CmoCh06G017110 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G017110
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DCD (Development and Cell Death) domain-like protein
Location	Cmo_Chr06 : 11777724 .. 11778239 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAGAAGAGAGGGAAAGCGTTAAAGGTTGAAGAACTTTTGAATCATTCTATCTCAAATAAAGGTGTTAAGAAACATATTAAGAAGAAGAAGTCAAGGAAGGCAAATGAAACTTCGAATTTGAAAGTTTCCCGTTCTTCTTCAAGCCAAGAACCCGTTAGTATTCCAACACACGACTCAGTTACAACTTTGATCCCTCCCAGTAATGATAAGAAGAAGTATAAAGAAACGGAGGAAAAGAAACATGTCTCTGGATTCATTTTTATGTGCAATGGAAAAACAAAGCCGGAATGTTATGAATATCGCGTTTTTGGCTTACCAAAAGGGAAAATTGAAGTTGTGAAGAATATAGCTCCTGATGCCAAGCTATTTCTTTTCGACACCGACTTGAAGCTTCTCTATGGCATTTACCAAGCTACTACTAAGGGTGCATTGGATTTGGAACCAAGAGCTTTCGATGGCCAATTTCAAGCACAGGTAAAAAAGATCGCCCTTATTGTTTATGTAGATTGA

mRNA sequence

ATGGCAAAGAAGAGAGGGAAAGCGTTAAAGGTTGAAGAACTTTTGAATCATTCTATCTCAAATAAAGGTGTTAAGAAACATATTAAGAAGAAGAAGTCAAGGAAGGCAAATGAAACTTCGAATTTGAAAGTTTCCCGTTCTTCTTCAAGCCAAGAACCCGTTAGTATTCCAACACACGACTCAGTTACAACTTTGATCCCTCCCAGTAATGATAAGAAGAAGTATAAAGAAACGGAGGAAAAGAAACATGTCTCTGGATTCATTTTTATGTGCAATGGAAAAACAAAGCCGGAATGTTATGAATATCGCGTTTTTGGCTTACCAAAAGGGAAAATTGAAGTTGTGAAGAATATAGCTCCTGATGCCAAGCTATTTCTTTTCGACACCGACTTGAAGCTTCTCTATGGCATTTACCAAGCTACTACTAAGGGTGCATTGGATTTGGAACCAAGAGCTTTCGATGGCCAATTTCAAGCACAGGTAAAAAAGATCGCCCTTATTGTTTATGTAGATTGA

Coding sequence (CDS)

ATGGCAAAGAAGAGAGGGAAAGCGTTAAAGGTTGAAGAACTTTTGAATCATTCTATCTCAAATAAAGGTGTTAAGAAACATATTAAGAAGAAGAAGTCAAGGAAGGCAAATGAAACTTCGAATTTGAAAGTTTCCCGTTCTTCTTCAAGCCAAGAACCCGTTAGTATTCCAACACACGACTCAGTTACAACTTTGATCCCTCCCAGTAATGATAAGAAGAAGTATAAAGAAACGGAGGAAAAGAAACATGTCTCTGGATTCATTTTTATGTGCAATGGAAAAACAAAGCCGGAATGTTATGAATATCGCGTTTTTGGCTTACCAAAAGGGAAAATTGAAGTTGTGAAGAATATAGCTCCTGATGCCAAGCTATTTCTTTTCGACACCGACTTGAAGCTTCTCTATGGCATTTACCAAGCTACTACTAAGGGTGCATTGGATTTGGAACCAAGAGCTTTCGATGGCCAATTTCAAGCACAGGTAAAAAAGATCGCCCTTATTGTTTATGTAGATTGA

Homology

[Close]

BLAST of CmoCh06G017110 vs. TrEMBL
Match: A0A0A0KTT6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G007630 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.2e-46
Identity = 109/165 (66.06%), Postives = 126/165 (76.36%), Query Frame = 1


Query: 1   MAKKRGKALKV---EELLNHSISNKGVKKHIKKKKSRKANETSNLKVSRSSSSQEPVSIP 60
           M KKRGKA K    EE L+HS   KG  + IKKKKSRK ++ S L V  ++  ++ V+ P
Sbjct: 19  MTKKRGKASKGKKGEEPLDHS--KKGANELIKKKKSRKMSKASILNVGYTTI-EDLVNGP 78

Query: 61  THDSVTTLIPPSNDKKKYKETEEKKHVSGFIFMCNGKTKPECYEYRVFGLPKGKIEVVKN 120
           T  S++T IPP ND+KK+++ E  K  SGFIFMCNGKTKPECY+YRVFGLPKGKIEVVKN
Sbjct: 79  TCASISTSIPPGNDQKKHEKVEGNKGTSGFIFMCNGKTKPECYQYRVFGLPKGKIEVVKN 138

Query: 121 IAPDAKLFLFDTDLKLLYGIYQATTKGALDLEPRAFDGQFQAQVK 163
           I  D KLFLFD DLKLLYGIYQAT  GALDLEP AF+GQFQAQVK
Sbjct: 139 INSDTKLFLFDIDLKLLYGIYQATGNGALDLEPTAFNGQFQAQVK 180

[Close]

BLAST of CmoCh06G017110 vs. TrEMBL
Match: M5XE56_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006802mg PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-30
Identity = 88/170 (51.76%), Postives = 106/170 (62.35%), Query Frame = 1


Query: 1   MAKKRGKALKVEEL-LNHSISNKGVKKHI--KKKKSRKANETSN-----LKVSRSSSSQE 60
           MAKKRGKA K + L L+H   +K + K +  KKKKSRK + +S        V  S  S  
Sbjct: 1   MAKKRGKASKGKGLPLSHDDGSKKIGKSLTKKKKKSRKISASSMPTPAPAPVLNSGPSAS 60

Query: 61  PVSIPTHDSVTTLIPPSNDKKKYKETEEKKHVSGFIFMCNGKTKPECYEYRVFGLPKGKI 120
            V+  T  S          + +  E +  +  SGFIFMCNGKTKPECY YRVFGLP GK+
Sbjct: 61  NVAHATSSSHANPTIREKVRPEKNEKDSGQSHSGFIFMCNGKTKPECYRYRVFGLPLGKV 120

Query: 121 EVVKNIAPDAKLFLFDTDLKLLYGIYQATTKGALDLEPRAFDGQFQAQVK 163
           EVVK I P  KLFL+D DLKLLYG Y+AT+ G LDLEP AF G+F AQV+
Sbjct: 121 EVVKKITPGTKLFLYDFDLKLLYGTYKATSNGGLDLEPIAFKGKFPAQVR 170

[Close]

BLAST of CmoCh06G017110 vs. TrEMBL
Match: A0A067ESL0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046426mg PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.4e-28
Identity = 81/166 (48.80%), Postives = 106/166 (63.86%), Query Frame = 1


Query: 1   MAKKRGKALKVEELLNHSISNKGVK--KHIKKKKSRKANETSNLKVSRSSSSQEPVSIPT 60
           MAKK GK +K +    +    K VK  K +KKK + KA+   +     SS S+ P   PT
Sbjct: 1   MAKKTGKKIKDQGSSINQSKKKIVKALKIVKKKLNIKASAVPS--DGPSSESKLPDVTPT 60

Query: 61  HDSVTTLIPPSND--KKKYKETEEKKHVSGFIFMCNGKTKPECYEYRVFGLPKGKIEVVK 120
               ++++   N+   ++  ETE  +  SGFIFMCNGKTK ECY YRVFGLP GK+++V+
Sbjct: 61  TVMTSSIVARGNEGASRRNPETEIAEQTSGFIFMCNGKTKSECYRYRVFGLPTGKLKLVE 120

Query: 121 NIAPDAKLFLFDTDLKLLYGIYQATTKGALDLEPRAFDGQFQAQVK 163
            I P + LFLFD DLKLLYG+Y AT++G L LEP AF G+F AQVK
Sbjct: 121 KIKPGSTLFLFDFDLKLLYGVYIATSEGELGLEPTAFSGRFPAQVK 164

[Close]

BLAST of CmoCh06G017110 vs. TrEMBL
Match: A0A061E3T3_THECC (DCD (Development and Cell Death) domain-like protein OS=Theobroma cacao GN=TCM_008340 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.4e-28
Identity = 83/177 (46.89%), Postives = 108/177 (61.02%), Query Frame = 1


Query: 1   MAKKRGKALKVE-ELLNHSISNKGVKKHIKKKKSRKANETSNLKVSRSSSSQEPVSIP-- 60
           M KK+GK  K +    NH   +K +KK   K K +K ++ +    S S+S   P S+P  
Sbjct: 11  MTKKKGKKFKSQGPPKNHPNVSKKMKKRYMKNKKKKRDKKA---ASTSNSGSSPRSVPDL 70

Query: 61  ------THDSVTTLIPPS------NDKKKYKETEEKKHVSGFIFMCNGKTKPECYEYRVF 120
                 T  + TT + P+       +K+K KE  EK  +   IFMCNGKTKPECY   VF
Sbjct: 71  VVAPSATFTTSTTFVLPTASNCGVQEKRKVKENGEK--IFECIFMCNGKTKPECYRNCVF 130

Query: 121 GLPKGKIEVVKNIAPDAKLFLFDTDLKLLYGIYQATTKGALDLEPRAFDGQFQAQVK 163
           GLP GK+EVVK I P  K+FLFD +LKLLYGIY+A ++G LDLEP AF+G+F AQV+
Sbjct: 131 GLPAGKLEVVKKIKPGTKIFLFDFNLKLLYGIYKAISEGELDLEPTAFNGKFPAQVR 182

[Close]

BLAST of CmoCh06G017110 vs. TrEMBL
Match: F6HJ68_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0150g00110 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.3e-28
Identity = 83/167 (49.70%), Postives = 108/167 (64.67%), Query Frame = 1


Query: 1   MAKKRGKALKVE-ELLNHSISNKGVKKHI--KKKKSRKANETSNLKVSRSSSSQEPVSIP 60
           MAK +GK  +     +N   ++K ++K    KKKK +K NE S L +  SS+S    +I 
Sbjct: 9   MAKSKGKKSRNNGPHVNPPNASKKIEKKSSKKKKKVKKINEASALDIGPSSTSTPNTTII 68

Query: 61  THDSVTTLIPP--SNDKKKYKETEEKKHVSGFIFMCNGKTKPECYEYRVFGLPKGKIEVV 120
              + T   PP  SN  +K KE   ++ V GFIFMCNGKTKP+CY+YRVFGLP G+ E V
Sbjct: 69  ASSNAT---PPNASNKGEKKKEKGNEEWVFGFIFMCNGKTKPQCYQYRVFGLPTGRKEEV 128

Query: 121 KNIAPDAKLFLFDTDLKLLYGIYQATTKGALDLEPRAFDGQFQAQVK 163
             I    KLFLFD DLKLLYGIY+A++KG ++LE  AF+G+F AQVK
Sbjct: 129 AKIKVGTKLFLFDFDLKLLYGIYEASSKGQMNLEQDAFNGKFPAQVK 172

[Close]

BLAST of CmoCh06G017110 vs. TAIR10
Match: AT5G61910.1 (AT5G61910.1 DCD (Development and Cell Death) domain protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-24
Identity = 45/86 (52.33%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 76  KETEEKKHVSGFIFMCNGKTKPECYEYRVFGLPKGKIEVVKNIAPDAKLFLFDTDLKLLY 135
           +  +  + + G+IFMCNG+TK +CY YRVFG+P+G  +VV++I P  KLFL+D + +LLY
Sbjct: 53  RRLDHHEQLPGYIFMCNGRTKTDCYRYRVFGIPRGGKDVVESIKPGMKLFLYDFEKRLLY 112

Query: 136 GIYQATTKGALDLEPRAFDGQFQAQV 162
           G+Y+AT  G LD+EP AF+G++ AQV
Sbjct: 113 GVYEATVGGRLDIEPEAFEGKYPAQV 138

[Close]

BLAST of CmoCh06G017110 vs. TAIR10
Match: AT2G32910.1 (AT2G32910.1 DCD (Development and Cell Death) domain protein)

HSP 1 Score: 95.5 bits (236), Expect = 3.4e-20
Identity = 43/95 (45.26%), Postives = 63/95 (66.32%), Query Frame = 1


Query: 68  PSNDKKKYKETEEKKHVSGFIFMCNGKTKPECYEYRVFGLPKGKIEVVKNIAPDAKLFLF 127
           P + +K+  +   K  + G IFMCN KT+P+C+ + V G+ + + + VK I P  KLFL+
Sbjct: 303 PVDPEKREMDGPGKVKIGGLIFMCNTKTRPDCFRFSVMGVQEKRKDFVKGIKPGLKLFLY 362

Query: 128 DTDLKLLYGIYQATTKGALDLEPRAFDGQFQAQVK 163
           D DLKLLYGI++A++ G + LE  AF G F AQV+
Sbjct: 363 DYDLKLLYGIFEASSAGGMKLERNAFGGSFPAQVR 397

[Close]

BLAST of CmoCh06G017110 vs. TAIR10
Match: AT2G35140.1 (AT2G35140.1 DCD (Development and Cell Death) domain protein)

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12
Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 1


Query: 86  GFIFMCNGKTKPECYEYRVFGLPKGKIEVVKNIAPDAKLFLFDTDLKLLYGIYQATTKGA 145
           G IFM N  T+ EC   ++FGLP G    VK++     LFLF+ + + L+G++QA + GA
Sbjct: 23  GAIFMSNNSTRKECLSRKLFGLPIGLGGFVKHVKAGMMLFLFEFEKRELHGVFQACSDGA 82

Query: 146 LDLEPRAFDG---QFQAQVK 163
           +++EP AF     QF AQVK
Sbjct: 83  INIEPNAFRSSGKQFPAQVK 102

[Close]

BLAST of CmoCh06G017110 vs. TAIR10
Match: AT3G11000.2 (AT3G11000.2 DCD (Development and Cell Death) domain protein)

HSP 1 Score: 62.8 bits (151), Expect = 2.4e-10
Identity = 32/89 (35.96%), Postives = 50/89 (56.18%), Query Frame = 1


Query: 80  EKKHVSGFIFMCNGKTKPECYEYRVFGLPKGKIEVVKNIAPDAKLFLFDTDLKLLYGIYQ 139
           +K  + G IF C   T  ECY   +FGLP   +  +KNI P   LFLF+   + L+GI++
Sbjct: 126 KKGDLCGVIFGCKFSTIKECYAKNLFGLPAPHMAYIKNIDPGLTLFLFNYSDRTLHGIFE 185

Query: 140 ATTKGALDLEPRAFD------GQFQAQVK 163
           A ++G L+++ +A+         + AQVK
Sbjct: 186 AASEGKLNIDSKAWSPNGTDPSPYPAQVK 214

[Close]

BLAST of CmoCh06G017110 vs. TAIR10
Match: AT5G42050.1 (AT5G42050.1 DCD (Development and Cell Death) domain protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.5e-07
Identity = 42/157 (26.75%), Postives = 75/157 (47.77%), Query Frame = 1


Query: 15  LNHSISNKGVKKHIKKKKSRKANETSNLKVSRSSSSQEPVSIPTHDSVTTLIPPSNDKKK 74
           L ++  NKG+ +  + +K  K N  +  + + ++   E       D     +PP+     
Sbjct: 155 LKNNNKNKGIDEDHQIQKGGKKNRKN--QQNNNNQRNEDDKNNGLDKRFKTLPPA----- 214

Query: 75  YKETEEKKHVSGFIFMCNGKTKPECYEYRVFGLPKGKIEVVKNIAPDAKLFLFDTDLKLL 134
            +     + + G+IF+CN  T  E  + ++FGLP    + V+ I P   LFL++     L
Sbjct: 215 -EALPRNETIGGYIFVCNNDTMEENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQL 274

Query: 135 YGIYQATTKGALDLEPRAF-------DGQFQAQVKKI 165
           +GIY+A + G  ++E  AF       + +F AQV+ I
Sbjct: 275 HGIYEAASFGGTNIELNAFEDKKCPGESRFPAQVRAI 303

[Close]

BLAST of CmoCh06G017110 vs. NCBI nr
Match: gi|659108348|ref|XP_008454151.1| (PREDICTED: uncharacterized protein LOC103494640 isoform X1 [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 3.2e-49
Identity = 107/162 (66.05%), Postives = 128/162 (79.01%), Query Frame = 1


Query: 1   MAKKRGKALKVEELLNHSISNKGVKKHIKKKKSRKANETSNLKVSRSSSSQEPVSIPTHD 60
           M K+RGKALK +E LNHS    G    I KKK+RK +  S LKV+ ++S ++ V+ PT  
Sbjct: 20  MTKRRGKALKGKERLNHS--KNGANNLINKKKARKMSRASTLKVAHTASREDLVNGPTCA 79

Query: 61  SVTTLIPPSNDKKKYKETEEKKHVSGFIFMCNGKTKPECYEYRVFGLPKGKIEVVKNIAP 120
           SV+T IPP +D++K+++ E  +  SGFIFMCNGKTKPECY+YRVFGLPKGKIEVV+NI P
Sbjct: 80  SVSTSIPPVDDREKHEKVEGNEGTSGFIFMCNGKTKPECYQYRVFGLPKGKIEVVENINP 139

Query: 121 DAKLFLFDTDLKLLYGIYQATTKGALDLEPRAFDGQFQAQVK 163
           D KLFLFDTDLKLLYGIYQAT  GALDLEP AF+GQFQAQVK
Sbjct: 140 DTKLFLFDTDLKLLYGIYQATDNGALDLEPTAFNGQFQAQVK 179

[Close]

BLAST of CmoCh06G017110 vs. NCBI nr
Match: gi|659108350|ref|XP_008454152.1| (PREDICTED: uncharacterized protein LOC103494640 isoform X2 [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 3.2e-49
Identity = 107/162 (66.05%), Postives = 128/162 (79.01%), Query Frame = 1


Query: 1   MAKKRGKALKVEELLNHSISNKGVKKHIKKKKSRKANETSNLKVSRSSSSQEPVSIPTHD 60
           M K+RGKALK +E LNHS    G    I KKK+RK +  S LKV+ ++S ++ V+ PT  
Sbjct: 1   MTKRRGKALKGKERLNHS--KNGANNLINKKKARKMSRASTLKVAHTASREDLVNGPTCA 60

Query: 61  SVTTLIPPSNDKKKYKETEEKKHVSGFIFMCNGKTKPECYEYRVFGLPKGKIEVVKNIAP 120
           SV+T IPP +D++K+++ E  +  SGFIFMCNGKTKPECY+YRVFGLPKGKIEVV+NI P
Sbjct: 61  SVSTSIPPVDDREKHEKVEGNEGTSGFIFMCNGKTKPECYQYRVFGLPKGKIEVVENINP 120

Query: 121 DAKLFLFDTDLKLLYGIYQATTKGALDLEPRAFDGQFQAQVK 163
           D KLFLFDTDLKLLYGIYQAT  GALDLEP AF+GQFQAQVK
Sbjct: 121 DTKLFLFDTDLKLLYGIYQATDNGALDLEPTAFNGQFQAQVK 160

[Close]

BLAST of CmoCh06G017110 vs. NCBI nr
Match: gi|449468908|ref|XP_004152163.1| (PREDICTED: uncharacterized protein LOC101205772 isoform X1 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 7.5e-46
Identity = 109/165 (66.06%), Postives = 126/165 (76.36%), Query Frame = 1


Query: 1   MAKKRGKALKV---EELLNHSISNKGVKKHIKKKKSRKANETSNLKVSRSSSSQEPVSIP 60
           M KKRGKA K    EE L+HS   KG  + IKKKKSRK ++ S L V  ++  ++ V+ P
Sbjct: 19  MTKKRGKASKGKKGEEPLDHS--KKGANELIKKKKSRKMSKASILNVGYTTI-EDLVNGP 78

Query: 61  THDSVTTLIPPSNDKKKYKETEEKKHVSGFIFMCNGKTKPECYEYRVFGLPKGKIEVVKN 120
           T  S++T IPP ND+KK+++ E  K  SGFIFMCNGKTKPECY+YRVFGLPKGKIEVVKN
Sbjct: 79  TCASISTSIPPGNDQKKHEKVEGNKGTSGFIFMCNGKTKPECYQYRVFGLPKGKIEVVKN 138

Query: 121 IAPDAKLFLFDTDLKLLYGIYQATTKGALDLEPRAFDGQFQAQVK 163
           I  D KLFLFD DLKLLYGIYQAT  GALDLEP AF+GQFQAQVK
Sbjct: 139 INSDTKLFLFDIDLKLLYGIYQATGNGALDLEPTAFNGQFQAQVK 180

[Close]

BLAST of CmoCh06G017110 vs. NCBI nr
Match: gi|778689730|ref|XP_011653007.1| (PREDICTED: uncharacterized protein LOC101205772 isoform X2 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 7.5e-46
Identity = 109/165 (66.06%), Postives = 126/165 (76.36%), Query Frame = 1


Query: 1   MAKKRGKALKV---EELLNHSISNKGVKKHIKKKKSRKANETSNLKVSRSSSSQEPVSIP 60
           M KKRGKA K    EE L+HS   KG  + IKKKKSRK ++ S L V  ++  ++ V+ P
Sbjct: 1   MTKKRGKASKGKKGEEPLDHS--KKGANELIKKKKSRKMSKASILNVGYTTI-EDLVNGP 60

Query: 61  THDSVTTLIPPSNDKKKYKETEEKKHVSGFIFMCNGKTKPECYEYRVFGLPKGKIEVVKN 120
           T  S++T IPP ND+KK+++ E  K  SGFIFMCNGKTKPECY+YRVFGLPKGKIEVVKN
Sbjct: 61  TCASISTSIPPGNDQKKHEKVEGNKGTSGFIFMCNGKTKPECYQYRVFGLPKGKIEVVKN 120

Query: 121 IAPDAKLFLFDTDLKLLYGIYQATTKGALDLEPRAFDGQFQAQVK 163
           I  D KLFLFD DLKLLYGIYQAT  GALDLEP AF+GQFQAQVK
Sbjct: 121 INSDTKLFLFDIDLKLLYGIYQATGNGALDLEPTAFNGQFQAQVK 162

[Close]

BLAST of CmoCh06G017110 vs. NCBI nr
Match: gi|694359617|ref|XP_009359876.1| (PREDICTED: uncharacterized protein LOC103950401 [Pyrus x bretschneideri])

HSP 1 Score: 146.0 bits (367), Expect = 6.1e-32
Identity = 88/174 (50.57%), Postives = 118/174 (67.82%), Query Frame = 1


Query: 1   MAKKRGKALKVEEL-LNHSISNKGVKKHIKKKKSRKANETSNLKVSRSS---SSQEPVSI 60
           MAKKRGKALK +++ +N++  NK ++K + KKK +      ++K+S SS   S+  P S 
Sbjct: 1   MAKKRGKALKGKDVAVNYNDRNKKIEKKLTKKKKK------SMKISASSVPTSAPVPNSG 60

Query: 61  PTHDSVTTLIPPSN----DKKKYKETEEKKHV----SGFIFMCNGKTKPECYEYRVFGLP 120
           P+  +V      S+     +KK + T+ +K      SGFIFMC+GKTKPECY YRVFGLP
Sbjct: 61  PSTSNVAHATSSSHANPTGRKKLRPTKNEKDSGHSHSGFIFMCSGKTKPECYRYRVFGLP 120

Query: 121 KGKIEVVKNIAPDAKLFLFDTDLKLLYGIYQATTKGALDLEPRAFDGQFQAQVK 163
             K++VVKNI P AKLFL+D DLKLLYG Y+AT+ G +DLEP AF G+F AQV+
Sbjct: 121 LAKVDVVKNIRPGAKLFLYDFDLKLLYGTYKATSNGGVDLEPIAFKGKFPAQVR 168

The following BLAST results are available for this feature:

BLAST of CmoCh06G017110 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh06G017110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTT6_CUCSA	5.2e-46	66.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G007630 PE=4 SV=1	[more]
M5XE56_PRUPE	1.8e-30	51.76	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006802mg PE=4 SV=1	[more]
A0A067ESL0_CITSI	6.4e-28	48.80	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046426mg PE=4 SV=1	[more]
A0A061E3T3_THECC	6.4e-28	46.89	DCD (Development and Cell Death) domain-like protein OS=Theobroma cacao GN=TCM_0...	[more]
F6HJ68_VITVI	8.3e-28	49.70	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0150g00110 PE=4 SV=...	[more]

BLAST of CmoCh06G017110 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61910.1	1.7e-24	52.33	DCD (Development and Cell Death) domain protein	[more]
AT2G32910.1	3.4e-20	45.26	DCD (Development and Cell Death) domain protein	[more]
AT2G35140.1	1.2e-12	43.75	DCD (Development and Cell Death) domain protein	[more]
AT3G11000.2	2.4e-10	35.96	DCD (Development and Cell Death) domain protein	[more]
AT5G42050.1	2.5e-07	26.75	DCD (Development and Cell Death) domain protein	[more]

BLAST of CmoCh06G017110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659108348\|ref\|XP_008454151.1\|	3.2e-49	66.05	PREDICTED: uncharacterized protein LOC103494640 isoform X1 [Cucumis melo]	[more]
gi\|659108350\|ref\|XP_008454152.1\|	3.2e-49	66.05	PREDICTED: uncharacterized protein LOC103494640 isoform X2 [Cucumis melo]	[more]
gi\|449468908\|ref\|XP_004152163.1\|	7.5e-46	66.06	PREDICTED: uncharacterized protein LOC101205772 isoform X1 [Cucumis sativus]	[more]
gi\|778689730\|ref\|XP_011653007.1\|	7.5e-46	66.06	PREDICTED: uncharacterized protein LOC101205772 isoform X2 [Cucumis sativus]	[more]
gi\|694359617\|ref\|XP_009359876.1\|	6.1e-32	50.57	PREDICTED: uncharacterized protein LOC103950401 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013989	Dev_and_cell_death_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G017110.1	CmoCh06G017110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013989	Development/cell death domain	PFAM	PF10539	Dev_Cell_Death	coord: 86..162 score: 5.3
IPR013989	Development/cell death domain	SMART	SM00767	dcd	coord: 82..169 score: 2.7
IPR013989	Development/cell death domain	PROFILE	PS51222	DCD	coord: 82..171 score: 36
None	No IPR available	PANTHER	PTHR10857	COPINE	coord: 70..162 score: 2.1
None	No IPR available	PANTHER	PTHR10857:SF12	SUBFAMILY NOT NAMED	coord: 70..162 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G017110	Cucsa.095790	Cucumber (Gy14) v1	cgycmoB0199
CmoCh06G017110	CmaCh06G017220	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G017110	Cla012767	Watermelon (97103) v1	cmowmB792
CmoCh06G017110	Csa4G007630	Cucumber (Chinese Long) v2	cmocuB823
CmoCh06G017110	MELO3C017821	Melon (DHL92) v3.5.1	cmomeB761
CmoCh06G017110	ClCG07G011980	Watermelon (Charleston Gray)	cmowcgB748
CmoCh06G017110	CSPI04G02200	Wild cucumber (PI 183967)	cmocpiB833
CmoCh06G017110	Lsi07G003950	Bottle gourd (USVL1VR-Ls)	cmolsiB764
CmoCh06G017110	Cp4.1LG08g06420	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G017110	MELO3C017821.2	Melon (DHL92) v3.6.1	cmomedB865
CmoCh06G017110	CsaV3_4G002170	Cucumber (Chinese Long) v3	cmocucB0971
CmoCh06G017110	Cla97C07G138720	Watermelon (97103) v2	cmowmbB839
CmoCh06G017110	Bhi01G002840	Wax gourd	cmowgoB1015
CmoCh06G017110	CsGy4G002160	Cucumber (Gy14) v2	cgybcmoB535
CmoCh06G017110	Carg15418	Silver-seed gourd	carcmoB0947

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G017110	Cucurbita pepo (Zucchini)	cmocpeB787
CmoCh06G017110	Silver-seed gourd	carcmoB0167
CmoCh06G017110	Cucurbita moschata (Rifu)	cmocmoB224
CmoCh06G017110	Cucurbita maxima (Rimu)	cmacmoB271