CmoCh06G016660 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAACCCCAATTTAACTCTTGTTCGAAGCCCTCCGGCTCCGATCGTTCGAAGTTCTCCTTCGGCCTCTTCTCAAATTTGCCTGTTTCTTCTCTGAAAATCTTAGAATTGCCTTAAACCCTAACTATTACACTGACCACAACCTCTGTTTCGTGAAGTTCTGGGTAAAGGATGCAGCACGACGAGGTGATATGGCAGGTCATCCGCCACAATCACTGCAGCTTCATGGCCAAGTCGGTTTTGCTTCTTTTCTTTCAGCGTTTGAACTTTTTTTCTTTTTCGTACGCTTCTTGTTTCAAATGTGTTATTTCATTTTCTCTTTTGAAATTTTGACTGGTTTTGGTGTTCTGTAGGATTTCAACGGGGAATTTCTGCAGAAACCCTTATAATGTAACTGGGATATGTAATCGGAGTTCATGTCCATTGGCTAACAGTCGCTATGCTACTATTCGCGATCATGACGGTACTACCTATAGCTCATTATTTCCATTTTGGTCTCCTCGTGAATTGTTGCTGCTCTGCTTTTATTCTCTCTATTTTAGCGCAGTCTTACTTGTATTGTTAAAAAACTCTCTTTTGCACTCATGGATTGATAAAAGTGAATCTTTGTAGCTCTAGTTGTTATTAATATTATTGCCTGCAGAAGTAAATTGAAGAGTGATCCAGAGTCGCTTCACATTTTTGAAGAATAAAAGAAAAGGAAATGGTTTCATTGACTATCCTACTTATACGCTAAATATAATTCTATTGTTCCTCCAGGAGTTTTCTATCTTTATATGAAAACAATTGAAAGAGCACATAAGCCAAATGAGTTGTGGGAAAGAGTTAAGTTACCCAGAAATTATGAGAAGGCACTGGAAATTATAGATAAACATCTGGTAAGTAATCATCTTAGTTACTTATGGTCAACATTTTAGTTTATCTATTTGATTCTCTTTTATAAATTCCTTAACCTATCTTTTATGTCCCCTATCTTTTATGTCCTTCAACAGATGTATTGGCCTAAGATACTTGTACACAAAACAAAACAACGATTGACTAAGATGACCCAAATGCGGATACGAATGAGAAAGCTTGCTCTGAAAACAAGGTTTGCTTTTGTCTGCGCATTTATTTCTTTCGGAAATGGAAGCTGTTGTTCTATCTATATTCATACATGGGTATTTGATAACCTTCATTTTGTTCATCTCTTTTGCTTTTGTCATTCCGATTGATAACTTGATAGAGAATATACGTGTTTTCATCGAGTCTCTTCATCCATTCCTCATGTTCTATATTGTCACTTTGAGAATTGTGCATATTGAAGAATTGTAGTCTTTCATTTCCTTAATCATGTATTGTGCATCTAATCAGATGCATTAATGAGAAGCAGTGTATTATAAATATTTACAAGGTTATATTTTGTTTATATTTTTGACCATATATCACTTCAATTACCAAACAGGGAGAAAATAATGACAACACCCAGAAAAGAGATTAAAAGAGAAGCCAGGAGGGAGCAAAAGGCTGAAAAAGCAGCATTGTTGGATAAGGTTGTACCTCAAATATTTATGTTGAAAATTTGATATATCTTTATATTGAAACTAATGAACTCTTTTTTGTTTCTGCTAGAAATATTTTCCTTGACTGAGTAGTTAGTGTGGGGAAAATGAATCTAATATGTACTTTTTTTGCAGAGCATTGAAAAGGAACTACTGGAACGGCTTAAGAAAGGAGTGTATGGTGATATATATAACTACCCTGTCGAAGCATATAATGAAGTTCTTGAAATGGAAGAATTGCAGGCTGCCAGTGAAGAGGAGGAGGTAGTGTTGCAAAATTTATTGGTACACTTGCCCTTCTCATTCCTTGAGGGATGATTCTGGGACTTAGATGAATGATTTTTATATTCCATCATTTGATAACTCGTATTTTTCCTTGGAATATGCAGGAACCTGAAATTGAATATGTTGAAGGGTATGAAGAATTAGAAGAAGAAGAAGATATGGAAGATTTTGGTGGCCTTGCAATCCATAATCCAGAAGCAGATGAAGATAGTGGTAATACAGTTTAGAATTTATAATAACAAATGGTTTTGAACTCTCAATAAATCTTTGTTCTCGTTTCTATTTGTGAGATCCTACGTCAACTGGAGAGGGGAGTGATGCATTCCTCATAGGGCATGGAAGCCTCTCCCTAGTAGACGCGTTTTAAAACTGTGAGGCTAACAGCAATACGTAACGGGCCAAAACAGACAATATTTACTAGCGGTGGGCTTGGACTGTTACAAATAGTATCAAAGTTAGACACCAGATGGTGGTGTGGCAGCGAGGACGCTGGGTCCTCAAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACTAAGCATCCCCTTCTAAGGGTGTGGAAACCTTTCCCTAGTAGACACGTTTTAAAATCATGATGCTGACAACAATACATAATAGACTAAAACGGCCAAAACGAATAATATGGATTTGTGCTATTACACTATTAGAGATGTATGATCTCTATTCATTTGGATAATATATACCTAGATCTTGCAATACCAAAAGGTGGTCTTTGTCCTGGCTATAATAGGTGCATAAAAAGTGGGTTTTGTTCGATGTTATTAGAATTGAGTGTAAATGTTCTGATGATTCAGATGGAATAGATGAAGACCTTGAAGACGTAGACGTTCCTCGCAAGAGAGGAAGAAAGGAGTCCACTTATTCTTTGAGGAAGGTCGAGAAAGATGCTCGTGCCAAACTGAAGAAGAAAGCAAAGGTTATAGTTGAGGTAATAGATGATTTCCTACCATCATTCTCCATAGTTTTTGAAGCCTCATTTTTTTAGTATTACAACTAGGTGGAGATTTGAATGTCCCTTAATGTCTTTTAGTCTTTTGTGTGCCACTTCCATTCTGCATTTGCTTTGTTGGGCACGTTTTTAAAAATAGAGCTATGATACTTGGTTTGTGTGTGCGCTACTTCTTCCATTGTTGTCGTAATTTTTGGTTATGAAATTCGGTTTCTTGTGCTATGTTGTTAGGTTGAGAACGAAGATGCTGATGAGCGCCAAACAACAGTCCACTAGACGTTTTTTTGGCTGTTGTTGTATAGGAAGGAAGGCTAAGGAAAAGCTCTTTTCCATGTAACAAGACTGTCTGTCAATACGATTTGTTTCTTCGCAAGGGCGACGTTAAGTGGCTCGAGCAGTAA AAACCCCAATTTAACTCTTGTTCGAAGCCCTCCGGCTCCGATCGTTCGAAGTTCTCCTTCGGCCTCTTCTCAAATTTGCCTGTTTCTTCTCTGAAAATCTTAGAATTGCCTTAAACCCTAACTATTACACTGACCACAACCTCTGTTTCGTGAAGTTCTGGGTAAAGGATGCAGCACGACGAGGTGATATGGCAGGTCATCCGCCACAATCACTGCAGCTTCATGGCCAAGATTTCAACGGGGAATTTCTGCAGAAACCCTTATAATGTAACTGGGATATGTAATCGGAGTTCATGTCCATTGGCTAACAGTCGCTATGCTACTATTCGCGATCATGACGGTACTACCTATAGCTCATTATTTCCATTTTGGTCTCCTCGTGAATTGTTGCTGCTCTGCTTTTATTCTCTCTATTTTAGCGCAGTCTTACTTGTATTGTTAAAAAACTCTCTTTTGCACTCATGGATTGATAAAAGAGTTTTCTATCTTTATATGAAAACAATTGAAAGAGCACATAAGCCAAATGAGTTGTGGGAAAGAGTTAAGTTACCCAGAAATTATGAGAAGGCACTGGAAATTATAGATAAACATCTGTTTATCTATTTGATTCTCTTTTATAAATTCCTTAACCTATCTTTTATGTCCCCTATCTTTTATGTCCTTCAACAGATGTATTGGCCTAAGATACTTGTACACAAAACAAAACAACGATTGACTAAGATGACCCAAATGCGGATACGAATGAGAAAGCTTGCTCTGAAAACAAGGGAGAAAATAATGACAACACCCAGAAAAGAGATTAAAAGAGAAGCCAGGAGGGAGCAAAAGGCTGAAAAAGCAGCATTGTTGGATAAGAGCATTGAAAAGGAACTACTGGAACGGCTTAAGAAAGGAGTGTATGGTGATATATATAACTACCCTGTCGAAGCATATAATGAAGTTCTTGAAATGGAAGAATTGCAGGCTGCCAGTGAAGAGGAGGAGGTAGTGTTGCAAAATTTATTGGAACCTGAAATTGAATATGTTGAAGGGTATGAAGAATTAGAAGAAGAAGAAGATATGGAAGATTTTGGTGGCCTTGCAATCCATAATCCAGAAGCAGATGAAGATAGTGATGGAATAGATGAAGACCTTGAAGACGTAGACGTTCCTCGCAAGAGAGGAAGAAAGGAGTCCACTTATTCTTTGAGGAAGGTCGAGAAAGATGCTCGTGCCAAACTGAAGAAGAAAGCAAAGGTTATAGTTGAGGTTGAGAACGAAGATGCTGATGAGCGCCAAACAACAGAAGGAAGGCTAAGGAAAAGCTCTTTTCCATGTAACAAGACTGTCTGTCAATACGATTTGTTTCTTCGCAAGGGCGACGTTAAGTGGCTCGAGCAGTAA ATGCAGCACGACGAGGTGATATGGCAGGTCATCCGCCACAATCACTGCAGCTTCATGGCCAAGATTTCAACGGGGAATTTCTGCAGAAACCCTTATAATGTAACTGGGATATGTAATCGGAGTTCATGTCCATTGGCTAACAGTCGCTATGCTACTATTCGCGATCATGACGGTACTACCTATAGCTCATTATTTCCATTTTGGTCTCCTCGTGAATTGTTGCTGCTCTGCTTTTATTCTCTCTATTTTAGCGCAGTCTTACTTGTATTGTTAAAAAACTCTCTTTTGCACTCATGGATTGATAAAAGAGTTTTCTATCTTTATATGAAAACAATTGAAAGAGCACATAAGCCAAATGAGTTGTGGGAAAGAGTTAAGTTACCCAGAAATTATGAGAAGGCACTGGAAATTATAGATAAACATCTGTTTATCTATTTGATTCTCTTTTATAAATTCCTTAACCTATCTTTTATGTCCCCTATCTTTTATGTCCTTCAACAGATGTATTGGCCTAAGATACTTGTACACAAAACAAAACAACGATTGACTAAGATGACCCAAATGCGGATACGAATGAGAAAGCTTGCTCTGAAAACAAGGGAGAAAATAATGACAACACCCAGAAAAGAGATTAAAAGAGAAGCCAGGAGGGAGCAAAAGGCTGAAAAAGCAGCATTGTTGGATAAGAGCATTGAAAAGGAACTACTGGAACGGCTTAAGAAAGGAGTGTATGGTGATATATATAACTACCCTGTCGAAGCATATAATGAAGTTCTTGAAATGGAAGAATTGCAGGCTGCCAGTGAAGAGGAGGAGGTAGTGTTGCAAAATTTATTGGAACCTGAAATTGAATATGTTGAAGGGTATGAAGAATTAGAAGAAGAAGAAGATATGGAAGATTTTGGTGGCCTTGCAATCCATAATCCAGAAGCAGATGAAGATAGTGATGGAATAGATGAAGACCTTGAAGACGTAGACGTTCCTCGCAAGAGAGGAAGAAAGGAGTCCACTTATTCTTTGAGGAAGGTCGAGAAAGATGCTCGTGCCAAACTGAAGAAGAAAGCAAAGGTTATAGTTGAGGTTGAGAACGAAGATGCTGATGAGCGCCAAACAACAGAAGGAAGGCTAAGGAAAAGCTCTTTTCCATGTAACAAGACTGTCTGTCAATACGATTTGTTTCTTCGCAAGGGCGACGTTAAGTGGCTCGAGCAGTAA
BLAST of CmoCh06G016660 vs. Swiss-Prot
Match: MAK16_MOUSE (Protein MAK16 homolog OS=Mus musculus GN=Mak16 PE=1 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.8e-34 Identity = 109/267 (40.82%), Postives = 152/267 (56.93%), Query Frame = 1
BLAST of CmoCh06G016660 vs. Swiss-Prot
Match: MK16B_XENLA (Protein MAK16 homolog B OS=Xenopus laevis GN=mak16-b PE=2 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 4.5e-33 Identity = 115/287 (40.07%), Postives = 155/287 (54.01%), Query Frame = 1
BLAST of CmoCh06G016660 vs. Swiss-Prot
Match: MAK16_XENTR (Protein MAK16 homolog OS=Xenopus tropicalis GN=mak16 PE=2 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 3.8e-32 Identity = 117/281 (41.64%), Postives = 157/281 (55.87%), Query Frame = 1
BLAST of CmoCh06G016660 vs. Swiss-Prot
Match: MK16A_XENLA (Protein MAK16 homolog A OS=Xenopus laevis GN=mak16-a PE=2 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 5.0e-32 Identity = 107/269 (39.78%), Postives = 156/269 (57.99%), Query Frame = 1
BLAST of CmoCh06G016660 vs. Swiss-Prot
Match: MAK16_DANRE (Protein MAK16 homolog OS=Danio rerio GN=mak16 PE=2 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.4e-31 Identity = 105/271 (38.75%), Postives = 153/271 (56.46%), Query Frame = 1
BLAST of CmoCh06G016660 vs. TrEMBL
Match: A0A0A0KYX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G012370 PE=4 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 1.4e-105 Identity = 223/273 (81.68%), Postives = 235/273 (86.08%), Query Frame = 1
BLAST of CmoCh06G016660 vs. TrEMBL
Match: A0A058ZZ92_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01009 PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 1.9e-91 Identity = 220/375 (58.67%), Postives = 251/375 (66.93%), Query Frame = 1
BLAST of CmoCh06G016660 vs. TrEMBL
Match: A0A059A071_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01009 PE=4 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 5.6e-91 Identity = 220/377 (58.36%), Postives = 251/377 (66.58%), Query Frame = 1
BLAST of CmoCh06G016660 vs. TrEMBL
Match: A0A068UXW1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00038095001 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 7.4e-91 Identity = 220/375 (58.67%), Postives = 245/375 (65.33%), Query Frame = 1
BLAST of CmoCh06G016660 vs. TrEMBL
Match: D7SHJ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g09220 PE=4 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 4.8e-90 Identity = 217/371 (58.49%), Postives = 243/371 (65.50%), Query Frame = 1
BLAST of CmoCh06G016660 vs. TAIR10
Match: AT1G23280.1 (AT1G23280.1 MAK16 protein-related) HSP 1 Score: 219.9 bits (559), Expect = 2.8e-57 Identity = 152/280 (54.29%), Postives = 184/280 (65.71%), Query Frame = 1
BLAST of CmoCh06G016660 vs. NCBI nr
Match: gi|659108097|ref|XP_008454017.1| (PREDICTED: protein MAK16 homolog [Cucumis melo]) HSP 1 Score: 399.4 bits (1025), Expect = 7.3e-108 Identity = 225/269 (83.64%), Postives = 233/269 (86.62%), Query Frame = 1
BLAST of CmoCh06G016660 vs. NCBI nr
Match: gi|449468816|ref|XP_004152117.1| (PREDICTED: protein MAK16 homolog [Cucumis sativus]) HSP 1 Score: 391.3 bits (1004), Expect = 2.0e-105 Identity = 223/273 (81.68%), Postives = 235/273 (86.08%), Query Frame = 1
BLAST of CmoCh06G016660 vs. NCBI nr
Match: gi|629080752|gb|KCW47197.1| (hypothetical protein EUGRSUZ_K01009 [Eucalyptus grandis]) HSP 1 Score: 344.4 bits (882), Expect = 2.8e-91 Identity = 220/375 (58.67%), Postives = 251/375 (66.93%), Query Frame = 1
BLAST of CmoCh06G016660 vs. NCBI nr
Match: gi|629080753|gb|KCW47198.1| (hypothetical protein EUGRSUZ_K01009 [Eucalyptus grandis]) HSP 1 Score: 342.8 bits (878), Expect = 8.1e-91 Identity = 220/377 (58.36%), Postives = 251/377 (66.58%), Query Frame = 1
BLAST of CmoCh06G016660 vs. NCBI nr
Match: gi|661883018|emb|CDP13226.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90 Identity = 220/375 (58.67%), Postives = 245/375 (65.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |