CmoCh06G016650 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCAAGCTCTCCTTTCAAGAAATCTTCTCCACACAAACACAAGATGAAGGTAAGAGTTCATTCTTTGATGAATCTTTGTAAGAACTATCCTAATTTTGAGCCTAAACTTCTCTTGTAAATTGATCAGTTATTAGGATGGATGCATCGCAAGTTCAGGCAAAACAGCGGCGATCCCCACAAAGATTTTGTCATTGGTAATAGCTCTAATCTATATCATGGCATCGTGAACTCATGAACTTTATAAGTTTAAACGTGAGATCTCATGTCAGTTGGTGAGGAGAACGAAGCATTCCATATAAGGGTGTAGAAACCTCTATTTAACAAACGCGTTTTAAAAACCTTGAGTGAAAGCTCAACGGGGTAAATATCTGCAAGTGGTGGGCTTGGCCTGTTACAAATGGTATCAGAGTCAATCACCGGACGGTGCAAGACACTGGTCGGAGTAGGGCTAGACCCTCTCTGTAGTAGATGCGTTTTAAAACTTTGAGGGGAAGCGTAGAATGAAAAGCCCAAAAAAGACAATATTTGCTAGCGTTGGGCTTGGACGGTTACAAATGGTATCAGAGTCAGGCTACTGAACGGTGCGAGACACTGGTTGGAGTAGGGCTAGACCCTCTCTATAGCATACACATTTTAAAACTTTGAGGGGAAGTCTAGAACGGAAAGCCCAAAAAAGAGAAAATCTGCTAGCGTTGGGCTTAGACTGTTACAAATGGTATCAGAGTCAGGCTACTAAACGGTGCGAGACACTGGTAGTAGGGCTAGACCCCTCTCCATAGTAGACGCATTCTAAAACCTTGAGGGAAAGTTAAGAAAGGAAAGTACAGGATAATATCTACTAGCGATGGGCTTGGACTTTTACAAATGGTATCAGAGCCAAGTTACTAGACGGTGCGAGACTCCAAGAATAGGACTAGACCCTCTTCTATAGTAGATGCATTTTAAAACCTTGAGGGAAAGTCCAGGAGTGAAAACTCAAATAGGACAATATCTACTCGCGGTGGGCTGGGGTTGTTACAAATGGTATCAAAGCCAGATTATCGGAGGGTGCGAGACACCGGTAGTAGGACTAGACTCTCTCTATAATAGACACGTTTTAAAACCTTGAGAGAAAGTCCGGATTGGAAAGTCTAAAGAGGACAATATTTGTTAGCAGTGGGCTTAAGCTATTACAAATGGTATCAGAGCCCGACACCGGGGGTGTGCCAGCGAGAACGCTGGCCCCCAAAAGGTGACGGATTGTGAGATCCCACATTGGTTGAAAAGGGAAACGAAACATTCCTTAGAAGGGTGTGGAAAATTCTCCTTAGTAGACGCGTTTAAAAACCTTGAGCCGAAACCCATAAACGAAAGCCTGGGCTCAGACTCGGGCTCGGCTGTTACAATAAATCTTTCAAATCGTCAAATTTTCAGGCCAACCACTCATTGATGACCAACAATATTTCCCAAGAACAAGCATCAATAAACCATTCAAACAAGCCCAAAAGGACCTGAACTCATCAAGGCTAGATCAAGACTATGAAGATGATGAACCACTAGCCTCTATATCTGAGATCTTCCCTGGCTTCCTTGCCATTGGAACCCTAGGCTCATCAGACCCAGCAACCCCAAAATTCTCCATCTCCATTGACTACATAACTGAAACAGAAACCGAAGTCACAGAGAATGAACTGAAGCTCATCAGCGAAGAGCTAGAGAAGGTGCTCGATGCCGAGGCAAAAGACGACACCGGGTCAAGACGAAACAGCCACGGGAGCACTGTCAATTCCAACAGTAAAGTATTGGAAGGACCTGAGAACAATGGCAGCACTGCCATTTGCCCGCTTCAAGGGTATTTGTTCGGGTCATCGGTCGAGTTTTCGGAAACGACAACGGTGGCAAAGAAGGAGAATCGAACGTCGCTCGGAGAGCTGTTTCAGAAAAGCAAACCATCAGAGGATGAGAAGGATGATCAAAAGCAAGTAGAGAAGAAAGGGGATAATAAGCTGTATGGGATTCAATTGATCAAAAGAAAGCTGAAGAAAAAGATGCATAATCCAACAGCTTCTGGTGATGTCTTAACTGTTTCAACTGATCAAACCAAACTCTCCAAGGTATGCATCAAATTAAAACATTCGGGTCGATTTAAAGTTCATAAACTTCGATCGAATTGTTTGATCTTTCTCGTTCTAAAGCGTTTGCAATCGCTCGTAGATTCGTAATTTGTTCAATAGAAAGGTTTATCCTGAGATCACTACAATGGAGAAAGAAAAGTGGGATCAAAAGGCCCAAAAGAATGACAAAAAGAAGAAGGCAGCCATTGATGGAGTTCATAAGAACAATGGAGATAGAGGGTCCATCATGATCTTTCCAAAAAAGCTCATTTTCAAGCAACCCAGCACCCACTCAGATGATGATCATGATGATTGGAACAAGGAGCAATGGATCAAAACTGATGCAGACTGTAAGTGAATGTATCTATCTTTATTTCCGGCTTATCCAAATAAATTTCAAATTATCGGTTTAGTCTCTAAGTTTGAATTTCGTGTATTTTCTTAAACGTTCAAGTATTGTCTCTGTGTTTTGATTAAAGTTTAATAGACATCCGTTTGTTTGTGAGAGAAATAAAATTTCCTACCTATTAAGTTGTTTATAGATACCTCCGAG CCTCAAGCTCTCCTTTCAAGAAATCTTCTCCACACAAACACAAGATGAAGTTATTAGGATGGATGCATCGCAAGTTCAGGCAAAACAGCGGCGATCCCCACAAAGATTTTGTCATTGGCCAACCACTCATTGATGACCAACAATATTTCCCAAGAACAAGCATCAATAAACCATTCAAACAAGCCCAAAAGGACCTGAACTCATCAAGGCTAGATCAAGACTATGAAGATGATGAACCACTAGCCTCTATATCTGAGATCTTCCCTGGCTTCCTTGCCATTGGAACCCTAGGCTCATCAGACCCAGCAACCCCAAAATTCTCCATCTCCATTGACTACATAACTGAAACAGAAACCGAAGTCACAGAGAATGAACTGAAGCTCATCAGCGAAGAGCTAGAGAAGGTGCTCGATGCCGAGGCAAAAGACGACACCGGGTCAAGACGAAACAGCCACGGGAGCACTGTCAATTCCAACAGTAAAGTATTGGAAGGACCTGAGAACAATGGCAGCACTGCCATTTGCCCGCTTCAAGGGTATTTGTTCGGGTCATCGGTCGAGTTTTCGGAAACGACAACGGTGGCAAAGAAGGAGAATCGAACGTCGCTCGGAGAGCTGTTTCAGAAAAGCAAACCATCAGAGGATGAGAAGGATGATCAAAAGCAAGTAGAGAAGAAAGGGGATAATAAGCTGTATGGGATTCAATTGATCAAAAGAAAGCTGAAGAAAAAGATGCATAATCCAACAGCTTCTGGTGATGTCTTAACTGTTTCAACTGATCAAACCAAACTCTCCAAGATTCGTAATTTGTTCAATAGAAAGGTTTATCCTGAGATCACTACAATGGAGAAAGAAAAGTGGGATCAAAAGGCCCAAAAGAATGACAAAAAGAAGAAGGCAGCCATTGATGGAGTTCATAAGAACAATGGAGATAGAGGGTCCATCATGATCTTTCCAAAAAAGCTCATTTTCAAGCAACCCAGCACCCACTCAGATGATGATCATGATGATTGGAACAAGGAGCAATGGATCAAAACTGATGCAGACTGTAAGTGAATGTATCTATCTTTATTTCCGGCTTATCCAAATAAATTTCAAATTATCGGTTTAGTCTCTAAGTTTGAATTTCGTGTATTTTCTTAAACGTTCAAGTATTGTCTCTGTGTTTTGATTAAAGTTTAATAGACATCCGTTTGTTTGTGAGAGAAATAAAATTTCCTACCTATTAAGTTGTTTATAGATACCTCCGAG ATGAAGTTATTAGGATGGATGCATCGCAAGTTCAGGCAAAACAGCGGCGATCCCCACAAAGATTTTGTCATTGGCCAACCACTCATTGATGACCAACAATATTTCCCAAGAACAAGCATCAATAAACCATTCAAACAAGCCCAAAAGGACCTGAACTCATCAAGGCTAGATCAAGACTATGAAGATGATGAACCACTAGCCTCTATATCTGAGATCTTCCCTGGCTTCCTTGCCATTGGAACCCTAGGCTCATCAGACCCAGCAACCCCAAAATTCTCCATCTCCATTGACTACATAACTGAAACAGAAACCGAAGTCACAGAGAATGAACTGAAGCTCATCAGCGAAGAGCTAGAGAAGGTGCTCGATGCCGAGGCAAAAGACGACACCGGGTCAAGACGAAACAGCCACGGGAGCACTGTCAATTCCAACAGTAAAGTATTGGAAGGACCTGAGAACAATGGCAGCACTGCCATTTGCCCGCTTCAAGGGTATTTGTTCGGGTCATCGGTCGAGTTTTCGGAAACGACAACGGTGGCAAAGAAGGAGAATCGAACGTCGCTCGGAGAGCTGTTTCAGAAAAGCAAACCATCAGAGGATGAGAAGGATGATCAAAAGCAAGTAGAGAAGAAAGGGGATAATAAGCTGTATGGGATTCAATTGATCAAAAGAAAGCTGAAGAAAAAGATGCATAATCCAACAGCTTCTGGTGATGTCTTAACTGTTTCAACTGATCAAACCAAACTCTCCAAGATTCGTAATTTGTTCAATAGAAAGGTTTATCCTGAGATCACTACAATGGAGAAAGAAAAGTGGGATCAAAAGGCCCAAAAGAATGACAAAAAGAAGAAGGCAGCCATTGATGGAGTTCATAAGAACAATGGAGATAGAGGGTCCATCATGATCTTTCCAAAAAAGCTCATTTTCAAGCAACCCAGCACCCACTCAGATGATGATCATGATGATTGGAACAAGGAGCAATGGATCAAAACTGATGCAGACTGTAAGTGA
BLAST of CmoCh06G016650 vs. TrEMBL
Match: A0A0A0KXC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G012380 PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 1.5e-89 Identity = 223/383 (58.22%), Postives = 267/383 (69.71%), Query Frame = 1
BLAST of CmoCh06G016650 vs. TrEMBL
Match: M5XRW0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007017mg PE=4 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.5e-73 Identity = 184/387 (47.55%), Postives = 252/387 (65.12%), Query Frame = 1
BLAST of CmoCh06G016650 vs. TrEMBL
Match: A0A061E414_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008615 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 7.5e-73 Identity = 178/392 (45.41%), Postives = 252/392 (64.29%), Query Frame = 1
BLAST of CmoCh06G016650 vs. TrEMBL
Match: F6HGC9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03960 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 6.4e-72 Identity = 180/382 (47.12%), Postives = 243/382 (63.61%), Query Frame = 1
BLAST of CmoCh06G016650 vs. TrEMBL
Match: A5BC57_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014980 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.9e-71 Identity = 179/382 (46.86%), Postives = 243/382 (63.61%), Query Frame = 1
BLAST of CmoCh06G016650 vs. TAIR10
Match: AT5G14090.1 (AT5G14090.1 unknown protein) HSP 1 Score: 135.2 bits (339), Expect = 7.5e-32 Identity = 121/367 (32.97%), Postives = 185/367 (50.41%), Query Frame = 1
BLAST of CmoCh06G016650 vs. TAIR10
Match: AT3G27025.1 (AT3G27025.1 unknown protein) HSP 1 Score: 55.5 bits (132), Expect = 7.6e-08 Identity = 91/342 (26.61%), Postives = 145/342 (42.40%), Query Frame = 1
BLAST of CmoCh06G016650 vs. NCBI nr
Match: gi|778689949|ref|XP_011653042.1| (PREDICTED: uncharacterized protein LOC105435167 [Cucumis sativus]) HSP 1 Score: 337.8 bits (865), Expect = 2.2e-89 Identity = 223/383 (58.22%), Postives = 267/383 (69.71%), Query Frame = 1
BLAST of CmoCh06G016650 vs. NCBI nr
Match: gi|659108095|ref|XP_008454016.1| (PREDICTED: uncharacterized protein LOC103494565 [Cucumis melo]) HSP 1 Score: 335.9 bits (860), Expect = 8.2e-89 Identity = 221/383 (57.70%), Postives = 266/383 (69.45%), Query Frame = 1
BLAST of CmoCh06G016650 vs. NCBI nr
Match: gi|1009152820|ref|XP_015894303.1| (PREDICTED: uncharacterized protein LOC107428299 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 288.5 bits (737), Expect = 1.5e-74 Identity = 181/384 (47.14%), Postives = 250/384 (65.10%), Query Frame = 1
BLAST of CmoCh06G016650 vs. NCBI nr
Match: gi|596170408|ref|XP_007223089.1| (hypothetical protein PRUPE_ppa007017mg [Prunus persica]) HSP 1 Score: 284.6 bits (727), Expect = 2.2e-73 Identity = 184/387 (47.55%), Postives = 252/387 (65.12%), Query Frame = 1
BLAST of CmoCh06G016650 vs. NCBI nr
Match: gi|590691921|ref|XP_007043918.1| (Uncharacterized protein TCM_008615 [Theobroma cacao]) HSP 1 Score: 282.3 bits (721), Expect = 1.1e-72 Identity = 178/392 (45.41%), Postives = 252/392 (64.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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