CmoCh07G001610 (gene) Cucurbita moschata (Rifu)

NameCmoCh07G001610
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr07 : 860154 .. 861127 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCATCTCTCGGATTATCTGCTCTGGAGTGAGCTTCAGTCTGGTGAATTTATGGTAATCAAGTATAAATGATTTCTTTGGTTGATTAGAAGCTATCTTTTCTTGCGTGCAGGTTTCATTTTCACTCCCATCTTCCTCAGGATGTGTGGCAGCTTATGACATAATGAATATTGAGCATATGTATATACTTTTCCTCCAGGAATCCATGAATATGATGATGCAGTTAAACGTGGGGAAATTAGTCTTTCTTCTTCCAGAGCATTTGCACAGAATACACAAGTAGTTCTAACTTGCTCTTCCTTTTCAGGATGCCAAGCAATTCTATACCCTCAAACAATCACAGTGCATGAGAACTGTTTTTGGTATATAAACTAAGCTTCTCTGCTGCTACATACACTCACTAACCGTTAAAGTTCTTCGTTGAAGGCTTGAAACATTATTGGCTCCAGGCTGCCGTCAAGTGGGGTGAAATTGAGTGTACAAGAACTGTTTTTCAAAATTTTATGTATAAGAATAGTAATACAACATTTGTCTACAAGTTATGCAACAAGTGTATTAGAAAGTGTTATCCAATGGGCTTGAAAAGTCTAAACGAATTTGAAATCTAAGAAAACCATTGGTTCTAAAAGAATCACTTAGGAACCATACAAGAGGAAGAGTGGACACCACATCTTTCAACCGCCAACATCCAACATTGACTGATACGAAATTGTCTATTAACAGTTCGATTGAAGTCTATCAGGTTTTTGTTTATAACATCATTATTGCTGTTTTTCAATAGCTCACGAAGTGAAGCAACCCGATCTTTTACGAAAATAGTTTAGTTGAAATAATCCTCTTCAACTGCAGGGACGATCATTCACTAAATCCACTTTCTGGATAGCTATTTCTTGCCATAATCTGCAAGATCACAGCACTTGGTTGAGTGAAGCTGAAAAGCAATGGTCAAATTGTCACATCGTCTATGTATGA

mRNA sequence

ATGTTCATCTCTCGGATTATCTGCTCTGGAGTGAGCTTCAGTCTGGTTTCATTTTCACTCCCATCTTCCTCAGGATGTGTGGCAGCTTATGACATAATGAATATTGAGCATATGTATATACTTTTCCTCCAGGAATCCATGAATATGATGATGCAGTTAAACGATGCCAAGCAATTCTATACCCTCAAACAATCACAGTGCATGAGAACTGTTTTTGGCTTGAAACATTATTGGCTCCAGGCTGCCGTCAAGTGGGGTGAAATTGAGTGTACAAGAACTGTTTTTCAAAATTTTATAAAACCATTGGTTCTAAAAGAATCACTTAGGAACCATACAAGAGGAAGAGTGGACACCACATCTTTCAACCGCCAACATCCAACATTGACTGATACGAAATTGTCTATTAACAGTTCGATTGAAGTCTATCAGGGACGATCATTCACTAAATCCACTTTCTGGATAGCTATTTCTTGCCATAATCTGCAAGATCACAGCACTTGGTTGAGTGAAGCTGAAAAGCAATGGTCAAATTGTCACATCGTCTATGTATGA

Coding sequence (CDS)

ATGTTCATCTCTCGGATTATCTGCTCTGGAGTGAGCTTCAGTCTGGTTTCATTTTCACTCCCATCTTCCTCAGGATGTGTGGCAGCTTATGACATAATGAATATTGAGCATATGTATATACTTTTCCTCCAGGAATCCATGAATATGATGATGCAGTTAAACGATGCCAAGCAATTCTATACCCTCAAACAATCACAGTGCATGAGAACTGTTTTTGGCTTGAAACATTATTGGCTCCAGGCTGCCGTCAAGTGGGGTGAAATTGAGTGTACAAGAACTGTTTTTCAAAATTTTATAAAACCATTGGTTCTAAAAGAATCACTTAGGAACCATACAAGAGGAAGAGTGGACACCACATCTTTCAACCGCCAACATCCAACATTGACTGATACGAAATTGTCTATTAACAGTTCGATTGAAGTCTATCAGGGACGATCATTCACTAAATCCACTTTCTGGATAGCTATTTCTTGCCATAATCTGCAAGATCACAGCACTTGGTTGAGTGAAGCTGAAAAGCAATGGTCAAATTGTCACATCGTCTATGTATGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G001610.1CmoCh07G001610.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score:

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G001610CmaCh07G001620Cucurbita maxima (Rimu)cmacmoB875
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh07G001610Wax gourdcmowgoB1074
CmoCh07G001610Wax gourdcmowgoB1077
CmoCh07G001610Cucurbita moschata (Rifu)cmocmoB190
CmoCh07G001610Cucurbita moschata (Rifu)cmocmoB459
CmoCh07G001610Cucumber (Gy14) v1cgycmoB0043
CmoCh07G001610Cucumber (Gy14) v1cgycmoB0620
CmoCh07G001610Cucurbita maxima (Rimu)cmacmoB240
CmoCh07G001610Cucurbita maxima (Rimu)cmacmoB672
CmoCh07G001610Wild cucumber (PI 183967)cmocpiB844
CmoCh07G001610Wild cucumber (PI 183967)cmocpiB873
CmoCh07G001610Watermelon (Charleston Gray)cmowcgB755
CmoCh07G001610Cucumber (Chinese Long) v2cmocuB834
CmoCh07G001610Cucumber (Chinese Long) v2cmocuB865
CmoCh07G001610Melon (DHL92) v3.5.1cmomeB771
CmoCh07G001610Melon (DHL92) v3.5.1cmomeB782
CmoCh07G001610Watermelon (Charleston Gray)cmowcgB760
CmoCh07G001610Watermelon (97103) v1cmowmB809
CmoCh07G001610Watermelon (97103) v1cmowmB816
CmoCh07G001610Cucurbita pepo (Zucchini)cmocpeB801
CmoCh07G001610Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G001610Cucurbita pepo (Zucchini)cmocpeB818
CmoCh07G001610Bottle gourd (USVL1VR-Ls)cmolsiB774
CmoCh07G001610Bottle gourd (USVL1VR-Ls)cmolsiB783
CmoCh07G001610Cucumber (Gy14) v2cgybcmoB132
CmoCh07G001610Cucumber (Gy14) v2cgybcmoB843
CmoCh07G001610Melon (DHL92) v3.6.1cmomedB875
CmoCh07G001610Melon (DHL92) v3.6.1cmomedB886
CmoCh07G001610Silver-seed gourdcarcmoB0210
CmoCh07G001610Silver-seed gourdcarcmoB0745
CmoCh07G001610Silver-seed gourdcarcmoB1083
CmoCh07G001610Silver-seed gourdcarcmoB1281
CmoCh07G001610Cucumber (Chinese Long) v3cmocucB0988
CmoCh07G001610Cucumber (Chinese Long) v3cmocucB1019
CmoCh07G001610Watermelon (97103) v2cmowmbB849
CmoCh07G001610Watermelon (97103) v2cmowmbB857