CmoCh06G016590 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G016590
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRho GDP-dissociation inhibitor-like protein
LocationCmo_Chr06 : 11503940 .. 11505453 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTATACTTCTGGTGGCCTAAAACTCTCTCTTCTTTCTTCATATATTTTACAATGTCAGCTGTGGTTGGTTCTCTCTCAACCAAGAACGTTAAGTTCAACCCTCAAGTAGGGGAGGAAGAGCTCAGTAAGTCTATGAACGATCGAGAAGGAGAAGAGATTATTGAAGACGACGAAGACGACAAACTTAAGCCTGAGGGAGAAGTCGATCTCGGTCCTCGGTTCTCTATCAAGGAACAACTCGAGAAAGATAAGGTAAGTTCGTAAGATTGAGTTTGATATGACTTTTTAACAATACTTTTGTTGATCCATCATAGCTTTGGTTTTGTTTGTCTAGGATGATGAAAGCTTGAGAAAATGGAAGGAACAGTTGTTGGGTAGTGTTGATCTCTCTGCCATTGGAGGTGAACATGAATTTCTTCTTTGTGTTGATGCTATTTAATTCAACCATATCTATTCGAACGGATCTCTGAAGTGGATTCCTTGAATTCTTATAGATATTACCAACATATCTGAACGATATCATTATTGAAATCACTGACCATATATCTGATATTGATCATAATTTATAAGAACATTTTATAGTCAAAGTAAGGTTGAGACGGGTTAAAGGTTTACTCGACATCACGTATCCCGAGAAAGCCTACCCGCTGTTGACTTAAGATATGATCAAAGGATGAATGATGTGTTTTGGTGAAGCAGAAAGCAAAGAAGCAGAAGTGAAAATCCAGAGCCTAACAATCCAATGTCAAGGGCGAGCAGATCTTGTGCTGCCATTGCCATTTACCAAAACTTCCAAGAGCAACAGCCTCTTCGCCATCAAGGAAGGCTCCCGATACCGACTCCGGTTCAGTTTTATCGTCGTTGGGAACATCGTCTCTGGTCTCAAGTACACGAACACTGTCTGGAAGACTGGCGTGAGAGGTTTGTTTCCATATAAGTTGAAAAAGTTGGGAACTTTTTACATCTGTTTTTGTTTGATGGGTTGAATTTTGTTTTGACAGTGGATCATACCAAGAAAATGCTGGGAACATTCAGTCCTCAAAAGGATCCATATGTGTATGAAATGGAAGAAGAAGTCACACCGTCTGGAATGTTTGCGAGAGGCTCTTATTCTGCAAGAACAAAGGTAAAAATCCAGACAAAAAACATTCGTACATTTTAAAACACAGCAGTAAATCAGCATAGTTTTCTGAGGACAAAATTGATCAAACTGTTCTTGATTGTTCTTGTTTTGTCCCAGTTTGTGGATGATGATGGGAAGTGCTTCTTGGATGTGAGCTACCACTTTGAAATCCAAAAGAATTGGGCAACACCCTCTTGAGATATTGTTGCAGAGGGAGAAGCTTTGGGTTTGGATAATGCTTCAATTGAAAGGCTCAACTTATTGTGTGGCTTTTTGCTGTAATCCAATAGGGATTTGTGTATCACTTTTGTTCATTCAATATATATTTTAGCCGACGAACTTACCTTTCGGTATCGGTGCATACACATTGGTTACTTCAATCAATATCT

mRNA sequence

ATCTATACTTCTGGTGGCCTAAAACTCTCTCTTCTTTCTTCATATATTTTACAATGTCAGCTGTGGTTGGTTCTCTCTCAACCAAGAACGTTAAGTTCAACCCTCAAGTAGGGGAGGAAGAGCTCAGTAAGTCTATGAACGATCGAGAAGGAGAAGAGATTATTGAAGACGACGAAGACGACAAACTTAAGCCTGAGGGAGAAGTCGATCTCGGTCCTCGGTTCTCTATCAAGGAACAACTCGAGAAAGATAAGGATGATGAAAGCTTGAGAAAATGGAAGGAACAGTTGTTGGGTAGTGTTGATCTCTCTGCCATTGGAGAAAGCAAAGAAGCAGAAGTGAAAATCCAGAGCCTAACAATCCAATGTCAAGGGCGAGCAGATCTTGTGCTGCCATTGCCATTTACCAAAACTTCCAAGAGCAACAGCCTCTTCGCCATCAAGGAAGGCTCCCGATACCGACTCCGGTTCAGTTTTATCGTCGTTGGGAACATCGTCTCTGGTCTCAAGTACACGAACACTGTCTGGAAGACTGGCGTGAGAGTGGATCATACCAAGAAAATGCTGGGAACATTCAGTCCTCAAAAGGATCCATATGTGTATGAAATGGAAGAAGAAGTCACACCGTCTGGAATGTTTGCGAGAGGCTCTTATTCTGCAAGAACAAAGTTTGTGGATGATGATGGGAAGTGCTTCTTGGATGTGAGCTACCACTTTGAAATCCAAAAGAATTGGGCAACACCCTCTTGAGATATTGTTGCAGAGGGAGAAGCTTTGGGTTTGGATAATGCTTCAATTGAAAGGCTCAACTTATTGTGTGGCTTTTTGCTGTAATCCAATAGGGATTTGTGTATCACTTTTGTTCATTCAATATATATTTTAGCCGACGAACTTACCTTTCGGTATCGGTGCATACACATTGGTTACTTCAATCAATATCT

Coding sequence (CDS)

ATGTCAGCTGTGGTTGGTTCTCTCTCAACCAAGAACGTTAAGTTCAACCCTCAAGTAGGGGAGGAAGAGCTCAGTAAGTCTATGAACGATCGAGAAGGAGAAGAGATTATTGAAGACGACGAAGACGACAAACTTAAGCCTGAGGGAGAAGTCGATCTCGGTCCTCGGTTCTCTATCAAGGAACAACTCGAGAAAGATAAGGATGATGAAAGCTTGAGAAAATGGAAGGAACAGTTGTTGGGTAGTGTTGATCTCTCTGCCATTGGAGAAAGCAAAGAAGCAGAAGTGAAAATCCAGAGCCTAACAATCCAATGTCAAGGGCGAGCAGATCTTGTGCTGCCATTGCCATTTACCAAAACTTCCAAGAGCAACAGCCTCTTCGCCATCAAGGAAGGCTCCCGATACCGACTCCGGTTCAGTTTTATCGTCGTTGGGAACATCGTCTCTGGTCTCAAGTACACGAACACTGTCTGGAAGACTGGCGTGAGAGTGGATCATACCAAGAAAATGCTGGGAACATTCAGTCCTCAAAAGGATCCATATGTGTATGAAATGGAAGAAGAAGTCACACCGTCTGGAATGTTTGCGAGAGGCTCTTATTCTGCAAGAACAAAGTTTGTGGATGATGATGGGAAGTGCTTCTTGGATGTGAGCTACCACTTTGAAATCCAAAAGAATTGGGCAACACCCTCTTGA
Homology
[Close]
BLAST of CmoCh06G016590 vs. Swiss-Prot
Match: GDIR_ARATH (Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana GN=GDI1 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-60
Identity = 121/217 (55.76%), Postives = 159/217 (73.27%), Query Frame = 1 

Query: 11  KNVKFNPQVGEEELSKSMNDREGEEIIEDDEDDKLKPEGEVDLGPRFSIKEQLEKDKDDE 70
           +N     +  ++ LS+ M++       E+++DD      ++ LGP+++IKE LEKDKDDE
Sbjct: 27  ENSSSRTRADDDALSRQMSESSLCATEEEEDDDS-----KLQLGPQYTIKEHLEKDKDDE 86

Query: 71  SLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCQGRADLVLPLPFTKTSKSNSLFAIK 130
           SLRKWKEQLLGSVD++ IGE+ + EV+I SL I   GR D+VL +P     K    F +K
Sbjct: 87  SLRKWKEQLLGSVDVTNIGETLDPEVRIDSLAIISPGRPDIVLLVPENGNPKG-MWFTLK 146

Query: 131 EGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQKDPYVYEMEEEVT 190
           EGS+Y L+F+F V  NIVSGL+YTNTVWKTGV+VD  K+MLGTFSPQ +PY + M EE T
Sbjct: 147 EGSKYNLKFTFHVNNNIVSGLRYTNTVWKTGVKVDRAKEMLGTFSPQLEPYNHVMPEETT 206

Query: 191 PSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKNW 228
           PSGMFARGSYSARTKF+DDD KC+L+++Y F+I+K W
Sbjct: 207 PSGMFARGSYSARTKFLDDDNKCYLEINYSFDIRKEW 237

[Close]
BLAST of CmoCh06G016590 vs. Swiss-Prot
Match: GDIR2_HUMAN (Rho GDP-dissociation inhibitor 2 OS=Homo sapiens GN=ARHGDIB PE=1 SV=3)

HSP 1 Score: 120.2 bits (300), Expect = 3.0e-26
Identity = 71/201 (35.32%), Postives = 110/201 (54.73%), Query Frame = 1 

Query: 28  MNDREGEEIIEDDEDDKLKPEGEVDLGPRFSIKEQLEKDKDDESLRKWKEQLLGSVDLSA 87
           M ++  E  +E+D+DD+L  +      P+ S+KE  E DKDDESL K+K+ LLG  D   
Sbjct: 1   MTEKAPEPHVEEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLG--DGPV 60

Query: 88  IGESKEAEVKIQSLTIQCQGR-ADLVLPLPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGN 147
           + + K   V +  LT+ C+     + + L     +       +KEGS YR++  F V  +
Sbjct: 61  VTDPKAPNVVVTRLTLVCESAPGPITMDLTGDLEALKKETIVLKEGSEYRVKIHFKVNRD 120

Query: 148 IVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQKDPYVYEMEEEVTPSGMFARGSYSARTKF 207
           IVSGLKY    ++TGV+VD    M+G++ P+ + Y +    E  P GM ARG+Y  ++ F
Sbjct: 121 IVSGLKYVQHTYRTGVKVDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNKSFF 180

Query: 208 VDDDGKCFLDVSYHFEIQKNW 228
            DDD +  L   ++  I+K W
Sbjct: 181 TDDDKQDHLSWEWNLSIKKEW 199

[Close]
BLAST of CmoCh06G016590 vs. Swiss-Prot
Match: GDIR1_HUMAN (Rho GDP-dissociation inhibitor 1 OS=Homo sapiens GN=ARHGDIA PE=1 SV=3)

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-25
Identity = 77/210 (36.67%), Postives = 110/210 (52.38%), Query Frame = 1 

Query: 19  VGEEELSKSMNDREGEEIIEDDEDDKLKPEGEVDLGPRFSIKEQLEKDKDDESLRKWKEQ 78
           + E+E +     +   E  ED+     KP  +       SI+E  E DKDDESLRK+KE 
Sbjct: 1   MAEQEPTAEQLAQIAAENEEDEHSVNYKPPAQK------SIQEIQELDKDDESLRKYKEA 60

Query: 79  LLGSVDLSAIGESKEAEVKIQSLTIQCQGR-ADLVLPLPFTKTSKSNSLFAIKEGSRYRL 138
           LLG V +SA  +     V +  LT+ C      L L L     S     F +KEG  YR+
Sbjct: 61  LLGRVAVSA--DPNVPNVVVTGLTLVCSSAPGPLELDLTGDLESFKKQSFVLKEGVEYRI 120

Query: 139 RFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQKDPYVYEMEEEVTPSGMFAR 198
           + SF V   IVSG+KY    ++ GV++D T  M+G++ P+ + Y +    E  P GM AR
Sbjct: 121 KISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLAR 180

Query: 199 GSYSARTKFVDDDGKCFLDVSYHFEIQKNW 228
           GSYS +++F DDD    L   ++  I+K+W
Sbjct: 181 GSYSIKSRFTDDDKTDHLSWEWNLTIKKDW 202

[Close]
BLAST of CmoCh06G016590 vs. Swiss-Prot
Match: GDIR1_MACFA (Rho GDP-dissociation inhibitor 1 OS=Macaca fascicularis GN=ARHGDIA PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-25
Identity = 77/210 (36.67%), Postives = 110/210 (52.38%), Query Frame = 1 

Query: 19  VGEEELSKSMNDREGEEIIEDDEDDKLKPEGEVDLGPRFSIKEQLEKDKDDESLRKWKEQ 78
           + E+E +     +   E  ED+     KP  +       SI+E  E DKDDESLRK+KE 
Sbjct: 1   MAEQEPTAEQLAQIAAENEEDEHSVNYKPPAQK------SIQEIQELDKDDESLRKYKEA 60

Query: 79  LLGSVDLSAIGESKEAEVKIQSLTIQCQGR-ADLVLPLPFTKTSKSNSLFAIKEGSRYRL 138
           LLG V +SA  +     V +  LT+ C      L L L     S     F +KEG  YR+
Sbjct: 61  LLGRVAVSA--DPNVPNVVVTGLTLVCSSAPGPLELDLTGDLESFKKQSFVLKEGVEYRI 120

Query: 139 RFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQKDPYVYEMEEEVTPSGMFAR 198
           + SF V   IVSG+KY    ++ GV++D T  M+G++ P+ + Y +    E  P GM AR
Sbjct: 121 KISFRVNREIVSGMKYIQHTYRKGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLAR 180

Query: 199 GSYSARTKFVDDDGKCFLDVSYHFEIQKNW 228
           GSYS +++F DDD    L   ++  I+K+W
Sbjct: 181 GSYSIKSRFTDDDKTDHLSWEWNLTIKKDW 202

[Close]
BLAST of CmoCh06G016590 vs. Swiss-Prot
Match: GDIR1_DICDI (Putative rho GDP-dissociation inhibitor 1 OS=Dictyostelium discoideum GN=rdiA PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.8e-25
Identity = 65/179 (36.31%), Postives = 102/179 (56.98%), Query Frame = 1 

Query: 54  GPRFSIKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCQGRADLVL 113
           G   S+ +  ++D +DE+L+++KE LLG+   +   + ++  +K   + IQ +GR D + 
Sbjct: 17  GKHVSVDQLKQQDAEDEALKRYKESLLGTGVHAPKDDPRKLVIK--EMKIQIEGRPDTIY 76

Query: 114 PLPFTKTSKSNSL--FAIKEGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKML 173
           PL   +  K      F +KE   Y++  +F +  +IVSGLK TNTV++ G++V   K ML
Sbjct: 77  PLDTKELIKEMKTKPFVLKESCHYKITLTFNIQHDIVSGLKQTNTVYRKGIKVSTEKHML 136

Query: 174 GTFSPQKDPYVYEMEE---EVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKNW 228
           G+F+PQ   +         E  PSGM ARGSY+A+  F DDD +  L V Y F I+ +W
Sbjct: 137 GSFAPQALAHSVTNPRHGWEEAPSGMLARGSYTAKVVFTDDDNEEHLSVEYAFSIKSDW 193

[Close]
BLAST of CmoCh06G016590 vs. TrEMBL
Match: A0A0A0KU57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G012490 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 5.9e-101
Identity = 195/232 (84.05%), Postives = 212/232 (91.38%), Query Frame = 1 

Query: 1   MSAVVGSLSTK-NVKFNPQVGEEELSKSMNDREGEEIIEDDEDDKLKPEGEV-DLGPRFS 60
           MS VVGSLSTK NVKFNPQV EE+L  ++ DRE E+IIE+DE++KLK E E+ DLGP FS
Sbjct: 1   MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS 60

Query: 61  IKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCQGRADLVLPLPFT 120
           +KEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKI SLTIQC GR DLVLPLPFT
Sbjct: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT 120

Query: 121 KTSKSNS-LFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQ 180
           KTSK++S LFA+KEGSRYRL FSF+V GNIVSGLKYTNTVWKTGVRVD++KKMLGTFSPQ
Sbjct: 121 KTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSPQ 180

Query: 181 KDPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKNWAT 230
           K+PYVYEMEEE TPSGMFARGSYSARTKFVDDDGKC+LDVSYHFEIQK W T
Sbjct: 181 KEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPT 232

[Close]
BLAST of CmoCh06G016590 vs. TrEMBL
Match: G7LHB3_MEDTR (Rho GDP-dissociation inhibitor-like protein OS=Medicago truncatula GN=MTR_8g097200 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.7e-82
Identity = 161/236 (68.22%), Postives = 194/236 (82.20%), Query Frame = 1 

Query: 1   MSAVVGSLST-KNVKFNPQVGEEELSKSMND-----REGEEIIEDDEDDKLKPEGEVDLG 60
           MSA VG++ST K+V FN  + EE  +K  N       E EEI+ D ED++ +P+ E+DLG
Sbjct: 1   MSAAVGAVSTTKDVSFNAHLEEEHKNKGTNKVGVNYDEAEEIVPD-EDEEEEPKLELDLG 60

Query: 61  PRFSIKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCQGRADLVLP 120
           P+FS+KEQLEKDKDDESLRKWKEQLLG+VD+SA+GE  E EVKI SLTI CQGR DL+LP
Sbjct: 61  PQFSLKEQLEKDKDDESLRKWKEQLLGNVDVSAVGEKIEPEVKIVSLTIICQGRPDLILP 120

Query: 121 LPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTF 180
           +PFT  SK  S+F +KEGS+YRL+FSF V  NIVSGL+YTN VWKTGVRV++TKKMLGT+
Sbjct: 121 IPFTADSKK-SMFTLKEGSQYRLKFSFTVSNNIVSGLRYTNVVWKTGVRVENTKKMLGTY 180

Query: 181 SPQKDPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKNWATP 231
           SPQ++PY YE+EEE+TPSG+FARG+YSARTKFVDDD KC+LD SY FEIQKNW TP
Sbjct: 181 SPQQEPYTYELEEEITPSGLFARGTYSARTKFVDDDRKCYLDASYRFEIQKNWPTP 234

[Close]
BLAST of CmoCh06G016590 vs. TrEMBL
Match: I1K3P3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G149100 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.4e-78
Identity = 154/238 (64.71%), Postives = 187/238 (78.57%), Query Frame = 1 

Query: 1   MSAVVGSLSTKNVKFNPQVGEEELSKSMNDREGE--------EIIEDDEDDKLKPEGEVD 60
           MSA V +  TK+V FN  + E+  +K  N   GE        +    D + +  P+ E+D
Sbjct: 1   MSAAVSA--TKDVPFNAHLEEDIKNKGSNKVVGEADRLPYNDDAEGTDSETEEDPKLELD 60

Query: 61  LGPRFSIKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCQGRADLV 120
           LGP+FS++EQLEKDKDDESLRKWKEQLLG +D+SA+GE+KE EVKI SLTI C GR DL+
Sbjct: 61  LGPQFSLREQLEKDKDDESLRKWKEQLLGGIDVSAVGENKEPEVKIVSLTIICPGRPDLI 120

Query: 121 LPLPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLG 180
           LP+PFT  SK NS+F +KEGS+YRL+FSF V  NIVSGLKYTN VWKTG+RVD+TKKMLG
Sbjct: 121 LPIPFTSESK-NSIFTLKEGSQYRLKFSFTVSNNIVSGLKYTNVVWKTGLRVDNTKKMLG 180

Query: 181 TFSPQKDPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKNWATP 231
           T+SP ++PY YE+EEE TPSG+FARG+YSARTKFVDDD KC+LD SYHFEIQKNW+TP
Sbjct: 181 TYSPSQEPYTYELEEETTPSGLFARGTYSARTKFVDDDHKCYLDTSYHFEIQKNWSTP 235

[Close]
BLAST of CmoCh06G016590 vs. TrEMBL
Match: A0A0S3R1I4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G207100 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.1e-78
Identity = 158/245 (64.49%), Postives = 191/245 (77.96%), Query Frame = 1 

Query: 1   MSAVVGSLSTKNVKFNPQVGEEELSKSMN--------------DREGEEIIEDDEDDKLK 60
           MSA V +  TK+V FN Q+ E+  +K  N              D EG E  E +ED KLK
Sbjct: 1   MSAAVSA--TKDVPFNSQLEEDLKNKGTNNKVVGEADRVPYTEDAEGTES-EAEEDPKLK 60

Query: 61  PEGEVDLGPRFSIKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCQ 120
               +DLGPRFS+KEQ+EKDKDDESLRKWKEQLLGS+D+SA+GE+KE EVKI SLTI C 
Sbjct: 61  ----LDLGPRFSLKEQIEKDKDDESLRKWKEQLLGSIDVSAVGENKEPEVKIVSLTIICP 120

Query: 121 GRADLVLPLPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDH 180
           GR +L+LP+PFT  +K  S+F +KEGS+YRL+FSF V  NIVSGLKYTN VWKTGVRVD+
Sbjct: 121 GRPELILPIPFTSDAK-KSIFILKEGSQYRLKFSFTVSNNIVSGLKYTNVVWKTGVRVDN 180

Query: 181 TKKMLGTFSPQKDPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKN 232
           TKKMLGT+SP+++PY YE+EEE TPSG+FARG+YSARTKFVDDD KC+LD +Y+FEIQK+
Sbjct: 181 TKKMLGTYSPRQEPYTYELEEETTPSGLFARGTYSARTKFVDDDRKCYLDTNYYFEIQKS 237

[Close]
BLAST of CmoCh06G016590 vs. TrEMBL
Match: A0A0L9TLS4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g108300 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.1e-78
Identity = 158/245 (64.49%), Postives = 191/245 (77.96%), Query Frame = 1 

Query: 1   MSAVVGSLSTKNVKFNPQVGEEELSKSMN--------------DREGEEIIEDDEDDKLK 60
           MSA V +  TK+V FN Q+ E+  +K  N              D EG E  E +ED KLK
Sbjct: 1   MSAAVSA--TKDVPFNSQLEEDLKNKGTNNKVVGEADRVPYTEDAEGTES-EAEEDPKLK 60

Query: 61  PEGEVDLGPRFSIKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCQ 120
               +DLGPRFS+KEQ+EKDKDDESLRKWKEQLLGS+D+SA+GE+KE EVKI SLTI C 
Sbjct: 61  ----LDLGPRFSLKEQIEKDKDDESLRKWKEQLLGSIDVSAVGENKEPEVKIVSLTIICP 120

Query: 121 GRADLVLPLPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDH 180
           GR +L+LP+PFT  +K  S+F +KEGS+YRL+FSF V  NIVSGLKYTN VWKTGVRVD+
Sbjct: 121 GRPELILPIPFTSDAK-KSIFILKEGSQYRLKFSFTVSNNIVSGLKYTNVVWKTGVRVDN 180

Query: 181 TKKMLGTFSPQKDPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKN 232
           TKKMLGT+SP+++PY YE+EEE TPSG+FARG+YSARTKFVDDD KC+LD +Y+FEIQK+
Sbjct: 181 TKKMLGTYSPRQEPYTYELEEETTPSGLFARGTYSARTKFVDDDRKCYLDTNYYFEIQKS 237

[Close]
BLAST of CmoCh06G016590 vs. TAIR10
Match: AT3G07880.1 (AT3G07880.1 Immunoglobulin E-set superfamily protein)

HSP 1 Score: 234.6 bits (597), Expect = 6.2e-62
Identity = 121/217 (55.76%), Postives = 159/217 (73.27%), Query Frame = 1 

Query: 11  KNVKFNPQVGEEELSKSMNDREGEEIIEDDEDDKLKPEGEVDLGPRFSIKEQLEKDKDDE 70
           +N     +  ++ LS+ M++       E+++DD      ++ LGP+++IKE LEKDKDDE
Sbjct: 27  ENSSSRTRADDDALSRQMSESSLCATEEEEDDDS-----KLQLGPQYTIKEHLEKDKDDE 86

Query: 71  SLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCQGRADLVLPLPFTKTSKSNSLFAIK 130
           SLRKWKEQLLGSVD++ IGE+ + EV+I SL I   GR D+VL +P     K    F +K
Sbjct: 87  SLRKWKEQLLGSVDVTNIGETLDPEVRIDSLAIISPGRPDIVLLVPENGNPKG-MWFTLK 146

Query: 131 EGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQKDPYVYEMEEEVT 190
           EGS+Y L+F+F V  NIVSGL+YTNTVWKTGV+VD  K+MLGTFSPQ +PY + M EE T
Sbjct: 147 EGSKYNLKFTFHVNNNIVSGLRYTNTVWKTGVKVDRAKEMLGTFSPQLEPYNHVMPEETT 206

Query: 191 PSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKNW 228
           PSGMFARGSYSARTKF+DDD KC+L+++Y F+I+K W
Sbjct: 207 PSGMFARGSYSARTKFLDDDNKCYLEINYSFDIRKEW 237

[Close]
BLAST of CmoCh06G016590 vs. TAIR10
Match: AT1G62450.1 (AT1G62450.1 Immunoglobulin E-set superfamily protein)

HSP 1 Score: 226.1 bits (575), Expect = 2.2e-59
Identity = 114/191 (59.69%), Postives = 146/191 (76.44%), Query Frame = 1 

Query: 38  EDDEDDKLKPEGEVDLGPRFSIKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVK 97
           EDDE+D+ K   +++LGP  ++KEQLE+DKDDESLR+WKEQLLG VDL  +GE+ +  VK
Sbjct: 35  EDDEEDEDK---KLELGPMIALKEQLERDKDDESLRRWKEQLLGVVDLEDVGETPDPVVK 94

Query: 98  IQSLTIQCQGRADLVLPLPFTKT-SKSNSLFAIKEGSRYRLRFSFIVVGNIVSGLKYTNT 157
           I  LTI+   R ++VL +P     +     F IKEGS+Y L F+F V  NIVSGL+Y NT
Sbjct: 95  ILDLTIRSPDREEMVLTIPEDGLPNPKGPWFTIKEGSKYTLVFNFRVTNNIVSGLRYNNT 154

Query: 158 VWKTGVRVDHTKKMLGTFSPQKDPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLD 217
           VWKTGV+VD TK MLGTFSPQ + Y + M EE+TPSGMFARGSYSARTKF+DDD KC+L+
Sbjct: 155 VWKTGVKVDSTKAMLGTFSPQAESYQHVMPEEMTPSGMFARGSYSARTKFIDDDNKCYLE 214

Query: 218 VSYHFEIQKNW 228
           ++Y F+I+K+W
Sbjct: 215 INYTFDIRKSW 222

[Close]
BLAST of CmoCh06G016590 vs. TAIR10
Match: AT1G12070.1 (AT1G12070.1 Immunoglobulin E-set superfamily protein)

HSP 1 Score: 214.9 bits (546), Expect = 5.1e-56
Identity = 107/208 (51.44%), Postives = 149/208 (71.63%), Query Frame = 1 

Query: 21  EEELSKSMNDREGEEIIEDDEDDKLKPEGEVDLGPRFSIKEQLEKDKDDESLRKWKEQLL 80
           EE   + ++ +     +   +DD+ + + +++LGP  ++KEQLEKDKDDESLR+WKEQLL
Sbjct: 15  EEPKGQGLSRKNSHSSMCPTDDDEEEEDKKLELGPMIALKEQLEKDKDDESLRRWKEQLL 74

Query: 81  GSVDLSAIGESKEAEVKIQSLTIQCQGRADLVLPLPFT-KTSKSNSLFAIKEGSRYRLRF 140
           GSVDL  +GE+ +  VKI +LTI+   R D+VL +P   K +     F +KEGS+Y L F
Sbjct: 75  GSVDLEEVGETPDPLVKILTLTIRSPDREDMVLTIPENGKPASKGPWFTLKEGSKYTLIF 134

Query: 141 SFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQKDPYVYEMEEEVTPSGMFARGS 200
           +F V  NIVSGL+Y+NTVWKTG++V   K+MLGTFSPQ +PY + M EE  PSG+  RGS
Sbjct: 135 TFRVTNNIVSGLQYSNTVWKTGIKVYSRKEMLGTFSPQAEPYTHVMFEETAPSGLLVRGS 194

Query: 201 YSARTKFVDDDGKCFLDVSYHFEIQKNW 228
           YS ++KFVDDD +C+L+ +Y F+I+KNW
Sbjct: 195 YSVKSKFVDDDNQCYLENNYTFDIRKNW 222

[Close]
BLAST of CmoCh06G016590 vs. NCBI nr
Match: gi|449469182|ref|XP_004152300.1| (PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis sativus])

HSP 1 Score: 375.2 bits (962), Expect = 8.4e-101
Identity = 195/232 (84.05%), Postives = 212/232 (91.38%), Query Frame = 1 

Query: 1   MSAVVGSLSTK-NVKFNPQVGEEELSKSMNDREGEEIIEDDEDDKLKPEGEV-DLGPRFS 60
           MS VVGSLSTK NVKFNPQV EE+L  ++ DRE E+IIE+DE++KLK E E+ DLGP FS
Sbjct: 1   MSTVVGSLSTKDNVKFNPQVREEKLGTTIKDREEEKIIEEDEENKLKGEREIMDLGPLFS 60

Query: 61  IKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCQGRADLVLPLPFT 120
           +KEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKI SLTIQC GR DLVLPLPFT
Sbjct: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT 120

Query: 121 KTSKSNS-LFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTFSPQ 180
           KTSK++S LFA+KEGSRYRL FSF+V GNIVSGLKYTNTVWKTGVRVD++KKMLGTFSPQ
Sbjct: 121 KTSKTSSCLFALKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDYSKKMLGTFSPQ 180

Query: 181 KDPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKNWAT 230
           K+PYVYEMEEE TPSGMFARGSYSARTKFVDDDGKC+LDVSYHFEIQK W T
Sbjct: 181 KEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPT 232

[Close]
BLAST of CmoCh06G016590 vs. NCBI nr
Match: gi|659108075|ref|XP_008454005.1| (PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis melo])

HSP 1 Score: 367.9 bits (943), Expect = 1.3e-98
Identity = 194/234 (82.91%), Postives = 210/234 (89.74%), Query Frame = 1 

Query: 1   MSAVVGSLSTKNVKFNPQVGEEELSK-SMNDREGEEIIEDDEDD-KLKPEGEVDLGPRFS 60
           MS  VGSLSTK+VKFNPQV EEEL + +M DRE E+I E++E++ KLK E E+DLGP FS
Sbjct: 1   MSTAVGSLSTKDVKFNPQVREEELGRMTMIDREEEKITEEEEEENKLKGEREMDLGPLFS 60

Query: 61  IKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCQGRADLVLPLPFT 120
           +KEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKI SLTIQC GR DLVLPLPFT
Sbjct: 61  LKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKILSLTIQCPGRQDLVLPLPFT 120

Query: 121 KT-SKSNS--LFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTFS 180
           KT SKS+S  LF +KEGSRYRL FSF+V GNIVSGLKYTNTVWKTGVRVDH+KKMLGTFS
Sbjct: 121 KTASKSSSRCLFTLKEGSRYRLLFSFVVAGNIVSGLKYTNTVWKTGVRVDHSKKMLGTFS 180

Query: 181 PQKDPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKNWAT 230
           PQK+PYVYEMEEE TPSGMFARGSYSARTKFVDDDGKC+LDVSYHFEIQK W T
Sbjct: 181 PQKEPYVYEMEEETTPSGMFARGSYSARTKFVDDDGKCYLDVSYHFEIQKKWPT 234

[Close]
BLAST of CmoCh06G016590 vs. NCBI nr
Match: gi|357520423|ref|XP_003630500.1| (Rho GDP-dissociation inhibitor-like protein [Medicago truncatula])

HSP 1 Score: 313.2 bits (801), Expect = 3.9e-82
Identity = 161/236 (68.22%), Postives = 194/236 (82.20%), Query Frame = 1 

Query: 1   MSAVVGSLST-KNVKFNPQVGEEELSKSMND-----REGEEIIEDDEDDKLKPEGEVDLG 60
           MSA VG++ST K+V FN  + EE  +K  N       E EEI+ D ED++ +P+ E+DLG
Sbjct: 1   MSAAVGAVSTTKDVSFNAHLEEEHKNKGTNKVGVNYDEAEEIVPD-EDEEEEPKLELDLG 60

Query: 61  PRFSIKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCQGRADLVLP 120
           P+FS+KEQLEKDKDDESLRKWKEQLLG+VD+SA+GE  E EVKI SLTI CQGR DL+LP
Sbjct: 61  PQFSLKEQLEKDKDDESLRKWKEQLLGNVDVSAVGEKIEPEVKIVSLTIICQGRPDLILP 120

Query: 121 LPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLGTF 180
           +PFT  SK  S+F +KEGS+YRL+FSF V  NIVSGL+YTN VWKTGVRV++TKKMLGT+
Sbjct: 121 IPFTADSKK-SMFTLKEGSQYRLKFSFTVSNNIVSGLRYTNVVWKTGVRVENTKKMLGTY 180

Query: 181 SPQKDPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKNWATP 231
           SPQ++PY YE+EEE+TPSG+FARG+YSARTKFVDDD KC+LD SY FEIQKNW TP
Sbjct: 181 SPQQEPYTYELEEEITPSGLFARGTYSARTKFVDDDRKCYLDASYRFEIQKNWPTP 234

[Close]
BLAST of CmoCh06G016590 vs. NCBI nr
Match: gi|356512404|ref|XP_003524909.1| (PREDICTED: rho GDP-dissociation inhibitor 1-like [Glycine max])

HSP 1 Score: 300.8 bits (769), Expect = 2.0e-78
Identity = 154/238 (64.71%), Postives = 187/238 (78.57%), Query Frame = 1 

Query: 1   MSAVVGSLSTKNVKFNPQVGEEELSKSMNDREGE--------EIIEDDEDDKLKPEGEVD 60
           MSA V +  TK+V FN  + E+  +K  N   GE        +    D + +  P+ E+D
Sbjct: 1   MSAAVSA--TKDVPFNAHLEEDIKNKGSNKVVGEADRLPYNDDAEGTDSETEEDPKLELD 60

Query: 61  LGPRFSIKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCQGRADLV 120
           LGP+FS++EQLEKDKDDESLRKWKEQLLG +D+SA+GE+KE EVKI SLTI C GR DL+
Sbjct: 61  LGPQFSLREQLEKDKDDESLRKWKEQLLGGIDVSAVGENKEPEVKIVSLTIICPGRPDLI 120

Query: 121 LPLPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDHTKKMLG 180
           LP+PFT  SK NS+F +KEGS+YRL+FSF V  NIVSGLKYTN VWKTG+RVD+TKKMLG
Sbjct: 121 LPIPFTSESK-NSIFTLKEGSQYRLKFSFTVSNNIVSGLKYTNVVWKTGLRVDNTKKMLG 180

Query: 181 TFSPQKDPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKNWATP 231
           T+SP ++PY YE+EEE TPSG+FARG+YSARTKFVDDD KC+LD SYHFEIQKNW+TP
Sbjct: 181 TYSPSQEPYTYELEEETTPSGLFARGTYSARTKFVDDDHKCYLDTSYHFEIQKNWSTP 235

[Close]
BLAST of CmoCh06G016590 vs. NCBI nr
Match: gi|920687545|gb|KOM31528.1| (hypothetical protein LR48_Vigan01g108300 [Vigna angularis])

HSP 1 Score: 299.3 bits (765), Expect = 5.9e-78
Identity = 158/245 (64.49%), Postives = 191/245 (77.96%), Query Frame = 1 

Query: 1   MSAVVGSLSTKNVKFNPQVGEEELSKSMN--------------DREGEEIIEDDEDDKLK 60
           MSA V +  TK+V FN Q+ E+  +K  N              D EG E  E +ED KLK
Sbjct: 1   MSAAVSA--TKDVPFNSQLEEDLKNKGTNNKVVGEADRVPYTEDAEGTES-EAEEDPKLK 60

Query: 61  PEGEVDLGPRFSIKEQLEKDKDDESLRKWKEQLLGSVDLSAIGESKEAEVKIQSLTIQCQ 120
               +DLGPRFS+KEQ+EKDKDDESLRKWKEQLLGS+D+SA+GE+KE EVKI SLTI C 
Sbjct: 61  ----LDLGPRFSLKEQIEKDKDDESLRKWKEQLLGSIDVSAVGENKEPEVKIVSLTIICP 120

Query: 121 GRADLVLPLPFTKTSKSNSLFAIKEGSRYRLRFSFIVVGNIVSGLKYTNTVWKTGVRVDH 180
           GR +L+LP+PFT  +K  S+F +KEGS+YRL+FSF V  NIVSGLKYTN VWKTGVRVD+
Sbjct: 121 GRPELILPIPFTSDAK-KSIFILKEGSQYRLKFSFTVSNNIVSGLKYTNVVWKTGVRVDN 180

Query: 181 TKKMLGTFSPQKDPYVYEMEEEVTPSGMFARGSYSARTKFVDDDGKCFLDVSYHFEIQKN 232
           TKKMLGT+SP+++PY YE+EEE TPSG+FARG+YSARTKFVDDD KC+LD +Y+FEIQK+
Sbjct: 181 TKKMLGTYSPRQEPYTYELEEETTPSGLFARGTYSARTKFVDDDRKCYLDTNYYFEIQKS 237

The following BLAST results are available for this feature:
BLAST of CmoCh06G016590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GDIR_ARATH1.1e-6055.76Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana GN=GDI1 PE=1 SV=1[more]
GDIR2_HUMAN3.0e-2635.32Rho GDP-dissociation inhibitor 2 OS=Homo sapiens GN=ARHGDIB PE=1 SV=3[more]
GDIR1_HUMAN4.4e-2536.67Rho GDP-dissociation inhibitor 1 OS=Homo sapiens GN=ARHGDIA PE=1 SV=3[more]
GDIR1_MACFA4.4e-2536.67Rho GDP-dissociation inhibitor 1 OS=Macaca fascicularis GN=ARHGDIA PE=2 SV=1[more]
GDIR1_DICDI9.8e-2536.31Putative rho GDP-dissociation inhibitor 1 OS=Dictyostelium discoideum GN=rdiA PE... [more]
BLAST of CmoCh06G016590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KU57_CUCSA5.9e-10184.05Uncharacterized protein OS=Cucumis sativus GN=Csa_4G012490 PE=4 SV=1[more]
G7LHB3_MEDTR2.7e-8268.22Rho GDP-dissociation inhibitor-like protein OS=Medicago truncatula GN=MTR_8g0972... [more]
I1K3P3_SOYBN1.4e-7864.71Uncharacterized protein OS=Glycine max GN=GLYMA_05G149100 PE=4 SV=1[more]
A0A0S3R1I4_PHAAN4.1e-7864.49Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G207100 PE=... [more]
A0A0L9TLS4_PHAAN4.1e-7864.49Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g108300 PE=4 SV=1[more]
BLAST of CmoCh06G016590 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07880.16.2e-6255.76 Immunoglobulin E-set superfamily protein[more]
AT1G62450.12.2e-5959.69 Immunoglobulin E-set superfamily protein[more]
AT1G12070.15.1e-5651.44 Immunoglobulin E-set superfamily protein[more]
BLAST of CmoCh06G016590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469182|ref|XP_004152300.1|8.4e-10184.05PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis sativus][more]
gi|659108075|ref|XP_008454005.1|1.3e-9882.91PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis melo][more]
gi|357520423|ref|XP_003630500.1|3.9e-8268.22Rho GDP-dissociation inhibitor-like protein [Medicago truncatula][more]
gi|356512404|ref|XP_003524909.1|2.0e-7864.71PREDICTED: rho GDP-dissociation inhibitor 1-like [Glycine max][more]
gi|920687545|gb|KOM31528.1|5.9e-7864.49hypothetical protein LR48_Vigan01g108300 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000406Rho_GDI
IPR014756Ig_E-set
IPR024792RhoGDI_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005094Rho GDP-dissociation inhibitor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005094 Rho GDP-dissociation inhibitor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G016590.1CmoCh06G016590.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000406Rho protein GDP-dissociation inhibitorPRINTSPR00492RHOGDIcoord: 206..223
score: 9.5E-6coord: 147..163
score: 9.5E-6coord: 164..179
score: 9.
IPR000406Rho protein GDP-dissociation inhibitorPANTHERPTHR10980RHO GDP-DISSOCIATION INHIBITORcoord: 21..230
score: 1.4E
IPR000406Rho protein GDP-dissociation inhibitorPFAMPF02115Rho_GDIcoord: 39..226
score: 1.5
IPR014756Immunoglobulin E-setunknownSSF81296E set domainscoord: 40..227
score: 3.29
IPR024792Rho GDP-dissociation inhibitor domainGENE3DG3DSA:2.70.50.30coord: 51..228
score: 6.4
NoneNo IPR availablePANTHERPTHR10980:SF3LD16419Pcoord: 21..230
score: 1.4E