CmoCh07G002070 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G002070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ethylene-responsive transcription factor, putative
Location	Cmo_Chr07 : 1043426 .. 1043917 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTAGCTTCCCATTCCGATTTGCCTTTTAATGAGAACGATTCTCAAGATATGGTCATTTACCAAGTTCTGAACCAACCCATGTCTTCCCATAACTCTACAACCCTTCCCTCCGCCGATCAGCCCAACACCAACGCCGCCGCTCGCCATCACAATTCCGCTGCTGGAGGCATTGCCAAGAAGCACTACAGAGGAGTCCGCCGACGTCCCTGGGGAAAGTACGCAGCCGAGATACGTGACTCCACGCGGCAAGGCGTGCGCGTCTGGCTTGGCACCTTCGCTACCGCTGAGGAGGCTGCTTTGGCTTATGATAGAGCCGCTTTCAATATGAGAGGCCCCAAAGCGCTTCTCAATTTCCCGCCGGAGGTCGTTGCAGCGGCGGCCGCGGCGGACACGACGACGACGACACCTCCGCCGAGTGGTAGTAGCTCGAGCACCGTTTCAATGGCGACTTCAAGATCAGAATCAGTTAGAAGAGCTGCTGAATAG

mRNA sequence

ATGGTTTTAGCTTCCCATTCCGATTTGCCTTTTAATGAGAACGATTCTCAAGATATGGTCATTTACCAAGTTCTGAACCAACCCATGTCTTCCCATAACTCTACAACCCTTCCCTCCGCCGATCAGCCCAACACCAACGCCGCCGCTCGCCATCACAATTCCGCTGCTGGAGGCATTGCCAAGAAGCACTACAGAGGAGTCCGCCGACGTCCCTGGGGAAAGTACGCAGCCGAGATACGTGACTCCACGCGGCAAGGCGTGCGCGTCTGGCTTGGCACCTTCGCTACCGCTGAGGAGGCTGCTTTGGCTTATGATAGAGCCGCTTTCAATATGAGAGGCCCCAAAGCGCTTCTCAATTTCCCGCCGGAGGTCGTTGCAGCGGCGGCCGCGGCGGACACGACGACGACGACACCTCCGCCGAGTGGTAGTAGCTCGAGCACCGTTTCAATGGCGACTTCAAGATCAGAATCAGTTAGAAGAGCTGCTGAATAG

Coding sequence (CDS)

ATGGTTTTAGCTTCCCATTCCGATTTGCCTTTTAATGAGAACGATTCTCAAGATATGGTCATTTACCAAGTTCTGAACCAACCCATGTCTTCCCATAACTCTACAACCCTTCCCTCCGCCGATCAGCCCAACACCAACGCCGCCGCTCGCCATCACAATTCCGCTGCTGGAGGCATTGCCAAGAAGCACTACAGAGGAGTCCGCCGACGTCCCTGGGGAAAGTACGCAGCCGAGATACGTGACTCCACGCGGCAAGGCGTGCGCGTCTGGCTTGGCACCTTCGCTACCGCTGAGGAGGCTGCTTTGGCTTATGATAGAGCCGCTTTCAATATGAGAGGCCCCAAAGCGCTTCTCAATTTCCCGCCGGAGGTCGTTGCAGCGGCGGCCGCGGCGGACACGACGACGACGACACCTCCGCCGAGTGGTAGTAGCTCGAGCACCGTTTCAATGGCGACTTCAAGATCAGAATCAGTTAGAAGAGCTGCTGAATAG

Homology

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BLAST of CmoCh07G002070 vs. Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-31
Identity = 89/159 (55.97%), Postives = 102/159 (64.15%), Query Frame = 1


Query: 1   MVLASHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIA 60
           MV    SDLP NENDSQ+MV+Y+VLN+     N+  +P   Q N      +       I 
Sbjct: 1   MVPTPQSDLPLNENDSQEMVLYEVLNEA----NALNIPYLPQRNQLLPRNNILRPLQCIG 60

Query: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120
           KK YRGVRRRPWGKYAAEIRDS R G RVWLGTF TAEEAALAYDRAAF MRG KALLNF
Sbjct: 61  KK-YRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNF 120

Query: 121 PPEVVAAAAAAD------TTTTTPPPSGSSSSTVSMATS 154
           P E+V A+ + D       + TT   S SS + VS  T+
Sbjct: 121 PSEIVNASVSVDKLSLCSNSYTTNNNSDSSLNEVSSGTN 154

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BLAST of CmoCh07G002070 vs. Swiss-Prot
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=1 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 4.8e-26
Identity = 65/122 (53.28%), Postives = 85/122 (69.67%), Query Frame = 1


Query: 4   ASHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIAKKH 63
           +++  LPFNENDS++M +Y ++ Q  +        S D P  + ++R         ++K 
Sbjct: 31  SNNYSLPFNENDSEEMFLYGLIEQS-TQQTYIDSDSQDLPIKSVSSRK--------SEKS 90

Query: 64  YRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNFPPE 123
           YRGVRRRPWGK+AAEIRDSTR G+RVWLGTF +AEEAALAYD+AAF+MRG  A+LNF  E
Sbjct: 91  YRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAE 143

Query: 124 VV 126
            V
Sbjct: 151 RV 143

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BLAST of CmoCh07G002070 vs. Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24
Identity = 63/118 (53.39%), Postives = 76/118 (64.41%), Query Frame = 1


Query: 7   SDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQP---NTNAAARHHNSAAGGIAKKH 66
           SDLP + +DSQDM IY  L   +SS  + ++P    P   N   A +   S A       
Sbjct: 32  SDLPLSVDDSQDMAIYNTLRDAVSSGWTPSVPPVTSPAEENKPPATKASGSHAPRQKGMQ 91

Query: 67  YRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNFP 122
           YRGVRRRPWGK+AAEIRD  + G RVWLGT+ T E+AA+AYDRAAF +RG KA LNFP
Sbjct: 92  YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149

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BLAST of CmoCh07G002070 vs. Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23
Identity = 76/167 (45.51%), Postives = 94/167 (56.29%), Query Frame = 1


Query: 5   SHSDLPFNENDSQDMVIYQVLNQPMSSHNSTT-------LPSAD-QPNTNAAARHHNSAA 64
           S   LP  ENDS+DM++Y +L        S++        P+   +P  N  A       
Sbjct: 44  SWGGLPLKENDSEDMLVYGLLKDAFHFDTSSSDLSCLFDFPAVKVEPTENFTAMEEKPKK 103

Query: 65  G------GIAKKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFN 124
                   +  KHYRGVR+RPWGK+AAEIRD  + G RVWLGTF TAE+AALAYD AAF 
Sbjct: 104 AIPVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFR 163

Query: 125 MRGPKALLNFPPEVVAAAAAADTTTTTPPPSGSSSSTVSMATSRSES 158
           MRG +ALLNFP  V   +   D    T   S SSSS+ S +TS SE+
Sbjct: 164 MRGSRALLNFPLRV--NSGEPDPVRITSKRSSSSSSSSSSSTSSSEN 208

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BLAST of CmoCh07G002070 vs. Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 5.0e-23
Identity = 82/176 (46.59%), Postives = 101/176 (57.39%), Query Frame = 1


Query: 5   SHSDLPFNENDSQDMVIYQVLN-------QPMSSHNS---TTLPSA--DQPNTNAAA--- 64
           S  DLP  ENDS+DM++Y +LN       +P SS +    ++ PS   + P + AA    
Sbjct: 67  SWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESFAAVDSV 126

Query: 65  ------RHHNSAAGGIAK-KHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAAL 124
                     SAA   AK KHYRGVR+RPWGK+AAEIRD  + G RVWLGTF TAE+AAL
Sbjct: 127 PVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAAL 186

Query: 125 AYDRAAFNMRGPKALLNFPPEVVAAAAAADTTTTTPPPSGSSSSTVSMATSRSESV 159
           AYDRAAF MRG +ALLNFP  V   +   D        S  SSS  + A  +  +V
Sbjct: 187 AYDRAAFRMRGSRALLNFPLRV--NSGEPDPVRIKSKRSSFSSSNENGAPKKRRTV 240

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BLAST of CmoCh07G002070 vs. TrEMBL
Match: A0A0A0KKA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518290 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.1e-52
Identity = 130/179 (72.63%), Postives = 141/179 (78.77%), Query Frame = 1


Query: 1   MVLASH--SDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSAD-QPNTNA-----AARHH 60
           MVL S+  SDLPFNENDS+DMVIYQVLN PMSSH+  TLP+AD QPN NA     A+   
Sbjct: 1   MVLGSNAQSDLPFNENDSEDMVIYQVLNSPMSSHS--TLPAADDQPNANANANANASHRL 60

Query: 61  NSAAGGIAKKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMR 120
           N  A  IAKKHYRGVR+RPWGKYAAEIRDSTR G RVWLGTFATAEEAALAYD AAF MR
Sbjct: 61  NPPARTIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFTMR 120

Query: 121 GPKALLNFPPEVVAAAAAADTTTTTPP--------PSGSSSSTVSMATSRSESVRRAAE 164
           G KALLNFPPEVVAAAAAA TTTT+PP        P GSSSST+S+ATSR+ES  +A E
Sbjct: 121 GSKALLNFPPEVVAAAAAAKTTTTSPPSKRKPNVEPCGSSSSTISLATSRTESDCKAPE 177

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BLAST of CmoCh07G002070 vs. TrEMBL
Match: B9S948_RICCO (Ethylene-responsive transcription factor, putative OS=Ricinus communis GN=RCOM_1012500 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.6e-39
Identity = 102/166 (61.45%), Postives = 122/166 (73.49%), Query Frame = 1


Query: 1   MVLASHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIA 60
           MV  S ++LPFNENDSQDMVIYQ++N+  ++ N++ +P   Q N++    H    A  IA
Sbjct: 1   MVFTSQNELPFNENDSQDMVIYQMINEGATAPNNSNMPPRSQINSS----HMFPPAKVIA 60

Query: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120
           KKHYRGVRRRPWGKYAAEIRDS R G RVWLGTF TAEEAALAYDRAAF MRG KALLNF
Sbjct: 61  KKHYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNF 120

Query: 121 PPEVVAAAAAA-----DTTTTTP----PPSGSSSSTVSMATSRSES 158
           P EVVAA +A      + +TT        SGSSSS+VS++TS+SE+
Sbjct: 121 PAEVVAATSAGFKPNLNLSTTLSRNNFESSGSSSSSVSVSTSQSET 162

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BLAST of CmoCh07G002070 vs. TrEMBL
Match: A0A067JB51_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21507 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.5e-38
Identity = 97/161 (60.25%), Postives = 114/161 (70.81%), Query Frame = 1


Query: 1   MVLASHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIA 60
           MV  S S+LPFNENDSQDMV+YQ++N+ +S + S  LP   +   N + R        +A
Sbjct: 1   MVFTSQSELPFNENDSQDMVVYQMINESISFNTSNMLP---RNQINTSNRFQLQPTKTVA 60

Query: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120
           KKHYRGVRRRPWGK+AAEIRDSTR G RVWLGTF TAEEAALAYDRAAF MRG KALLNF
Sbjct: 61  KKHYRGVRRRPWGKFAAEIRDSTRHGARVWLGTFQTAEEAALAYDRAAFRMRGSKALLNF 120

Query: 121 PPEVVAAAAAADTTTTTPPPSGSS---SSTVSMATSRSESV 159
           P EVVAAAAA + +     P+  +   SS VS + S S +V
Sbjct: 121 PAEVVAAAAATNNSPQKFKPNSENSGGSSNVSQSESESSTV 158

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BLAST of CmoCh07G002070 vs. TrEMBL
Match: A0A067GDV2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031071mg PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.1e-36
Identity = 98/170 (57.65%), Postives = 116/170 (68.24%), Query Frame = 1


Query: 1   MVLASHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIA 60
           M  AS  +LPFNENDSQDMVIYQV+N+  ++ N + +P   + +T++      +    I+
Sbjct: 1   MFPASQIELPFNENDSQDMVIYQVINES-TAQNISFMPQRSEVHTSSMLEPKRT----IS 60

Query: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120
           KKHYRGVRRRPWGK+AAEIRDS R G R+WLGTF TAEEAALAYDRAAF MRG KALLNF
Sbjct: 61  KKHYRGVRRRPWGKFAAEIRDSARHGQRIWLGTFETAEEAALAYDRAAFRMRGAKALLNF 120

Query: 121 PPEVVAAAAAADTTT-------------TTPPPSGSSSSTVSMATSRSES 158
           P EVVAA   + + +               P  SGSSSSTVS AT RSES
Sbjct: 121 PAEVVAAPCPSSSPSLEKSNVKLSSILENNPEVSGSSSSTVSTATQRSES 165

[Close]

BLAST of CmoCh07G002070 vs. TrEMBL
Match: V4W8Y1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016995mg PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.7e-36
Identity = 98/170 (57.65%), Postives = 116/170 (68.24%), Query Frame = 1


Query: 1   MVLASHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIA 60
           M  AS  +LPFNENDSQDMVIYQV+N+  ++ N + +P   + +T+       +    I+
Sbjct: 1   MFPASQIELPFNENDSQDMVIYQVINES-TAQNISFMPQRSEVHTSNMLEPKRT----IS 60

Query: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120
           KKHYRGVRRRPWGK+AAEIRDS R G R+WLGTF TAEEAALAYDRAAF MRG KALLNF
Sbjct: 61  KKHYRGVRRRPWGKFAAEIRDSARHGQRIWLGTFETAEEAALAYDRAAFRMRGAKALLNF 120

Query: 121 PPEVVAAAAAADTTT-------------TTPPPSGSSSSTVSMATSRSES 158
           P EVVAA  ++ + +               P  SGSSSSTVS AT RSES
Sbjct: 121 PAEVVAAPCSSSSPSLEKSNVNLSSILENNPEVSGSSSSTVSTATQRSES 165

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BLAST of CmoCh07G002070 vs. TAIR10
Match: AT3G23240.1 (AT3G23240.1 ethylene response factor 1)

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-27
Identity = 65/122 (53.28%), Postives = 85/122 (69.67%), Query Frame = 1


Query: 4   ASHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIAKKH 63
           +++  LPFNENDS++M +Y ++ Q  +        S D P  + ++R         ++K 
Sbjct: 31  SNNYSLPFNENDSEEMFLYGLIEQS-TQQTYIDSDSQDLPIKSVSSRK--------SEKS 90

Query: 64  YRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNFPPE 123
           YRGVRRRPWGK+AAEIRDSTR G+RVWLGTF +AEEAALAYD+AAF+MRG  A+LNF  E
Sbjct: 91  YRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAE 143

Query: 124 VV 126
            V
Sbjct: 151 RV 143

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BLAST of CmoCh07G002070 vs. TAIR10
Match: AT2G44840.1 (AT2G44840.1 ethylene-responsive element binding factor 13)

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 63/118 (53.39%), Postives = 76/118 (64.41%), Query Frame = 1


Query: 7   SDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQP---NTNAAARHHNSAAGGIAKKH 66
           SDLP + +DSQDM IY  L   +SS  + ++P    P   N   A +   S A       
Sbjct: 32  SDLPLSVDDSQDMAIYNTLRDAVSSGWTPSVPPVTSPAEENKPPATKASGSHAPRQKGMQ 91

Query: 67  YRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNFP 122
           YRGVRRRPWGK+AAEIRD  + G RVWLGT+ T E+AA+AYDRAAF +RG KA LNFP
Sbjct: 92  YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149

[Close]

BLAST of CmoCh07G002070 vs. TAIR10
Match: AT5G47220.1 (AT5G47220.1 ethylene responsive element binding factor 2)

HSP 1 Score: 110.9 bits (276), Expect = 7.4e-25
Identity = 76/167 (45.51%), Postives = 94/167 (56.29%), Query Frame = 1


Query: 5   SHSDLPFNENDSQDMVIYQVLNQPMSSHNSTT-------LPSAD-QPNTNAAARHHNSAA 64
           S   LP  ENDS+DM++Y +L        S++        P+   +P  N  A       
Sbjct: 44  SWGGLPLKENDSEDMLVYGLLKDAFHFDTSSSDLSCLFDFPAVKVEPTENFTAMEEKPKK 103

Query: 65  G------GIAKKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFN 124
                   +  KHYRGVR+RPWGK+AAEIRD  + G RVWLGTF TAE+AALAYD AAF 
Sbjct: 104 AIPVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFR 163

Query: 125 MRGPKALLNFPPEVVAAAAAADTTTTTPPPSGSSSSTVSMATSRSES 158
           MRG +ALLNFP  V   +   D    T   S SSSS+ S +TS SE+
Sbjct: 164 MRGSRALLNFPLRV--NSGEPDPVRITSKRSSSSSSSSSSSTSSSEN 208

[Close]

BLAST of CmoCh07G002070 vs. TAIR10
Match: AT4G17500.1 (AT4G17500.1 ethylene responsive element binding factor 1)

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-24
Identity = 82/176 (46.59%), Postives = 101/176 (57.39%), Query Frame = 1


Query: 5   SHSDLPFNENDSQDMVIYQVLN-------QPMSSHNS---TTLPSA--DQPNTNAAA--- 64
           S  DLP  ENDS+DM++Y +LN       +P SS +    ++ PS   + P + AA    
Sbjct: 67  SWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESFAAVDSV 126

Query: 65  ------RHHNSAAGGIAK-KHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAAL 124
                     SAA   AK KHYRGVR+RPWGK+AAEIRD  + G RVWLGTF TAE+AAL
Sbjct: 127 PVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAAL 186

Query: 125 AYDRAAFNMRGPKALLNFPPEVVAAAAAADTTTTTPPPSGSSSSTVSMATSRSESV 159
           AYDRAAF MRG +ALLNFP  V   +   D        S  SSS  + A  +  +V
Sbjct: 187 AYDRAAFRMRGSRALLNFPLRV--NSGEPDPVRIKSKRSSFSSSNENGAPKKRRTV 240

[Close]

BLAST of CmoCh07G002070 vs. TAIR10
Match: AT1G06160.1 (AT1G06160.1 octadecanoid-responsive Arabidopsis AP2/ERF 59)

HSP 1 Score: 103.2 bits (256), Expect = 1.5e-22
Identity = 48/65 (73.85%), Postives = 58/65 (89.23%), Query Frame = 1


Query: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120
           +K YRGVR+RPWGK+AAEIRDSTR+G+RVWLGTF TAE AALAYD+AAF ++G  A+LNF
Sbjct: 79  EKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYDQAAFALKGSLAVLNF 138

Query: 121 PPEVV 126
           P +VV
Sbjct: 139 PADVV 143

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BLAST of CmoCh07G002070 vs. NCBI nr
Match: gi|659078559|ref|XP_008439787.1| (PREDICTED: pathogenesis-related genes transcriptional activator PTI5-like [Cucumis melo])

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-53
Identity = 130/174 (74.71%), Postives = 138/174 (79.31%), Query Frame = 1


Query: 1   MVLASHSD---LPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAG 60
           MVL SH+    LPFNENDSQDMVIYQVLN PMSSH ST  P+ DQPN N++ R  N  A 
Sbjct: 1   MVLGSHTPQAGLPFNENDSQDMVIYQVLNSPMSSH-STLPPADDQPNANSS-RRLNPPAR 60

Query: 61  GIAKKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKAL 120
            IAKKHYRGVR+RPWGKYAAEIRDSTR G RVWLGTFATAEEAALAYD AAF MRGPKAL
Sbjct: 61  TIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFRMRGPKAL 120

Query: 121 LNFPPEVVAAAAAADTTTTTPP--------PSGSSSSTVSMATSRSESVRRAAE 164
           LNFPPEVVAAAAAA TTTT+PP        P GSSSST+S+ATSRSES   A E
Sbjct: 121 LNFPPEVVAAAAAAKTTTTSPPSKRKPNAEPWGSSSSTISLATSRSESDCSAPE 172

[Close]

BLAST of CmoCh07G002070 vs. NCBI nr
Match: gi|778721013|ref|XP_004134941.2| (PREDICTED: pathogenesis-related genes transcriptional activator PTI5-like [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 3.0e-52
Identity = 130/179 (72.63%), Postives = 141/179 (78.77%), Query Frame = 1


Query: 1   MVLASH--SDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSAD-QPNTNA-----AARHH 60
           MVL S+  SDLPFNENDS+DMVIYQVLN PMSSH+  TLP+AD QPN NA     A+   
Sbjct: 1   MVLGSNAQSDLPFNENDSEDMVIYQVLNSPMSSHS--TLPAADDQPNANANANANASHRL 60

Query: 61  NSAAGGIAKKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMR 120
           N  A  IAKKHYRGVR+RPWGKYAAEIRDSTR G RVWLGTFATAEEAALAYD AAF MR
Sbjct: 61  NPPARTIAKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFTMR 120

Query: 121 GPKALLNFPPEVVAAAAAADTTTTTPP--------PSGSSSSTVSMATSRSESVRRAAE 164
           G KALLNFPPEVVAAAAAA TTTT+PP        P GSSSST+S+ATSR+ES  +A E
Sbjct: 121 GSKALLNFPPEVVAAAAAAKTTTTSPPSKRKPNVEPCGSSSSTISLATSRTESDCKAPE 177

[Close]

BLAST of CmoCh07G002070 vs. NCBI nr
Match: gi|1009106376|ref|XP_015874196.1| (PREDICTED: pathogenesis-related genes transcriptional activator PTI5-like [Ziziphus jujuba])

HSP 1 Score: 172.9 bits (437), Expect = 4.5e-40
Identity = 103/164 (62.80%), Postives = 118/164 (71.95%), Query Frame = 1


Query: 1   MVLASHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIA 60
           MVLAS S+LP NENDSQDMVIYQVLN+ M+  N + LP   Q N + +      A   I 
Sbjct: 1   MVLASQSELPLNENDSQDMVIYQVLNEAMAL-NGSLLPQRHQTNQSTSLE----AGKSIG 60

Query: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120
           KKHYRGVRRRPWGKYAAEIRDS R G RVWLGTF TAEEAALAYD+AAF MRG KALLNF
Sbjct: 61  KKHYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDKAAFRMRGAKALLNF 120

Query: 121 PPEVVAAAAAADTT-------TTTPPPSGSSSSTVSMATSRSES 158
           P EVVAAA+++ TT       T+  P S   SS +S+ +SRS+S
Sbjct: 121 PAEVVAAASSSSTTIQRVKPNTSNNPDSSGDSSLLSIGSSRSDS 159

[Close]

BLAST of CmoCh07G002070 vs. NCBI nr
Match: gi|255563026|ref|XP_002522517.1| (PREDICTED: pathogenesis-related genes transcriptional activator PTI5 [Ricinus communis])

HSP 1 Score: 169.9 bits (429), Expect = 3.8e-39
Identity = 102/166 (61.45%), Postives = 122/166 (73.49%), Query Frame = 1


Query: 1   MVLASHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIA 60
           MV  S ++LPFNENDSQDMVIYQ++N+  ++ N++ +P   Q N++    H    A  IA
Sbjct: 1   MVFTSQNELPFNENDSQDMVIYQMINEGATAPNNSNMPPRSQINSS----HMFPPAKVIA 60

Query: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120
           KKHYRGVRRRPWGKYAAEIRDS R G RVWLGTF TAEEAALAYDRAAF MRG KALLNF
Sbjct: 61  KKHYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNF 120

Query: 121 PPEVVAAAAAA-----DTTTTTP----PPSGSSSSTVSMATSRSES 158
           P EVVAA +A      + +TT        SGSSSS+VS++TS+SE+
Sbjct: 121 PAEVVAATSAGFKPNLNLSTTLSRNNFESSGSSSSSVSVSTSQSET 162

[Close]

BLAST of CmoCh07G002070 vs. NCBI nr
Match: gi|802786547|ref|XP_012091701.1| (PREDICTED: pathogenesis-related genes transcriptional activator PTI5-like [Jatropha curcas])

HSP 1 Score: 165.2 bits (417), Expect = 9.3e-38
Identity = 97/161 (60.25%), Postives = 114/161 (70.81%), Query Frame = 1


Query: 1   MVLASHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIA 60
           MV  S S+LPFNENDSQDMV+YQ++N+ +S + S  LP   +   N + R        +A
Sbjct: 1   MVFTSQSELPFNENDSQDMVVYQMINESISFNTSNMLP---RNQINTSNRFQLQPTKTVA 60

Query: 61  KKHYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNF 120
           KKHYRGVRRRPWGK+AAEIRDSTR G RVWLGTF TAEEAALAYDRAAF MRG KALLNF
Sbjct: 61  KKHYRGVRRRPWGKFAAEIRDSTRHGARVWLGTFQTAEEAALAYDRAAFRMRGSKALLNF 120

Query: 121 PPEVVAAAAAADTTTTTPPPSGSS---SSTVSMATSRSESV 159
           P EVVAAAAA + +     P+  +   SS VS + S S +V
Sbjct: 121 PAEVVAAAAATNNSPQKFKPNSENSGGSSNVSQSESESSTV 158

The following BLAST results are available for this feature:

BLAST of CmoCh07G002070 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PTI5_SOLLC	1.3e-31	55.97	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]
ERF92_ARATH	4.8e-26	53.28	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=...	[more]
ERF99_ARATH	2.0e-24	53.39	Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=...	[more]
EF101_ARATH	1.3e-23	45.51	Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 ...	[more]
EF100_ARATH	5.0e-23	46.59	Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=...	[more]

BLAST of CmoCh07G002070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKA5_CUCSA	2.1e-52	72.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518290 PE=4 SV=1	[more]
B9S948_RICCO	2.6e-39	61.45	Ethylene-responsive transcription factor, putative OS=Ricinus communis GN=RCOM_1...	[more]
A0A067JB51_JATCU	6.5e-38	60.25	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21507 PE=4 SV=1	[more]
A0A067GDV2_CITSI	2.1e-36	57.65	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031071mg PE=4 SV=1	[more]
V4W8Y1_9ROSI	2.7e-36	57.65	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016995mg PE=4 SV=1	[more]

BLAST of CmoCh07G002070 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23240.1	2.7e-27	53.28	ethylene response factor 1	[more]
AT2G44840.1	1.1e-25	53.39	ethylene-responsive element binding factor 13	[more]
AT5G47220.1	7.4e-25	45.51	ethylene responsive element binding factor 2	[more]
AT4G17500.1	2.8e-24	46.59	ethylene responsive element binding factor 1	[more]
AT1G06160.1	1.5e-22	73.85	octadecanoid-responsive Arabidopsis AP2/ERF 59	[more]

BLAST of CmoCh07G002070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659078559\|ref\|XP_008439787.1\|	2.7e-53	74.71	PREDICTED: pathogenesis-related genes transcriptional activator PTI5-like [Cucum...	[more]
gi\|778721013\|ref\|XP_004134941.2\|	3.0e-52	72.63	PREDICTED: pathogenesis-related genes transcriptional activator PTI5-like [Cucum...	[more]
gi\|1009106376\|ref\|XP_015874196.1\|	4.5e-40	62.80	PREDICTED: pathogenesis-related genes transcriptional activator PTI5-like [Zizip...	[more]
gi\|255563026\|ref\|XP_002522517.1\|	3.8e-39	61.45	PREDICTED: pathogenesis-related genes transcriptional activator PTI5 [Ricinus co...	[more]
gi\|802786547\|ref\|XP_012091701.1\|	9.3e-38	60.25	PREDICTED: pathogenesis-related genes transcriptional activator PTI5-like [Jatro...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G002070.1	CmoCh07G002070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 87..103 score: 5.2E-11coord: 64..75 score: 5.2
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 62..121 score: 1.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 63..113 score: 1.0
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 63..127 score: 1.6
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 63..121 score: 23
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 63..123 score: 2.55
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 5..160 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G002070	CmaCh07G002070	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G002070	Cla009661	Watermelon (97103) v1	cmowmB816
CmoCh07G002070	Csa6G518290	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G002070	ClCG01G023440	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G002070	CSPI06G35070	Wild cucumber (PI 183967)	cmocpiB873

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G002070	Cucumber (Chinese Long) v3	cmocucB1019
CmoCh07G002070	Watermelon (97103) v2	cmowmbB849
CmoCh07G002070	Watermelon (97103) v2	cmowmbB857
CmoCh07G002070	Wax gourd	cmowgoB1051
CmoCh07G002070	Wax gourd	cmowgoB1074
CmoCh07G002070	Cucurbita moschata (Rifu)	cmocmoB190
CmoCh07G002070	Cucurbita moschata (Rifu)	cmocmoB459
CmoCh07G002070	Cucumber (Gy14) v1	cgycmoB0043
CmoCh07G002070	Cucurbita maxima (Rimu)	cmacmoB240
CmoCh07G002070	Cucurbita maxima (Rimu)	cmacmoB672
CmoCh07G002070	Melon (DHL92) v3.5.1	cmomeB771
CmoCh07G002070	Melon (DHL92) v3.5.1	cmomeB782
CmoCh07G002070	Watermelon (Charleston Gray)	cmowcgB760
CmoCh07G002070	Watermelon (97103) v1	cmowmB809
CmoCh07G002070	Cucurbita pepo (Zucchini)	cmocpeB801
CmoCh07G002070	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G002070	Cucurbita pepo (Zucchini)	cmocpeB818
CmoCh07G002070	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G002070	Bottle gourd (USVL1VR-Ls)	cmolsiB783
CmoCh07G002070	Cucumber (Gy14) v2	cgybcmoB843
CmoCh07G002070	Melon (DHL92) v3.6.1	cmomedB875
CmoCh07G002070	Melon (DHL92) v3.6.1	cmomedB886
CmoCh07G002070	Silver-seed gourd	carcmoB0745
CmoCh07G002070	Silver-seed gourd	carcmoB0888
CmoCh07G002070	Silver-seed gourd	carcmoB1270