CmoCh06G015210 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G015210
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionAcyl-CoA dehydrogenase-related family protein
LocationCmo_Chr06 : 10820760 .. 10821874 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCGGTCTATTTGGGCTCCTCAGGTGTTTAACTGTGGTGCACCTGACACTGGAAATAAGGAGGTAAGATCAGATTTTATAGCCTGGATTCTGCTTGCTAGGCTGCCGCCTTTTGTAGATTGCCTAAATTCTCACCACTGCTGTACTGGATTCTGGCTCTACTCTAATAAATTGAATAGACCAATGAATGAATTAGATCTGTATGCAATTTTCTTACGATTATACTCTTTGCATATCTTCTGGGCTGTAGGTGGAGTAATGTATGGTTGGTTATAAATGCGTTGTATCTTTGACACCAATGGTATGGTCAATTTTTGACAAAAATTTATGATGCAATTTAAGCATCCATTATTGGAGCTATTATTTATCATTTTGTCCTTTCATCAGGTATTGTTGCGGTATGGCAATAAACAACAACTACATGAATGGCTTATTCCTTTACTTGAAGGAAAGATACGGTCGGGATTTGCAATGACTGAACCACAAGTTGCATCCTCTGATGCAACAAATATTGAATGTTCAATCAAAAGGTAACGATGTAACATTTATTCATAGAAAAGATCTCTCCTAATTAAGTTATTAGCTTATGGAAAAAGAGAAAGAAAAAAAAAATACTTCCACTTATTGGATTACATTATTTTGCATTCATAGTTCTGTAATGATTTCTAGAATGCAAATTGATTTTTTTTAGAAATATGAAAGATCTTGAAGTGTACATGCATCATGGAGTTTGTTATTGGTATAATTACACTTCAACTGTTAACTTGCATGCAGGGATGGATACTCCTTTGTCATCAATCGAAGAAAATGGTGGACAAGTGGAGCCATGGATCCGAGGTGCAAAATCCTTATAGTTATGGTTAGTTCTACTATTTATAAGAATTGTTTATTCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGATTTAAGTTATATTAGTATCGATGCAACGAGGGGTTCTCCATTATTTGCAGGGAAAAACAGTTGCTACTGCTGCTATGCTTCTCTCCATTATTTGCAGGGAAAAATAG

mRNA sequence

ATGGGTCGGTCTATTTGGGCTCCTCAGGTGTTTAACTGTGGTGCACCTGACACTGGAAATAAGGAGGTATTGTTGCGGTATGGCAATAAACAACAACTACATGAATGGCTTATTCCTTTACTTGAAGGAAAGATACGGTCGGGATTTGCAATGACTGAACCACAAGTTGCATCCTCTGATGCAACAAATATTGAATGTTCAATCAAAAGGGATGGATACTCCTTTGTCATCAATCGAAGAAAATGGTGGACAAGTGGAGCCATGGATCCGAGGTGCAAAATCCTTATAGTTATGGGAAAAACAGTTGCTACTGCTGCTATGCTTCTCTCCATTATTTGCAGGGAAAAATAG

Coding sequence (CDS)

ATGGGTCGGTCTATTTGGGCTCCTCAGGTGTTTAACTGTGGTGCACCTGACACTGGAAATAAGGAGGTATTGTTGCGGTATGGCAATAAACAACAACTACATGAATGGCTTATTCCTTTACTTGAAGGAAAGATACGGTCGGGATTTGCAATGACTGAACCACAAGTTGCATCCTCTGATGCAACAAATATTGAATGTTCAATCAAAAGGGATGGATACTCCTTTGTCATCAATCGAAGAAAATGGTGGACAAGTGGAGCCATGGATCCGAGGTGCAAAATCCTTATAGTTATGGGAAAAACAGTTGCTACTGCTGCTATGCTTCTCTCCATTATTTGCAGGGAAAAATAG
Homology
[Close]
BLAST of CmoCh06G015210 vs. Swiss-Prot
Match: IBR3_ARATH (Probable acyl-CoA dehydrogenase IBR3 OS=Arabidopsis thaliana GN=IBR3 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-48
Identity = 85/101 (84.16%), Postives = 95/101 (94.06%), Query Frame = 1 

Query: 1   MGRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 60
           MGRS+WAPQVFNCGAPDTGN EV+LRYGNK+Q+ EWLIPLLEG+IRSGFAMTEPQVASSD
Sbjct: 507 MGRSVWAPQVFNCGAPDTGNMEVILRYGNKEQISEWLIPLLEGRIRSGFAMTEPQVASSD 566

Query: 61  ATNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKT 102
           ATNIECSI+R G S+VIN  KWWTSGAMDPRC++LI+MGKT
Sbjct: 567 ATNIECSIRRQGDSYVINGTKWWTSGAMDPRCRVLILMGKT 607

[Close]
BLAST of CmoCh06G015210 vs. Swiss-Prot
Match: ACD10_MOUSE (Acyl-CoA dehydrogenase family member 10 OS=Mus musculus GN=Acad10 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.2e-36
Identity = 66/101 (65.35%), Postives = 82/101 (81.19%), Query Frame = 1 

Query: 1   MGRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 60
           MG S++A ++FNC APDTGN E+L+RYG ++Q   WL+PLLEG+IRS FAMTEPQVASSD
Sbjct: 744 MGMSLYASEIFNCSAPDTGNMEILVRYGTEEQKARWLVPLLEGRIRSCFAMTEPQVASSD 803

Query: 61  ATNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKT 102
           A+NIE SIK +   +VIN  KWWTSG +DPRCK+ + MGKT
Sbjct: 804 ASNIEASIKEEDGCYVINGHKWWTSGILDPRCKLCVFMGKT 844

[Close]
BLAST of CmoCh06G015210 vs. Swiss-Prot
Match: ACD11_CHICK (Acyl-CoA dehydrogenase family member 11 OS=Gallus gallus GN=ACAD11 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 4.7e-36
Identity = 69/105 (65.71%), Postives = 84/105 (80.00%), Query Frame = 1 

Query: 2   GRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSDA 61
           G+  +AP+VFNC APDTGN EVL  YG ++Q  EWL PLLEGKI S F MTEP VASSDA
Sbjct: 454 GKRFFAPEVFNCQAPDTGNMEVLHLYGTEEQKKEWLEPLLEGKISSCFCMTEPDVASSDA 513

Query: 62  TNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKTVATAA 107
           TN++CSI+RDG S+VIN +KWW+SGA +P CK+ IVMGKT  ++A
Sbjct: 514 TNMQCSIERDGNSYVINGKKWWSSGAGNPNCKVAIVMGKTKNSSA 558

[Close]
BLAST of CmoCh06G015210 vs. Swiss-Prot
Match: ACD10_HUMAN (Acyl-CoA dehydrogenase family member 10 OS=Homo sapiens GN=ACAD10 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-34
Identity = 65/101 (64.36%), Postives = 79/101 (78.22%), Query Frame = 1 

Query: 1   MGRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 60
           MG S++AP+V NC APDTGN E+L+RYG + Q   WLIPLLEGK RS FAMTEPQVASSD
Sbjct: 744 MGTSLYAPEVCNCSAPDTGNMELLVRYGTEAQKARWLIPLLEGKARSCFAMTEPQVASSD 803

Query: 61  ATNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKT 102
           ATNIE SI+ +   +VIN  KWW +G +DPRC++ + MGKT
Sbjct: 804 ATNIEASIREEDSFYVINGHKWWITGILDPRCQLCVFMGKT 844

[Close]
BLAST of CmoCh06G015210 vs. Swiss-Prot
Match: ACD11_HUMAN (Acyl-CoA dehydrogenase family member 11 OS=Homo sapiens GN=ACAD11 PE=1 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 5.8e-34
Identity = 66/104 (63.46%), Postives = 82/104 (78.85%), Query Frame = 1 

Query: 2   GRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSDA 61
           G+  +AP VFNC APDTGN EVL  YG+++Q  +WL PLL+G I S F MTEP VASSDA
Sbjct: 457 GKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDA 516

Query: 62  TNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKTVATA 106
           TNIECSI+RD  S+VIN +KWW+SGA +P+CKI IV+G+T  T+
Sbjct: 517 TNIECSIQRDEDSYVINGKKWWSSGAGNPKCKIAIVLGRTQNTS 560

[Close]
BLAST of CmoCh06G015210 vs. TrEMBL
Match: A0A0A0L5U9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G164520 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 6.2e-51
Identity = 97/107 (90.65%), Postives = 100/107 (93.46%), Query Frame = 1 

Query: 1   MGRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 60
           MGRSIWAPQVFNCGAPDTGN EVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD
Sbjct: 514 MGRSIWAPQVFNCGAPDTGNMEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 573

Query: 61  ATNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKTVATAAM 108
           ATNIECSI R+G +FVIN RKWWTSGAMDPRCKILIVMGKT  TA +
Sbjct: 574 ATNIECSITREGDTFVINGRKWWTSGAMDPRCKILIVMGKTDVTAPL 620

[Close]
BLAST of CmoCh06G015210 vs. TrEMBL
Match: B9HXR1_POPTR (Acyl-CoA dehydrogenase-related family protein OS=Populus trichocarpa GN=POPTR_0010s01370g PE=4 SV=2)

HSP 1 Score: 202.6 bits (514), Expect = 2.6e-49
Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 1 

Query: 1   MGRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 60
           MGRS+WAPQVFNCGAPDTGN EVLLRYGNK+QL EWL+PLL+GKIRSGFAMTEPQVASSD
Sbjct: 507 MGRSVWAPQVFNCGAPDTGNMEVLLRYGNKEQLLEWLVPLLQGKIRSGFAMTEPQVASSD 566

Query: 61  ATNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKTVATAA 107
           ATNIECSIKR+G S++IN RKWWTSGAMDPRCK+LIVMGKT  TAA
Sbjct: 567 ATNIECSIKREGDSYIINGRKWWTSGAMDPRCKVLIVMGKTDFTAA 612

[Close]
BLAST of CmoCh06G015210 vs. TrEMBL
Match: D7SYA9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01940 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.6e-49
Identity = 91/105 (86.67%), Postives = 99/105 (94.29%), Query Frame = 1 

Query: 1   MGRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 60
           MGRS+WAPQVFNCGAPDTGN EVLLRYGNK+QLHEWLIPLLEGKIRSGF+MTEPQVASSD
Sbjct: 504 MGRSVWAPQVFNCGAPDTGNMEVLLRYGNKEQLHEWLIPLLEGKIRSGFSMTEPQVASSD 563

Query: 61  ATNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKTVATA 106
           ATNIECSI+R G S++IN +KWWTSGAMDPRCK+LIVMGKT  TA
Sbjct: 564 ATNIECSIRRQGDSYIINGKKWWTSGAMDPRCKLLIVMGKTDFTA 608

[Close]
BLAST of CmoCh06G015210 vs. TrEMBL
Match: B9RT92_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0682070 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 3.8e-48
Identity = 90/105 (85.71%), Postives = 98/105 (93.33%), Query Frame = 1 

Query: 1   MGRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 60
           MGRS+WAPQVFNCGAPDTGN EVLLRYGNK+QL EWLIPLLEGKIRSGFAMTEPQVASSD
Sbjct: 506 MGRSVWAPQVFNCGAPDTGNMEVLLRYGNKEQLLEWLIPLLEGKIRSGFAMTEPQVASSD 565

Query: 61  ATNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKTVATA 106
           ATNIECSI+R G S++IN +KWWTSGAMDPRC++LIVMGKT  TA
Sbjct: 566 ATNIECSIRRQGDSYIINGKKWWTSGAMDPRCRVLIVMGKTDFTA 610

[Close]
BLAST of CmoCh06G015210 vs. TrEMBL
Match: A0A061EPI1_THECC (Acyl-CoA dehydrogenase-related isoform 1 OS=Theobroma cacao GN=TCM_021252 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 4.9e-48
Identity = 89/105 (84.76%), Postives = 97/105 (92.38%), Query Frame = 1 

Query: 1   MGRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 60
           MGRS+WAPQVFNCGAPDTGN EVLLRYG K+QLHEWL+PLLEG+IRSGFAMTEPQVASSD
Sbjct: 511 MGRSVWAPQVFNCGAPDTGNMEVLLRYGTKEQLHEWLVPLLEGRIRSGFAMTEPQVASSD 570

Query: 61  ATNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKTVATA 106
           ATNIECSIKR G S++IN  KWWTSGAMDPRC+ILI+MGKT  TA
Sbjct: 571 ATNIECSIKRQGDSYIINGTKWWTSGAMDPRCRILILMGKTDFTA 615

[Close]
BLAST of CmoCh06G015210 vs. TAIR10
Match: AT3G06810.1 (AT3G06810.1 acyl-CoA dehydrogenase-related)

HSP 1 Score: 193.7 bits (491), Expect = 6.1e-50
Identity = 85/101 (84.16%), Postives = 95/101 (94.06%), Query Frame = 1 

Query: 1   MGRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 60
           MGRS+WAPQVFNCGAPDTGN EV+LRYGNK+Q+ EWLIPLLEG+IRSGFAMTEPQVASSD
Sbjct: 507 MGRSVWAPQVFNCGAPDTGNMEVILRYGNKEQISEWLIPLLEGRIRSGFAMTEPQVASSD 566

Query: 61  ATNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKT 102
           ATNIECSI+R G S+VIN  KWWTSGAMDPRC++LI+MGKT
Sbjct: 567 ATNIECSIRRQGDSYVINGTKWWTSGAMDPRCRVLILMGKT 607

[Close]
BLAST of CmoCh06G015210 vs. NCBI nr
Match: gi|778678957|ref|XP_011651064.1| (PREDICTED: acyl-CoA dehydrogenase family member 10 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 8.9e-51
Identity = 97/107 (90.65%), Postives = 100/107 (93.46%), Query Frame = 1 

Query: 1   MGRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 60
           MGRSIWAPQVFNCGAPDTGN EVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD
Sbjct: 514 MGRSIWAPQVFNCGAPDTGNMEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 573

Query: 61  ATNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKTVATAAM 108
           ATNIECSI R+G +FVIN RKWWTSGAMDPRCKILIVMGKT  TA +
Sbjct: 574 ATNIECSITREGDTFVINGRKWWTSGAMDPRCKILIVMGKTDVTAPL 620

[Close]
BLAST of CmoCh06G015210 vs. NCBI nr
Match: gi|659076871|ref|XP_008438907.1| (PREDICTED: acyl-CoA dehydrogenase family member 10 [Cucumis melo])

HSP 1 Score: 206.8 bits (525), Expect = 2.0e-50
Identity = 96/107 (89.72%), Postives = 100/107 (93.46%), Query Frame = 1 

Query: 1   MGRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 60
           MGRSIWAPQVFNCGAPDTGN EVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD
Sbjct: 514 MGRSIWAPQVFNCGAPDTGNMEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 573

Query: 61  ATNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKTVATAAM 108
           ATNIECSI R+G ++VIN RKWWTSGAMDPRCKILIVMGKT  TA +
Sbjct: 574 ATNIECSITREGDTYVINGRKWWTSGAMDPRCKILIVMGKTDVTAPL 620

[Close]
BLAST of CmoCh06G015210 vs. NCBI nr
Match: gi|359477175|ref|XP_003631946.1| (PREDICTED: acyl-CoA dehydrogenase family member 10 [Vitis vinifera])

HSP 1 Score: 202.6 bits (514), Expect = 3.7e-49
Identity = 91/105 (86.67%), Postives = 99/105 (94.29%), Query Frame = 1 

Query: 1   MGRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 60
           MGRS+WAPQVFNCGAPDTGN EVLLRYGNK+QLHEWLIPLLEGKIRSGF+MTEPQVASSD
Sbjct: 504 MGRSVWAPQVFNCGAPDTGNMEVLLRYGNKEQLHEWLIPLLEGKIRSGFSMTEPQVASSD 563

Query: 61  ATNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKTVATA 106
           ATNIECSI+R G S++IN +KWWTSGAMDPRCK+LIVMGKT  TA
Sbjct: 564 ATNIECSIRRQGDSYIINGKKWWTSGAMDPRCKLLIVMGKTDFTA 608

[Close]
BLAST of CmoCh06G015210 vs. NCBI nr
Match: gi|743933142|ref|XP_011010879.1| (PREDICTED: acyl-CoA dehydrogenase family member 10-like [Populus euphratica])

HSP 1 Score: 202.6 bits (514), Expect = 3.7e-49
Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 1 

Query: 1   MGRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 60
           MGRS+WAPQVFNCGAPDTGN EVLLRYGNK+QL EWL+PLL+GKIRSGFAMTEPQVASSD
Sbjct: 506 MGRSVWAPQVFNCGAPDTGNMEVLLRYGNKEQLLEWLVPLLQGKIRSGFAMTEPQVASSD 565

Query: 61  ATNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKTVATAA 107
           ATNIECSIKR+G S++IN RKWWTSGAMDPRCK+LIVMGKT  TAA
Sbjct: 566 ATNIECSIKREGDSYIINGRKWWTSGAMDPRCKVLIVMGKTDFTAA 611

[Close]
BLAST of CmoCh06G015210 vs. NCBI nr
Match: gi|566188611|ref|XP_002314363.2| (acyl-CoA dehydrogenase-related family protein [Populus trichocarpa])

HSP 1 Score: 202.6 bits (514), Expect = 3.7e-49
Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 1 

Query: 1   MGRSIWAPQVFNCGAPDTGNKEVLLRYGNKQQLHEWLIPLLEGKIRSGFAMTEPQVASSD 60
           MGRS+WAPQVFNCGAPDTGN EVLLRYGNK+QL EWL+PLL+GKIRSGFAMTEPQVASSD
Sbjct: 507 MGRSVWAPQVFNCGAPDTGNMEVLLRYGNKEQLLEWLVPLLQGKIRSGFAMTEPQVASSD 566

Query: 61  ATNIECSIKRDGYSFVINRRKWWTSGAMDPRCKILIVMGKTVATAA 107
           ATNIECSIKR+G S++IN RKWWTSGAMDPRCK+LIVMGKT  TAA
Sbjct: 567 ATNIECSIKREGDSYIINGRKWWTSGAMDPRCKVLIVMGKTDFTAA 612

The following BLAST results are available for this feature:
BLAST of CmoCh06G015210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IBR3_ARATH1.1e-4884.16Probable acyl-CoA dehydrogenase IBR3 OS=Arabidopsis thaliana GN=IBR3 PE=1 SV=1[more]
ACD10_MOUSE1.2e-3665.35Acyl-CoA dehydrogenase family member 10 OS=Mus musculus GN=Acad10 PE=1 SV=1[more]
ACD11_CHICK4.7e-3665.71Acyl-CoA dehydrogenase family member 11 OS=Gallus gallus GN=ACAD11 PE=2 SV=1[more]
ACD10_HUMAN1.2e-3464.36Acyl-CoA dehydrogenase family member 10 OS=Homo sapiens GN=ACAD10 PE=1 SV=1[more]
ACD11_HUMAN5.8e-3463.46Acyl-CoA dehydrogenase family member 11 OS=Homo sapiens GN=ACAD11 PE=1 SV=2[more]
BLAST of CmoCh06G015210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5U9_CUCSA6.2e-5190.65Uncharacterized protein OS=Cucumis sativus GN=Csa_3G164520 PE=4 SV=1[more]
B9HXR1_POPTR2.6e-4986.79Acyl-CoA dehydrogenase-related family protein OS=Populus trichocarpa GN=POPTR_00... [more]
D7SYA9_VITVI2.6e-4986.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01940 PE=4 SV=... [more]
B9RT92_RICCO3.8e-4885.71Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0682070 PE=4 SV=1[more]
A0A061EPI1_THECC4.9e-4884.76Acyl-CoA dehydrogenase-related isoform 1 OS=Theobroma cacao GN=TCM_021252 PE=4 S... [more]
BLAST of CmoCh06G015210 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06810.16.1e-5084.16 acyl-CoA dehydrogenase-related[more]
BLAST of CmoCh06G015210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778678957|ref|XP_011651064.1|8.9e-5190.65PREDICTED: acyl-CoA dehydrogenase family member 10 [Cucumis sativus][more]
gi|659076871|ref|XP_008438907.1|2.0e-5089.72PREDICTED: acyl-CoA dehydrogenase family member 10 [Cucumis melo][more]
gi|359477175|ref|XP_003631946.1|3.7e-4986.67PREDICTED: acyl-CoA dehydrogenase family member 10 [Vitis vinifera][more]
gi|743933142|ref|XP_011010879.1|3.7e-4986.79PREDICTED: acyl-CoA dehydrogenase family member 10-like [Populus euphratica][more]
gi|566188611|ref|XP_002314363.2|3.7e-4986.79acyl-CoA dehydrogenase-related family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006091Acyl-CoA_Oxase/DH_cen-dom
IPR009100AcylCoA_DH/oxidase_NM_dom
IPR013786AcylCoA_DH/ox_N
Vocabulary: Molecular Function
TermDefinition
GO:0003995acyl-CoA dehydrogenase activity
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009610 response to symbiotic fungus
biological_process GO:0048767 root hair elongation
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003995 acyl-CoA dehydrogenase activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G015210.1CmoCh06G015210.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006091Acyl-CoA oxidase/dehydrogenase, central domainPFAMPF02770Acyl-CoA_dh_Mcoord: 48..101
score: 5.6
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domainunknownSSF56645Acyl-CoA dehydrogenase NM domain-likecoord: 1..102
score: 3.8
IPR013786Acyl-CoA dehydrogenase/oxidase, N-terminalGENE3DG3DSA:1.10.540.10coord: 1..46
score: 1.
NoneNo IPR availableGENE3DG3DSA:2.40.110.10coord: 48..104
score: 1.7
NoneNo IPR availablePANTHERPTHR10909ELECTRON TRANSPORT OXIDOREDUCTASEcoord: 1..101
score: 5.0
NoneNo IPR availablePANTHERPTHR10909:SF282ACYL-COA DEHYDROGENASE FAMILY MEMBER 11coord: 1..101
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G015210Melon (DHL92) v3.6.1cmomedB857
CmoCh06G015210Silver-seed gourdcarcmoB0390
CmoCh06G015210Cucumber (Chinese Long) v3cmocucB0953
CmoCh06G015210Watermelon (97103) v2cmowmbB833
CmoCh06G015210Wax gourdcmowgoB1005
CmoCh06G015210Cucurbita moschata (Rifu)cmocmoB224
CmoCh06G015210Cucumber (Gy14) v1cgycmoB0718
CmoCh06G015210Cucurbita maxima (Rimu)cmacmoB271
CmoCh06G015210Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G015210Cucurbita maxima (Rimu)cmacmoB835
CmoCh06G015210Wild cucumber (PI 183967)cmocpiB814
CmoCh06G015210Cucumber (Chinese Long) v2cmocuB806
CmoCh06G015210Melon (DHL92) v3.5.1cmomeB755
CmoCh06G015210Watermelon (Charleston Gray)cmowcgB743
CmoCh06G015210Watermelon (97103) v1cmowmB793
CmoCh06G015210Cucurbita pepo (Zucchini)cmocpeB787
CmoCh06G015210Cucurbita pepo (Zucchini)cmocpeB796
CmoCh06G015210Bottle gourd (USVL1VR-Ls)cmolsiB752
CmoCh06G015210Cucumber (Gy14) v2cgybcmoB401