CmoCh07G001220 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G001220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Mitochondrial inner membrane signal peptidase
Location	Cmo_Chr07 : 688374 .. 690023 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGACCGATAAAACAGTCGCAGTTAACCCAGAGCCGAAGAAGCATTGGCCGGAACAGTTTTCTTAGCGAAGTTCCTTTCATGTTGCAACCACATACGTCTGCACCGCCGCTCGTCTTTGAAATCAATGTCTCAGAACGCTCATTTTTAGGGCTTAGTTGAGTTGATCTGCGTGAGCTTGCTCCCTACTCTAAACCTAACCGGCGATTTCATCTTGGCCGAACGAATCTCCACTCGTTTTGGCAGAGTCGGCGGCGGAGACATTGTCCTCGTGAGTTCCCCTGAGAACCATCGAAAAGTAATGGCGAAGCGCTTGATGGGCATGGAAGGTGATTCTGTTACCTATGTTGTAGACCCGAAGAATAATGATTGGTGTGAAACTGTTGTGGTATGGCTGATTAGAATTCTTCTTACTTGCTTCATTTTTTCTGGAGTTTAGTAAATTGTGTGTGTTTTTTAATTGTTGACCGTGTGTTCAATTAGGTTCCTAAGGGACATGTTTGGATAGAGGGAGATAATATGTATGATTCAAAGGATTCAAGATATTTTGGGGCCGTCCCATATGGTCTTCTGCAAGGGAAAGTATTCTGGAGGGTAAGTGAGATGAATGTTCTAATTCCTTTCCATCAAGAAAAATGGTTGTTGATTCAATGCTAGTATGCTTGTACATAACAAAAATCCATTACTAGTATGCAGGGATTATGTGGTTCCGTGTTCTATTTGCATTCAGAGTACAAATAGATACTGATAATGAAGTTGAAAATGTATAATGTTGTAAAATCTCATAGATGATGCCTTGAAGAATGGTCCTAAAGTAATGAATTTTAGTTTTTCTTATGGTAAAACAGCTCCCTGAATTGGTCGGGTCAGTGTAACAGCCCAAGCCCACCGCTGTTACATATGGCCGTCAGCCTTACGGTTTTAAAACGCGTTTGTTAGGGAAAGGTTTCTACACCCTTATAAGGAATGTTTCGTTCCCCTCTTCAACTGACGTGGGATCTCACGGTCACAAGTAGATCAGATATGAGCACAATTTAGGAGACTTATGTTTGGGAGACTGCGTGGAAAGTAGTTTTCTGCTTTTCAACACAGATTTTAGAAACTCTTATCAGAAGGGTGTTGTGAAAGTTGAAATTTATGCACTTAGAATACCATTTGCAAGATAATAACTTTGGGCAATACTATTTGTTATCTAGCAAATCCATGAAGACAAAGTATAAGGCATAAGCCAAAAGTAGTCCTCAAAGGGGCAAAAGACTGCCTCATTCGATATGATTTGCATGATAGATCTCTAAGAGATAGCAATAACTCATACAAATAGCTACACTCTAAGCAAGTCCTCATAGATGCAGCCTTATGTTTCAGTGATATTTCTAAATCTATTATGCATTGTTGCTTTAGATTTTCCGATTTATTATCATTATAATTGCTCTCATCGTCTTAAAATAGCTTCTGATATCTCTTTTGTGCGTAGTTGTGGCCACCTAAAAGTCTTGGACCGTTGGAGAAGAGGAAATCGAATGAGACAGTCTTGGGAGGTAAGCTCAATTGCTCTCCAACCTCAGATTCTTTGTCATTTAAGAATTATTTATTCATTTATTTATTTTCATGACATCTTCATTTCATGCTTCTTGTTGTTTAGGCTAA

mRNA sequence

ATGGCGGGACCGATAAAACAGTCGCAGTTAACCCAGAGCCGAAGAAGCATTGGCCGGAACAGTTTTCTTAGCGAAGGCTTAGTTGAGTTGATCTGCGTGAGCTTGCTCCCTACTCTAAACCTAACCGGCGATTTCATCTTGGCCGAACGAATCTCCACTCGTTTTGGCAGAGTCGGCGGCGGAGACATTGTCCTCGTGAGTTCCCCTGAGAACCATCGAAAAGTAATGGCGAAGCGCTTGATGGGCATGGAAGGTGATTCTGTTACCTATGTTGTAGACCCGAAGAATAATGATTGGTGTGAAACTGTTGTGGTTCCTAAGGGACATGTTTGGATAGAGGGAGATAATATGTATGATTCAAAGGATTCAAGATATTTTGGGGCCGTCCCATATGGTCTTCTGCAAGGGAAAGTATTCTGGAGGTTGTGGCCACCTAAAAGTCTTGGACCGTTGGAGAAGAGGAAATCGAATGAGACAGTCTTGGGAGGCTAA

Coding sequence (CDS)

ATGGCGGGACCGATAAAACAGTCGCAGTTAACCCAGAGCCGAAGAAGCATTGGCCGGAACAGTTTTCTTAGCGAAGGCTTAGTTGAGTTGATCTGCGTGAGCTTGCTCCCTACTCTAAACCTAACCGGCGATTTCATCTTGGCCGAACGAATCTCCACTCGTTTTGGCAGAGTCGGCGGCGGAGACATTGTCCTCGTGAGTTCCCCTGAGAACCATCGAAAAGTAATGGCGAAGCGCTTGATGGGCATGGAAGGTGATTCTGTTACCTATGTTGTAGACCCGAAGAATAATGATTGGTGTGAAACTGTTGTGGTTCCTAAGGGACATGTTTGGATAGAGGGAGATAATATGTATGATTCAAAGGATTCAAGATATTTTGGGGCCGTCCCATATGGTCTTCTGCAAGGGAAAGTATTCTGGAGGTTGTGGCCACCTAAAAGTCTTGGACCGTTGGAGAAGAGGAAATCGAATGAGACAGTCTTGGGAGGCTAA

Homology

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BLAST of CmoCh07G001220 vs. Swiss-Prot
Match: IMP1L_MOUSE (Mitochondrial inner membrane protease subunit 1 OS=Mus musculus GN=Immp1l PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-21
Identity = 47/124 (37.90%), Postives = 77/124 (62.10%), Query Frame = 1


Query: 26  GLVELICVSLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEG 85
           G+V     S+ PT+    D + AE +S  F  +  GDIV+  SP + +  + KR++G+EG
Sbjct: 32  GVVMCSGPSMEPTIQ-NSDIVFAENLSRHFYGIQRGDIVIAKSPSDPKSNICKRVIGLEG 91

Query: 86  DSVTYVVDPKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPP 145
           D +  +    ++ +     VP GHVW+EGDN+ +S DSRY+G +PYGL++G++F+++WP 
Sbjct: 92  DKI--LSTSPSDVFKSRSYVPTGHVWLEGDNLQNSTDSRYYGPIPYGLIRGRIFFKIWPF 151

Query: 146 KSLG 150
              G
Sbjct: 152 SDFG 152

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BLAST of CmoCh07G001220 vs. Swiss-Prot
Match: IMP1L_HUMAN (Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens GN=IMMP1L PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-20
Identity = 46/124 (37.10%), Postives = 76/124 (61.29%), Query Frame = 1


Query: 26  GLVELICVSLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEG 85
           G+V     S+ PT+    D + AE +S  F  +  GDIV+  SP + +  + KR++G+EG
Sbjct: 32  GVVMCSGPSMEPTIQ-NSDIVFAENLSRHFYGIQRGDIVIAKSPSDPKSNICKRVIGLEG 91

Query: 86  DSVTYVVDPKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPP 145
           D +  +    ++ +     VP GHVW+EGDN+ +S DSR +G +PYGL++G++F+++WP 
Sbjct: 92  DKI--LTTSPSDFFKSHSYVPMGHVWLEGDNLQNSTDSRCYGPIPYGLIRGRIFFKIWPL 151

Query: 146 KSLG 150
              G
Sbjct: 152 SDFG 152

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BLAST of CmoCh07G001220 vs. Swiss-Prot
Match: IMP1_SCHPO (Mitochondrial inner membrane protease subunit 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imp1 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.4e-20
Identity = 46/112 (41.07%), Postives = 76/112 (67.86%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGR-VGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVV 93
           S++PTLN  G+F+L +++  RF R    GD+V+ + P + ++ + KR++GM GD++   V
Sbjct: 35  SMMPTLNSGGEFVLLDKLHGRFARSCSVGDVVVSAKPSDSKQHVCKRIIGMPGDTI--YV 94

Query: 94  DPKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWP 145
           DP +++  + + +P GHVW+ GDN+  S DSR +G VP GL++ KV  R+WP
Sbjct: 95  DPTSSN--KKITIPLGHVWLAGDNIAHSLDSRNYGPVPMGLIKAKVIARVWP 142

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BLAST of CmoCh07G001220 vs. Swiss-Prot
Match: IMP1L_XENTR (Mitochondrial inner membrane protease subunit 1 OS=Xenopus tropicalis GN=immp1l PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.8e-20
Identity = 47/120 (39.17%), Postives = 74/120 (61.67%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVVD 93
           S+ PT+    D +L + +S  F  +  GDI++  SP+     + KR++G+EGD V   + 
Sbjct: 40  SMEPTIR-NYDVLLCDNLSRHFFSIHKGDIIVAKSPDKPSVNICKRVIGLEGDKVC--MS 99

Query: 94  PKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSLGPLEK 153
             +        VPKGHVW+EGDN+ +S DSR +G VPY L++G++  R+WP +S GPL++
Sbjct: 100 SPSALLKRHTYVPKGHVWLEGDNLDNSTDSRSYGPVPYALIRGRICLRVWPLESFGPLKE 156

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BLAST of CmoCh07G001220 vs. Swiss-Prot
Match: IMP2L_DANRE (Mitochondrial inner membrane protease subunit 2 OS=Danio rerio GN=immp2l PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.5e-15
Identity = 49/116 (42.24%), Postives = 66/116 (56.90%), Query Frame = 1


Query: 34  SLLPTLNLTG----DFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVT 93
           S+ P+LN  G    D +L  R S R   V  GDIV V SP+N ++ + KR++G+EGD + 
Sbjct: 42  SMQPSLNPDGESSPDVVLLNRWSVRNYHVQRGDIVSVLSPKNPQQKIIKRVIGIEGDFIK 101

Query: 94  YVVDPKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPP 146
             +  KN      V VP GH+WIEGD+   S DS  FG V  GL+ G+    +WPP
Sbjct: 102 -TLGYKNR----YVRVPDGHLWIEGDHHGHSFDSNAFGPVSLGLVHGRASHIIWPP 152

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BLAST of CmoCh07G001220 vs. TrEMBL
Match: A0A0A0KI27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G522740 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 4.6e-60
Identity = 109/128 (85.16%), Postives = 119/128 (92.97%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVVD 93
           S+LPTLNLTGDF+LAER+STRFGRVG GDIVLV SPEN RKV+ KRL+GMEGDSVTYVVD
Sbjct: 48  SMLPTLNLTGDFVLAERLSTRFGRVGVGDIVLVRSPENPRKVVGKRLIGMEGDSVTYVVD 107

Query: 94  PKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSLGPLEK 153
           PKN+DW ETVVVPKGHVWIEGDN+YDS+DSR FGAVPY LLQGK+FWR+WPPKS G LEK
Sbjct: 108 PKNSDWSETVVVPKGHVWIEGDNIYDSRDSRNFGAVPYSLLQGKIFWRIWPPKSFGQLEK 167

Query: 154 RKSNETVL 162
           RKSNETVL
Sbjct: 168 RKSNETVL 175

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BLAST of CmoCh07G001220 vs. TrEMBL
Match: A9PAC0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-45
Identity = 82/124 (66.13%), Postives = 104/124 (83.87%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVVD 93
           S+LPT N++GD  LAE+IS + G+VG GDIVLV+SP   RK++ KR++G+EGDSVTYVVD
Sbjct: 47  SMLPTFNISGDLALAEKISHKLGKVGAGDIVLVTSPVEPRKIVTKRVVGVEGDSVTYVVD 106

Query: 94  PKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSLGPLEK 153
           PKN+D  ET+VVPKGH+W+EGDN+Y SKDSR FGAV YGLLQGK+FW++WPPK  GPL  
Sbjct: 107 PKNSDRTETIVVPKGHIWVEGDNIYKSKDSRNFGAVSYGLLQGKMFWKIWPPKDFGPLGN 166

Query: 154 RKSN 158
           ++ N
Sbjct: 167 KEQN 170

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BLAST of CmoCh07G001220 vs. TrEMBL
Match: B9H5S4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s09580g PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.2e-45
Identity = 80/124 (64.52%), Postives = 104/124 (83.87%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVVD 93
           S+LPT NLTGD+ LAER S + G+VG GDIV++ SP   RK+M KR++G+EGDSVTYVV+
Sbjct: 47  SMLPTFNLTGDWALAERFSHKLGKVGAGDIVILKSPVEPRKIMTKRVIGVEGDSVTYVVE 106

Query: 94  PKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSLGPLEK 153
           PKN+D  ET+VVPKGH+W+EGDN+Y+SKDSR FGAVPYGLL+GK+ W++WPPK  G + K
Sbjct: 107 PKNSDRTETIVVPKGHIWVEGDNIYNSKDSRNFGAVPYGLLRGKMLWKIWPPKDFGYIGK 166

Query: 154 RKSN 158
           ++ N
Sbjct: 167 KEQN 170

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BLAST of CmoCh07G001220 vs. TrEMBL
Match: M5X2P2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012180mg PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.6e-44
Identity = 86/127 (67.72%), Postives = 99/127 (77.95%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVVD 93
           S+LPTL L G+  LAERISTRF ++G GDIVLV SPE   K M KRL  MEG SVTY VD
Sbjct: 53  SMLPTLGLAGNLCLAERISTRFEKLGVGDIVLVQSPEVPWKFMTKRLKAMEGQSVTYFVD 112

Query: 94  PKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSLGPLEK 153
           PKN+D  ET+VVPKGHVWIEGDN+Y+S DSR FG VPYGLLQG+VFWR+WPPK  G L +
Sbjct: 113 PKNSDKSETIVVPKGHVWIEGDNIYESNDSRKFGPVPYGLLQGRVFWRIWPPKDFGSLAQ 172

Query: 154 RKSNETV 161
            K  ++V
Sbjct: 173 NKGKDSV 179

[Close]

BLAST of CmoCh07G001220 vs. TrEMBL
Match: B9S148_RICCO (Mitochondrial inner membrane protease subunit, putative OS=Ricinus communis GN=RCOM_0633700 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.3e-43
Identity = 87/125 (69.60%), Postives = 101/125 (80.80%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVVD 93
           S+LPTLNLTGD +LAERIS RFG+VG GDIVLV SP N ++++ KR+MG+EGDSVTYVVD
Sbjct: 47  SMLPTLNLTGDLVLAERISPRFGKVGPGDIVLVRSPVNPKRIVTKRVMGVEGDSVTYVVD 106

Query: 94  PKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSLGPLEK 153
           PKN+D   TVVVPKGH+WIEGDN+YDS DSR FGAVPYGLL  KVFWR   P ++ PL K
Sbjct: 107 PKNSDASNTVVVPKGHIWIEGDNVYDSNDSRKFGAVPYGLLHAKVFWRKGDPITV-PLTK 166

Query: 154 RKSNE 159
               E
Sbjct: 167 ENGFE 170

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BLAST of CmoCh07G001220 vs. TAIR10
Match: AT1G53530.1 (AT1G53530.1 Peptidase S24/S26A/S26B/S26C family protein)

HSP 1 Score: 155.2 bits (391), Expect = 3.4e-38
Identity = 67/118 (56.78%), Postives = 91/118 (77.12%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVVD 93
           S+LPTLNLTGD ILAE +S RFG++G GD+VLV SP + ++++ KR++G+EGD +T+  D
Sbjct: 50  SMLPTLNLTGDVILAEHLSHRFGKIGLGDVVLVRSPRDPKRMVTKRILGLEGDRLTFSAD 109

Query: 94  PKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSLGPL 152
           P   D   +V+VPKGHVWI+GDN+Y S DSR+FG VPY L++GK   R+WPP+  G L
Sbjct: 110 PLVGDASVSVLVPKGHVWIQGDNLYASTDSRHFGPVPYSLIEGKALLRVWPPEYFGSL 167

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BLAST of CmoCh07G001220 vs. TAIR10
Match: AT1G29960.1 (AT1G29960.1 Peptidase S24/S26A/S26B/S26C family protein)

HSP 1 Score: 145.6 bits (366), Expect = 2.7e-35
Identity = 61/118 (51.69%), Postives = 91/118 (77.12%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVVD 93
           S+ PTL+ +G+ +LAERIS R+ +   GDIV++ SPEN  K   KR++G+EGD +++V+D
Sbjct: 47  SMTPTLHPSGNVLLAERISKRYQKPSRGDIVVIRSPENPNKTPIKRVIGIEGDCISFVID 106

Query: 94  PKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSLGPL 152
            + +D  +T+VVPKGHV+++GD  ++S+DSR FG VPYGL+QG+V WR+WP +  GPL
Sbjct: 107 SRKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGTVPYGLIQGRVLWRVWPFQDFGPL 164

[Close]

BLAST of CmoCh07G001220 vs. TAIR10
Match: AT1G23465.1 (AT1G23465.1 Peptidase S24/S26A/S26B/S26C family protein)

HSP 1 Score: 135.6 bits (340), Expect = 2.8e-32
Identity = 57/109 (52.29%), Postives = 86/109 (78.90%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVVD 93
           S++PTL+ +G+ +LAERIS R+ +   GDIV++ SPEN  K   KR++G+EGD +++V+D
Sbjct: 47  SMIPTLHPSGNMLLAERISKRYQKPSRGDIVVIRSPENPNKTPIKRVVGVEGDCISFVID 106

Query: 94  PKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRL 143
           P  +D  +T+VVPKGHV+++GD  ++S+DSR FG VPYGL+QG+V WR+
Sbjct: 107 PVKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGPVPYGLIQGRVLWRV 155

[Close]

BLAST of CmoCh07G001220 vs. TAIR10
Match: AT3G08980.1 (AT3G08980.1 Peptidase S24/S26A/S26B/S26C family protein)

HSP 1 Score: 85.1 bits (209), Expect = 4.3e-17
Identity = 42/123 (34.15%), Postives = 67/123 (54.47%), Query Frame = 1


Query: 34  SLLPTLN-----LTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSV 93
           S+ PT N        D++L ++   +  +   GD+V+ SSP +      KR++GM G+ +
Sbjct: 38  SMSPTFNPQRNSYLDDYVLVDKFCLKDYKFARGDVVVFSSPTHFGDRYIKRIVGMPGEWI 97

Query: 94  TYVVDPKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSL 152
           +   D         + VP+GH W+EGDN   S DSR FG +P GL+QG+V   +WPP+ +
Sbjct: 98  SSSRD--------VIRVPEGHCWVEGDNKTSSLDSRSFGPIPLGLIQGRVTRVMWPPQRI 152

[Close]

BLAST of CmoCh07G001220 vs. TAIR10
Match: AT1G06870.1 (AT1G06870.1 Peptidase S24/S26A/S26B/S26C family protein)

HSP 1 Score: 64.7 bits (156), Expect = 6.0e-11
Identity = 42/141 (29.79%), Postives = 72/141 (51.06%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPE-------NHRKVMAKRLMGMEGD 93
           S+LPTL++ GD ++AE++S  F +    DIV+  +P        +   V  KR++  EGD
Sbjct: 214 SMLPTLDV-GDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGD 273

Query: 94  SV----------------TYVVDPKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVP 152
            V                 +V++P + +  E + VP+G+V++ GDN   S DS  +G +P
Sbjct: 274 WVEVCDGKLLVNDTVQAEDFVLEPIDYE-MEPMFVPEGYVFVLGDNRNKSFDSHNWGPLP 333

[Close]

BLAST of CmoCh07G001220 vs. NCBI nr
Match: gi|659078298|ref|XP_008439652.1| (PREDICTED: mitochondrial inner membrane protease subunit 1-like [Cucumis melo])

HSP 1 Score: 240.0 bits (611), Expect = 3.0e-60
Identity = 109/128 (85.16%), Postives = 120/128 (93.75%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVVD 93
           S+LPTLNLTGDF+LAER+STRFGRVG GDIVLV SPEN RKV+ KRL+GMEGDSVTYVVD
Sbjct: 48  SMLPTLNLTGDFVLAERLSTRFGRVGVGDIVLVRSPENPRKVVGKRLIGMEGDSVTYVVD 107

Query: 94  PKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSLGPLEK 153
           PKN+DW ETVVVPKGHVWIEGDN+YDS+DSR FGAVPYGLLQGK+FWR+WPPK+ G LEK
Sbjct: 108 PKNSDWSETVVVPKGHVWIEGDNIYDSRDSRNFGAVPYGLLQGKIFWRIWPPKNFGQLEK 167

Query: 154 RKSNETVL 162
           RKSNETVL
Sbjct: 168 RKSNETVL 175

[Close]

BLAST of CmoCh07G001220 vs. NCBI nr
Match: gi|449433706|ref|XP_004134638.1| (PREDICTED: mitochondrial inner membrane protease subunit 1 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 6.6e-60
Identity = 109/128 (85.16%), Postives = 119/128 (92.97%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVVD 93
           S+LPTLNLTGDF+LAER+STRFGRVG GDIVLV SPEN RKV+ KRL+GMEGDSVTYVVD
Sbjct: 48  SMLPTLNLTGDFVLAERLSTRFGRVGVGDIVLVRSPENPRKVVGKRLIGMEGDSVTYVVD 107

Query: 94  PKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSLGPLEK 153
           PKN+DW ETVVVPKGHVWIEGDN+YDS+DSR FGAVPY LLQGK+FWR+WPPKS G LEK
Sbjct: 108 PKNSDWSETVVVPKGHVWIEGDNIYDSRDSRNFGAVPYSLLQGKIFWRIWPPKSFGQLEK 167

Query: 154 RKSNETVL 162
           RKSNETVL
Sbjct: 168 RKSNETVL 175

[Close]

BLAST of CmoCh07G001220 vs. NCBI nr
Match: gi|1009106914|ref|XP_015876933.1| (PREDICTED: mitochondrial inner membrane protease subunit 1-like [Ziziphus jujuba])

HSP 1 Score: 202.2 bits (513), Expect = 6.9e-49
Identity = 91/127 (71.65%), Postives = 108/127 (85.04%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVVD 93
           S+LPTL+LTGD +LAERISTRFG V  GDIVLV SP+   KV+ KRL+GMEGDSVTY+VD
Sbjct: 60  SMLPTLSLTGDLLLAERISTRFGMVRRGDIVLVRSPKVPTKVVTKRLIGMEGDSVTYIVD 119

Query: 94  PKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSLGPLEK 153
           P+N+D CET+VVPKGHVW+EGDN+Y S DSR FG VPYGLLQGKVFWR+WPPK  GPLE+
Sbjct: 120 PENSDRCETIVVPKGHVWVEGDNIYVSNDSRKFGPVPYGLLQGKVFWRIWPPKVFGPLEQ 179

Query: 154 RKSNETV 161
           +K  + +
Sbjct: 180 KKVKDAM 186

[Close]

BLAST of CmoCh07G001220 vs. NCBI nr
Match: gi|1000965386|ref|XP_015574965.1| (PREDICTED: mitochondrial inner membrane protease subunit 1 [Ricinus communis])

HSP 1 Score: 197.2 bits (500), Expect = 2.2e-47
Identity = 89/121 (73.55%), Postives = 103/121 (85.12%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVVD 93
           S+LPTLNLTGD +LAERIS RFG+VG GDIVLV SP N ++++ KR+MG+EGDSVTYVVD
Sbjct: 47  SMLPTLNLTGDLVLAERISPRFGKVGPGDIVLVRSPVNPKRIVTKRVMGVEGDSVTYVVD 106

Query: 94  PKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSLGPLEK 153
           PKN+D   TVVVPKGH+WIEGDN+YDS DSR FGAVPYGLL  KVFWR+WP K  GPL +
Sbjct: 107 PKNSDASNTVVVPKGHIWIEGDNVYDSNDSRKFGAVPYGLLHAKVFWRVWPRKDFGPLGQ 166

Query: 154 R 155
           R
Sbjct: 167 R 167

[Close]

BLAST of CmoCh07G001220 vs. NCBI nr
Match: gi|720078359|ref|XP_010241323.1| (PREDICTED: mitochondrial inner membrane protease subunit 1 [Nelumbo nucifera])

HSP 1 Score: 194.9 bits (494), Expect = 1.1e-46
Identity = 87/122 (71.31%), Postives = 105/122 (86.07%), Query Frame = 1


Query: 34  SLLPTLNLTGDFILAERISTRFGRVGGGDIVLVSSPENHRKVMAKRLMGMEGDSVTYVVD 93
           S+LPTLNLTGD +L ERISTR G+VG GDIVLV SPEN RK + KR+MGME D VT++VD
Sbjct: 43  SMLPTLNLTGDLLLTERISTRLGKVGPGDIVLVRSPENPRKTVTKRVMGMESDRVTFLVD 102

Query: 94  PKNNDWCETVVVPKGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSLGPLEK 153
           PKN+D C+TVVVPKGHVWI+GDN+Y S DSR+FGAVPYGL+QGKVF+R+WPP+  G L +
Sbjct: 103 PKNSDRCQTVVVPKGHVWIQGDNIYASNDSRHFGAVPYGLIQGKVFFRIWPPEGFGSLGQ 162

Query: 154 RK 156
           R+
Sbjct: 163 RE 164

The following BLAST results are available for this feature:

BLAST of CmoCh07G001220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IMP1L_MOUSE	1.6e-21	37.90	Mitochondrial inner membrane protease subunit 1 OS=Mus musculus GN=Immp1l PE=1 S...	[more]
IMP1L_HUMAN	1.0e-20	37.10	Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens GN=IMMP1L PE=2 S...	[more]
IMP1_SCHPO	1.4e-20	41.07	Mitochondrial inner membrane protease subunit 1 OS=Schizosaccharomyces pombe (st...	[more]
IMP1L_XENTR	8.8e-20	39.17	Mitochondrial inner membrane protease subunit 1 OS=Xenopus tropicalis GN=immp1l ...	[more]
IMP2L_DANRE	8.5e-15	42.24	Mitochondrial inner membrane protease subunit 2 OS=Danio rerio GN=immp2l PE=2 SV...	[more]

BLAST of CmoCh07G001220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI27_CUCSA	4.6e-60	85.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G522740 PE=4 SV=1	[more]
A9PAC0_POPTR	1.1e-45	66.13	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
B9H5S4_POPTR	7.2e-45	64.52	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s09580g PE=4 SV=1	[more]
M5X2P2_PRUPE	3.6e-44	67.72	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012180mg PE=4 SV=1	[more]
B9S148_RICCO	2.3e-43	69.60	Mitochondrial inner membrane protease subunit, putative OS=Ricinus communis GN=R...	[more]

BLAST of CmoCh07G001220 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53530.1	3.4e-38	56.78	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G29960.1	2.7e-35	51.69	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G23465.1	2.8e-32	52.29	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT3G08980.1	4.3e-17	34.15	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G06870.1	6.0e-11	29.79	Peptidase S24/S26A/S26B/S26C family protein	[more]

BLAST of CmoCh07G001220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659078298\|ref\|XP_008439652.1\|	3.0e-60	85.16	PREDICTED: mitochondrial inner membrane protease subunit 1-like [Cucumis melo]	[more]
gi\|449433706\|ref\|XP_004134638.1\|	6.6e-60	85.16	PREDICTED: mitochondrial inner membrane protease subunit 1 [Cucumis sativus]	[more]
gi\|1009106914\|ref\|XP_015876933.1\|	6.9e-49	71.65	PREDICTED: mitochondrial inner membrane protease subunit 1-like [Ziziphus jujuba...	[more]
gi\|1000965386\|ref\|XP_015574965.1\|	2.2e-47	73.55	PREDICTED: mitochondrial inner membrane protease subunit 1 [Ricinus communis]	[more]
gi\|720078359\|ref\|XP_010241323.1\|	1.1e-46	71.31	PREDICTED: mitochondrial inner membrane protease subunit 1 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000223	Pept_S26A_signal_pept_1
IPR015927	Peptidase_S24_S26A/B/C
IPR019533	Peptidase_S26
IPR019758	Pept_S26A_signal_pept_1_CS
IPR019759	Peptidase S24/S26A/S26B

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0008236	serine-type peptidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006627	protein processing involved in protein targeting to mitochondrion
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0016020	membrane
molecular_function	GO:0008236	serine-type peptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G001220.1	CmoCh07G001220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000223	Peptidase S26A, signal peptidase I	PRINTS	PR00727	LEADERPTASE	coord: 105..124 score: 2.1E-8coord: 76..88 score: 2.
IPR000223	Peptidase S26A, signal peptidase I	PANTHER	PTHR12383	PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED	coord: 34..149 score: 1.2
IPR015927	Peptidase S24/S26A/S26B/S26C	unknown	SSF51306	LexA/Signal peptidase	coord: 34..151 score: 1.36
IPR019533	Peptidase S26	PFAM	PF10502	Peptidase_S26	coord: 99..136 score: 4.
IPR019758	Peptidase S26A, signal peptidase I, conserved site	PROSITE	PS00761	SPASE_I_3	coord: 110..123 scor
IPR019759	Peptidase S24/S26A/S26B	PFAM	PF00717	Peptidase_S24	coord: 36..97 score: 8.
None	No IPR available	PANTHER	PTHR12383:SF23	SUBFAMILY NOT NAMED	coord: 34..149 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G001220	Cucumber (Gy14) v2	cgybcmoB132
CmoCh07G001220	Cucumber (Gy14) v2	cgybcmoB843
CmoCh07G001220	Melon (DHL92) v3.6.1	cmomedB875
CmoCh07G001220	Melon (DHL92) v3.6.1	cmomedB886
CmoCh07G001220	Silver-seed gourd	carcmoB0210
CmoCh07G001220	Silver-seed gourd	carcmoB0745
CmoCh07G001220	Silver-seed gourd	carcmoB1083
CmoCh07G001220	Cucumber (Chinese Long) v3	cmocucB0988
CmoCh07G001220	Cucumber (Chinese Long) v3	cmocucB1019
CmoCh07G001220	Watermelon (97103) v2	cmowmbB849
CmoCh07G001220	Watermelon (97103) v2	cmowmbB857
CmoCh07G001220	Wax gourd	cmowgoB1062
CmoCh07G001220	Wax gourd	cmowgoB1074
CmoCh07G001220	Cucurbita moschata (Rifu)	cmocmoB190
CmoCh07G001220	Cucurbita moschata (Rifu)	cmocmoB350
CmoCh07G001220	Cucurbita moschata (Rifu)	cmocmoB459
CmoCh07G001220	Cucumber (Gy14) v1	cgycmoB0043
CmoCh07G001220	Cucumber (Gy14) v1	cgycmoB0620
CmoCh07G001220	Cucurbita maxima (Rimu)	cmacmoB240
CmoCh07G001220	Cucurbita maxima (Rimu)	cmacmoB429
CmoCh07G001220	Cucurbita maxima (Rimu)	cmacmoB672
CmoCh07G001220	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G001220	Wild cucumber (PI 183967)	cmocpiB844
CmoCh07G001220	Wild cucumber (PI 183967)	cmocpiB873
CmoCh07G001220	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G001220	Cucumber (Chinese Long) v2	cmocuB834
CmoCh07G001220	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G001220	Melon (DHL92) v3.5.1	cmomeB771
CmoCh07G001220	Melon (DHL92) v3.5.1	cmomeB782
CmoCh07G001220	Watermelon (Charleston Gray)	cmowcgB760
CmoCh07G001220	Watermelon (97103) v1	cmowmB809
CmoCh07G001220	Watermelon (97103) v1	cmowmB816
CmoCh07G001220	Cucurbita pepo (Zucchini)	cmocpeB798
CmoCh07G001220	Cucurbita pepo (Zucchini)	cmocpeB801
CmoCh07G001220	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G001220	Cucurbita pepo (Zucchini)	cmocpeB818
CmoCh07G001220	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G001220	Bottle gourd (USVL1VR-Ls)	cmolsiB783