETSSSSKLAMPMSPGTPVTPG 60

Query: 61  TPFTAAR---KDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTRSEHR 112
           TP T A    KDNVWRSVF+PG N AT+T+G +VFDKPQPNSPTVYDWLYSG+TRS+HR
Sbjct: 61  TPVTPASARAKDNVWRSVFHPGSNLATRTMGNQVFDKPQPNSPTVYDWLYSGETRSKHR 119

[Close]
BLAST of CmoCh07G002250 vs. TAIR10
Match: AT1G28330.5 (AT1G28330.5 dormancy-associated protein-like 1)

HSP 1 Score: 139.8 bits (351), Expect = 1.0e-33
Identity = 76/123 (61.79%), Postives = 90/123 (73.17%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKI--KPLVVKDLDGEGSK-----HQS-----QMSP 60
           MVLLEKLWDDVVAGPQPDRGLG+LRKI  +P+ ++D+ GEGS      H+S      +SP
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDI-GEGSSSKVVMHRSLTMPAAVSP 60

Query: 61  ATPVTPTTPFTAARKDNVWRSVFNPGRNFATKTIGAEVFDKP-QPNSPTVYDWLYSGDTR 111
            TP TPTTP T  RKDNVWRSVFNPG N AT+ IG+ +FDKP  PNSP+VYD + +   R
Sbjct: 61  GTPTTPTTP-TTPRKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDCVDNEAQR 120

[Close]
BLAST of CmoCh07G002250 vs. TAIR10
Match: AT2G33830.2 (AT2G33830.2 Dormancy/auxin associated family protein)

HSP 1 Score: 124.4 bits (311), Expect = 4.4e-29
Identity = 64/110 (58.18%), Postives = 83/110 (75.45%), Query Frame = 1 

Query: 7   LWDDVVAGPQPDRGLGKLRK---IKPLVVKDLDGEGSKHQSQMSPA-TPVTPTTPFTAAR 66
           +WD+ VAGP+P+ GLG+LR     +PL +K + GEGS  ++  + A +P TPTTP  +AR
Sbjct: 1   MWDETVAGPKPEHGLGRLRNKITTQPLDIKGV-GEGSSSKTVAAVAGSPGTPTTP-GSAR 60

Query: 67  KDNVWRSVFNPGRNFATKTIGAEVFDKP-QPNSPTVYDWLYSGDTRSEHR 112
           K+NVWRSVF+PG N AT+ +G  +FDKP  PNSPTVYDWLYS DTRS+HR
Sbjct: 61  KENVWRSVFHPGSNIATRGMGTNLFDKPSHPNSPTVYDWLYSDDTRSKHR 108

[Close]
BLAST of CmoCh07G002250 vs. TAIR10
Match: AT5G44300.1 (AT5G44300.1 Dormancy/auxin associated family protein)

HSP 1 Score: 115.9 bits (289), Expect = 1.6e-26
Identity = 64/115 (55.65%), Postives = 78/115 (67.83%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRG-LGKLRKIKP-LVVKDLDGEGSKHQSQMS-PATPVTPTTP 60
           M +LE LWDDVVAGP+P+ G  G LR+I   L   +   EG      +S PA+P TP TP
Sbjct: 1   MGVLENLWDDVVAGPRPEAGGRGHLRRISTSLTSLNNTTEGMSVAGSVSLPASPATPVTP 60

Query: 61  FTAARKDNVWRSVFNPGRNFATKTIGAEVFDKP-QPNSPTVYDWLYSGDTRSEHR 112
             + RK +VWRSVF+P  N  T+ IGA VFDKP  PNSPTVYDW+YS +TRS+HR
Sbjct: 61  -GSGRKVDVWRSVFHPASNVTTREIGANVFDKPSHPNSPTVYDWMYSNETRSKHR 114

[Close]
BLAST of CmoCh07G002250 vs. NCBI nr
Match: gi|659078641|ref|XP_008439831.1| (PREDICTED: auxin-repressed 12.5 kDa protein-like [Cucumis melo])

HSP 1 Score: 205.7 bits (522), Expect = 4.2e-50
Identity = 100/120 (83.33%), Postives = 106/120 (88.33%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKI--KPLVVKDLDGEGSKHQSQMS-------PATP 60
           MVLLEKLWDDVVAGPQP RGLGKLRK+  KPL+VKDL+G+GSK+Q  MS       P TP
Sbjct: 1   MVLLEKLWDDVVAGPQPVRGLGKLRKVSTKPLIVKDLEGDGSKYQRSMSMPASPGTPTTP 60

Query: 61  VTPTTPFTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTRSEHR 112
           VTPTTP TAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDT+SEHR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTKSEHR 120

[Close]
BLAST of CmoCh07G002250 vs. NCBI nr
Match: gi|270309006|dbj|BAI52956.1| (auxin-repressed protein [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 205.3 bits (521), Expect = 5.5e-50
Identity = 99/120 (82.50%), Postives = 106/120 (88.33%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKI--KPLVVKDLDGEGSKHQSQMS-------PATP 60
           MVLLEKLWDDVVAGPQPDRGLGKLRKI  KP ++KDL+GEGSK+Q  MS       P TP
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTP 60

Query: 61  VTPTTPFTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTRSEHR 112
           VTPTTP TAARKDNVWRSVFNPGRNFATK+IGAEVFDKPQPNSPTVYDWLYSGDT+S+HR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQPNSPTVYDWLYSGDTKSQHR 120

[Close]
BLAST of CmoCh07G002250 vs. NCBI nr
Match: gi|449433824|ref|XP_004134697.1| (PREDICTED: auxin-repressed 12.5 kDa protein [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 2.6e-47
Identity = 95/120 (79.17%), Postives = 103/120 (85.83%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKI--KPLVVKDLDGEGSKHQ-------SQMSPATP 60
           MVLLE LWDDV AGPQP RGLGKLRK+  KPLVVKDL+G+GSK+Q       S  +P TP
Sbjct: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60

Query: 61  VTPTTPFTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTRSEHR 112
           VTP TP TAARKDNVWRSVFNPGRNFATKTIGA+VFDKPQPNSPTVYDWLYSGDT+S+HR
Sbjct: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120

[Close]
BLAST of CmoCh07G002250 vs. NCBI nr
Match: gi|720052356|ref|XP_010272386.1| (PREDICTED: auxin-repressed 12.5 kDa protein-like [Nelumbo nucifera])

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-42
Identity = 88/120 (73.33%), Postives = 101/120 (84.17%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKI--KPLVVKDLDGEGSKHQSQMS-------PATP 60
           MVLLEKLWDDVVAGPQPD GLGKLRK+  +PL +KD +GEGSK+Q  +S       P+TP
Sbjct: 1   MVLLEKLWDDVVAGPQPDNGLGKLRKLTTRPLNLKDAEGEGSKYQRSLSMPASPATPSTP 60

Query: 61  VTPTTPFTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTRSEHR 112
           VTP+TP T +RKDNVWRSVFNPG N ATK++G E+FDKPQPNSPTVYDWLYSGDTRS+HR
Sbjct: 61  VTPSTPST-SRKDNVWRSVFNPGSNLATKSLGTEMFDKPQPNSPTVYDWLYSGDTRSKHR 119

[Close]
BLAST of CmoCh07G002250 vs. NCBI nr
Match: gi|743864099|ref|XP_010943947.1| (PREDICTED: auxin-repressed 12.5 kDa protein-like [Elaeis guineensis])

HSP 1 Score: 176.0 bits (445), Expect = 3.6e-41
Identity = 91/124 (73.39%), Postives = 99/124 (79.84%), Query Frame = 1 

Query: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKI--KPLVVK-DLDGEGSKHQSQMS---------- 60
           MVLLEKLWDDVVAGPQPDRGLGKLRK+  KPLV+K D +GE SK+Q  +S          
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKLSTKPLVIKADGEGESSKYQRSISMPTTPTTPGT 60

Query: 61  PATPVTPTTPFTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTR 112
           PATP TPTTP ++ARK NVWRSVFNPG N ATKTIGA  FDKPQPNSPTVYDWLYSG+TR
Sbjct: 61  PATPATPTTP-SSARKANVWRSVFNPGSNLATKTIGANYFDKPQPNSPTVYDWLYSGETR 120

The following BLAST results are available for this feature:
BLAST of CmoCh07G002250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
12KD_FRAAN2.6e-3969.37Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1[more]
DRM1_PEA3.5e-3663.48Dormancy-associated protein 1 OS=Pisum sativum GN=DRM1 PE=2 SV=1[more]
DRM1_ARATH1.8e-3261.79Dormancy-associated protein 1 OS=Arabidopsis thaliana GN=DRM1 PE=1 SV=1[more]
DRMH1_ARATH7.8e-2858.18Dormancy-associated protein homolog 1 OS=Arabidopsis thaliana GN=DRMH1 PE=1 SV=1[more]
DRMH2_ARATH2.8e-2555.65Dormancy-associated protein homolog 2 OS=Arabidopsis thaliana GN=DRMH2 PE=3 SV=1[more]
BLAST of CmoCh07G002250 vs. TrEMBL
Match NameE-valueIdentityDescription
D1MWZ6_CITLA3.9e-5082.50Auxin-repressed protein OS=Citrullus lanatus subsp. vulgaris GN=CitAuR PE=2 SV=1[more]
A0A0A0KI43_CUCSA1.8e-4779.17Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518000 PE=4 SV=1[more]
G8FGP3_ELAGV2.5e-4173.39Auxin-repressed protein OS=Elaeis guineensis var. tenera GN=ARP PE=2 SV=1[more]
U5DH09_AMBTC7.3e-4173.33Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00062p00206330 PE=4 SV=... [more]
M5WI12_PRUPE3.6e-4071.43Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013510mg PE=4 SV=1[more]
BLAST of CmoCh07G002250 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G28330.51.0e-3361.79 dormancy-associated protein-like 1[more]
AT2G33830.24.4e-2958.18 Dormancy/auxin associated family protein[more]
AT5G44300.11.6e-2655.65 Dormancy/auxin associated family protein[more]
BLAST of CmoCh07G002250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659078641|ref|XP_008439831.1|4.2e-5083.33PREDICTED: auxin-repressed 12.5 kDa protein-like [Cucumis melo][more]
gi|270309006|dbj|BAI52956.1|5.5e-5082.50auxin-repressed protein [Citrullus lanatus subsp. vulgaris][more]
gi|449433824|ref|XP_004134697.1|2.6e-4779.17PREDICTED: auxin-repressed 12.5 kDa protein [Cucumis sativus][more]
gi|720052356|ref|XP_010272386.1|1.1e-4273.33PREDICTED: auxin-repressed 12.5 kDa protein-like [Nelumbo nucifera][more]
gi|743864099|ref|XP_010943947.1|3.6e-4173.39PREDICTED: auxin-repressed 12.5 kDa protein-like [Elaeis guineensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008406DRM/ARP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G002250.1CmoCh07G002250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008406Dormancy/auxin associated proteinPFAMPF05564Auxin_repressedcoord: 7..111
score: 1.6
NoneNo IPR availablePANTHERPTHR33565FAMILY NOT NAMEDcoord: 2..111
score: 2.7
NoneNo IPR availablePANTHERPTHR33565:SF2SUBFAMILY NOT NAMEDcoord: 2..111
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G002250Cucsa.126840Cucumber (Gy14) v1cgycmoB0335
CmoCh07G002250Cucsa.046350Cucumber (Gy14) v1cgycmoB0043
CmoCh07G002250CmaCh18G003830Cucurbita maxima (Rimu)cmacmoB430
CmoCh07G002250CmaCh03G012810Cucurbita maxima (Rimu)cmacmoB672
CmoCh07G002250CmaCh07G002300Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G002250Cla019703Watermelon (97103) v1cmowmB809
CmoCh07G002250Cla009633Watermelon (97103) v1cmowmB816
CmoCh07G002250Csa1G075000Cucumber (Chinese Long) v2cmocuB836
CmoCh07G002250Csa6G518000Cucumber (Chinese Long) v2cmocuB865
CmoCh07G002250MELO3C002620Melon (DHL92) v3.5.1cmomeB771
CmoCh07G002250MELO3C007269Melon (DHL92) v3.5.1cmomeB782
CmoCh07G002250ClCG01G023140Watermelon (Charleston Gray)cmowcgB755
CmoCh07G002250ClCG03G008090Watermelon (Charleston Gray)cmowcgB760
CmoCh07G002250CSPI06G34780Wild cucumber (PI 183967)cmocpiB873
CmoCh07G002250CSPI01G12270Wild cucumber (PI 183967)cmocpiB846
CmoCh07G002250Lsi01G003000Bottle gourd (USVL1VR-Ls)cmolsiB774
CmoCh07G002250Lsi02G007710Bottle gourd (USVL1VR-Ls)cmolsiB783
CmoCh07G002250Cp4.1LG09g08310Cucurbita pepo (Zucchini)cmocpeB799
CmoCh07G002250Cp4.1LG10g05040Cucurbita pepo (Zucchini)cmocpeB801
CmoCh07G002250Cp4.1LG19g07150Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G002250MELO3C002620.2Melon (DHL92) v3.6.1cmomedB875
CmoCh07G002250MELO3C007269.2Melon (DHL92) v3.6.1cmomedB886
CmoCh07G002250CsaV3_1G012460Cucumber (Chinese Long) v3cmocucB0989
CmoCh07G002250CsaV3_6G050280Cucumber (Chinese Long) v3cmocucB1019
CmoCh07G002250Cla97C03G059380Watermelon (97103) v2cmowmbB857
CmoCh07G002250Cla97C01G023030Watermelon (97103) v2cmowmbB849
CmoCh07G002250Bhi08G001870Wax gourdcmowgoB1074
CmoCh07G002250Bhi03G000301Wax gourdcmowgoB1051
CmoCh07G002250CsGy1G012300Cucumber (Gy14) v2cgybcmoB133
CmoCh07G002250Carg15304Silver-seed gourdcarcmoB0745
CmoCh07G002250Carg14615Silver-seed gourdcarcmoB0209
CmoCh07G002250Carg07772Silver-seed gourdcarcmoB0888
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh07G002250CmoCh18G003640Cucurbita moschata (Rifu)cmocmoB349
CmoCh07G002250CmoCh03G012750Cucurbita moschata (Rifu)cmocmoB459
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G002250Cucurbita pepo (Zucchini)cmocpeB818
CmoCh07G002250Cucumber (Gy14) v2cgybcmoB843
CmoCh07G002250Silver-seed gourdcarcmoB0239
CmoCh07G002250Silver-seed gourdcarcmoB1270
CmoCh07G002250Wax gourdcmowgoB1080
CmoCh07G002250Cucurbita moschata (Rifu)cmocmoB190
CmoCh07G002250Cucurbita moschata (Rifu)cmocmoB400
CmoCh07G002250Cucurbita maxima (Rimu)cmacmoB240
CmoCh07G002250Cucurbita maxima (Rimu)cmacmoB535