CmoCh07G002090 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G002090
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionWUSCHEL-related homeobox 9
LocationCmo_Chr07 : 1051693 .. 1053627 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGGTGTTCAGAGTTGAGTATCATAGGCAACCAAAAGCCTTTCTTTTTGTTTGTTTGTTTGTTTGTTTGATTCTGGTGTTTGTGTTATTATTCCTTTATCCTCATGGCTTCCTCAAACAGACACTGGCCTAGCATGTTCAAGTCCAAGCCCTGCAATTCTCACCACCAATGGCAGCATGACATCAACCCAAATCTCTCTTCTTCCACTGCCACTTGCCTCAGATCTGCTCCTTATGCTACAGGTTCTTCTTCTTGTTGGTCCATTTTGTGTTGTATTTGTTCATATGTTTTAGAATTTGATTGATTTGTGTGTGTGTTTTTTTGTCTACAGTTGGTGGGTGTGAAGAGAGGAGTCCAGAGCCAAAACCAAGATGGAATCCAAAACCAGAACAAATTCGGATTCTTGAAGCAATTTTCAATTCCGGGATGGTGAATCCTCCAAGAGATGAAATTAGAAAAATTAGAGCTCAATTGCAGGAGTATGGACAAGTGGGTGATGCTAATGTTTTTTATTGGTTTCAAAACAGAAAATCAAGAAGCAAAAGCAAACTCCGCCATATCCAAAACTCCAAATCTAATAATAATCACAATTCCCAAACCACCACTGCTCCTTTACCATCTCCTATTCCTCCCATCGCCACTGCCACCATCACCACCGCCGCCGCCGCCGCCACAACTTGTTCTTCCTCTTCTTCTTCCGACAAATCTTCTCCAATATCAGCACCCATCAAAACTTTTAGCTCCAATTCAATGACCCAGAACTACCTTCCACAACTCACCAACGAGCTCATGCCTGAACCCTTTTTCTTCCCGGTGTCACAGACCGGCGGCGGTGGCAGCGGTGGAAGCTCTAATTTGAGTCAAGGGTTTTGCTTGTCGGAGCTTTGTAGTGTAGTGCAGCAAGTGCCTGAAGATGGGGTTGTTGGGCCTTGCACAAGCCTGTTGCTGAGTGAGATTATGAACCCAACTGAGGCTTCAAAAAAAGATTTGGATGAGGACAAGATCACGGTGAAGTTGCCGCCTCCATTCATGAATTATCATCCTGTTTTCACTCCCTCCACTGATAACATTCTTCCACCAACCACTATTTCCACCGCCCTCACCACTCTCCCACCTCCTTCCCATACAATTCATCAAGGTAAAGTTATTAAAGTAACCAGTTTTAAGTCAATTATGGTTGCATGACTTTTGGGTAACTCTCCTTTTTGGTTTATCTCTTAGAAGGAAGGATTTTGTGAAATGGGTTGAAACGTAAAGCAAAAAGGGGTTTAAAAAAGTAAATAAAAATGAAAACTTGATTGAAATTTATGATATATGAACAAATAGGGTTATGATGAGTGTGGTGTTGGATGGACGTGTGCATGGGTTTGAGGCACCCTTGACCTACACTAAAAAAATATTTCTTTTTTAAAAAAAGAAGAGAAGGAGTGATCGTGTGTTTGCAGGTGTAGGTGAAGTTTATGGATTAGGTCAAAGCTGTGTAGGGAAGTCAACAGTGTTCATCAATGGTGTGGCGTTCGAGGTGGGTTCTGGTGCGTTCAATGTCCGGGAGGCTTTTGGTGATGAAGCTGTTCTGCTTCACTCCTCTGGTCAGCCTGTTCTCACTAATGAATGGGGCCTCACTCTCCACTCACTCCAACATGGCGCCTCTTATTATCTTGTTAGTTCCATCATATGCCTCTCTTGCCTTTCTTCTATACCTTTCTTGTTTTGATATTGTGTTCGTATTTGCAGATATAAAGAAGATTTGAAAGTGGAGGAGGAACCAGCAGGGAATGGAAGAACGTAGCTGTGGTGTATGATTAGCTTAGGGTTTGAATTTGAGTGTTTGTGAGAGCTGTTATCATATCTATATGAGGCAATGTAATTTGAATATTTGGTTTGAATGGACCTGTTATTAGATCTATGTGTTGTTTCATGAGAAATGAAGAGACC

mRNA sequence

AGGGTGTTCAGAGTTGAGTATCATAGGCAACCAAAAGCCTTTCTTTTTGTTTGTTTGTTTGTTTGTTTGATTCTGGTGTTTGTGTTATTATTCCTTTATCCTCATGGCTTCCTCAAACAGACACTGGCCTAGCATGTTCAAGTCCAAGCCCTGCAATTCTCACCACCAATGGCAGCATGACATCAACCCAAATCTCTCTTCTTCCACTGCCACTTGCCTCAGATCTGCTCCTTATGCTACAGTTGGTGGGTGTGAAGAGAGGAGTCCAGAGCCAAAACCAAGATGGAATCCAAAACCAGAACAAATTCGGATTCTTGAAGCAATTTTCAATTCCGGGATGGTGAATCCTCCAAGAGATGAAATTAGAAAAATTAGAGCTCAATTGCAGGAGTATGGACAAGTGGGTGATGCTAATGTTTTTTATTGGTTTCAAAACAGAAAATCAAGAAGCAAAAGCAAACTCCGCCATATCCAAAACTCCAAATCTAATAATAATCACAATTCCCAAACCACCACTGCTCCTTTACCATCTCCTATTCCTCCCATCGCCACTGCCACCATCACCACCGCCGCCGCCGCCGCCACAACTTGTTCTTCCTCTTCTTCTTCCGACAAATCTTCTCCAATATCAGCACCCATCAAAACTTTTAGCTCCAATTCAATGACCCAGAACTACCTTCCACAACTCACCAACGAGCTCATGCCTGAACCCTTTTTCTTCCCGGTGTCACAGACCGGCGGCGGTGGCAGCGGTGGAAGCTCTAATTTGAGTCAAGGGTTTTGCTTGTCGGAGCTTTGTAGTGTAGTGCAGCAAGTGCCTGAAGATGGGGTTGTTGGGCCTTGCACAAGCCTGTTGCTGAGTGAGATTATGAACCCAACTGAGGCTTCAAAAAAAGATTTGGATGAGGACAAGATCACGGTGAAGTTGCCGCCTCCATTCATGAATTATCATCCTGTTTTCACTCCCTCCACTGATAACATTCTTCCACCAACCACTATTTCCACCGCCCTCACCACTCTCCCACCTCCTTCCCATACAATTCATCAAGGTGTAGGTGAAGTTTATGGATTAGGTCAAAGCTGTGTAGGGAAGTCAACAGTGTTCATCAATGGTGTGGCGTTCGAGGTGGGTTCTGGTGCGTTCAATGTCCGGGAGGCTTTTGGTGATGAAGCTGTTCTGCTTCACTCCTCTGGTCAGCCTGTTCTCACTAATGAATGGGGCCTCACTCTCCACTCACTCCAACATGGCGCCTCTTATTATCTTATATAAAGAAGATTTGAAAGTGGAGGAGGAACCAGCAGGGAATGGAAGAACGTAGCTGTGGTGTATGATTAGCTTAGGGTTTGAATTTGAGTGTTTGTGAGAGCTGTTATCATATCTATATGAGGCAATGTAATTTGAATATTTGGTTTGAATGGACCTGTTATTAGATCTATGTGTTGTTTCATGAGAAATGAAGAGACC

Coding sequence (CDS)

ATGGCTTCCTCAAACAGACACTGGCCTAGCATGTTCAAGTCCAAGCCCTGCAATTCTCACCACCAATGGCAGCATGACATCAACCCAAATCTCTCTTCTTCCACTGCCACTTGCCTCAGATCTGCTCCTTATGCTACAGTTGGTGGGTGTGAAGAGAGGAGTCCAGAGCCAAAACCAAGATGGAATCCAAAACCAGAACAAATTCGGATTCTTGAAGCAATTTTCAATTCCGGGATGGTGAATCCTCCAAGAGATGAAATTAGAAAAATTAGAGCTCAATTGCAGGAGTATGGACAAGTGGGTGATGCTAATGTTTTTTATTGGTTTCAAAACAGAAAATCAAGAAGCAAAAGCAAACTCCGCCATATCCAAAACTCCAAATCTAATAATAATCACAATTCCCAAACCACCACTGCTCCTTTACCATCTCCTATTCCTCCCATCGCCACTGCCACCATCACCACCGCCGCCGCCGCCGCCACAACTTGTTCTTCCTCTTCTTCTTCCGACAAATCTTCTCCAATATCAGCACCCATCAAAACTTTTAGCTCCAATTCAATGACCCAGAACTACCTTCCACAACTCACCAACGAGCTCATGCCTGAACCCTTTTTCTTCCCGGTGTCACAGACCGGCGGCGGTGGCAGCGGTGGAAGCTCTAATTTGAGTCAAGGGTTTTGCTTGTCGGAGCTTTGTAGTGTAGTGCAGCAAGTGCCTGAAGATGGGGTTGTTGGGCCTTGCACAAGCCTGTTGCTGAGTGAGATTATGAACCCAACTGAGGCTTCAAAAAAAGATTTGGATGAGGACAAGATCACGGTGAAGTTGCCGCCTCCATTCATGAATTATCATCCTGTTTTCACTCCCTCCACTGATAACATTCTTCCACCAACCACTATTTCCACCGCCCTCACCACTCTCCCACCTCCTTCCCATACAATTCATCAAGGTGTAGGTGAAGTTTATGGATTAGGTCAAAGCTGTGTAGGGAAGTCAACAGTGTTCATCAATGGTGTGGCGTTCGAGGTGGGTTCTGGTGCGTTCAATGTCCGGGAGGCTTTTGGTGATGAAGCTGTTCTGCTTCACTCCTCTGGTCAGCCTGTTCTCACTAATGAATGGGGCCTCACTCTCCACTCACTCCAACATGGCGCCTCTTATTATCTTATATAA
Homology
[Close]
BLAST of CmoCh07G002090 vs. Swiss-Prot
Match: WOX9_ARATH (WUSCHEL-related homeobox 9 OS=Arabidopsis thaliana GN=WOX9 PE=2 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.2e-75
Identity = 196/412 (47.57%), Postives = 253/412 (61.41%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINPNLSSSTATCLRSAPYATVGGCE-ERSPEPKP 60
           MASSNRHWPSMFKSKP    HQWQHDIN  L  S +   RS+P+++  GCE ERSPEPKP
Sbjct: 1   MASSNRHWPSMFKSKP--HPHQWQHDINSPLLPSASH--RSSPFSS--GCEVERSPEPKP 60

Query: 61  RWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKSK 120
           RWNPKPEQIRILEAIFNSGMVNPPR+EIR+IRAQLQEYGQVGDANVFYWFQNRKSRSK K
Sbjct: 61  RWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 120

Query: 121 LRHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSSPISAPI 180
           LR +     N++ +S   T P P P P          +A++++ SSSSSS  + P  +  
Sbjct: 121 LRLLH----NHSKHSLPQTQPQPQPQP----------SASSSSSSSSSSSKSTKPRKSKN 180

Query: 181 KTFSSNSMTQNYLPQLTNELMPEP-FFFPVSQTGGGGSGGSSNLSQGFCLSELCSVVQQV 240
           K  ++ S+  +   Q+     PEP F FPVS T GG  G + +   GF   ++  + QQ 
Sbjct: 181 KNNTNLSLGGS---QMMGMFPPEPAFLFPVS-TVGGFEGITVSSQLGFLSGDM--IEQQK 240

Query: 241 PEDGVVGPCTSLLLSEIMNPT---------EASKKDLDEDKITVKLPPPFM-----NYHP 300
           P       CT LLLSEIMN +           S+K+++E ++ +   P          H 
Sbjct: 241 P----APTCTGLLLSEIMNGSVSYGTHHQQHLSEKEVEEMRMKMLQQPQTQICYATTNHQ 300

Query: 301 VFTPSTDN--------ILPPTTISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFIN 360
           + + + +N        I P T+ +T +TT    SH++         L      +  VFIN
Sbjct: 301 IASYNNNNNNNNIMLHIPPTTSTATTITT----SHSLATVPSTSDQLQVQADARIRVFIN 360

Query: 361 GVAFEVGSGAFNVREAFGDEAVLLHSSGQPVLTNEWGLTLHSLQHGASYYLI 389
            +  EV SG FNVR+AFG+E VL++S+GQP++T+E+G+ LH LQHGASYYLI
Sbjct: 361 EMELEVSSGPFNVRDAFGEEVVLINSAGQPIVTDEYGVALHPLQHGASYYLI 378

[Close]
BLAST of CmoCh07G002090 vs. Swiss-Prot
Match: WOX8_ARATH (WUSCHEL-related homeobox 8 OS=Arabidopsis thaliana GN=WOX8 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.8e-46
Identity = 145/392 (36.99%), Postives = 193/392 (49.23%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINPNLSSSTATCLRSAPYATVGGCEERSPEPKPR 60
           M+SSN++WPSMFKSKPCN++H  QH+I+       + C  S+ +++     +R P+PKPR
Sbjct: 1   MSSSNKNWPSMFKSKPCNNNHHHQHEIDTPSYMHYSNCNLSSSFSS-----DRIPDPKPR 60

Query: 61  WNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKSKL 120
           WNPKPEQIRILE+IFNSG +NPPR+EI++IR +LQEYGQ+GDANVFYW            
Sbjct: 61  WNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYW------------ 120

Query: 121 RHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSS-PISAPI 180
              QN KS   H  +       SP                      S  DK+  P +   
Sbjct: 121 --FQNRKSRAKHKLRVHHK---SP--------------------KMSKKDKTVIPSTDAD 180

Query: 181 KTFSSNSMTQNYLPQLTNELM---PEPFFFPVSQTGGGGSGGSSNLSQGFCLSELCSVVQ 240
             F   +      P   NEL+   P  F FPV           S     F   +   VV 
Sbjct: 181 HCFGFVNQETGLYPVQNNELVVTEPAGFLFPVHND-------PSAAQSAFGFGDF--VVP 240

Query: 241 QVPEDGVVGPCTSLLLSEIMNPTEASKKDLDEDKITVKLPPPFMNYHPVFTPSTDNILPP 300
            V E+G+         S + N       + + DKI      P +N +        N  PP
Sbjct: 241 VVTEEGMA-------FSTVNNGVNLETNE-NFDKI------PAINLYGGDGNGGGNCFPP 300

Query: 301 TTISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFINGVAFEVGSGAFNVREAFGDE 360
            T+   +            G GE  G     V + TVFIN +  EV SG FNV+ AFG++
Sbjct: 301 LTVPLTINQSQEKRDVGLSG-GEDVGDNVYPV-RMTVFINEMPIEVVSGLFNVKAAFGND 325

Query: 361 AVLLHSSGQPVLTNEWGLTLHSLQHGASYYLI 389
           AVL++S GQP+LT+E+G+T   LQ+GA YYLI
Sbjct: 361 AVLINSFGQPILTDEFGVTYQPLQNGAIYYLI 325

[Close]
BLAST of CmoCh07G002090 vs. Swiss-Prot
Match: WOX12_ORYSJ (WUSCHEL-related homeobox 12 OS=Oryza sativa subsp. japonica GN=WOX12 PE=2 SV=2)

HSP 1 Score: 179.1 bits (453), Expect = 9.3e-44
Identity = 115/211 (54.50%), Postives = 137/211 (64.93%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSK-PCNSHHQWQHDINPNLSSSTATCLRSAPYATVG---------GC 60
           MAS NRHWPSMF+S   CN   Q Q D+N N SSS++  L     AT G         GC
Sbjct: 1   MASPNRHWPSMFRSNLACNIQQQQQPDMNGNGSSSSSFLLSPPTAATTGNGKPSLLSSGC 60

Query: 61  EE--RSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYW 120
           EE  R+PEPKPRWNP+PEQIRILE IFNSGMVNPPRDEIR+IR QLQEYGQVGDANVFYW
Sbjct: 61  EEGTRNPEPKPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGQVGDANVFYW 120

Query: 121 FQNRKSRSKSKLRHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAA--------- 180
           FQNRKSR+K+KLR    +  +++H+ +    P  S  PP     + +AAAA         
Sbjct: 121 FQNRKSRTKNKLR----AAGHHHHHGRAAALPRAS-APPSTNIVLPSAAAAAPLTPPRRH 180

Query: 181 --ATTCSSSSSSDKSSPISAPIKTFSSNSMT 189
             A T SSSSSSD+SS  S  +K  ++  +T
Sbjct: 181 LLAATSSSSSSSDRSSGSSKSVKPAAAALLT 206

[Close]
BLAST of CmoCh07G002090 vs. Swiss-Prot
Match: WOX7_ORYSJ (WUSCHEL-related homeobox 7 OS=Oryza sativa subsp. japonica GN=WOX7 PE=2 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 4.3e-41
Identity = 112/216 (51.85%), Postives = 136/216 (62.96%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHHQWQHDIN---PNLSSSTAT--------CLRSAPYATVGG 60
           MASSNRHWPSMF+SK      Q Q D+    P+L S ++          L+S+P+++VG 
Sbjct: 1   MASSNRHWPSMFRSKHATQPWQTQPDMAGSPPSLLSGSSAGSAGGGGYSLKSSPFSSVG- 60

Query: 61  CEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWF 120
            EER P+PKPRWNP+PEQIRILEAIFNSGMVNPPRDEI +IR QLQEYGQVGDANVFYWF
Sbjct: 61  -EERVPDPKPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDANVFYWF 120

Query: 121 QNRKSRSKSKLRHIQNSKSNNNHNSQTTTAPLPS----------PIPPIATATITT---- 180
           QNRKSRSK+KLR     ++         +AP  +          P PPI  A        
Sbjct: 121 QNRKSRSKNKLRSGGTGRAGLGLGGNRASAPAAAHREAVAPSFTPPPPILPAPQPVQPQQ 180

Query: 181 ---AAAAATTCSSSSSSDKSSPISAPIKTFSSNSMT 189
              +  AA T SSSSSSD+SS  S P +  S+ +M+
Sbjct: 181 QLVSPVAAPTSSSSSSSDRSSGSSKPARATSTQAMS 214

[Close]
BLAST of CmoCh07G002090 vs. Swiss-Prot
Match: WOX13_ORYSJ (WUSCHEL-related homeobox 13 OS=Oryza sativa subsp. japonica GN=WOX13 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.6e-30
Identity = 87/168 (51.79%), Postives = 106/168 (63.10%), Query Frame = 1 

Query: 39  LRSAPYATVGGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYG 98
           L+S+P+++VG  EER P+PKPR NP+PEQIRILEAIFNSGMVNPPRDEI +IR QLQEYG
Sbjct: 117 LKSSPFSSVG--EERVPDPKPRRNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYG 176

Query: 99  QVGDANVFYWFQNRKSRSKSKLRHIQNSKSN---------------NNHNSQTTTAPLPS 158
           QVGDANVFYWFQNRKSRSK+KLR     ++                  H      +  P 
Sbjct: 177 QVGDANVFYWFQNRKSRSKNKLRSGGTGRAGLGLGGNRASEPPAAATAHREAVAPSFTPP 236

Query: 159 PI---PPIATATITTAAAAATTCSSSSSSDKSSPISAPIKTFSSNSMT 189
           PI    P+       +  AA T  SSSSSD+SS  S P +   + +M+
Sbjct: 237 PILPPQPVQPQQQLVSPVAAPTSLSSSSSDRSSGSSKPARATLTQAMS 282

[Close]
BLAST of CmoCh07G002090 vs. TrEMBL
Match: A0A0A0KLK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518270 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 7.7e-154
Identity = 304/394 (77.16%), Postives = 323/394 (81.98%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINP-NLSSSTAT-CLRSAPYATVGGCEERSPEPK 60
           MASSNRHWPSMFKSKPCNSHHQWQHDIN  +LSSST T CLRSAPY TVGGCEERSPEPK
Sbjct: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINTTSLSSSTPTSCLRSAPYTTVGGCEERSPEPK 60

Query: 61  PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKS 120
           PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK+
Sbjct: 61  PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKN 120

Query: 121 KLRHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSSPISAP 180
           KLRHIQNSKSN  HNSQTTT           T+   TAA    TCSSSSSSDKSSP   P
Sbjct: 121 KLRHIQNSKSN--HNSQTTTT----------TSITATAATTTATCSSSSSSDKSSPKKPP 180

Query: 181 IKTFSSN-SMTQNYLPQLTNELMPEPFFFPVSQTGGGGSGGSSNLSQGFCLSELCSVVQQ 240
           IKT +SN S+TQNYL Q TNE++P+PFFFPVS T  G  GGS NLSQGFC SELCSVVQ 
Sbjct: 181 IKTLTSNNSVTQNYLHQPTNEILPDPFFFPVSSTQTGSGGGSCNLSQGFCFSELCSVVQP 240

Query: 241 VPEDGVVGPCTSLLLSEIMNPTEASKKDLDEDKIT-VKLPPPFMNYHPVFTPS--TDNIL 300
           V E GV GPCTSLLLSEIM+PTEA KKDLD+DKI  VK  P FMN+HP    S  TD+ L
Sbjct: 241 VAEHGV-GPCTSLLLSEIMSPTEALKKDLDQDKINMVKSQPQFMNFHPSNLTSSITDHTL 300

Query: 301 PPTTISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFINGVAFEVGSGAFNVREAFG 360
             +TIST LTTLP P++TI QGVGEV G     VGKSTVFINGV FEV SG FNVREAFG
Sbjct: 301 SQSTISTPLTTLPSPTNTIPQGVGEVCG-----VGKSTVFINGVGFEVSSGPFNVREAFG 360

Query: 361 DEAVLLHSSGQPVLTNEWGLTLHSLQHGASYYLI 389
           DEAVL+HS+GQPVLTN+WGLTLHSLQHG+ YYLI
Sbjct: 361 DEAVLIHSNGQPVLTNDWGLTLHSLQHGSYYYLI 376

[Close]
BLAST of CmoCh07G002090 vs. TrEMBL
Match: A0A0D2TL52_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G165700 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 3.7e-108
Identity = 240/402 (59.70%), Postives = 279/402 (69.40%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINPNLSSSTATCLRSAPYATVGGCEERSPEPKPR 60
           M+SSNRHWPSMFKSKPCN+HHQWQHDINP+L SS       APY +  GCEERSPEPKPR
Sbjct: 1   MSSSNRHWPSMFKSKPCNTHHQWQHDINPSLMSSAC---HKAPYTS--GCEERSPEPKPR 60

Query: 61  WNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKSKL 120
           WNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK KL
Sbjct: 61  WNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKL 120

Query: 121 RHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSSPISAPIK 180
           R++QNSK     N QT         PPI   T  +A +     SSSSSS+KSSP  A   
Sbjct: 121 RNLQNSKQQLQQNQQT---------PPITNMTTISAPS-----SSSSSSEKSSPKGANKS 180

Query: 181 TFS-------------SNSMTQNYLPQLTNELMPEPFFFPVSQTGGGGSGGSSNLSQGFC 240
           TFS             + S+ Q Y  Q  NE + EPFFFP+ Q  GG     S  +Q F 
Sbjct: 181 TFSLSSTNVVDVSSSPTASVNQTYFHQPQNEFLNEPFFFPMQQPAGG-----SGFTQAFG 240

Query: 241 LSELCSVVQQVPEDGVVGPCTSLLLSEIMNPTEASKKDLDEDKITVKLPPPFMNYHPVFT 300
            SEL +V+ QVPE   VGPCTSLLLSEI+    AS+K   E+K+ ++L    ++Y  + T
Sbjct: 241 FSELTNVI-QVPEQ-TVGPCTSLLLSEILT-HGASRK--GEEKMDMQLQ---LSYSTMTT 300

Query: 301 -PSTDNILPPTTISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFINGVAFEVGSGA 360
            PST+ I P T  ++A  T+P  +H IH GVGE   +G   +G+STVFIN VAFEV  G 
Sbjct: 301 APSTNPIAPHTDSTSATVTVPSNTHHIH-GVGEPAAVGHGDLGRSTVFINDVAFEVTVGP 360

Query: 361 FNVREAFGDEAVLLHSSGQPVLTNEWGLTLHSLQHGASYYLI 389
           FNVREAFGD+A+L++S+GQPVLTNEWGLTL SLQHG  YYL+
Sbjct: 361 FNVREAFGDDAILINSAGQPVLTNEWGLTLQSLQHGGFYYLV 369

[Close]
BLAST of CmoCh07G002090 vs. TrEMBL
Match: A0A067JE43_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21504 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.1e-107
Identity = 233/395 (58.99%), Postives = 274/395 (69.37%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHH-QWQHDINPNLSSSTATCLRSAPYATVGGCEERSPEPKP 60
           MASSNRHWPSMFKSKPC SHH QWQH+IN   SS  ++    +PY +V GCEERSPEPKP
Sbjct: 1   MASSNRHWPSMFKSKPCTSHHHQWQHEINS--SSLVSSGCHKSPYTSVPGCEERSPEPKP 60

Query: 61  RWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKSK 120
           RWNPKPEQIRILEAIFNSGMVNPPRDEIR+IRAQLQEYGQVGDANVFYWFQNRKSRSK K
Sbjct: 61  RWNPKPEQIRILEAIFNSGMVNPPRDEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 120

Query: 121 LRHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSSPISAPI 180
           LRH+QNSK     N        PS     +  TI T++++++  SS   S ++  +++P 
Sbjct: 121 LRHLQNSKQQTYQN--------PSVSSSTSALTIPTSSSSSSEKSSPKGSRRTLSLTSPN 180

Query: 181 KTFSSNSMT----QNYLPQLTNELMPEPFFFPVSQTGGGGSGGSSNLSQGFCLSELCSVV 240
               SNS T    Q Y  Q  NE M EPFFFP  QTGG G+G   + +QGFC S+L +V 
Sbjct: 181 VVDVSNSPTGSVNQTYF-QAHNEFMTEPFFFPAQQTGGTGTG---SFTQGFCFSDLSNVA 240

Query: 241 QQVPEDGVVGPCTSLLLSEIMNPTEASKKDLDEDKITVKLPPPFMNYHPVFTPSTDNI-- 300
           Q   +D  VGPCTSLLLSE+M    +SKKDLD +   +K+ P     +PV  P T  I  
Sbjct: 241 Q--VQDNTVGPCTSLLLSEMM----SSKKDLDHENKNIKMQPNLS--YPVTAPITHTIGL 300

Query: 301 LPPTTISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFINGVAFEVGSGAFNVREAF 360
            PP  ++    T+P   + I QGVGE    G S   +STVFIN VA EVG G FN+REAF
Sbjct: 301 SPPFPLNPNSVTVPSTVNQI-QGVGESSPAGSSVAARSTVFINDVAIEVGVGPFNLREAF 360

Query: 361 GDEAVLLHSSGQPVLTNEWGLTLHSLQHGASYYLI 389
           GD+ +L+HSSGQPVLTNEWGLTLHSLQHGASYYL+
Sbjct: 361 GDDFLLIHSSGQPVLTNEWGLTLHSLQHGASYYLV 372

[Close]
BLAST of CmoCh07G002090 vs. TrEMBL
Match: A0A061GG54_THECC (Homeobox-3, putative OS=Theobroma cacao GN=TCM_029776 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 3.9e-105
Identity = 240/401 (59.85%), Postives = 271/401 (67.58%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINPNLSSSTATCLRSAPYATVGGCEERSPEPKPR 60
           MASSNRHWPSMFKSKPCN+HHQWQ DINP+L SS   C R APY +V GCEERSPEPKPR
Sbjct: 1   MASSNRHWPSMFKSKPCNTHHQWQPDINPSLMSSG--CHR-APYTSVTGCEERSPEPKPR 60

Query: 61  WNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKSKL 120
           WNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK K 
Sbjct: 61  WNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKQ 120

Query: 121 RHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSSPISAPIK 180
           R++QNSK      SQ T        PP+   T  TA +     SSSSSS+KSSP  A   
Sbjct: 121 RNLQNSK----QQSQQT--------PPMTNITTITAPS-----SSSSSSEKSSPKGANKS 180

Query: 181 TFS---------SNSMT----QNYLPQLTNELMPEPFFFPVSQTGGGGSGGSSNLSQGFC 240
           T S         SNS T    Q Y  Q  NE + EPFFFPV Q   G     +  +QGF 
Sbjct: 181 TLSMSSPNVIDVSNSPTASVNQAYFHQPQNEFLNEPFFFPVQQAAAG-----TGFTQGFV 240

Query: 241 LSELCSVVQQVPEDGVVGPCTSLLLSEIMNPTEASKKDLDEDKITVKLPPPFMNYHPVFT 300
            SEL ++V QVPE   VGPCTSLLLSEI+N    + K   E+K+ ++L    +NY     
Sbjct: 241 FSELNNMV-QVPEQ-PVGPCTSLLLSEILN--NGASKKAHEEKMKMQLQ---LNYPGSTA 300

Query: 301 PSTDNILPPTTISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFINGVAFEVGSGAF 360
           PST  I P T  +TA  T+P   + + QGVGE   +G     +S VFIN VAFEV  G F
Sbjct: 301 PSTHTISPLTASTTATITVPSNINHV-QGVGESGVVGPGGAARSAVFINDVAFEVAVGPF 360

Query: 361 NVREAFGDEAVLLHSSGQPVLTNEWGLTLHSLQHGASYYLI 389
           NVREAFGD+AVL+HSSGQPVLTNEWG+T+  LQHG  YYL+
Sbjct: 361 NVREAFGDDAVLIHSSGQPVLTNEWGVTVQPLQHGGFYYLV 368

[Close]
BLAST of CmoCh07G002090 vs. TrEMBL
Match: B9S944_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1012260 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 2.5e-104
Identity = 232/407 (57.00%), Postives = 270/407 (66.34%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHHQ-WQHDINPNLSSSTATCLRSAPYATVGGCEERSPEPKP 60
           MASSNRHWPSMFKSKPCN+HHQ WQH++N +  +ST  C R+ PYA+V GCEERSPEPKP
Sbjct: 1   MASSNRHWPSMFKSKPCNTHHQQWQHEMNSSSLASTG-CHRT-PYASVPGCEERSPEPKP 60

Query: 61  RWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKSK 120
           RWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK K
Sbjct: 61  RWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 120

Query: 121 LRHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSSP----- 180
           LR +QNS   +N   Q  T    SPI P  T      +  A + SSSSSS+K SP     
Sbjct: 121 LRLLQNSSKQHNSQQQQQTHQTTSPITPSIT------SLTAPSPSSSSSSEKCSPKCSKK 180

Query: 181 -IS------APIKTFSSNSMTQNYLPQLTNELMPEPFFFPVSQTGGGGSGGSSNLSQGFC 240
            IS        +   S+ S+ Q Y  Q  NE MPEPFFFP+ QT  G  GG+ + +QG C
Sbjct: 181 TISLSSQSVVDVSNSSTGSVNQTYFQQ-HNEFMPEPFFFPIQQTTTGAGGGTGSFTQGLC 240

Query: 241 LSELCSVVQQVPEDGVVGPCTSLLLSEIMNPTEASKKDLDEDKITVKLPPPFMNYHPVFT 300
                       ++   GPCTSLLLSEIM+  +ASKKDL  D   +K+   +++Y    T
Sbjct: 241 FQ----------DNNAAGPCTSLLLSEIMS-CDASKKDLHHDDKNMKM-QSYLSYPVSTT 300

Query: 301 PSTDN------ILPPTTISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFINGVAFE 360
           P T +       LP     T    +    + I+ GVGE  G     V +STVFIN V FE
Sbjct: 301 PITHSNTRLAPPLPFPATDTNTVAVASSMNLINHGVGESSG----AVARSTVFINDVPFE 360

Query: 361 VGSGAFNVREAFGDEAVLLHSSGQPVLTNEWGLTLHSLQHGASYYLI 389
           VG G FNVREAFGD+ +L+HSSG PVLTN+WGLTLHSLQHGASYYL+
Sbjct: 361 VGVGPFNVREAFGDDFILIHSSGHPVLTNDWGLTLHSLQHGASYYLV 382

[Close]
BLAST of CmoCh07G002090 vs. TAIR10
Match: AT2G33880.1 (AT2G33880.1 homeobox-3)

HSP 1 Score: 285.0 bits (728), Expect = 6.8e-77
Identity = 196/412 (47.57%), Postives = 253/412 (61.41%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINPNLSSSTATCLRSAPYATVGGCE-ERSPEPKP 60
           MASSNRHWPSMFKSKP    HQWQHDIN  L  S +   RS+P+++  GCE ERSPEPKP
Sbjct: 1   MASSNRHWPSMFKSKP--HPHQWQHDINSPLLPSASH--RSSPFSS--GCEVERSPEPKP 60

Query: 61  RWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKSK 120
           RWNPKPEQIRILEAIFNSGMVNPPR+EIR+IRAQLQEYGQVGDANVFYWFQNRKSRSK K
Sbjct: 61  RWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 120

Query: 121 LRHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSSPISAPI 180
           LR +     N++ +S   T P P P P          +A++++ SSSSSS  + P  +  
Sbjct: 121 LRLLH----NHSKHSLPQTQPQPQPQP----------SASSSSSSSSSSSKSTKPRKSKN 180

Query: 181 KTFSSNSMTQNYLPQLTNELMPEP-FFFPVSQTGGGGSGGSSNLSQGFCLSELCSVVQQV 240
           K  ++ S+  +   Q+     PEP F FPVS T GG  G + +   GF   ++  + QQ 
Sbjct: 181 KNNTNLSLGGS---QMMGMFPPEPAFLFPVS-TVGGFEGITVSSQLGFLSGDM--IEQQK 240

Query: 241 PEDGVVGPCTSLLLSEIMNPT---------EASKKDLDEDKITVKLPPPFM-----NYHP 300
           P       CT LLLSEIMN +           S+K+++E ++ +   P          H 
Sbjct: 241 P----APTCTGLLLSEIMNGSVSYGTHHQQHLSEKEVEEMRMKMLQQPQTQICYATTNHQ 300

Query: 301 VFTPSTDN--------ILPPTTISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFIN 360
           + + + +N        I P T+ +T +TT    SH++         L      +  VFIN
Sbjct: 301 IASYNNNNNNNNIMLHIPPTTSTATTITT----SHSLATVPSTSDQLQVQADARIRVFIN 360

Query: 361 GVAFEVGSGAFNVREAFGDEAVLLHSSGQPVLTNEWGLTLHSLQHGASYYLI 389
            +  EV SG FNVR+AFG+E VL++S+GQP++T+E+G+ LH LQHGASYYLI
Sbjct: 361 EMELEVSSGPFNVRDAFGEEVVLINSAGQPIVTDEYGVALHPLQHGASYYLI 378

[Close]
BLAST of CmoCh07G002090 vs. TAIR10
Match: AT5G45980.1 (AT5G45980.1 WUSCHEL related homeobox 8)

HSP 1 Score: 186.4 bits (472), Expect = 3.3e-47
Identity = 145/392 (36.99%), Postives = 193/392 (49.23%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINPNLSSSTATCLRSAPYATVGGCEERSPEPKPR 60
           M+SSN++WPSMFKSKPCN++H  QH+I+       + C  S+ +++     +R P+PKPR
Sbjct: 1   MSSSNKNWPSMFKSKPCNNNHHHQHEIDTPSYMHYSNCNLSSSFSS-----DRIPDPKPR 60

Query: 61  WNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKSKL 120
           WNPKPEQIRILE+IFNSG +NPPR+EI++IR +LQEYGQ+GDANVFYW            
Sbjct: 61  WNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYW------------ 120

Query: 121 RHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSS-PISAPI 180
              QN KS   H  +       SP                      S  DK+  P +   
Sbjct: 121 --FQNRKSRAKHKLRVHHK---SP--------------------KMSKKDKTVIPSTDAD 180

Query: 181 KTFSSNSMTQNYLPQLTNELM---PEPFFFPVSQTGGGGSGGSSNLSQGFCLSELCSVVQ 240
             F   +      P   NEL+   P  F FPV           S     F   +   VV 
Sbjct: 181 HCFGFVNQETGLYPVQNNELVVTEPAGFLFPVHND-------PSAAQSAFGFGDF--VVP 240

Query: 241 QVPEDGVVGPCTSLLLSEIMNPTEASKKDLDEDKITVKLPPPFMNYHPVFTPSTDNILPP 300
            V E+G+         S + N       + + DKI      P +N +        N  PP
Sbjct: 241 VVTEEGMA-------FSTVNNGVNLETNE-NFDKI------PAINLYGGDGNGGGNCFPP 300

Query: 301 TTISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFINGVAFEVGSGAFNVREAFGDE 360
            T+   +            G GE  G     V + TVFIN +  EV SG FNV+ AFG++
Sbjct: 301 LTVPLTINQSQEKRDVGLSG-GEDVGDNVYPV-RMTVFINEMPIEVVSGLFNVKAAFGND 325

Query: 361 AVLLHSSGQPVLTNEWGLTLHSLQHGASYYLI 389
           AVL++S GQP+LT+E+G+T   LQ+GA YYLI
Sbjct: 361 AVLINSFGQPILTDEFGVTYQPLQNGAIYYLI 325

[Close]
BLAST of CmoCh07G002090 vs. TAIR10
Match: AT5G17810.1 (AT5G17810.1 WUSCHEL related homeobox 12)

HSP 1 Score: 98.6 bits (244), Expect = 9.0e-21
Identity = 46/71 (64.79%), Postives = 58/71 (81.69%), Query Frame = 1 

Query: 54  SPEP-KPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNR 113
           S EP + RW+PKPEQI ILE+IFNSG VNPP+DE  +IR  L+++G VGDANVFYWFQNR
Sbjct: 14  STEPVRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQNR 73

Query: 114 KSRSKSKLRHI 124
           +SRS+ + R +
Sbjct: 74  RSRSRRRHRQL 84

[Close]
BLAST of CmoCh07G002090 vs. TAIR10
Match: AT3G03660.2 (AT3G03660.2 WUSCHEL related homeobox 11)

HSP 1 Score: 89.7 bits (221), Expect = 4.2e-18
Identity = 70/186 (37.63%), Postives = 93/186 (50.00%), Query Frame = 1 

Query: 40  RSAPYATVGGCEERSPEP-KPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYG 99
           RS P +  G     S EP + RW+PKPEQI ILE+IF+SGMVNPP++E  +IR  L+++G
Sbjct: 15  RSPPSSASGST---SAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFG 74

Query: 100 QVGDANVFYWFQNRKSRSKSKLRHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAA 159
            VGDANVFYWFQNR+SRS+ + R +Q                          A    A A
Sbjct: 75  AVGDANVFYWFQNRRSRSRRRQRQLQ--------------------------AAAAAADA 134

Query: 160 AATTCSSSSSSDKSSP-ISAPIKTFSSNSMTQNYLPQLTNELMPEPFFFPVSQTGGGGSG 219
              TC  +     S P  S     F   S + NYL   ++++    FF  +S +    S 
Sbjct: 135 TTNTCDQTMMVSNSLPHHSGSDLGFGGCSTSSNYLFGGSSQV--PSFFLGLSSSPSSCSS 169

Query: 220 GSSNLS 224
            SS  S
Sbjct: 195 SSSTSS 169

[Close]
BLAST of CmoCh07G002090 vs. TAIR10
Match: AT3G18010.1 (AT3G18010.1 WUSCHEL related homeobox 1)

HSP 1 Score: 75.9 bits (185), Expect = 6.2e-14
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 1 

Query: 60  RWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKSK 119
           RWNP P+Q+R+LE ++  G   P  D I++I AQL+ YG++   NVFYWFQN K+R + K
Sbjct: 76  RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135

Query: 120 LR 122
            R
Sbjct: 136 RR 137

[Close]
BLAST of CmoCh07G002090 vs. NCBI nr
Match: gi|659078563|ref|XP_008439789.1| (PREDICTED: WUSCHEL-related homeobox 9-like isoform X1 [Cucumis melo])

HSP 1 Score: 555.1 bits (1429), Expect = 9.9e-155
Identity = 302/394 (76.65%), Postives = 321/394 (81.47%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINPNLSSSTA--TCLRSAPYATVGGCEERSPEPK 60
           MASSNRHWPSMFKSKPCNSHHQWQHDIN    SS+A  +CLRSAPY T GGCEERSPEPK
Sbjct: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINTTSLSSSAPNSCLRSAPYTTAGGCEERSPEPK 60

Query: 61  PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKS 120
           PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK+
Sbjct: 61  PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKN 120

Query: 121 KLRHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSSPISAP 180
           KLRHIQNSKS  NHNSQTTT             T  T A A  TCSSSSSSDKSSP   P
Sbjct: 121 KLRHIQNSKS--NHNSQTTT-------------TTATTATATATCSSSSSSDKSSPQKPP 180

Query: 181 IKTF-SSNSMTQNYLPQLTNELMPEPFFFPVSQTGGGGSGGSSNLSQGFCLSELCSVVQQ 240
           IKT  S+NS+TQNYL Q TNE++P+PFFFPVS T  G  GGS NLSQGFC SELCSVVQ 
Sbjct: 181 IKTLTSNNSVTQNYLQQPTNEILPDPFFFPVSSTQTGSGGGSCNLSQGFCFSELCSVVQP 240

Query: 241 VPEDGVVGPCTSLLLSEIMNPTEASKKDLDEDKIT-VKLPPPFMNYHP--VFTPSTDNIL 300
           V E G VGPCTSLLLSEIM+PTE  KKDLD+DKI  VKL P FMN+HP  + T  TD+ L
Sbjct: 241 VAEHG-VGPCTSLLLSEIMSPTETLKKDLDQDKINMVKLQPQFMNFHPSNLTTSITDHTL 300

Query: 301 PPTTISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFINGVAFEVGSGAFNVREAFG 360
           P TTIST LTTLP P++TI QGVGEV G     VGKSTVFINGV FEV SG FNVREAFG
Sbjct: 301 PQTTISTPLTTLPSPTNTIPQGVGEVCG-----VGKSTVFINGVGFEVNSGPFNVREAFG 360

Query: 361 DEAVLLHSSGQPVLTNEWGLTLHSLQHGASYYLI 389
           DEAVL+HS+GQPVLTN+WGLTLHSLQHG+ YYLI
Sbjct: 361 DEAVLIHSNGQPVLTNDWGLTLHSLQHGSYYYLI 373

[Close]
BLAST of CmoCh07G002090 vs. NCBI nr
Match: gi|449433782|ref|XP_004134676.1| (PREDICTED: WUSCHEL-related homeobox 9 isoform X1 [Cucumis sativus])

HSP 1 Score: 551.6 bits (1420), Expect = 1.1e-153
Identity = 304/394 (77.16%), Postives = 323/394 (81.98%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINP-NLSSSTAT-CLRSAPYATVGGCEERSPEPK 60
           MASSNRHWPSMFKSKPCNSHHQWQHDIN  +LSSST T CLRSAPY TVGGCEERSPEPK
Sbjct: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINTTSLSSSTPTSCLRSAPYTTVGGCEERSPEPK 60

Query: 61  PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKS 120
           PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK+
Sbjct: 61  PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKN 120

Query: 121 KLRHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSSPISAP 180
           KLRHIQNSKSN  HNSQTTT           T+   TAA    TCSSSSSSDKSSP   P
Sbjct: 121 KLRHIQNSKSN--HNSQTTTT----------TSITATAATTTATCSSSSSSDKSSPKKPP 180

Query: 181 IKTFSSN-SMTQNYLPQLTNELMPEPFFFPVSQTGGGGSGGSSNLSQGFCLSELCSVVQQ 240
           IKT +SN S+TQNYL Q TNE++P+PFFFPVS T  G  GGS NLSQGFC SELCSVVQ 
Sbjct: 181 IKTLTSNNSVTQNYLHQPTNEILPDPFFFPVSSTQTGSGGGSCNLSQGFCFSELCSVVQP 240

Query: 241 VPEDGVVGPCTSLLLSEIMNPTEASKKDLDEDKIT-VKLPPPFMNYHPVFTPS--TDNIL 300
           V E GV GPCTSLLLSEIM+PTEA KKDLD+DKI  VK  P FMN+HP    S  TD+ L
Sbjct: 241 VAEHGV-GPCTSLLLSEIMSPTEALKKDLDQDKINMVKSQPQFMNFHPSNLTSSITDHTL 300

Query: 301 PPTTISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFINGVAFEVGSGAFNVREAFG 360
             +TIST LTTLP P++TI QGVGEV G     VGKSTVFINGV FEV SG FNVREAFG
Sbjct: 301 SQSTISTPLTTLPSPTNTIPQGVGEVCG-----VGKSTVFINGVGFEVSSGPFNVREAFG 360

Query: 361 DEAVLLHSSGQPVLTNEWGLTLHSLQHGASYYLI 389
           DEAVL+HS+GQPVLTN+WGLTLHSLQHG+ YYLI
Sbjct: 361 DEAVLIHSNGQPVLTNDWGLTLHSLQHGSYYYLI 376

[Close]
BLAST of CmoCh07G002090 vs. NCBI nr
Match: gi|778721002|ref|XP_011658233.1| (PREDICTED: WUSCHEL-related homeobox 9 isoform X2 [Cucumis sativus])

HSP 1 Score: 529.3 bits (1362), Expect = 5.8e-147
Identity = 292/391 (74.68%), Postives = 310/391 (79.28%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINP-NLSSSTAT-CLRSAPYATVGGCEERSPEPK 60
           MASSNRHWPSMFKSKPCNSHHQWQHDIN  +LSSST T CLRSAPY TVGGCEERSPEPK
Sbjct: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINTTSLSSSTPTSCLRSAPYTTVGGCEERSPEPK 60

Query: 61  PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKS 120
           PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK+
Sbjct: 61  PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKN 120

Query: 121 KLRHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSSPISAP 180
           KLRHIQNSKS  NHNSQTTT           T+   TAA    TCSSSSSSDKSSP   P
Sbjct: 121 KLRHIQNSKS--NHNSQTTT----------TTSITATAATTTATCSSSSSSDKSSPKKPP 180

Query: 181 IKTF-SSNSMTQNYLPQLTNELMPEPFFFPVSQTGGGGSGGSSNLSQGFCLSELCSVVQQ 240
           IKT  S+NS+TQNYL Q TNE++P+PFFFPVS T  G  GGS NLSQGFC SELCSVVQ 
Sbjct: 181 IKTLTSNNSVTQNYLHQPTNEILPDPFFFPVSSTQTGSGGGSCNLSQGFCFSELCSVVQP 240

Query: 241 VPEDGVVGPCTSLLLSEIMNPTEASKKDLDEDKITVKLPPPFMNYHPVFTPSTDNILPPT 300
           V E G VGPCTSLLLSEIM+PTEA KKDLD+DKI +                       +
Sbjct: 241 VAEHG-VGPCTSLLLSEIMSPTEALKKDLDQDKINM-----------------------S 300

Query: 301 TISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFINGVAFEVGSGAFNVREAFGDEA 360
           TIST LTTLP P++TI QGVGEV G     VGKSTVFINGV FEV SG FNVREAFGDEA
Sbjct: 301 TISTPLTTLPSPTNTIPQGVGEVCG-----VGKSTVFINGVGFEVSSGPFNVREAFGDEA 350

Query: 361 VLLHSSGQPVLTNEWGLTLHSLQHGASYYLI 389
           VL+HS+GQPVLTN+WGLTLHSLQHG+ YYLI
Sbjct: 361 VLIHSNGQPVLTNDWGLTLHSLQHGSYYYLI 350

[Close]
BLAST of CmoCh07G002090 vs. NCBI nr
Match: gi|659078565|ref|XP_008439790.1| (PREDICTED: WUSCHEL-related homeobox 9-like isoform X2 [Cucumis melo])

HSP 1 Score: 526.2 bits (1354), Expect = 4.9e-146
Identity = 288/391 (73.66%), Postives = 305/391 (78.01%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINPNLSSSTA--TCLRSAPYATVGGCEERSPEPK 60
           MASSNRHWPSMFKSKPCNSHHQWQHDIN    SS+A  +CLRSAPY T GGCEERSPEPK
Sbjct: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINTTSLSSSAPNSCLRSAPYTTAGGCEERSPEPK 60

Query: 61  PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKS 120
           PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK+
Sbjct: 61  PRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKN 120

Query: 121 KLRHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSSPISAP 180
           KLRHIQNSKS  NHNSQTTT             T  T A A  TCSSSSSSDKSSP   P
Sbjct: 121 KLRHIQNSKS--NHNSQTTT-------------TTATTATATATCSSSSSSDKSSPQKPP 180

Query: 181 IKTF-SSNSMTQNYLPQLTNELMPEPFFFPVSQTGGGGSGGSSNLSQGFCLSELCSVVQQ 240
           IKT  S+NS+TQNYL Q TNE++P+PFFFPVS T  G  GGS NLSQGFC SELCSVVQ 
Sbjct: 181 IKTLTSNNSVTQNYLQQPTNEILPDPFFFPVSSTQTGSGGGSCNLSQGFCFSELCSVVQP 240

Query: 241 VPEDGVVGPCTSLLLSEIMNPTEASKKDLDEDKITVKLPPPFMNYHPVFTPSTDNILPPT 300
           V E G VGPCTSLLLSEIM+PTE  KKDLD+DKI +                       T
Sbjct: 241 VAEHG-VGPCTSLLLSEIMSPTETLKKDLDQDKINM-----------------------T 300

Query: 301 TISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFINGVAFEVGSGAFNVREAFGDEA 360
           TIST LTTLP P++TI QGVGEV G     VGKSTVFINGV FEV SG FNVREAFGDEA
Sbjct: 301 TISTPLTTLPSPTNTIPQGVGEVCG-----VGKSTVFINGVGFEVNSGPFNVREAFGDEA 347

Query: 361 VLLHSSGQPVLTNEWGLTLHSLQHGASYYLI 389
           VL+HS+GQPVLTN+WGLTLHSLQHG+ YYLI
Sbjct: 361 VLIHSNGQPVLTNDWGLTLHSLQHGSYYYLI 347

[Close]
BLAST of CmoCh07G002090 vs. NCBI nr
Match: gi|823219557|ref|XP_012442511.1| (PREDICTED: WUSCHEL-related homeobox 9-like [Gossypium raimondii])

HSP 1 Score: 399.8 bits (1026), Expect = 5.3e-108
Identity = 240/402 (59.70%), Postives = 279/402 (69.40%), Query Frame = 1 

Query: 1   MASSNRHWPSMFKSKPCNSHHQWQHDINPNLSSSTATCLRSAPYATVGGCEERSPEPKPR 60
           M+SSNRHWPSMFKSKPCN+HHQWQHDINP+L SS       APY +  GCEERSPEPKPR
Sbjct: 1   MSSSNRHWPSMFKSKPCNTHHQWQHDINPSLMSSAC---HKAPYTS--GCEERSPEPKPR 60

Query: 61  WNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKSKL 120
           WNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSK KL
Sbjct: 61  WNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKL 120

Query: 121 RHIQNSKSNNNHNSQTTTAPLPSPIPPIATATITTAAAAATTCSSSSSSDKSSPISAPIK 180
           R++QNSK     N QT         PPI   T  +A +     SSSSSS+KSSP  A   
Sbjct: 121 RNLQNSKQQLQQNQQT---------PPITNMTTISAPS-----SSSSSSEKSSPKGANKS 180

Query: 181 TFS-------------SNSMTQNYLPQLTNELMPEPFFFPVSQTGGGGSGGSSNLSQGFC 240
           TFS             + S+ Q Y  Q  NE + EPFFFP+ Q  GG     S  +Q F 
Sbjct: 181 TFSLSSTNVVDVSSSPTASVNQTYFHQPQNEFLNEPFFFPMQQPAGG-----SGFTQAFG 240

Query: 241 LSELCSVVQQVPEDGVVGPCTSLLLSEIMNPTEASKKDLDEDKITVKLPPPFMNYHPVFT 300
            SEL +V+ QVPE   VGPCTSLLLSEI+    AS+K   E+K+ ++L    ++Y  + T
Sbjct: 241 FSELTNVI-QVPEQ-TVGPCTSLLLSEILT-HGASRK--GEEKMDMQLQ---LSYSTMTT 300

Query: 301 -PSTDNILPPTTISTALTTLPPPSHTIHQGVGEVYGLGQSCVGKSTVFINGVAFEVGSGA 360
            PST+ I P T  ++A  T+P  +H IH GVGE   +G   +G+STVFIN VAFEV  G 
Sbjct: 301 APSTNPIAPHTDSTSATVTVPSNTHHIH-GVGEPAAVGHGDLGRSTVFINDVAFEVTVGP 360

Query: 361 FNVREAFGDEAVLLHSSGQPVLTNEWGLTLHSLQHGASYYLI 389
           FNVREAFGD+A+L++S+GQPVLTNEWGLTL SLQHG  YYL+
Sbjct: 361 FNVREAFGDDAILINSAGQPVLTNEWGLTLQSLQHGGFYYLV 369

The following BLAST results are available for this feature:
BLAST of CmoCh07G002090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WOX9_ARATH1.2e-7547.57WUSCHEL-related homeobox 9 OS=Arabidopsis thaliana GN=WOX9 PE=2 SV=1[more]
WOX8_ARATH5.8e-4636.99WUSCHEL-related homeobox 8 OS=Arabidopsis thaliana GN=WOX8 PE=2 SV=1[more]
WOX12_ORYSJ9.3e-4454.50WUSCHEL-related homeobox 12 OS=Oryza sativa subsp. japonica GN=WOX12 PE=2 SV=2[more]
WOX7_ORYSJ4.3e-4151.85WUSCHEL-related homeobox 7 OS=Oryza sativa subsp. japonica GN=WOX7 PE=2 SV=2[more]
WOX13_ORYSJ2.6e-3051.79WUSCHEL-related homeobox 13 OS=Oryza sativa subsp. japonica GN=WOX13 PE=2 SV=1[more]
BLAST of CmoCh07G002090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLK9_CUCSA7.7e-15477.16Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518270 PE=4 SV=1[more]
A0A0D2TL52_GOSRA3.7e-10859.70Uncharacterized protein OS=Gossypium raimondii GN=B456_009G165700 PE=4 SV=1[more]
A0A067JE43_JATCU1.1e-10758.99Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21504 PE=4 SV=1[more]
A0A061GG54_THECC3.9e-10559.85Homeobox-3, putative OS=Theobroma cacao GN=TCM_029776 PE=4 SV=1[more]
B9S944_RICCO2.5e-10457.00Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1012260 PE=4 SV=1[more]
BLAST of CmoCh07G002090 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G33880.16.8e-7747.57 homeobox-3[more]
AT5G45980.13.3e-4736.99 WUSCHEL related homeobox 8[more]
AT5G17810.19.0e-2164.79 WUSCHEL related homeobox 12[more]
AT3G03660.24.2e-1837.63 WUSCHEL related homeobox 11[more]
AT3G18010.16.2e-1450.00 WUSCHEL related homeobox 1[more]
BLAST of CmoCh07G002090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659078563|ref|XP_008439789.1|9.9e-15576.65PREDICTED: WUSCHEL-related homeobox 9-like isoform X1 [Cucumis melo][more]
gi|449433782|ref|XP_004134676.1|1.1e-15377.16PREDICTED: WUSCHEL-related homeobox 9 isoform X1 [Cucumis sativus][more]
gi|778721002|ref|XP_011658233.1|5.8e-14774.68PREDICTED: WUSCHEL-related homeobox 9 isoform X2 [Cucumis sativus][more]
gi|659078565|ref|XP_008439790.1|4.9e-14673.66PREDICTED: WUSCHEL-related homeobox 9-like isoform X2 [Cucumis melo][more]
gi|823219557|ref|XP_012442511.1|5.3e-10859.70PREDICTED: WUSCHEL-related homeobox 9-like [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044699 single-organism process
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0044424 intracellular part
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G002090.1CmoCh07G002090.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 58..117
score: 2.9
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 56..123
score: 2.
IPR001356Homeobox domainPROFILEPS50071HOMEOBOX_2coord: 54..119
score: 10
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 57..125
score: 6.
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 54..121
score: 1.2
NoneNo IPR availablePANTHERPTHR24326FAMILY NOT NAMEDcoord: 259..273
score: 3.6E-72coord: 2..26
score: 3.6E-72coord: 46..135
score: 3.6
NoneNo IPR availablePANTHERPTHR24326:SF212SUBFAMILY NOT NAMEDcoord: 259..273
score: 3.6E-72coord: 2..26
score: 3.6E-72coord: 46..135
score: 3.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G002090Cucsa.046640Cucumber (Gy14) v1cgycmoB0043
CmoCh07G002090CmaCh03G013050Cucurbita maxima (Rimu)cmacmoB672
CmoCh07G002090CmaCh07G002090Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G002090Cla009659Watermelon (97103) v1cmowmB816
CmoCh07G002090Csa6G518270Cucumber (Chinese Long) v2cmocuB865
CmoCh07G002090MELO3C007244Melon (DHL92) v3.5.1cmomeB782
CmoCh07G002090ClCG01G023420Watermelon (Charleston Gray)cmowcgB755
CmoCh07G002090CSPI06G35050Wild cucumber (PI 183967)cmocpiB873
CmoCh07G002090Lsi01G002720Bottle gourd (USVL1VR-Ls)cmolsiB774
CmoCh07G002090Cp4.1LG10g05160Cucurbita pepo (Zucchini)cmocpeB801
CmoCh07G002090Cp4.1LG19g06930Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G002090MELO3C007244.2Melon (DHL92) v3.6.1cmomedB886
CmoCh07G002090CsaV3_6G050540Cucumber (Chinese Long) v3cmocucB1019
CmoCh07G002090Cla97C01G023280Watermelon (97103) v2cmowmbB849
CmoCh07G002090Bhi03G000270Wax gourdcmowgoB1051
CmoCh07G002090CsGy6G034570Cucumber (Gy14) v2cgybcmoB843
CmoCh07G002090Carg07752Silver-seed gourdcarcmoB0888
CmoCh07G002090Carg15323Silver-seed gourdcarcmoB0745
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh07G002090CmoCh03G013010Cucurbita moschata (Rifu)cmocmoB459
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G002090Cucurbita moschata (Rifu)cmocmoB190
CmoCh07G002090Cucurbita maxima (Rimu)cmacmoB240
CmoCh07G002090Melon (DHL92) v3.5.1cmomeB771
CmoCh07G002090Watermelon (Charleston Gray)cmowcgB760
CmoCh07G002090Watermelon (97103) v1cmowmB809
CmoCh07G002090Cucurbita pepo (Zucchini)cmocpeB818
CmoCh07G002090Bottle gourd (USVL1VR-Ls)cmolsiB783
CmoCh07G002090Melon (DHL92) v3.6.1cmomedB875
CmoCh07G002090Silver-seed gourdcarcmoB1270
CmoCh07G002090Watermelon (97103) v2cmowmbB857
CmoCh07G002090Wax gourdcmowgoB1074