CmoCh06G016450 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G016450
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description15-cis-zeta-carotene isomerase
LocationCmo_Chr06 : 11445439 .. 11448529 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAAATCCAAATCCTTCTTTGAAGCGCACCAATTTTCACAGATTCTTCTCCACTTTCCATTTCCCCAACCCCCTCAATCCTCATTTTGCCTTCTCCTCCCACTCTCCATTGACAACCACCTCCGATTACAGTGCTCTAATGGCGGTAGCCTCCGCCACGACCCTCTTTTTCCCCCCACTTCCCACCTCTTCTAACCAACCCCACCATCGCCATCGCCGTCTCGATGCTTTTACCCTCCGACCCTCTTCAATTTCCACCCCCAATTTCCTTCCCCAACTTCCCTTTTCCCTCAATTCCTCACCGATTCCCCGCCGTCGTCGATTTTCGGCTGAGGCTTCTATTGGAGACAGCGAGAGTGGCGGTTCGACCTCTACCTCGGATGACGACGGCCTTGTCGGCGAGGACGCTGCTGTTTTTAATCTTTCCGAGCAGAAATTGGCGTCGTGGGCTTATTTCACTGTGATTTTGGGGGTTGTTCTGTTCGTGTTGAATGTTGTTTGGATCGATAATTCTGCTGGGGGTGTTGGGAAGGCCTTCGTGGATGCTATTTCTGGACTTTCGGATAGTCATGAGGTACCCTTCTATATGATTTCTGTAGCTTGATTTCCTTTTTGGAGTATTAGAACATGCTGAAGACTGTATAGGAATACTTCCATTGCTAGATTTGCTGGATTGCAGGACAATATCATTTCGTTGTTCTTTGTCTTTAACATGCTGAAGATTGGTTTTGGTTGAAGCTAATGGGTGTTTATAGCTGGATGAACTGGCTTCCAATTTACTAAATTCCATTGCTAGCTGATGTTTAAATTTGGTGATTTTGGTGTATAAAAGATGAAACTAGAACTTTGGAACAATTGCATAAACCATCCCTAAACTATGGAGTTTGTAACAATCATACCCTTGAACTTTGAAGTGTTGCAATCGATCCGTATACTTTGTTAAGTGTAGCAATCAGCCCTTCCGATTTAACAAGAGACCTTAAGTCAAGAGGCATTCGGGAAGCGACTAGTCACTTCTAGCAACGCTTCTATGAGGCCGACCACTACATAAACAAAGAGATCCTTCAATGATTGCAGCACTAACTACTGGAGTGATTGATCGAACTATAAGTTCAAGAGTGTGATTGGAACGCTTAGCAAAGTTGAAGGGGCGGATTGATCTTAAAAGTTCAAAGGTGTAATGGTAACAAGTCCTATAGTCGAGGGGCGGCTTGTGCGATTTCCCCAAAACTTTTAAGATGAAAATCTTACCATCGACCGGGGAGGACGAACTGAGCATATGTGGTGCATGGCCTTGCTAAATGTCTGAATCTCAGTCTTGGAACTTTGTTATGCAGGTTGTGATGTTGGCCCTCATTTTCATTTTTGCTGTTGTCCACAGTGGTTTGGCTAGTCTCCGAGATCAGGGCGAGAAGCTCGTTGGAGAACGAGCTTTTCGGGTTCTGTTTGCAGGAGTTTCTCTTCCATTGGCTGTCAGCACTGTGGTAGGTTCCTTCCCTCTACTTTTCCCTTTATCTTCTCTGACTGCACACCCCCATATTGACTTGTTTACACTAAGGAGTTGTATTCAGGTGTACTTCATTAACCATCGATACGACGGGGTACAGTTATGGCAGCTCCACAGCATTCCCGGATTGCATCAACTCGTGTGGCTCAGTTCGTTTATCTCCTTCTTCTTCCTATACCCTTCTACTTTTAATCTGCTAGAAGTCGCTGCAGTCGATAAACCGAAAATGCACCTTTGGGAAACAGGCATCATGAGAATAACTAGGCATCCACAGGTATGTTTGTGTTTCATTATCTTGAATGTTCATTGCATTTCATGACAGTATCAGGGTTTCTTTGCGGTTTATTTGATTGCTTCGGCTTGAACCGTTGATGAACGTCGTCATTGGCATGTTAGATAAGTTTTCTTATGTCAAGTATATTCGGTTAGCTGCTGTAAAGAGCTCGAGTATGAAAGCTTAGCGACCAAAATAGAAGTCAAACTAAACTATTTTCCCGTAAAAGTCATGTTTAATCTTACGGAACAAATTCGTTTGAAGATTTGAAACAAGAAGATAGGGAGACGAAATGGATTTAATGTGTAACAGCTCAAGCCTAGTACTAGTAGATATTGTCCTCTTTGCGGTTTCCCTCAAAGTTTTTAAAACACGTCTACTAGGGAGAGGTTTCCACACCCTTTTAAAGAATACTTCGTTCTCCTCCCCAACCGATATGGGATCTCACAATCTACTCCTCTTTGGGGCTCAGCGTCCTCACTGACACTCATTCTCTTCTCCAATCAATGTGGGACCCCTTAATCTAGCGTCCTTGCTGGCACAACCACCCCGTGTCTGGCTTTAATACCATTTGTAGCTGCCTAAGTCCACCGCTAGAAGATATTGTCCTCTTTGGGTTTTCCCTCAAGGTTTTAAAACTCGTCTGTTAGGAAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCTCCTCCTCAACTGACGTGTGATCTCATATGATGATTATCTGTTTCAAGATCGGATGTTGATATTCACGAGGGGAGAGGACAAACACGACCTTTTTATAAACACTGATCATACCAAATCTTGGTTTCTGTTTGAAGATGGTTGGACAGGTGATCTGGTGCCTTGCTCACACAGTCTGGATTGGGAACTCAGTTGCAGTAGCAGCTTCCATTGGGTTGATAGGACATCATCTGTTCGGGGTATGGAACGGGGACAGGAGGCTAGCAAAGCGATACGGGGCAGATTTTGAAGCGGTGAAAAGGCGAACGAGCGTCGTTCCATTTGCTGCCATTCTGGATGGTCGTCAAAAGTTGCCCGACGACTACTACAAGGAGTTCATTCGGTTGCCATATCTATCAATCACTGCACTGACCATAGGTGCCTACCTTGCCCACCCTCTCATGCAAGCTGCAAGCTTCAGGCTTCATTGGTAGACTTTATTTCTATGCAGCCGACTCACTTGTATTAGAACTATACACCACTGTATAAACTAAGGCACCAATGGTAGAGAAATTTGATCCCTTAGTTATAGCCTTATTTATTATATAATTATAAATATAGCAGTTTTAAATGAATAAAACAAGC

mRNA sequence

ACAAAATCCAAATCCTTCTTTGAAGCGCACCAATTTTCACAGATTCTTCTCCACTTTCCATTTCCCCAACCCCCTCAATCCTCATTTTGCCTTCTCCTCCCACTCTCCATTGACAACCACCTCCGATTACAGTGCTCTAATGGCGGTAGCCTCCGCCACGACCCTCTTTTTCCCCCCACTTCCCACCTCTTCTAACCAACCCCACCATCGCCATCGCCGTCTCGATGCTTTTACCCTCCGACCCTCTTCAATTTCCACCCCCAATTTCCTTCCCCAACTTCCCTTTTCCCTCAATTCCTCACCGATTCCCCGCCGTCGTCGATTTTCGGCTGAGGCTTCTATTGGAGACAGCGAGAGTGGCGGTTCGACCTCTACCTCGGATGACGACGGCCTTGTCGGCGAGGACGCTGCTGTTTTTAATCTTTCCGAGCAGAAATTGGCGTCGTGGGCTTATTTCACTGTGATTTTGGGGGTTGTTCTGTTCGTGTTGAATGTTGTTTGGATCGATAATTCTGCTGGGGGTGTTGGGAAGGCCTTCGTGGATGCTATTTCTGGACTTTCGGATAGTCATGAGGTTGTGATGTTGGCCCTCATTTTCATTTTTGCTGTTGTCCACAGTGGTTTGGCTAGTCTCCGAGATCAGGGCGAGAAGCTCGTTGGAGAACGAGCTTTTCGGGTTCTGTTTGCAGGAGTTTCTCTTCCATTGGCTGTCAGCACTGTGGTGTACTTCATTAACCATCGATACGACGGGGTACAGTTATGGCAGCTCCACAGCATTCCCGGATTGCATCAACTCGTGTGGCTCAGTTCGTTTATCTCCTTCTTCTTCCTATACCCTTCTACTTTTAATCTGCTAGAAGTCGCTGCAGTCGATAAACCGAAAATGCACCTTTGGGAAACAGGCATCATGAGAATAACTAGGCATCCACAGATGGTTGGACAGGTGATCTGGTGCCTTGCTCACACAGTCTGGATTGGGAACTCAGTTGCAGTAGCAGCTTCCATTGGGTTGATAGGACATCATCTGTTCGGGGTATGGAACGGGGACAGGAGGCTAGCAAAGCGATACGGGGCAGATTTTGAAGCGGTGAAAAGGCGAACGAGCGTCGTTCCATTTGCTGCCATTCTGGATGGTCGTCAAAAGTTGCCCGACGACTACTACAAGGAGTTCATTCGGTTGCCATATCTATCAATCACTGCACTGACCATAGGTGCCTACCTTGCCCACCCTCTCATGCAAGCTGCAAGCTTCAGGCTTCATTGGTAGACTTTATTTCTATGCAGCCGACTCACTTGTATTAGAACTATACACCACTGTATAAACTAAGGCACCAATGGTAGAGAAATTTGATCCCTTAGTTATAGCCTTATTTATTATATAATTATAAATATAGCAGTTTTAAATGAATAAAACAAGC

Coding sequence (CDS)

ATGGCGGTAGCCTCCGCCACGACCCTCTTTTTCCCCCCACTTCCCACCTCTTCTAACCAACCCCACCATCGCCATCGCCGTCTCGATGCTTTTACCCTCCGACCCTCTTCAATTTCCACCCCCAATTTCCTTCCCCAACTTCCCTTTTCCCTCAATTCCTCACCGATTCCCCGCCGTCGTCGATTTTCGGCTGAGGCTTCTATTGGAGACAGCGAGAGTGGCGGTTCGACCTCTACCTCGGATGACGACGGCCTTGTCGGCGAGGACGCTGCTGTTTTTAATCTTTCCGAGCAGAAATTGGCGTCGTGGGCTTATTTCACTGTGATTTTGGGGGTTGTTCTGTTCGTGTTGAATGTTGTTTGGATCGATAATTCTGCTGGGGGTGTTGGGAAGGCCTTCGTGGATGCTATTTCTGGACTTTCGGATAGTCATGAGGTTGTGATGTTGGCCCTCATTTTCATTTTTGCTGTTGTCCACAGTGGTTTGGCTAGTCTCCGAGATCAGGGCGAGAAGCTCGTTGGAGAACGAGCTTTTCGGGTTCTGTTTGCAGGAGTTTCTCTTCCATTGGCTGTCAGCACTGTGGTGTACTTCATTAACCATCGATACGACGGGGTACAGTTATGGCAGCTCCACAGCATTCCCGGATTGCATCAACTCGTGTGGCTCAGTTCGTTTATCTCCTTCTTCTTCCTATACCCTTCTACTTTTAATCTGCTAGAAGTCGCTGCAGTCGATAAACCGAAAATGCACCTTTGGGAAACAGGCATCATGAGAATAACTAGGCATCCACAGATGGTTGGACAGGTGATCTGGTGCCTTGCTCACACAGTCTGGATTGGGAACTCAGTTGCAGTAGCAGCTTCCATTGGGTTGATAGGACATCATCTGTTCGGGGTATGGAACGGGGACAGGAGGCTAGCAAAGCGATACGGGGCAGATTTTGAAGCGGTGAAAAGGCGAACGAGCGTCGTTCCATTTGCTGCCATTCTGGATGGTCGTCAAAAGTTGCCCGACGACTACTACAAGGAGTTCATTCGGTTGCCATATCTATCAATCACTGCACTGACCATAGGTGCCTACCTTGCCCACCCTCTCATGCAAGCTGCAAGCTTCAGGCTTCATTGGTAG
Homology
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BLAST of CmoCh06G016450 vs. Swiss-Prot
Match: ZCIS_ARATH (15-cis-zeta-carotene isomerase, chloroplastic OS=Arabidopsis thaliana GN=Z-ISO PE=1 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 4.3e-139
Identity = 235/326 (72.09%), Postives = 278/326 (85.28%), Query Frame = 1 

Query: 50  SLNSSPIPRRRRFSAEASIGDSESGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTVI 109
           SL SS  P  R+    +++ + +   S S S    L+GED+A F L +QKL SW YF V+
Sbjct: 43  SLLSSSSPVIRKILVRSTLREDQPIASDSESSPTLLIGEDSAAFELGKQKLVSWVYFGVV 102

Query: 110 LGVVLFVLNVVWIDNSAGGVGKAFVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQG 169
           LGVVLF+LNVVWIDNS G  GK+F+DA+S +S S EV ML LI IFA+VHSGLASLRD G
Sbjct: 103 LGVVLFILNVVWIDNSTG-FGKSFIDAVSNISGSPEVAMLMLILIFAIVHSGLASLRDIG 162

Query: 170 EKLVGERAFRVLFAGVSLPLAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFF 229
           EKL+GERAFRVLFAG+SLPLA+ST+VYFINHRYDG QLWQL  +PG+H+ +W+++F+SFF
Sbjct: 163 EKLIGERAFRVLFAGISLPLAMSTIVYFINHRYDGSQLWQLQGVPGVHEAIWVANFVSFF 222

Query: 230 FLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASI 289
           FLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQ++WCLAHT+WIGN+VA +AS+
Sbjct: 223 FLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQIVWCLAHTLWIGNTVAASASL 282

Query: 290 GLIGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPY 349
           GLI HHLFG WNGDRRLAKRYG DFE++K+RTSV+PFAAI +GRQ LP+DYYKEF+RLPY
Sbjct: 283 GLIAHHLFGAWNGDRRLAKRYGEDFESIKKRTSVIPFAAIFEGRQVLPEDYYKEFVRLPY 342

Query: 350 LSITALTIGAYLAHPLMQAASFRLHW 376
           L+ITALT+GAY AHPLMQ ASFRLHW
Sbjct: 343 LAITALTVGAYFAHPLMQGASFRLHW 367

[Close]
BLAST of CmoCh06G016450 vs. Swiss-Prot
Match: ZCIS_MAIZE (15-cis-zeta-carotene isomerase, chloroplastic OS=Zea mays PE=1 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 2.2e-130
Identity = 224/307 (72.96%), Postives = 258/307 (84.04%), Query Frame = 1 

Query: 69  GDSESGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTVILGVVLFVLNVVWIDNSAGG 128
           GD   GG         LVGED+A F L +Q +ASWAYF  ILG VL  LNV+WID S G 
Sbjct: 68  GDESGGGPV-------LVGEDSAAFELKDQSVASWAYFAGILGAVLVALNVLWIDPSTG- 127

Query: 129 VGKAFVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQGEKLVGERAFRVLFAGVSLP 188
           VG  F+DA++ +SDSHEVVML L  IFAVVHSG+ASLR+ GEK+VGER +RVLFAG+SLP
Sbjct: 128 VGTKFLDAVASVSDSHEVVMLLLTIIFAVVHSGMASLRESGEKIVGERVYRVLFAGISLP 187

Query: 189 LAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFFFLYPSTFNLLEVAAVDKPK 248
           LAV+T+VYFINHRYDG QLWQ+  I G+H+L+W SSFISFFFLYPSTFNLLEVAAVDKPK
Sbjct: 188 LAVTTIVYFINHRYDGTQLWQVQGITGIHELLWFSSFISFFFLYPSTFNLLEVAAVDKPK 247

Query: 249 MHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASIGLIGHHLFGVWNGDRRLAK 308
           +H+WETGIMRITRHPQMVGQVIWCLAHT+WIGNSVAVAAS+GLI HHLFG WNGDRRL  
Sbjct: 248 LHMWETGIMRITRHPQMVGQVIWCLAHTLWIGNSVAVAASVGLISHHLFGAWNGDRRLLS 307

Query: 309 RYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPYLSITALTIGAYLAHPLMQA 368
           RYG  FE +K+RTSV+PFAAI+DGRQKLP DY+KEF RLPY++IT LT+GAY AHPLMQA
Sbjct: 308 RYGEAFEVLKKRTSVMPFAAIIDGRQKLPKDYHKEFFRLPYVAITMLTLGAYFAHPLMQA 366

Query: 369 ASFRLHW 376
           +S++L W
Sbjct: 368 SSYQLPW 366

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BLAST of CmoCh06G016450 vs. TrEMBL
Match: A0A0A0KXF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015720 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 8.4e-182
Identity = 326/375 (86.93%), Postives = 342/375 (91.20%), Query Frame = 1 

Query: 1   MAVASATTLFFPPLPTSSNQPHHRHRRLDAFTLRPSSISTPNFLPQLPFSLNSSPIPRRR 60
           MAVASAT  F PP  +S   P HRHRR DA + RP SISTPN L QLP SLNS  I RR 
Sbjct: 1   MAVASATPPFSPPFLSS---PRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRP 60

Query: 61  RFSAEASIGDSESGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTVILGVVLFVLNVV 120
           R  AEASIGD ESGGSTS SDD+G VGEDAA F+LSEQKL SW YFTVILGVVLFVLNVV
Sbjct: 61  RLVAEASIGDRESGGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVV 120

Query: 121 WIDNSAGGVGKAFVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQGEKLVGERAFRV 180
           WIDNSAGGVGKAF+DA+SG+SDSHEVVML LIFIFA+VHSGLASLRDQGEKLVGERAFRV
Sbjct: 121 WIDNSAGGVGKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRV 180

Query: 181 LFAGVSLPLAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFFFLYPSTFNLLE 240
           LFAGVSLPLAVSTVVYFINHRYDGVQLWQL S+P LHQLVWLSSF+SF FLYPSTFNLLE
Sbjct: 181 LFAGVSLPLAVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLE 240

Query: 241 VAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASIGLIGHHLFGVW 300
           VAAVDKPKMHLWETGI+RITRHPQMVGQVIWCLAHT+WIGNSVAVAASIGLIGHHLFGVW
Sbjct: 241 VAAVDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVW 300

Query: 301 NGDRRLAKRYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPYLSITALTIGAY 360
           NGDRRLAKRYGADFEAVK RTS++PFAAI+DGRQKLPDDYYKEF+RLPYLSITALTIGAY
Sbjct: 301 NGDRRLAKRYGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAY 360

Query: 361 LAHPLMQAASFRLHW 376
           LAHPLMQAASFRLHW
Sbjct: 361 LAHPLMQAASFRLHW 372

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BLAST of CmoCh06G016450 vs. TrEMBL
Match: I1MYD2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G004400 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 2.2e-142
Identity = 266/363 (73.28%), Postives = 294/363 (80.99%), Query Frame = 1 

Query: 18  SNQPHHRHRRLDAFTLRPSSISTPNF-LPQLPFS----LNSSPIPRRRRFSAEASIGDSE 77
           SN  +HR   L A +   +SIS  N  L    FS     NS      R+F A  SIG++E
Sbjct: 15  SNYGYHRRPSLSALSYYSNSISNANLKLSSQCFSNLLRSNSKAPIYCRKFVARTSIGENE 74

Query: 78  SGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTVILGVVLFVLNVVWIDNSAGGVGKA 137
           S   + +  D GLVGED+A F L +QK++SW YFT ILGVVL VLNV WIDNS G  GKA
Sbjct: 75  S--ESESEKDLGLVGEDSAAFELGKQKISSWIYFTAILGVVLCVLNVAWIDNSTG-YGKA 134

Query: 138 FVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVS 197
           F+DA+S LSDSHEVVML LI IFA VHSGLAS R+ GEKL+GER FRV+FAG+SLPLAVS
Sbjct: 135 FIDAVSTLSDSHEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVIFAGISLPLAVS 194

Query: 198 TVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFFFLYPSTFNLLEVAAVDKPKMHLW 257
           TVVYFINHRYDG+QLW L   PGLHQL+WLS+FISFFFLYPSTFNLLEVAAVDKPK+HLW
Sbjct: 195 TVVYFINHRYDGLQLWLLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEVAAVDKPKLHLW 254

Query: 258 ETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGA 317
           ETGI+RITRHPQMVGQVIWCLAHT+WIGNSVAVAASIGLI HHLFGVWNGDRRLA RYG 
Sbjct: 255 ETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWNGDRRLAIRYGE 314

Query: 318 DFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPYLSITALTIGAYLAHPLMQAASFR 376
           DFE VK RTSVVPFAAILDGRQKLP D+YKEFIRLPYL++TALT+GAY AHPLMQ ASF 
Sbjct: 315 DFELVKSRTSVVPFAAILDGRQKLPKDFYKEFIRLPYLTVTALTLGAYFAHPLMQTASFN 374

[Close]
BLAST of CmoCh06G016450 vs. TrEMBL
Match: A0A0B2QW68_GLYSO (15-cis-zeta-carotene isomerase, chloroplastic OS=Glycine soja GN=glysoja_025221 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 2.2e-142
Identity = 266/363 (73.28%), Postives = 294/363 (80.99%), Query Frame = 1 

Query: 18  SNQPHHRHRRLDAFTLRPSSISTPNF-LPQLPFS----LNSSPIPRRRRFSAEASIGDSE 77
           SN  +HR   L A +   +SIS  N  L    FS     NS      R+F A  SIG++E
Sbjct: 15  SNYGYHRRPSLSALSYYSNSISNANLKLSSQCFSNLLRSNSKAPIYCRKFVARTSIGENE 74

Query: 78  SGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTVILGVVLFVLNVVWIDNSAGGVGKA 137
           S   + +  D GLVGED+A F L +QK++SW YFT ILGVVL VLNV WIDNS G  GKA
Sbjct: 75  S--ESESEKDLGLVGEDSAAFELGKQKISSWIYFTAILGVVLCVLNVAWIDNSTG-YGKA 134

Query: 138 FVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVS 197
           F+DA+S LSDSHEVVML LI IFA VHSGLAS R+ GEKL+GER FRV+FAG+SLPLAVS
Sbjct: 135 FIDAVSTLSDSHEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVIFAGISLPLAVS 194

Query: 198 TVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFFFLYPSTFNLLEVAAVDKPKMHLW 257
           TVVYFINHRYDG+QLW L   PGLHQL+WLS+FISFFFLYPSTFNLLEVAAVDKPK+HLW
Sbjct: 195 TVVYFINHRYDGLQLWLLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEVAAVDKPKLHLW 254

Query: 258 ETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGA 317
           ETGI+RITRHPQMVGQVIWCLAHT+WIGNSVAVAASIGLI HHLFGVWNGDRRLA RYG 
Sbjct: 255 ETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWNGDRRLAIRYGE 314

Query: 318 DFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPYLSITALTIGAYLAHPLMQAASFR 376
           DFE VK RTSVVPFAAILDGRQKLP D+YKEFIRLPYL++TALT+GAY AHPLMQ ASF 
Sbjct: 315 DFELVKSRTSVVPFAAILDGRQKLPKDFYKEFIRLPYLTVTALTLGAYFAHPLMQTASFN 374

[Close]
BLAST of CmoCh06G016450 vs. TrEMBL
Match: I1LN52_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G252500 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 5.0e-142
Identity = 264/373 (70.78%), Postives = 301/373 (80.70%), Query Frame = 1 

Query: 5   SATTLFFPPLPTSSNQPHHRHRRLDAFTLRPSSISTPNF-LPQLPFSLNSSPIPRR-RRF 64
           +A+ +    L    N  +HR   + A +   +SI+  N  L    FS ++S  P   R+F
Sbjct: 2   AASVVVSTSLSVCFNYGYHRRPSISALSCHSNSITKTNLKLSSQCFSNSNSVAPIYCRKF 61

Query: 65  SAEASIGDSESGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTVILGVVLFVLNVVWI 124
            A  SIG++ES     +  + G VGED+AVF L +QK++SW YFT ILGVVL+VLNV WI
Sbjct: 62  VARTSIGENES----ESEKELGFVGEDSAVFELGKQKVSSWIYFTAILGVVLYVLNVAWI 121

Query: 125 DNSAGGVGKAFVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQGEKLVGERAFRVLF 184
           DNS G  GKAF+DA+S LSDS EVVML LI IFA VHSGLAS R+ GEKL+GER FRVLF
Sbjct: 122 DNSTG-YGKAFIDAVSTLSDSSEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVLF 181

Query: 185 AGVSLPLAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFFFLYPSTFNLLEVA 244
           AG+SLPLAVSTVVYFINHRYDG+QLWQL   PGLHQL+WLS+FISFFFLYPSTFNLLEVA
Sbjct: 182 AGISLPLAVSTVVYFINHRYDGLQLWQLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEVA 241

Query: 245 AVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASIGLIGHHLFGVWNG 304
           AVDKPK+HLWETGI+RITRHPQMVGQVIWCLAHT+WIGNSVAVAASIGLI HHLFGVWNG
Sbjct: 242 AVDKPKLHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWNG 301

Query: 305 DRRLAKRYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPYLSITALTIGAYLA 364
           DRRLA RYG DFE VK RTSVVPFAAILDGRQ+LP D+YKEFIRLPYL++TA+T+GAY A
Sbjct: 302 DRRLAIRYGEDFELVKSRTSVVPFAAILDGRQELPKDFYKEFIRLPYLTVTAITLGAYFA 361

Query: 365 HPLMQAASFRLHW 376
           HPLMQAASF LHW
Sbjct: 362 HPLMQAASFNLHW 369

[Close]
BLAST of CmoCh06G016450 vs. TrEMBL
Match: A0A0B2SCI3_GLYSO (15-cis-zeta-carotene isomerase, chloroplastic OS=Glycine soja GN=glysoja_014497 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 8.5e-142
Identity = 264/373 (70.78%), Postives = 301/373 (80.70%), Query Frame = 1 

Query: 5   SATTLFFPPLPTSSNQPHHRHRRLDAFTLRPSSISTPNF-LPQLPFSLNSSPIPRR-RRF 64
           +A+ +    L    N  +HR   + A +   +SI+  N  L    FS ++S  P   R+F
Sbjct: 2   AASVVVSTSLSVCFNYGYHRRPSISALSCYSNSITKTNLKLSSQCFSNSNSVAPIYCRKF 61

Query: 65  SAEASIGDSESGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTVILGVVLFVLNVVWI 124
            A  SIG++ES     +  + G VGED+AVF L +QK++SW YFT ILGVVL+VLNV WI
Sbjct: 62  VARTSIGENES----ESEKELGFVGEDSAVFELGKQKVSSWIYFTAILGVVLYVLNVAWI 121

Query: 125 DNSAGGVGKAFVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQGEKLVGERAFRVLF 184
           DNS G  GKAF+DA+S LSDS EVVML LI IFA VHSGLAS R+ GEKL+GER FRVLF
Sbjct: 122 DNSTG-YGKAFIDAVSTLSDSSEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVLF 181

Query: 185 AGVSLPLAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFFFLYPSTFNLLEVA 244
           AG+SLPLAVSTVVYFINHRYDG+QLWQL   PGLHQL+WLS+FISFFFLYPSTFNLLEVA
Sbjct: 182 AGISLPLAVSTVVYFINHRYDGLQLWQLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEVA 241

Query: 245 AVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASIGLIGHHLFGVWNG 304
           AVDKPK+HLWETGI+RITRHPQMVGQVIWCLAHT+WIGNSVAVAASIGLI HHLFGVWNG
Sbjct: 242 AVDKPKLHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWNG 301

Query: 305 DRRLAKRYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPYLSITALTIGAYLA 364
           DRRLA RYG DFE VK RTSVVPFAAILDGRQ+LP D+YKEFIRLPYL++TA+T+GAY A
Sbjct: 302 DRRLAIRYGEDFELVKSRTSVVPFAAILDGRQELPKDFYKEFIRLPYLTVTAITLGAYFA 361

Query: 365 HPLMQAASFRLHW 376
           HPLMQAASF LHW
Sbjct: 362 HPLMQAASFNLHW 369

[Close]
BLAST of CmoCh06G016450 vs. TAIR10
Match: AT1G10830.1 (AT1G10830.1 15-cis-zeta-carotene isomerase)

HSP 1 Score: 495.7 bits (1275), Expect = 2.4e-140
Identity = 235/326 (72.09%), Postives = 278/326 (85.28%), Query Frame = 1 

Query: 50  SLNSSPIPRRRRFSAEASIGDSESGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTVI 109
           SL SS  P  R+    +++ + +   S S S    L+GED+A F L +QKL SW YF V+
Sbjct: 43  SLLSSSSPVIRKILVRSTLREDQPIASDSESSPTLLIGEDSAAFELGKQKLVSWVYFGVV 102

Query: 110 LGVVLFVLNVVWIDNSAGGVGKAFVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQG 169
           LGVVLF+LNVVWIDNS G  GK+F+DA+S +S S EV ML LI IFA+VHSGLASLRD G
Sbjct: 103 LGVVLFILNVVWIDNSTG-FGKSFIDAVSNISGSPEVAMLMLILIFAIVHSGLASLRDIG 162

Query: 170 EKLVGERAFRVLFAGVSLPLAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFF 229
           EKL+GERAFRVLFAG+SLPLA+ST+VYFINHRYDG QLWQL  +PG+H+ +W+++F+SFF
Sbjct: 163 EKLIGERAFRVLFAGISLPLAMSTIVYFINHRYDGSQLWQLQGVPGVHEAIWVANFVSFF 222

Query: 230 FLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASI 289
           FLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQ++WCLAHT+WIGN+VA +AS+
Sbjct: 223 FLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQIVWCLAHTLWIGNTVAASASL 282

Query: 290 GLIGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPY 349
           GLI HHLFG WNGDRRLAKRYG DFE++K+RTSV+PFAAI +GRQ LP+DYYKEF+RLPY
Sbjct: 283 GLIAHHLFGAWNGDRRLAKRYGEDFESIKKRTSVIPFAAIFEGRQVLPEDYYKEFVRLPY 342

Query: 350 LSITALTIGAYLAHPLMQAASFRLHW 376
           L+ITALT+GAY AHPLMQ ASFRLHW
Sbjct: 343 LAITALTVGAYFAHPLMQGASFRLHW 367

[Close]
BLAST of CmoCh06G016450 vs. NCBI nr
Match: gi|449468784|ref|XP_004152101.1| (PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Cucumis sativus])

HSP 1 Score: 644.4 bits (1661), Expect = 1.2e-181
Identity = 326/375 (86.93%), Postives = 342/375 (91.20%), Query Frame = 1 

Query: 1   MAVASATTLFFPPLPTSSNQPHHRHRRLDAFTLRPSSISTPNFLPQLPFSLNSSPIPRRR 60
           MAVASAT  F PP  +S   P HRHRR DA + RP SISTPN L QLP SLNS  I RR 
Sbjct: 1   MAVASATPPFSPPFLSS---PRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRP 60

Query: 61  RFSAEASIGDSESGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTVILGVVLFVLNVV 120
           R  AEASIGD ESGGSTS SDD+G VGEDAA F+LSEQKL SW YFTVILGVVLFVLNVV
Sbjct: 61  RLVAEASIGDRESGGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVV 120

Query: 121 WIDNSAGGVGKAFVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQGEKLVGERAFRV 180
           WIDNSAGGVGKAF+DA+SG+SDSHEVVML LIFIFA+VHSGLASLRDQGEKLVGERAFRV
Sbjct: 121 WIDNSAGGVGKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRV 180

Query: 181 LFAGVSLPLAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFFFLYPSTFNLLE 240
           LFAGVSLPLAVSTVVYFINHRYDGVQLWQL S+P LHQLVWLSSF+SF FLYPSTFNLLE
Sbjct: 181 LFAGVSLPLAVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLE 240

Query: 241 VAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASIGLIGHHLFGVW 300
           VAAVDKPKMHLWETGI+RITRHPQMVGQVIWCLAHT+WIGNSVAVAASIGLIGHHLFGVW
Sbjct: 241 VAAVDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVW 300

Query: 301 NGDRRLAKRYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPYLSITALTIGAY 360
           NGDRRLAKRYGADFEAVK RTS++PFAAI+DGRQKLPDDYYKEF+RLPYLSITALTIGAY
Sbjct: 301 NGDRRLAKRYGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAY 360

Query: 361 LAHPLMQAASFRLHW 376
           LAHPLMQAASFRLHW
Sbjct: 361 LAHPLMQAASFRLHW 372

[Close]
BLAST of CmoCh06G016450 vs. NCBI nr
Match: gi|659108018|ref|XP_008453974.1| (PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Cucumis melo])

HSP 1 Score: 644.0 bits (1660), Expect = 1.6e-181
Identity = 326/375 (86.93%), Postives = 344/375 (91.73%), Query Frame = 1 

Query: 1   MAVASATTLFFPPLPTSSNQPHHRHRRLDAFTLRPSSISTPNFLPQLPFSLNSSPIPRRR 60
           MAVASAT  F PP  +S      RHRR DA +LRP SIS PN L QLP SLNS  I RR 
Sbjct: 1   MAVASATPPFSPPYLSSP-----RHRRPDAISLRPFSISAPNCLLQLPLSLNSLHIFRRP 60

Query: 61  RFSAEASIGDSESGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTVILGVVLFVLNVV 120
           RF+AEASIGD ESGGSTS SDD+GLVGEDAAVF+LSEQKL SW YFTVILGVVLFVLNVV
Sbjct: 61  RFAAEASIGDRESGGSTSVSDDEGLVGEDAAVFDLSEQKLTSWVYFTVILGVVLFVLNVV 120

Query: 121 WIDNSAGGVGKAFVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQGEKLVGERAFRV 180
           WIDNSAGGVGKAF+DA+SG+SDSHEVVML L  IFA+VHSGLASLRDQGEKLVGERAFRV
Sbjct: 121 WIDNSAGGVGKAFLDAVSGISDSHEVVMLLLTLIFAIVHSGLASLRDQGEKLVGERAFRV 180

Query: 181 LFAGVSLPLAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFFFLYPSTFNLLE 240
           LFAGVSLPLAVSTVVYFINHRYDGVQLWQL S+PGLHQLVWLSSF+SFFFLYPSTFNLLE
Sbjct: 181 LFAGVSLPLAVSTVVYFINHRYDGVQLWQLQSVPGLHQLVWLSSFVSFFFLYPSTFNLLE 240

Query: 241 VAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASIGLIGHHLFGVW 300
           VAAVDKPKMHLWETGI+RITRHPQMVGQVIWCLAHT+WIGNSVAVAASIGLIGHHLFGVW
Sbjct: 241 VAAVDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVW 300

Query: 301 NGDRRLAKRYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPYLSITALTIGAY 360
           NGDRRLAKRYG DFEAV+RRTS++PFAAI+DGRQKLPDDYYKEF+RLPYLSITALTIGAY
Sbjct: 301 NGDRRLAKRYGVDFEAVQRRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAY 360

Query: 361 LAHPLMQAASFRLHW 376
           LAHPLMQAASFRLHW
Sbjct: 361 LAHPLMQAASFRLHW 370

[Close]
BLAST of CmoCh06G016450 vs. NCBI nr
Match: gi|720093149|ref|XP_010245966.1| (PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Nelumbo nucifera])

HSP 1 Score: 518.5 bits (1334), Expect = 1.0e-143
Identity = 253/317 (79.81%), Postives = 283/317 (89.27%), Query Frame = 1 

Query: 60  RRFSAEASIGDSESGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTVILGVVLFVLNV 119
           R+  A  S+G++E  GS S   D+ LVGED+A F++ +QKL+SW YFT ILG VLF L+V
Sbjct: 61  RKILAGTSVGETEEKGSVS---DEFLVGEDSAAFDIGKQKLSSWVYFTGILGTVLFALDV 120

Query: 120 VWIDNSAG-GVGKAFVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQGEKLVGERAF 179
           VWID+S G GVGKAF+DA++ LSDSHEVVML LIFIFAVVHSG+AS RD GEKL+GERA+
Sbjct: 121 VWIDSSTGLGVGKAFIDAVASLSDSHEVVMLILIFIFAVVHSGMASFRDLGEKLIGERAY 180

Query: 180 RVLFAGVSLPLAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFFFLYPSTFNL 239
           RVLFAG+SLPLAVSTVVYFINHRYDG+QLWQL S+PG+HQLVW+SSFISFFFLYPSTFNL
Sbjct: 181 RVLFAGISLPLAVSTVVYFINHRYDGIQLWQLQSVPGVHQLVWISSFISFFFLYPSTFNL 240

Query: 240 LEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASIGLIGHHLFG 299
           LEVAAVDKPKMHLWETGIMRITRHPQMVGQ +WCLAHT+WIGNSVAVAASIGLIGHHLFG
Sbjct: 241 LEVAAVDKPKMHLWETGIMRITRHPQMVGQTMWCLAHTLWIGNSVAVAASIGLIGHHLFG 300

Query: 300 VWNGDRRLAKRYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPYLSITALTIG 359
           VWNGDRRLA RYG  FE VK RTSV+PF AI+DGRQKL  DYYKEFIRLPY++ITALT+G
Sbjct: 301 VWNGDRRLASRYGEAFEIVKSRTSVIPFGAIIDGRQKLTKDYYKEFIRLPYIAITALTLG 360

Query: 360 AYLAHPLMQAASFRLHW 376
           AY AHPLMQAASFRLHW
Sbjct: 361 AYWAHPLMQAASFRLHW 374

[Close]
BLAST of CmoCh06G016450 vs. NCBI nr
Match: gi|356569844|ref|XP_003553105.1| (PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like [Glycine max])

HSP 1 Score: 513.5 bits (1321), Expect = 3.2e-142
Identity = 266/363 (73.28%), Postives = 294/363 (80.99%), Query Frame = 1 

Query: 18  SNQPHHRHRRLDAFTLRPSSISTPNF-LPQLPFS----LNSSPIPRRRRFSAEASIGDSE 77
           SN  +HR   L A +   +SIS  N  L    FS     NS      R+F A  SIG++E
Sbjct: 15  SNYGYHRRPSLSALSYYSNSISNANLKLSSQCFSNLLRSNSKAPIYCRKFVARTSIGENE 74

Query: 78  SGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTVILGVVLFVLNVVWIDNSAGGVGKA 137
           S   + +  D GLVGED+A F L +QK++SW YFT ILGVVL VLNV WIDNS G  GKA
Sbjct: 75  S--ESESEKDLGLVGEDSAAFELGKQKISSWIYFTAILGVVLCVLNVAWIDNSTG-YGKA 134

Query: 138 FVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVS 197
           F+DA+S LSDSHEVVML LI IFA VHSGLAS R+ GEKL+GER FRV+FAG+SLPLAVS
Sbjct: 135 FIDAVSTLSDSHEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVIFAGISLPLAVS 194

Query: 198 TVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFFFLYPSTFNLLEVAAVDKPKMHLW 257
           TVVYFINHRYDG+QLW L   PGLHQL+WLS+FISFFFLYPSTFNLLEVAAVDKPK+HLW
Sbjct: 195 TVVYFINHRYDGLQLWLLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEVAAVDKPKLHLW 254

Query: 258 ETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGA 317
           ETGI+RITRHPQMVGQVIWCLAHT+WIGNSVAVAASIGLI HHLFGVWNGDRRLA RYG 
Sbjct: 255 ETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWNGDRRLAIRYGE 314

Query: 318 DFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPYLSITALTIGAYLAHPLMQAASFR 376
           DFE VK RTSVVPFAAILDGRQKLP D+YKEFIRLPYL++TALT+GAY AHPLMQ ASF 
Sbjct: 315 DFELVKSRTSVVPFAAILDGRQKLPKDFYKEFIRLPYLTVTALTLGAYFAHPLMQTASFN 374

[Close]
BLAST of CmoCh06G016450 vs. NCBI nr
Match: gi|947082743|gb|KRH31532.1| (hypothetical protein GLYMA_11G252500 [Glycine max])

HSP 1 Score: 512.3 bits (1318), Expect = 7.1e-142
Identity = 264/373 (70.78%), Postives = 301/373 (80.70%), Query Frame = 1 

Query: 5   SATTLFFPPLPTSSNQPHHRHRRLDAFTLRPSSISTPNF-LPQLPFSLNSSPIPRR-RRF 64
           +A+ +    L    N  +HR   + A +   +SI+  N  L    FS ++S  P   R+F
Sbjct: 2   AASVVVSTSLSVCFNYGYHRRPSISALSCHSNSITKTNLKLSSQCFSNSNSVAPIYCRKF 61

Query: 65  SAEASIGDSESGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTVILGVVLFVLNVVWI 124
            A  SIG++ES     +  + G VGED+AVF L +QK++SW YFT ILGVVL+VLNV WI
Sbjct: 62  VARTSIGENES----ESEKELGFVGEDSAVFELGKQKVSSWIYFTAILGVVLYVLNVAWI 121

Query: 125 DNSAGGVGKAFVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQGEKLVGERAFRVLF 184
           DNS G  GKAF+DA+S LSDS EVVML LI IFA VHSGLAS R+ GEKL+GER FRVLF
Sbjct: 122 DNSTG-YGKAFIDAVSTLSDSSEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVLF 181

Query: 185 AGVSLPLAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFFFLYPSTFNLLEVA 244
           AG+SLPLAVSTVVYFINHRYDG+QLWQL   PGLHQL+WLS+FISFFFLYPSTFNLLEVA
Sbjct: 182 AGISLPLAVSTVVYFINHRYDGLQLWQLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEVA 241

Query: 245 AVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASIGLIGHHLFGVWNG 304
           AVDKPK+HLWETGI+RITRHPQMVGQVIWCLAHT+WIGNSVAVAASIGLI HHLFGVWNG
Sbjct: 242 AVDKPKLHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWNG 301

Query: 305 DRRLAKRYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPYLSITALTIGAYLA 364
           DRRLA RYG DFE VK RTSVVPFAAILDGRQ+LP D+YKEFIRLPYL++TA+T+GAY A
Sbjct: 302 DRRLAIRYGEDFELVKSRTSVVPFAAILDGRQELPKDFYKEFIRLPYLTVTAITLGAYFA 361

Query: 365 HPLMQAASFRLHW 376
           HPLMQAASF LHW
Sbjct: 362 HPLMQAASFNLHW 369

The following BLAST results are available for this feature:
BLAST of CmoCh06G016450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZCIS_ARATH4.3e-13972.0915-cis-zeta-carotene isomerase, chloroplastic OS=Arabidopsis thaliana GN=Z-ISO P... [more]
ZCIS_MAIZE2.2e-13072.9615-cis-zeta-carotene isomerase, chloroplastic OS=Zea mays PE=1 SV=1[more]
BLAST of CmoCh06G016450 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXF1_CUCSA8.4e-18286.93Uncharacterized protein OS=Cucumis sativus GN=Csa_4G015720 PE=4 SV=1[more]
I1MYD2_SOYBN2.2e-14273.28Uncharacterized protein OS=Glycine max GN=GLYMA_18G004400 PE=4 SV=1[more]
A0A0B2QW68_GLYSO2.2e-14273.2815-cis-zeta-carotene isomerase, chloroplastic OS=Glycine soja GN=glysoja_025221 ... [more]
I1LN52_SOYBN5.0e-14270.78Uncharacterized protein OS=Glycine max GN=GLYMA_11G252500 PE=4 SV=1[more]
A0A0B2SCI3_GLYSO8.5e-14270.7815-cis-zeta-carotene isomerase, chloroplastic OS=Glycine soja GN=glysoja_014497 ... [more]
BLAST of CmoCh06G016450 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10830.12.4e-14072.09 15-cis-zeta-carotene isomerase[more]
BLAST of CmoCh06G016450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449468784|ref|XP_004152101.1|1.2e-18186.93PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Cucumis sativus][more]
gi|659108018|ref|XP_008453974.1|1.6e-18186.93PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Cucumis melo][more]
gi|720093149|ref|XP_010245966.1|1.0e-14379.81PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Nelumbo nucifera][more]
gi|356569844|ref|XP_003553105.1|3.2e-14273.28PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like [Glycine max][more]
gi|947082743|gb|KRH31532.1|7.1e-14270.78hypothetical protein GLYMA_11G252500 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009915NnrU_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016853 isomerase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G016450.1CmoCh06G016450.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009915NnrU domainPFAMPF07298NnrUcoord: 147..366
score: 4.2
NoneNo IPR availablePANTHERPTHR35988FAMILY NOT NAMEDcoord: 7..375
score: 5.5E
NoneNo IPR availablePANTHERPTHR35988:SF215-CIS-ZETA-CAROTENE ISOMERASE, CHLOROPLASTICcoord: 7..375
score: 5.5E