CmoCh07G002140 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G002140
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Optic atrophy 3 protein (OPA3)
Location	Cmo_Chr07 : 1069075 .. 1072296 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATATGGGGAAAATAATTTTCGGAATTCCCTCGTCAAATATTGCTCGCGGGAAACCTAAACCATTTGCCAATTTGGCGACTTCGCTCCAACGGTTCCTCGATCGCAAATGGCTTGTCTTCATCTTCTCTGACTATTCAATTCGTTGACATTCATTGGCTCTGACCGTGTGTTGTTAATTCCCGAAGAACAGCAAAAGCGAAGCCTTCGAATCAGATTACCGAATTTATTCGTTGTAGTCATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTAGCCCAGGTATTTATAATTTCGTTCTGGATTTCTGCTTATGGGTTCTTGATTCTTTGGTTGTGCTTCATTATGTTGTACTGATTTATACAAGATCATGTTTCGTTGAGTTCAGCTATTGTTATTGCAGCAAATAATTCGGCGCCCCTTTCATGGTCTTCTTTCAAACGTTTCTTCTGATGGGTTGGTTTTGATCATTGTTTTATGCGTTACCTTCTTCTCAAGTAGTTGTGCTTGTTGGGTCAAGAAGTTCTTCAAACTTGCCCCATTCCAAATGAAATTGCTTCGTACGACAATGAATCCTCATCTTACACGAAATTAAGAAGCTCTTCAACTTAACCCCATTTAATTTTAACTGGTAAACTTTAGAGAACGATGTTATATTATAACCAAAATCCAGCTAAAAGCAATTGCCATGTATTAAAATTTCTGAGCATTATCTGGAGATGGTCACTAGTTATCATTCTATTGGCTAGAACACTGACAATTTTACACAAATAGCTGTAGGTCCAAGGATGAGGATTATGTATGAATTTCATCAATTCCAAAGTTAATAAGGCCTATCTAAGAACATAATGGAACAAATACGAGGGGCTAGCTTTAGCTGTCTTTCATCTCTTACAAAATGACCAACTGTATACTTGTCAGGACTAGCAATCTCATTGGGATGTTTTATTTATAACTTTTTTGTTTGTGTTTGGGCTAGCTAAGCTAATGAGATAACTTATTGACCATATAATATTTTTTTGCCATGTAAACTCGATTCTAATGATACTCATTAGAATTTAGTTGAAAGATTGCCTTCCTATTCTCTTCTTCATCGAACAATCTCTTGAGCCCGTATCTGTTTTAGAGATGAGCCTCAAATCCACTCTATCAGCTAAAAGTCTTTCCTCAAGAAAGGGCCTTAGAATGAGCAAGGAACTTGTAACAATTTCATTCTCCGAACTATGTTGGAATTCCTTGAAAGGATGCTAGGGGAAAGTTCTCTTTTCTTTAATCCGAACTAATTTTGGTGGCCCTGCTTCAACAATTGTAGCTGACTCTCGTGGTGCCAAAAAACCTGTAACGACCTAGATCCACTGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACACTCCAAAGAAGGATAATATCTGCTAGCGGTAGGCCTGGGTCGTTACAATACCTCTCTTCTAACTTCATTTTTGTTCTTTCTCCATTTTTTTGTTAAAAAATTTCCAAGAGTAGTAATATCCACTTAAAGCCTCAGAGGTATAAGGGGAAGAAATTTGTGAAGTAATATCCACTTTAGTTGATTGGATACTTCCAAATACTTTTCTGTCGCAGGTGTTGTGTTTCTCCTTTACAGACGTAACTTCATCAGGAATGCCAGCCATGCTATATGACAATGGAGTCTTACCTTCATTCATACATAAGCGATGAGATTTAATTTTTCCAATTATAGATGCTTTAGAAAGTATGATCTTCAAAGGGTTAGTTTGCATTGATTGTTTAGGGAGACACTTAGGTATCAGAATTAAAGTGGGTGTTTCATGTTTGAATGTATGTTTGTATACTGCTAGCTTTACTTATGAATAATTCTTAAGACCGTGTTTCATGTTTGAATGTATGTTTGTATACTGCTAGCTTTACTTATGAATAATTCTTAAGACCGCATTTCTTCAATGCTAAAACTGACAGATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGACGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTAATATTCATTTTCAAGTAGAATCGCTTCCTTTTCTTTTGGTTAAGACCATTCCTAAACTGAAACATACTATATACCATGTTACAGCAAGTATTGATCAACTATATATTTCACGGATATTTAGCATTGTATTTTGGAAACTAAGGAGCTCATTTGTGAACCATTGTGCATACTTATGATTATAAGAAAATATCAACTAAGCGCTGTTTTATTTTGGGGTTCATTTTACCTTCGATGGAATTATGCCTCGATAATCTGCTCGGGTATTTGGGGTCTGGAAACCCCCAGTTGAGAATCTGAGACCTATCAGGAATACAACTCTTTGGACAAAGATGCAAGAGAAAATGTGTATATATGGAACGGCCCAAATCCATAGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCAGGCTTCCCCTCAAGGTTTTTAAAACGCATCTATTATGGAGAGGTTTCCACACCTTTATAAAAAATGCTACGTCCCCCTCTCCCACCGATGTGGGATCACAATCCACCCCACTTTGGGGCCCAACGTTCTCGCTGGCAATTGTTCCCCTCTCCAATCAATGTGGGATCTCACAATCCACCCCTCTACGGGGCCCGGCGTCCTCGCTGGCACTTTGCCTAGTGTCGGGCTTTGATACTATTTGTGACAGCCCAAACCCACCGCTATCAGATATTGTCCTCTTTGAGCTTTCCCCTCAAGGTTTTATAATACATCTGTTAGGGAGATGTTTCCACACCCTTATAAGGAATGTTTCGTTCTCCTCTCATCCGACGTGGAATCTCACAATATAACTGTTGGGAGTTTGACTTATTGTGCTTGGCTGCTTGAAAACTTTTTTTGACCTCTTCATTTTATTGATTATTTCTTTTACGTTTTAGTTTCTGGAAATTTATAGGTTGCAGGAGCAATCGTGATATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGATGAAGTACGCAGACAAGAAATGGAGGTAATGGTATAG

mRNA sequence

TTATATGGGGAAAATAATTTTCGGAATTCCCTCGTCAAATATTGCTCGCGGGAAACCTAAACCATTTGCCAATTTGGCGACTTCGCTCCAACGGTTCCTCGATCGCAAATGGCTTGTCTTCATCTTCTCTGACTATTCAATTCGTTGACATTCATTGGCTCTGACCGTGTGTTGTTAATTCCCGAAGAACAGCAAAAGCGAAGCCTTCGAATCAGATTACCGAATTTATTCGTTGTAGTCATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTAGCCCAGGTGTTGTGTTTCTCCTTTACAGACGTAACTTCATCAGGAATGCCAGCCATGCTATATGACAATGGAATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGACGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTTGCAGGAGCAATCGTGATATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGATGAAGTACGCAGACAAGAAATGGAGGTAATGGTATAG

Coding sequence (CDS)

ATGGTACTCCCGGTACTGAAGCTCGGAACGCTCGTGTTGAAAACTCTGAGCAAGCCACTTGGTAATAGGCTCAAGAAGCAAGCTGCGTTGCACCCCAGATTTAGGCAGTCTATCATCAATTTAGCCCAGGTGTTGTGTTTCTCCTTTACAGACGTAACTTCATCAGGAATGCCAGCCATGCTATATGACAATGGAATTAACCATCGGATGTCAACACAAATGCAAAGACGCATATATGGTCATGCAACTGACGTAGAAATTCGCCCTCTGGATGAGGAGAAAGCAGTTCAGGCTGCTGTTGACCTGATTGGCGAGGTTTTTGTTTTCTCGGTTGCAGGAGCAATCGTGATATTTGAGGTTCAGAGAAGTGCTAGATCAGAAGCCAGAAAAGATGAAGTACGCAGACAAGAAATGGAGGTAATGGTATAG

Homology

[Close]

BLAST of CmoCh07G002140 vs. Swiss-Prot
Match: OPA3_SCHPO (OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1703.11 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-11
Identity = 47/129 (36.43%), Postives = 70/129 (54.26%), Query Frame = 1


Query: 6   LKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQVLCFSFTDVTSSGMPAMLYDNG 65
           LK+G+L+++TLSKP+ N +K QA  H  FR++ I  AQ +  +   +T           G
Sbjct: 6   LKIGSLLVRTLSKPIANTIKAQAKEHKAFRKACIEFAQWMHRAEFRIT-----------G 65

Query: 66  INHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQRSAR 125
           IN   S            +V +RPL++ KAV A    + E F+F+VAG  ++FE  R+ R
Sbjct: 66  INRAKSG---------GANVRLRPLNDAKAVDAGATFLSETFIFTVAGGAILFETWRARR 114

Query: 126 SEA-RKDEV 134
            E  R+DEV
Sbjct: 126 KEKNRRDEV 114

[Close]

BLAST of CmoCh07G002140 vs. Swiss-Prot
Match: OPA32_DROME (Putative OPA3-like protein CG13603 OS=Drosophila melanogaster GN=CG13601 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.3e-07
Identity = 41/136 (30.15%), Postives = 64/136 (47.06%), Query Frame = 1


Query: 2   VLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQVLCFSFTDVTSSGMPAML 61
           V P  KLG L +K +SKP+ N +K  A   P FR+ I                  MP   
Sbjct: 5   VFPAAKLGILAIKQVSKPIANVIKSNAKSSPFFRKYIC-----------------MPPAQ 64

Query: 62  YDNGINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEVQ 121
           + N +   + T+M     G    V + PL+E  A++   +L+GE  +FS+   ++IFE  
Sbjct: 65  FYNWVE--VKTKMWALNMGGR--VNVPPLNEAMAIELGANLLGEFIIFSIGAGLLIFEYS 119

Query: 122 RSARSEARKDEVRRQE 138
           R    E +K+E+ + E
Sbjct: 125 RQTIKENKKNELAQSE 119

[Close]

BLAST of CmoCh07G002140 vs. TrEMBL
Match: A0A0A0KLK3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518220 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 9.6e-46
Identity = 107/141 (75.89%), Postives = 115/141 (81.56%), Query Frame = 1


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQVLCFSFTDVTSSGMPAM 60
           MVLP+LKLGTL LKTLSKPLGNRLKKQAALHPRFRQ IIN+AQ+                
Sbjct: 1   MVLPLLKLGTLALKTLSKPLGNRLKKQAALHPRFRQFIINVAQM---------------- 60

Query: 61  LYDNGINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEV 120
                 NHRMSTQMQRRIY HATDVEIRPLDEEKAVQAAVDLIGEVFVF+VAGA+VIFEV
Sbjct: 61  ------NHRMSTQMQRRIYSHATDVEIRPLDEEKAVQAAVDLIGEVFVFTVAGAVVIFEV 119

Query: 121 QRSARSEARKDEVRRQEMEVM 142
           QRSARSEARK+EVRRQE+E +
Sbjct: 121 QRSARSEARKEEVRRQEIEAL 119

[Close]

BLAST of CmoCh07G002140 vs. TrEMBL
Match: W9SF62_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015037 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.9e-40
Identity = 94/141 (66.67%), Postives = 112/141 (79.43%), Query Frame = 1


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQVLCFSFTDVTSSGMPAM 60
           MVLP+LKLGTL LKTLSKP+ +RLKKQA LHPRFRQ I+++AQ                 
Sbjct: 1   MVLPLLKLGTLALKTLSKPVASRLKKQAGLHPRFRQFIVDIAQK---------------- 60

Query: 61  LYDNGINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEV 120
                 NH+++TQMQRRIYGHATDVEIRPL+EEKAVQAAVDL+GEVFVFSVAG  +IFEV
Sbjct: 61  ------NHQITTQMQRRIYGHATDVEIRPLNEEKAVQAAVDLMGEVFVFSVAGIALIFEV 119

Query: 121 QRSARSEARKDEVRRQEMEVM 142
           QRS+RSEARK+E+RR+E+E+M
Sbjct: 121 QRSSRSEARKEEIRRKELEMM 119

[Close]

BLAST of CmoCh07G002140 vs. TrEMBL
Match: A0A059CE24_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00582 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.9e-40
Identity = 95/141 (67.38%), Postives = 110/141 (78.01%), Query Frame = 1


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQVLCFSFTDVTSSGMPAM 60
           MVLP+LKLGTLV+KT+SKPL +RLK+QAALHPRFR  I+  AQ                 
Sbjct: 1   MVLPLLKLGTLVVKTMSKPLASRLKQQAALHPRFRGLIVGFAQA---------------- 60

Query: 61  LYDNGINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEV 120
                 NHRM+T +QRRIYGHATDVEIRPL+E+KAVQAAVDLIGEVFVFSVAGA+VIFEV
Sbjct: 61  ------NHRMTTNIQRRIYGHATDVEIRPLNEQKAVQAAVDLIGEVFVFSVAGAVVIFEV 119

Query: 121 QRSARSEARKDEVRRQEMEVM 142
           QRSA+SEARK+E RR+E+E M
Sbjct: 121 QRSAKSEARKEEKRREELEAM 119

[Close]

BLAST of CmoCh07G002140 vs. TrEMBL
Match: B9N9L1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s05880g PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-39
Identity = 94/141 (66.67%), Postives = 110/141 (78.01%), Query Frame = 1


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQVLCFSFTDVTSSGMPAM 60
           MVLP+LKLGTL LKTLSKPL +R+K+QAA HP+FRQ I+N+AQ                 
Sbjct: 1   MVLPLLKLGTLALKTLSKPLASRIKQQAAFHPKFRQFIVNIAQA---------------- 60

Query: 61  LYDNGINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEV 120
                 NHR++T+ QRRIYGHATDVEIRPL+EEKAVQAAVDLIGEVFVF+VAGA VIFEV
Sbjct: 61  ------NHRITTRTQRRIYGHATDVEIRPLNEEKAVQAAVDLIGEVFVFTVAGAAVIFEV 119

Query: 121 QRSARSEARKDEVRRQEMEVM 142
           QRSA+SEARK+E R+QE+E M
Sbjct: 121 QRSAKSEARKEEKRKQELEAM 119

[Close]

BLAST of CmoCh07G002140 vs. TrEMBL
Match: A0A0S3S2T5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G047000 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-39
Identity = 92/141 (65.25%), Postives = 112/141 (79.43%), Query Frame = 1


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQVLCFSFTDVTSSGMPAM 60
           MVLP+LKLGTL LKTLSKP+ +RLK+QAA HPRFRQ I+N+AQ                 
Sbjct: 1   MVLPLLKLGTLALKTLSKPVASRLKQQAAFHPRFRQLIVNMAQT---------------- 60

Query: 61  LYDNGINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEV 120
                 NH+++T+MQRRIYGHATDVEIRPL+EEKAVQAAVDLIGE+FVFSVAG ++IFEV
Sbjct: 61  ------NHQITTRMQRRIYGHATDVEIRPLNEEKAVQAAVDLIGELFVFSVAGVLLIFEV 119

Query: 121 QRSARSEARKDEVRRQEMEVM 142
           QRS+RSEARK+E+R+QE+E +
Sbjct: 121 QRSSRSEARKEELRKQELEAV 119

[Close]

BLAST of CmoCh07G002140 vs. TAIR10
Match: AT1G28510.1 (AT1G28510.1 Optic atrophy 3 protein (OPA3))

HSP 1 Score: 167.9 bits (424), Expect = 4.4e-42
Identity = 90/139 (64.75%), Postives = 108/139 (77.70%), Query Frame = 1


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQVLCFSFTDVTSSGMPAM 60
           MVLP++KLGTL +KT+SKPL ++LK QA +HP+FRQSIIN AQ                 
Sbjct: 1   MVLPLMKLGTLAVKTISKPLASQLKHQAKVHPKFRQSIINFAQR---------------- 60

Query: 61  LYDNGINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEV 120
                 NHR++TQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGE+F+F V GA+V+FEV
Sbjct: 61  ------NHRITTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEIFLFGVGGAVVVFEV 117

Query: 121 QRSARSEARKDEVRRQEME 140
           QRS+RSEARK+E R+QE+E
Sbjct: 121 QRSSRSEARKEEARKQELE 117

[Close]

BLAST of CmoCh07G002140 vs. TAIR10
Match: AT3G58150.1 (AT3G58150.1 Optic atrophy 3 protein (OPA3))

HSP 1 Score: 134.8 bits (338), Expect = 4.1e-32
Identity = 72/138 (52.17%), Postives = 98/138 (71.01%), Query Frame = 1


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQVLCFSFTDVTSSGMPAM 60
           MVLP+LKLGTL L+T+ KP+ N+LKK+A ++P+FRQ IIN+AQ                 
Sbjct: 12  MVLPLLKLGTLALRTICKPIANQLKKEAGVNPKFRQFIINIAQA---------------- 71

Query: 61  LYDNGINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEV 120
                 NHR +T++QRR  G  TD  IRPL+EE+AVQAA DL+GE+F F+VAGA +++EV
Sbjct: 72  ------NHRFTTKLQRRASGRITDAVIRPLNEERAVQAAADLLGELFAFTVAGAALVYEV 127

Query: 121 QRSARSEARKDEVRRQEM 139
           QR+AR EA+K+E R+QE+
Sbjct: 132 QRNARGEAKKEEKRQQEL 127

[Close]

BLAST of CmoCh07G002140 vs. NCBI nr
Match: gi|449433790|ref|XP_004134680.1| (PREDICTED: OPA3-like protein [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 1.4e-45
Identity = 107/141 (75.89%), Postives = 115/141 (81.56%), Query Frame = 1


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQVLCFSFTDVTSSGMPAM 60
           MVLP+LKLGTL LKTLSKPLGNRLKKQAALHPRFRQ IIN+AQ+                
Sbjct: 1   MVLPLLKLGTLALKTLSKPLGNRLKKQAALHPRFRQFIINVAQM---------------- 60

Query: 61  LYDNGINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEV 120
                 NHRMSTQMQRRIY HATDVEIRPLDEEKAVQAAVDLIGEVFVF+VAGA+VIFEV
Sbjct: 61  ------NHRMSTQMQRRIYSHATDVEIRPLDEEKAVQAAVDLIGEVFVFTVAGAVVIFEV 119

Query: 121 QRSARSEARKDEVRRQEMEVM 142
           QRSARSEARK+EVRRQE+E +
Sbjct: 121 QRSARSEARKEEVRRQEIEAL 119

[Close]

BLAST of CmoCh07G002140 vs. NCBI nr
Match: gi|659078577|ref|XP_008439797.1| (PREDICTED: OPA3-like protein [Cucumis melo])

HSP 1 Score: 191.0 bits (484), Expect = 1.4e-45
Identity = 107/141 (75.89%), Postives = 115/141 (81.56%), Query Frame = 1


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQVLCFSFTDVTSSGMPAM 60
           MVLP+LKLGTL LKTLSKPLGNRLKKQAALHPRFRQ IIN+AQ+                
Sbjct: 1   MVLPLLKLGTLALKTLSKPLGNRLKKQAALHPRFRQFIINVAQM---------------- 60

Query: 61  LYDNGINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEV 120
                 NHRMSTQMQRRIY HATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGA+VIFEV
Sbjct: 61  ------NHRMSTQMQRRIYSHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAVVIFEV 119

Query: 121 QRSARSEARKDEVRRQEMEVM 142
           QRSARSEARK+EVR+QE+E +
Sbjct: 121 QRSARSEARKEEVRKQEIEAL 119

[Close]

BLAST of CmoCh07G002140 vs. NCBI nr
Match: gi|951041510|ref|XP_014517951.1| (PREDICTED: OPA3-like protein [Vigna radiata var. radiata])

HSP 1 Score: 171.8 bits (434), Expect = 8.7e-40
Identity = 93/141 (65.96%), Postives = 113/141 (80.14%), Query Frame = 1


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQVLCFSFTDVTSSGMPAM 60
           MVLP+LKLGTL LKTLSKP+ +RLK+QAALHPRFRQ I+N+AQ                 
Sbjct: 1   MVLPLLKLGTLALKTLSKPVASRLKQQAALHPRFRQLIVNMAQT---------------- 60

Query: 61  LYDNGINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEV 120
                 NH+++T+MQRRIYGHATDVEIRPL+EEKAVQAAVDLIGE+FVFSVAG ++IFEV
Sbjct: 61  ------NHQITTRMQRRIYGHATDVEIRPLNEEKAVQAAVDLIGELFVFSVAGVLLIFEV 119

Query: 121 QRSARSEARKDEVRRQEMEVM 142
           QRS+RSEARK+E+R+QE+E +
Sbjct: 121 QRSSRSEARKEELRKQELEAV 119

[Close]

BLAST of CmoCh07G002140 vs. NCBI nr
Match: gi|702318413|ref|XP_010052253.1| (PREDICTED: OPA3-like protein [Eucalyptus grandis])

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39
Identity = 95/141 (67.38%), Postives = 110/141 (78.01%), Query Frame = 1


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQVLCFSFTDVTSSGMPAM 60
           MVLP+LKLGTLV+KT+SKPL +RLK+QAALHPRFR  I+  AQ                 
Sbjct: 1   MVLPLLKLGTLVVKTMSKPLASRLKQQAALHPRFRGLIVGFAQA---------------- 60

Query: 61  LYDNGINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEV 120
                 NHRM+T +QRRIYGHATDVEIRPL+E+KAVQAAVDLIGEVFVFSVAGA+VIFEV
Sbjct: 61  ------NHRMTTNIQRRIYGHATDVEIRPLNEQKAVQAAVDLIGEVFVFSVAGAVVIFEV 119

Query: 121 QRSARSEARKDEVRRQEMEVM 142
           QRSA+SEARK+E RR+E+E M
Sbjct: 121 QRSAKSEARKEEKRREELEAM 119

[Close]

BLAST of CmoCh07G002140 vs. NCBI nr
Match: gi|703155260|ref|XP_010111155.1| (hypothetical protein L484_015037 [Morus notabilis])

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39
Identity = 94/141 (66.67%), Postives = 112/141 (79.43%), Query Frame = 1


Query: 1   MVLPVLKLGTLVLKTLSKPLGNRLKKQAALHPRFRQSIINLAQVLCFSFTDVTSSGMPAM 60
           MVLP+LKLGTL LKTLSKP+ +RLKKQA LHPRFRQ I+++AQ                 
Sbjct: 1   MVLPLLKLGTLALKTLSKPVASRLKKQAGLHPRFRQFIVDIAQK---------------- 60

Query: 61  LYDNGINHRMSTQMQRRIYGHATDVEIRPLDEEKAVQAAVDLIGEVFVFSVAGAIVIFEV 120
                 NH+++TQMQRRIYGHATDVEIRPL+EEKAVQAAVDL+GEVFVFSVAG  +IFEV
Sbjct: 61  ------NHQITTQMQRRIYGHATDVEIRPLNEEKAVQAAVDLMGEVFVFSVAGIALIFEV 119

Query: 121 QRSARSEARKDEVRRQEMEVM 142
           QRS+RSEARK+E+RR+E+E+M
Sbjct: 121 QRSSRSEARKEEIRRKELEMM 119

The following BLAST results are available for this feature:

BLAST of CmoCh07G002140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
OPA3_SCHPO	1.0e-11	36.43	OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC...	[more]
OPA32_DROME	4.3e-07	30.15	Putative OPA3-like protein CG13603 OS=Drosophila melanogaster GN=CG13601 PE=2 SV...	[more]

BLAST of CmoCh07G002140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLK3_CUCSA	9.6e-46	75.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518220 PE=4 SV=1	[more]
W9SF62_9ROSA	7.9e-40	66.67	Uncharacterized protein OS=Morus notabilis GN=L484_015037 PE=4 SV=1	[more]
A0A059CE24_EUCGR	7.9e-40	67.38	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D00582 PE=4 SV=1	[more]
B9N9L1_POPTR	1.3e-39	66.67	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s05880g PE=4 SV=1	[more]
A0A0S3S2T5_PHAAN	1.8e-39	65.25	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G047000 PE=...	[more]

BLAST of CmoCh07G002140 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G28510.1	4.4e-42	64.75	Optic atrophy 3 protein (OPA3)	[more]
AT3G58150.1	4.1e-32	52.17	Optic atrophy 3 protein (OPA3)	[more]

BLAST of CmoCh07G002140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449433790\|ref\|XP_004134680.1\|	1.4e-45	75.89	PREDICTED: OPA3-like protein [Cucumis sativus]	[more]
gi\|659078577\|ref\|XP_008439797.1\|	1.4e-45	75.89	PREDICTED: OPA3-like protein [Cucumis melo]	[more]
gi\|951041510\|ref\|XP_014517951.1\|	8.7e-40	65.96	PREDICTED: OPA3-like protein [Vigna radiata var. radiata]	[more]
gi\|702318413\|ref\|XP_010052253.1\|	1.1e-39	67.38	PREDICTED: OPA3-like protein [Eucalyptus grandis]	[more]
gi\|703155260\|ref\|XP_010111155.1\|	1.1e-39	66.67	hypothetical protein L484_015037 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010754	OPA3-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0019216	regulation of lipid metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G002140.1	CmoCh07G002140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010754	Optic atrophy 3-like	PANTHER	PTHR12499	OPTIC ATROPHY 3 PROTEIN OPA3	coord: 67..141 score: 8.2E-74coord: 1..44 score: 8.2
IPR010754	Optic atrophy 3-like	PFAM	PF07047	OPA3	coord: 3..45 score: 2.4E-12coord: 67..140 score: 1.2
None	No IPR available	PANTHER	PTHR12499:SF2	SUBFAMILY NOT NAMED	coord: 67..141 score: 8.2E-74coord: 1..44 score: 8.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G002140	CmaCh03G012990	Cucurbita maxima (Rimu)	cmacmoB672
CmoCh07G002140	Cla009654	Watermelon (97103) v1	cmowmB816
CmoCh07G002140	MELO3C007250	Melon (DHL92) v3.5.1	cmomeB782
CmoCh07G002140	ClCG01G023360	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G002140	Lsi01G002780	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G002140	Cp4.1LG10g05120	Cucurbita pepo (Zucchini)	cmocpeB801
CmoCh07G002140	MELO3C007250.2	Melon (DHL92) v3.6.1	cmomedB886
CmoCh07G002140	Cla97C01G023220	Watermelon (97103) v2	cmowmbB849
CmoCh07G002140	Bhi03G000275	Wax gourd	cmowgoB1051
CmoCh07G002140	CsGy6G034520	Cucumber (Gy14) v2	cgybcmoB843

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh07G002140	CmoCh03G012960	Cucurbita moschata (Rifu)	cmocmoB459

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G002140	Wild cucumber (PI 183967)	cmocpiB873
CmoCh07G002140	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G002140	Melon (DHL92) v3.5.1	cmomeB771
CmoCh07G002140	Watermelon (Charleston Gray)	cmowcgB760
CmoCh07G002140	Watermelon (97103) v1	cmowmB809
CmoCh07G002140	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G002140	Cucurbita pepo (Zucchini)	cmocpeB818
CmoCh07G002140	Bottle gourd (USVL1VR-Ls)	cmolsiB783
CmoCh07G002140	Melon (DHL92) v3.6.1	cmomedB875
CmoCh07G002140	Silver-seed gourd	carcmoB0745
CmoCh07G002140	Silver-seed gourd	carcmoB0888
CmoCh07G002140	Silver-seed gourd	carcmoB1270
CmoCh07G002140	Cucumber (Chinese Long) v3	cmocucB1019
CmoCh07G002140	Watermelon (97103) v2	cmowmbB857
CmoCh07G002140	Wax gourd	cmowgoB1074
CmoCh07G002140	Cucurbita moschata (Rifu)	cmocmoB190
CmoCh07G002140	Cucumber (Gy14) v1	cgycmoB0043
CmoCh07G002140	Cucurbita maxima (Rimu)	cmacmoB240
CmoCh07G002140	Cucurbita maxima (Rimu)	cmacmoB875