CmoCh06G017230 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G017230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr06 : 11840932 .. 11842215 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGAGGGGCAGAGATCTCATAGCCTGCGCATGGACCCATTGGTAAAACGAAAGGATTCTTGATCCAAGAAGATGAGGTTTAGTATAAAAGAAAGGCAAGATTAAGGCGCAGAATTGGTTAAGAGATTAGGAAATTGATCAAACCCCATACCCCACAACTAGCATTCGCCATGTTCATGTTCAATCTTGACAATATCCATGAGTTTGTGGAGGCCGCCTCCGTGATATCCACCCAGGCTCCAACAGGCGTTCTCAAATTCTCACCGCAAATGTTCTCCATAATGGCCACCGCCCTTCCACCTTCCCCTCGCTCCGCTCTGGCGCTCCAAATCCGCCCTCAATTCTTCCGCTCATATACCTGCACCTCTCAACTTGAATACGCAGGGATTTTCTTGAACGATTTGCAATTCACTCTATATGAAATGGATTGCAATGGTTTTCCTGAATTGCTCTTCTCTTCTACAGAGCCAGATTGCGCGCACCTTACATTCCGTCCTCCAGCTTCAATTTGTTAGTACAATACAGTGTACCTTTTCTTGAGCCTTTGTTTCTTGGATTAATGACGCCTATACTTTCAAATTCTTGCTTTTAGACAATTGTCGGCTATATAAGTTGCCACTCTGTCCTGGGACTGGGGAGATGGACATGGACCTAGAATTTGACTGCACAACCTTTGTTTCCATTCCCTCCGACTTCTTCAACGTTGTTTTGAACGTGTTCATGGATTGTTTTGACTATGGTAATCTACCATAACTCATATCTCAACTCCAAAAGCCAAATGGTTTAAGTTGTTGTGGTCTCTGTGGCAGTGTTGGTTACTGTTACGGCCTCATTGGCGCGCTTCTGCAATGATGCAGGGGACATAGTTCTTATCGCTCAGGTGATGATTATATATTATGAACTGTGTTTTCTGGAATGATAGTATAATATTTTATTTGAATTGATTATTGCAGGAAAACCAATGCAGTATTGGAGGCGTTTCATCAGAACATCAAATTCAGTTTCAGATCAGTCTTAGTCCCTGGGCGTCTTTCCGTGAATTGGCACGTCGAGTGGAGAGGGTTTGGATATACAAGCCCAATACTTCTTCCTTTGGTATAATAGCTGCACCTGTTGGACTGTATTCTCGATTTTTGGCTTATGTTCCTGCTTAATCAATATGACAAAGCTATTCATGCTGTTTCCCATCCAAACGTCTTCTCTTTTACCACATCGTCCAATCCTTTCTCGCTGCGATATACAAGTTTTTTTATTCTTTACGCTTAATCTGTTAGGAATTACGGA

mRNA sequence

CGGGAGGGGCAGAGATCTCATAGCCTGCGCATGGACCCATTGGTAAAACGAAAGGATTCTTGATCCAAGAAGATGAGGTTTAGTATAAAAGAAAGGCAAGATTAAGGCGCAGAATTGGTTAAGAGATTAGGAAATTGATCAAACCCCATACCCCACAACTAGCATTCGCCATGTTCATGTTCAATCTTGACAATATCCATGAGTTTGTGGAGGCCGCCTCCGTGATATCCACCCAGGCTCCAACAGGCGTTCTCAAATTCTCACCGCAAATGTTCTCCATAATGGCCACCGCCCTTCCACCTTCCCCTCGCTCCGCTCTGGCGCTCCAAATCCGCCCTCAATTCTTCCGCTCATATACCTGCACCTCTCAACTTGAATACGCAGGGATTTTCTTGAACGATTTGCAATTCACTCTATATGAAATGGATTGCAATGGTTTTCCTGAATTGCTCTTCTCTTCTACAGAGCCAGATTGCGCGCACCTTACATTCCGTCCTCCAGCTTCAATTTACAATTGTCGGCTATATAAGTTGCCACTCTGTCCTGGGACTGGGGAGATGGACATGGACCTAGAATTTGACTGCACAACCTTTGTTTCCATTCCCTCCGACTTCTTCAACGTTGTTTTGAACGTGTTCATGGATTGTTTTGACTATGTGTTGGTTACTGTTACGGCCTCATTGGCGCGCTTCTGCAATGATGCAGGGGACATAGTTCTTATCGCTCAGGAAAACCAATGCAGTATTGGAGGCGTTTCATCAGAACATCAAATTCAGTTTCAGATCAGTCTTAGTCCCTGGGCGTCTTTCCGTGAATTGGCACGTCGAGTGGAGAGGGTTTGGATATACAAGCCCAATACTTCTTCCTTTGGTATAATAGCTGCACCTGTTGGACTGTATTCTCGATTTTTGGCTTATGTTCCTGCTTAATCAATATGACAAAGCTATTCATGCTGTTTCCCATCCAAACGTCTTCTCTTTTACCACATCGTCCAATCCTTTCTCGCTGCGATATACAAGTTTTTTTATTCTTTACGCTTAATCTGTTAGGAATTACGGA

Coding sequence (CDS)

ATGTTCATGTTCAATCTTGACAATATCCATGAGTTTGTGGAGGCCGCCTCCGTGATATCCACCCAGGCTCCAACAGGCGTTCTCAAATTCTCACCGCAAATGTTCTCCATAATGGCCACCGCCCTTCCACCTTCCCCTCGCTCCGCTCTGGCGCTCCAAATCCGCCCTCAATTCTTCCGCTCATATACCTGCACCTCTCAACTTGAATACGCAGGGATTTTCTTGAACGATTTGCAATTCACTCTATATGAAATGGATTGCAATGGTTTTCCTGAATTGCTCTTCTCTTCTACAGAGCCAGATTGCGCGCACCTTACATTCCGTCCTCCAGCTTCAATTTACAATTGTCGGCTATATAAGTTGCCACTCTGTCCTGGGACTGGGGAGATGGACATGGACCTAGAATTTGACTGCACAACCTTTGTTTCCATTCCCTCCGACTTCTTCAACGTTGTTTTGAACGTGTTCATGGATTGTTTTGACTATGTGTTGGTTACTGTTACGGCCTCATTGGCGCGCTTCTGCAATGATGCAGGGGACATAGTTCTTATCGCTCAGGAAAACCAATGCAGTATTGGAGGCGTTTCATCAGAACATCAAATTCAGTTTCAGATCAGTCTTAGTCCCTGGGCGTCTTTCCGTGAATTGGCACGTCGAGTGGAGAGGGTTTGGATATACAAGCCCAATACTTCTTCCTTTGGTATAATAGCTGCACCTGTTGGACTGTATTCTCGATTTTTGGCTTATGTTCCTGCTTAA

Homology

[Close]

BLAST of CmoCh06G017230 vs. TrEMBL
Match: A0A0A0LIF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.1e-19
Identity = 74/251 (29.48%), Postives = 129/251 (51.39%), Query Frame = 1


Query: 2   FMFNLDNIHEFVEAASVISTQAPTGVLKFSPQMFSIMATALPPSPRSALALQIRPQFFRS 61
           F F ++N+   V+A + +      G   FSP+MF +MA +   S  SA+ LQ+ P FF  
Sbjct: 4   FNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADS-NVSIHSAIGLQLWPPFFDH 63

Query: 62  YTCTSQLEYAGIFLNDLQFTLYEMDCNGFPELLFS-STEPDCAHLTFRPPASIYNCRLYK 121
           Y C   L+ +  F +++      +   G+    FS   +P  A + F+ P  +      +
Sbjct: 64  YFCRD-LKNSWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPHHAQIEFQGPTRLLLEVTLR 123

Query: 122 LPLCPGTGEMDMDL-EFDCTTFVSIPSDFFNVVLNVFMDCFDYVLVTVTASLARFC-NDA 181
           L  C     + + + +FD + FVS+ S  F+ +++ +   FD V VT+T+    F  +  
Sbjct: 124 LVFC----HLPLRIHQFDLSVFVSMDSQQFSNLISQY-HMFDDVHVTITSERVIFSYSTM 183

Query: 182 GDIVLIAQENQCSIGGVSSEHQIQFQISLSPWASFRELARRVERVWIYKPNTSSFGIIAA 241
            + +L  Q  QC IGG+ +  +++F I+L P   F  +A + +RVW +K   S+ G+I A
Sbjct: 184 QETILSPQNGQCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITA 243

Query: 242 PVGLYSRFLAY 250
           P+GL +R +A+
Sbjct: 244 PLGLNARLVAF 247

[Close]

BLAST of CmoCh06G017230 vs. TrEMBL
Match: A0A0A0KA18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006750 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.5e-14
Identity = 67/226 (29.65%), Postives = 115/226 (50.88%), Query Frame = 1


Query: 30  FSPQMFSIMATALPPSPRSALALQIRPQFFRSYTCTSQLEYAGIFLNDLQFTLYEMDCNG 89
           FSP MF I+A +   S +SA  LQ+ P FF S+   +  +     L  L     E+  +G
Sbjct: 32  FSPDMFCILADS-DVSLQSAFGLQLWPPFFDSFYSDNLRQIFWFRLTHLFPLALELLESG 91

Query: 90  FPELLFSSTE--PDCAHLTFRPPASIY---NCRLYKLPLCPGTGEMDMDLEFDCTTFVSI 149
              L FS      + A   F  P  +    N RL  +      G++D+      + FV++
Sbjct: 92  CTSLTFSIERFRHNYAQFKFEGPNGLLREVNFRLTPIVRPLRIGQIDL------SAFVTM 151

Query: 150 PSDFFNVVLNVFMDCFDYVLVTVTASLARFCNDA-GDIVLIAQENQCSIGGVSSEHQIQF 209
            S  F+ +++ + + FDYV V +T+    F +    +  + A++ +C +GGV +  Q+QF
Sbjct: 152 DSQEFSYIISQY-NMFDYVEVIITSRRVSFSSSTIQETTISAEDGRCIVGGVRAPVQVQF 211

Query: 210 QISLSPWASFRELARRVERVWIYKPNTSSFGIIAAPVGLYSRFLAY 250
            I++S   +F   A + +R+W++K   S+ GII AP+GLY R +++
Sbjct: 212 IITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPLGLYGRLVSF 249

[Close]

BLAST of CmoCh06G017230 vs. TrEMBL
Match: A0A0A0KFM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.5e-14
Identity = 67/223 (30.04%), Postives = 111/223 (49.78%), Query Frame = 1


Query: 30  FSPQMFSIMATALPPSPRSALALQIRPQFFRSYTCTSQLEYAGIFLNDLQFTLYEMDCNG 89
           FSP  F IMA +   S  SA  +Q+ P FF S+      +     L  L     E+  +G
Sbjct: 32  FSPDTFCIMADS-DASIHSAFGVQLWPPFFDSFYSDDIRQLFWFRLTHLFTLAVELLESG 91

Query: 90  FPELLFSSTE--PDCAHLTFRPPASIYNCRLYKLPLCPGTGEMDMDLEFDCTTFVSIPSD 149
           +  L FS      + A   F  P  +   R     L P    + +  + D + FVS+ S+
Sbjct: 92  YTSLTFSIERFRYNYAQFKFEGPNGLL--RDVNFLLTPVVRPLRIG-QIDLSAFVSMDSE 151

Query: 150 FFNVVLNVFMDCFDYVLVTVTASLARFCNDA-GDIVLIAQENQCSIGGVSSEHQIQFQIS 209
            F+ +++ +   FDYV V +T+    F      + ++  ++ QC IGGV + +Q+QF I+
Sbjct: 152 EFSNIISEY-HMFDYVEVIITSRRVSFSYAIIQETIITPEDGQCLIGGVRAPNQVQFIIT 211

Query: 210 LSPWASFRELARRVERVWIYKPNTSSFGIIAAPVGLYSRFLAY 250
           +S   +F   A + +R+W++K   S+ GII AP+GLY R +++
Sbjct: 212 MSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPLGLYGRLVSF 249

[Close]

BLAST of CmoCh06G017230 vs. TrEMBL
Match: A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.2e-12
Identity = 70/254 (27.56%), Postives = 110/254 (43.31%), Query Frame = 1


Query: 1   MFMFNLDNIHEFVEAASVISTQAPTGVLKFSPQMFSIMATALPPSPRSALALQIRPQFFR 60
           M  F ++ +   +    V+S       ++ SP   S+M     PS      LQ+  +FF 
Sbjct: 3   MLKFRVNPLSGLLNPTPVLSHLGEEVDIRVSPLKLSLMLPNFSPS--FIAGLQMTHEFFN 62

Query: 61  SYTCTSQLEYAGIFLNDLQFTLYEMDCNGFPELLFSSTEPDC--AHLTFRPPASIYNCRL 120
            Y      ++    L      +Y M+  GF  +LF+         +LTF    +    R 
Sbjct: 63  LYISDRTYQFR-FSLRKFYTFMYRMELQGFSSMLFTVDMKRLLSVYLTFENNNAKRERRR 122

Query: 121 YKLPLCPGTGEMDMDLEFDCTTFVSIPSDFFNVVLNVFMDCFDYVLVTVTASLARFCNDA 180
            KL       ++D+D + + TTFVSI S  F  + +        V VT T S   F N  
Sbjct: 123 LKLLAY----DLDLDGDIEYTTFVSIDSRDFRRIASELNS--RSVSVTFTNSRVNFFNKN 182

Query: 181 GDIVLIAQENQCSIGGVSSEHQIQFQISLSPWASFRELARRVERVWIYKPNTSSFGIIAA 240
            +I    +ENQC IGGV    + +F I++ P   F +L+ + +RVW       S  I+  
Sbjct: 183 KEITFSKEENQCVIGGVEEGEEFRFIITVHPLVFFLDLSSQSKRVWFLMQRDFSC-IMIL 242

Query: 241 PVGLYSRFLAYVPA 253
           P+GL+ +F  Y P+
Sbjct: 243 PLGLWQQFWVYFPS 246

[Close]

BLAST of CmoCh06G017230 vs. TrEMBL
Match: A0A0A0K833_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002320 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.5e-12
Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = 1


Query: 1   MFMFNLDNIHEFVEAASVISTQAPTGVLKFSPQMFSIMATALPPSPRSALALQIRPQFFR 60
           MF+F LD IH FV+A S ++       LKFSP+MFSIMA    PSP   +ALQ+ P FF 
Sbjct: 1   MFVFILDEIHSFVDAVSALAGLGYVFNLKFSPEMFSIMANP-TPSPSCTIALQLFPPFFN 60

Query: 61  SYTCTSQLEYAGIFLNDLQFTLYEMDCNGFPELLFSSTEPDCAHLTF 108
                 QL Y+ I++N     ++ ++  GF  L FS  +   A LTF
Sbjct: 61  QQYSCQQLHYSWIYINHFFPEMFHLERTGFSSLTFSFADSHHADLTF 106

[Close]

BLAST of CmoCh06G017230 vs. NCBI nr
Match: gi|659119586|ref|XP_008459734.1| (PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo])

HSP 1 Score: 115.9 bits (289), Expect = 1.0e-22
Identity = 76/249 (30.52%), Postives = 130/249 (52.21%), Query Frame = 1


Query: 2   FMFNLDNIHEFVEAASVISTQAPTGVLKFSPQMFSIMATALPPSPRSALALQIRPQFFRS 61
           F F ++N+   ++A + +          FSP+MF +M  +   S  S + LQ+ P FF  
Sbjct: 3   FNFVVNNMQTLIDALATLGVADQLADATFSPEMFCVMVDS-NVSIHSTIGLQLWPPFFDH 62

Query: 62  YTCTSQLEYAGIFLNDLQFTLYEMDCNGFPELLFS-STEPDCAHLTFRPPASIYNCRLYK 121
           Y C S+L+Y+  F N++     ++  +G+    FS    PD A + F+ P  + +   ++
Sbjct: 63  YFC-SELQYSWFFFNEIFPLAQDLQDSGYTSFSFSIGPNPDLAQIKFQGPNGLLHETNFE 122

Query: 122 LPLCPGTGEMDMDLEFDCTTFVSIPSDFFNVVLNVFMDCFDYVLVTVTASLARFCNDAGD 181
           L        +    +FD + FVS+ S  F+ V++ +   FD V VT+T+    F      
Sbjct: 123 LVYSHHPLRIP---DFDLSVFVSMDSQEFSNVISQY-HMFDDVHVTITSERVIFSYSIMQ 182

Query: 182 IVLIAQEN-QCSIGGVSSEHQIQFQISLSPWASFRELARRVERVWIYKPNTSSFGIIAAP 241
             ++ Q+N QC IGG+ + +Q+QF ++L P   F  +A + +RVW +K   S+ G+I AP
Sbjct: 183 ETILNQQNGQCIIGGIKAPNQVQFILTLGPSEVFNHIASQTKRVWFFKQCNSNKGLITAP 242

Query: 242 VGLYSRFLA 249
           +GL SR +A
Sbjct: 243 LGLNSRLVA 245

[Close]

BLAST of CmoCh06G017230 vs. NCBI nr
Match: gi|778686233|ref|XP_004146827.2| (PREDICTED: uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 8.8e-19
Identity = 74/251 (29.48%), Postives = 129/251 (51.39%), Query Frame = 1


Query: 2   FMFNLDNIHEFVEAASVISTQAPTGVLKFSPQMFSIMATALPPSPRSALALQIRPQFFRS 61
           F F ++N+   V+A + +      G   FSP+MF +MA +   S  SA+ LQ+ P FF  
Sbjct: 4   FNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADS-NVSIHSAIGLQLWPPFFDH 63

Query: 62  YTCTSQLEYAGIFLNDLQFTLYEMDCNGFPELLFS-STEPDCAHLTFRPPASIYNCRLYK 121
           Y C   L+ +  F +++      +   G+    FS   +P  A + F+ P  +      +
Sbjct: 64  YFCRD-LKNSWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPHHAQIEFQGPTRLLLEVTLR 123

Query: 122 LPLCPGTGEMDMDL-EFDCTTFVSIPSDFFNVVLNVFMDCFDYVLVTVTASLARFC-NDA 181
           L  C     + + + +FD + FVS+ S  F+ +++ +   FD V VT+T+    F  +  
Sbjct: 124 LVFC----HLPLRIHQFDLSVFVSMDSQQFSNLISQY-HMFDDVHVTITSERVIFSYSTM 183

Query: 182 GDIVLIAQENQCSIGGVSSEHQIQFQISLSPWASFRELARRVERVWIYKPNTSSFGIIAA 241
            + +L  Q  QC IGG+ +  +++F I+L P   F  +A + +RVW +K   S+ G+I A
Sbjct: 184 QETILSPQNGQCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITA 243

Query: 242 PVGLYSRFLAY 250
           P+GL +R +A+
Sbjct: 244 PLGLNARLVAF 247

[Close]

BLAST of CmoCh06G017230 vs. NCBI nr
Match: gi|659117581|ref|XP_008458677.1| (PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo])

HSP 1 Score: 101.3 bits (251), Expect = 2.6e-18
Identity = 82/256 (32.03%), Postives = 123/256 (48.05%), Query Frame = 1


Query: 6   LDNIHEFVEAASVISTQAPTGVLKFSPQMFSIMATALPPSPRSALALQIRPQFFRSYTCT 65
           L+NIH F +A   +     T  LK SP+MFS++ +     P    +LQI P FF ++ C 
Sbjct: 5   LENIHSFSKALLPLQRFNDTADLKCSPKMFSLIISR--HFPLIITSLQILPPFFTNFLCQ 64

Query: 66  SQLEYAGIFLNDLQFTLYEMDCNGFPELLFSSTEPDC--------AHLTFRPPASI--YN 125
           +Q     IF   +    +    N     L+SS               L FR P  +    
Sbjct: 65  NQ-----IFQFQIPIKSFYDIMNSMTHRLYSSMTLSLHPQQPLIQIALQFRNPRVVDDQE 124

Query: 126 CRLYKLPLCPGTGEMDMDLEFDCTTFVSIPSDFFNVVLNVFMDCFDYVLVTVTASLARFC 185
              +  PL P   E D+  E D   F SI S  F  +  + +D FD  LVT+T S  +F 
Sbjct: 125 ALYHAFPLSPSREE-DVG-EIDYGIFFSIESLVFRFIA-IELDDFD-ALVTLTNSEVKFS 184

Query: 186 NDAGDIVLIAQENQCSIGGVSSEHQIQFQISLSPWASFRELARRVERVWIYKPNTSSFGI 245
            +  DI+L  + ++C IGGV    + +F + L+P   FR+LA +  R+W++K +  S+ I
Sbjct: 185 VNDKDIILYKERDECIIGGVEIGEESRFFVYLNPKVLFRDLAEQSARIWMFK-SPRSYSI 244

Query: 246 IAAPVGLYSRFLAYVP 252
             AP+GLY++F  Y P
Sbjct: 245 TVAPIGLYAQFCVYFP 248

[Close]

BLAST of CmoCh06G017230 vs. NCBI nr
Match: gi|659116807|ref|XP_008458269.1| (PREDICTED: uncharacterized protein LOC103497738 [Cucumis melo])

HSP 1 Score: 100.1 bits (248), Expect = 5.7e-18
Identity = 73/189 (38.62%), Postives = 102/189 (53.97%), Query Frame = 1


Query: 1   MFMFNLDNIHEFVEAASVISTQAPTGVLKFSPQMFSIMATALPPSPRSALALQIRPQFFR 60
           MF+F L+ IH FV+A SV++       LKFSP+MFSIMA    PSP   +ALQ+ P FF 
Sbjct: 1   MFVFILEEIHSFVDAVSVLAGLGYVFNLKFSPEMFSIMANP-TPSPSCTIALQLFPPFFN 60

Query: 61  SYTCTSQLEYAGIFLNDLQFTLYEMDCNGFPELLFSSTEPDCAHLTFRPPASIYNCRLYK 120
                 QL Y+ I++N     +++M+  GF  L FS  +   A LTF       + R   
Sbjct: 61  QQYSCQQLHYSWIYINPFFPEMFDMERTGFSSLTFSFADSLHADLTFCSRDG--HLREID 120

Query: 121 LPLCPGTGEMDMDL-EFDCTTFVSIPS-DFFNVVLNVFMDCFDYVLVTVTASLARFCNDA 180
            P+    G MD    + D  TFVS  S +F N+V    ++ FD VLVT+T S  +F + A
Sbjct: 121 FPMYHSDGSMDACYDQLDWETFVSFSSQEFINIVT---LNNFDSVLVTLTNSQVKF-SYA 180

Query: 181 GDIVLIAQE 188
           G  +++ QE
Sbjct: 181 GTQMILTQE 182

[Close]

BLAST of CmoCh06G017230 vs. NCBI nr
Match: gi|778686236|ref|XP_011652354.1| (PREDICTED: uncharacterized protein LOC101206630 isoform X2 [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 2.2e-17
Identity = 72/250 (28.80%), Postives = 127/250 (50.80%), Query Frame = 1


Query: 2   FMFNLDNIHEFVEAASVISTQAPTGVLKFSPQMFSIMATALPPSPRSALALQIRPQFFRS 61
           F F ++N+   V+A + +      G   FSP+MF +MA +   S  SA+ LQ+ P FF  
Sbjct: 4   FNFLVNNMRTLVDAFATLGLADHKGDATFSPEMFCLMADS-NVSIHSAIGLQLWPPFFDH 63

Query: 62  YTCTSQLEYAGIFLNDLQFTLYEMDCNGFPELLFS-STEPDCAHLTFRPPASIYNCRLYK 121
           Y C   L+ +  F +++      +   G+    FS   +P  A + F+ P  +      +
Sbjct: 64  YFCRD-LKNSWFFFSEIFPLAQYLKDFGYTSFSFSIGRDPHHAQIEFQGPTRLLLEVTLR 123

Query: 122 LPLCPGTGEMDMDL-EFDCTTFVSIPSDFFNVVLNVFMDCFDYVLVTVTASLARFCNDAG 181
           L  C     + + + +FD + FVS+ S  F+ +++ +   FD V VT+T+    F     
Sbjct: 124 LVFC----HLPLRIHQFDLSVFVSMDSQQFSNLISQY-HMFDDVHVTITSERVIFSYSTM 183

Query: 182 DIVLIAQENQCSIGGVSSEHQIQFQISLSPWASFRELARRVERVWIYKPNTSSFGIIAAP 241
              +++   QC IGG+ +  +++F I+L P   F  +A + +RVW +K   S+ G+I AP
Sbjct: 184 QETILSP--QCIIGGLRAPDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAP 243

Query: 242 VGLYSRFLAY 250
           +GL +R +A+
Sbjct: 244 LGLNARLVAF 244

The following BLAST results are available for this feature:

BLAST of CmoCh06G017230 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh06G017230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIF2_CUCSA	6.1e-19	29.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1	[more]
A0A0A0KA18_CUCSA	3.5e-14	29.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006750 PE=4 SV=1	[more]
A0A0A0KFM5_CUCSA	4.5e-14	30.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1	[more]
A0A0A0K9W8_CUCSA	4.2e-12	27.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1	[more]
A0A0A0K833_CUCSA	5.5e-12	42.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002320 PE=4 SV=1	[more]

BLAST of CmoCh06G017230 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmoCh06G017230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119586\|ref\|XP_008459734.1\|	1.0e-22	30.52	PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo]	[more]
gi\|778686233\|ref\|XP_004146827.2\|	8.8e-19	29.48	PREDICTED: uncharacterized protein LOC101206630 isoform X1 [Cucumis sativus]	[more]
gi\|659117581\|ref\|XP_008458677.1\|	2.6e-18	32.03	PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]	[more]
gi\|659116807\|ref\|XP_008458269.1\|	5.7e-18	38.62	PREDICTED: uncharacterized protein LOC103497738 [Cucumis melo]	[more]
gi\|778686236\|ref\|XP_011652354.1\|	2.2e-17	28.80	PREDICTED: uncharacterized protein LOC101206630 isoform X2 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G017230.1	CmoCh06G017230.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G017230	CmaCh06G017360	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G017230	Cp4.1LG08g06490	Cucurbita pepo (Zucchini)	cmocpeB796

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G017230	Wild cucumber (PI 183967)	cmocpiB818
CmoCh06G017230	Cucumber (Chinese Long) v2	cmocuB810
CmoCh06G017230	Melon (DHL92) v3.5.1	cmomeB748
CmoCh06G017230	Watermelon (Charleston Gray)	cmowcgB732
CmoCh06G017230	Watermelon (97103) v1	cmowmB785
CmoCh06G017230	Cucurbita pepo (Zucchini)	cmocpeB786
CmoCh06G017230	Bottle gourd (USVL1VR-Ls)	cmolsiB748
CmoCh06G017230	Cucumber (Gy14) v2	cgybcmoB404
CmoCh06G017230	Melon (DHL92) v3.6.1	cmomedB850
CmoCh06G017230	Silver-seed gourd	carcmoB0383
CmoCh06G017230	Cucumber (Chinese Long) v3	cmocucB0956
CmoCh06G017230	Watermelon (97103) v2	cmowmbB821
CmoCh06G017230	Wax gourd	cmowgoB0989
CmoCh06G017230	Cucumber (Gy14) v1	cgycmoB0941
CmoCh06G017230	Cucurbita maxima (Rimu)	cmacmoB270
CmoCh06G017230	Cucurbita maxima (Rimu)	cmacmoB273