CmoCh06G012620 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G012620
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionProtein plastid transcriptionally active 5
LocationCmo_Chr06 : 9522718 .. 9526591 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTTCTATTCCTTCGACGTTCCTCCATTTCTCCCCTTTCTTCCGCGCTCTCCTCAATCTCTCTGCTGCATTCCAATGTCTTCCTCCATTACTCTTCCTCTCCTCAATCCTTCTCTTCACCTCACACCTCACCGCTTCTTCCCTGTTTCTCTCTCAATCTTCTCATCTCCCAAGCTCTCATCTCGTTCTTTTGCCAATTCCTTCATCTGTCGTTCTCTGAATCCCGCTAGCAACGAACGCGAGGAGGTTCGATGGATTCGTGAGGAGCAGCGATGGATTCGCGAAGAGGAACGGTGGATTCGCGAAGAGCAGCGTTGGGCCAGAGAACGCGAGTCGCTTTTGCAGGAAATTGCCGAGCTTAAGCTTCAAATTCAGGCGTTAGAACGTCAACATTCTATGCAAGGAGGGACGGTTTCGGCGTCGGAGAGTATTGCGAATATTGCCGGCTTGTTACAGGTGTTGAAGGAGAAGAATCTGATTGCCGAAAGCGGAGCGTCGGTGAGTCGCATATTGTTGGATGAGAGCACTCGTGAAGAGGACGTGGAGATAGAGAAGAAAACAATTGTTGAAGAAGTGATAGAGAATAAGGCAATTATTGAAGAAGTTGTTAGGTTTTCCGATGAGATTAAAGCAGAGAAAGAGGTGAAGAATGAGAGAAAGTCCTTGAGAATTGGTTCGGAAGGAGCGGAAGTTCTTGCGATGCAGGTCTGCTCGTCATACGCATTTCTTCTATCAAATATTAGAAGGCGAGTTTTAAGTTTTGTGCCGCTTTTGTTCCTATGATTTTGTGTCTTCCATATAATTGGATCGAATTTCATAACCAAATGCAAGCATTGTGGCAGATCAATCTGCTTATGAACGCTGTGCACTTTAGATTAATTTTAAGATTAAAAAAAAAAAGATAATATAGATTGAAGCTGGAAAAAAAAAAAATACATGAATATTATTATATGTGATAAATAGGCCCGTGAATATAGTCGATTCGACTCTGCGGTTAATGTTGAGGAATTTGTTTGTTTTTTTTTTGAAATCTAGTCTAATTGAGTCTCTATCTCTTGCACTTTTCTTTTCTTTTTCCTTTTTTTTTATTCGAAATGCGAGTACTGTCTTCCTCATTTTAGGTAGTTAAGATGCTTTAATTTTAATTTTAGTATGAAGATCGTTGTACTAAAATGTCAGGAAGCATTGCTGAGGCTAGGATTTTACTCTGGCGAAGAAGACATGGAGTTTTCAAGTTTCTCCAGTGGAACTGAGCGTGCCGTTAAGACTTGGCAAGTAAGTTACTGGCATTGACATTAGCTCATTCTATGGCATCTATACGGATTCAGTGCACATTCTTTCAATTTGAAACATCCATCGATGCATGATCCAAATGTAAATTAGAGAGTTCACTATTAAGGACTAATCAATCTCTAATATTTTGTATATATTAAATATATACGAATTTAGTACACGTTCTTTCTATTTGAAACATCCATCGATGTATGATATAAATGTAAATCAGAGAGTTCAACATTAAGGACTAACATTTTGTATAAATTAAATATGAATATAGATATTAAAGATTTATAACTTATTTAGAAAGTGAAAAAACTTCGATTATTAATTTAAGCGTGTCCTTAAAATTTTTATTTCGATATCGATATCGACATCAATATTTCAATCTTTGCTTCCAACCTATACTTTTATTTGATAGGCCACCTCAGGTTTCCGTGAAGATGGTATAATGACTGCAGAACTCCTTGAGATTTTATACGGGGAGAAAATAACTGAGAGCGTTGGATCAAATGCCAAAACAGATGAAAAAGGGAACATTCCTACAGATCAAAAAGTATGTTTGAGAACTTTTTATTATGAATCTGTATTTGGTGTGTGCATGATAGCCTTCCTTGAATTGAAATATTTGGTGATTTCTGTACATTTACTTTATGGCAACGATGAAGAATATATGTGATACTCGAGAGTGCACAGTCGAGATTTTGACCTATTTCCTTCAGTAATCAATGTGTTGCTTAGGAACCTTAACAACCTTTTTATTAGTATGTCCACGATGTTCAGATGCGAGTTTCTGTATCTTTAGAACTCTAGGACACGGCCGTACAACTTATAGAGAACAGATCCTATTAGAGGGTGCATTGCCTGCTCCATTGGTATTAACAAATTTTTCTCATCCCACTCTTCTAGAATTCCATCGAGTAAACTGATCTCGTCTTGCACAAGCAAATGGCTGTCTGCTTGAACAAAAGTTGCAACGTTTTTAAGTATCGTTCTCTCATAGAATTTGTGTCAATCATCTTGTGCGTATTGCTTTTTGTTAGTTATGCTTTCAGTAAACTTGTATGCCATTTTTTTTTGTCATTTTGTCTTCTAAATGTTGCCAATTGTAGGATTACCGTTTGTCTGGCACTGAATATTTCTAACCATTGATCTTCTACTTCAACCTTTTCACCGTTAGAGATGAGTGTTCTGTTGGATGTGGCTCATTTTAAAAAGAGAGATCATTTTAAAGAGAGGAACCTTAAGCACTTAATATTTTTCTATTCTGTTTGTTGTTGTGTTGTGTAAAGAGCATACAGGTATTTACAATGGGGAGATACTAACAAATTTTCTAAACTTTTAGCGACTACTAACAATTCTCCTTGCGAAAAAGACTAACATTTTTCTAAACTTATTAAAGTCGACAACTATTAGACAATTATCCTAAAATTGATCTAAATTAATATTTTATTTTATTTTTGGTAATTCCTTATTAGCTCACATGTTTCTTCCCGTTTTGCAGGAAGGTGCTAATGCATCTGCTGTTGTTAACTCAATAACTGAAATATCAGAGATTGAGAGGACAGTAGTAAAAGAAGGCAGCGCAAGTTTTGATGTGTCCCAACAGCGAGTTTTTCTCCTAGGAGAGAACCGATGGGAAGACCCCGCACGACTTCTTAGTTCAAATGGAAAAGCTTCTGATGGCAAAACTAAGGACACATCTCCCAAGTGTCTGACTTGTCGTGGGGAGGGTCGTCTGTTATGCTCAGGTACACATCATATCGTTATGTTTATCTTAATTCAATAATATAATATCTACCCCAACTGTATCCTTAAGCTCTAAACAGACTTCAAAACTAAGGAAATTGTCTGTCATGTCCTAAATCACTTCGATTTTAAAATTAACACGTTGAAAATATTTTAGAAGTATAATCAAATGTTACAATCATTATTGGAAGAAAAAAAAAACTTTAATAATTCTCTTATTTTTATTTTTTTTATTAATGATTCTCTAAAATATCATTTTTAACTGTCATTTGGGGAAGTGATGCTTTTGAAATTTTATCCTTTTGTCAAGTCACTCTAATATGAGCATAATGGTTCGATGATAATTGACATTTAAATCTTTCTTTGAAGTCGAAGATTCAAATCCCCATATCCTACATCTCTTCGTAAATAAATATATTTGTTAAGTGATCGATATCTCTGCTCGGCTCTACTCGGTATATAACCAGTTTTGGTTTCTCAGAATGCGATGGATCTGGTGAGCCAAATGTTGAACCACAGGTAAAGCCACCCACCCCACTAATGCACCCATCTTTATCGCCTTCAGTTTAGTTTAGAAGTGGTGGTAACTCAGAAGAATGGATTGAATTATGCAGTTTCTGGAATGGGTGGATGAAGGAGCAAAATGTCCATACTGCGAAGGCCTAGGTTATACAATATGTGACGCATGCGAAGGGAAGACTGTGAAATAGGTATGACTTTTCACTCGTCCATTTTAAATAATGGCGCTGTTAATTTAATTCTTCACTTATTAACATCCCTATTCAATTTTGTTATATATATATTACTAATTCATAGACTAAAAATAAGATGATGATTCCGTTTGGGCAGA

mRNA sequence

CACTTCTATTCCTTCGACGTTCCTCCATTTCTCCCCTTTCTTCCGCGCTCTCCTCAATCTCTCTGCTGCATTCCAATGTCTTCCTCCATTACTCTTCCTCTCCTCAATCCTTCTCTTCACCTCACACCTCACCGCTTCTTCCCTGTTTCTCTCTCAATCTTCTCATCTCCCAAGCTCTCATCTCGTTCTTTTGCCAATTCCTTCATCTGTCGTTCTCTGAATCCCGCTAGCAACGAACGCGAGGAGGTTCGATGGATTCGTGAGGAGCAGCGATGGATTCGCGAAGAGGAACGGTGGATTCGCGAAGAGCAGCGTTGGGCCAGAGAACGCGAGTCGCTTTTGCAGGAAATTGCCGAGCTTAAGCTTCAAATTCAGGCGTTAGAACGTCAACATTCTATGCAAGGAGGGACGGTTTCGGCGTCGGAGAGTATTGCGAATATTGCCGGCTTGTTACAGGTGTTGAAGGAGAAGAATCTGATTGCCGAAAGCGGAGCGTCGGTGAGTCGCATATTGTTGGATGAGAGCACTCGTGAAGAGGACGTGGAGATAGAGAAGAAAACAATTGTTGAAGAAGTGATAGAGAATAAGGCAATTATTGAAGAAGTTGTTAGGTTTTCCGATGAGATTAAAGCAGAGAAAGAGGTGAAGAATGAGAGAAAGTCCTTGAGAATTGGTTCGGAAGGAGCGGAAGTTCTTGCGATGCAGGAAGCATTGCTGAGGCTAGGATTTTACTCTGGCGAAGAAGACATGGAGTTTTCAAGTTTCTCCAGTGGAACTGAGCGTGCCGTTAAGACTTGGCAAGCCACCTCAGGTTTCCGTGAAGATGGTATAATGACTGCAGAACTCCTTGAGATTTTATACGGGGAGAAAATAACTGAGAGCGTTGGATCAAATGCCAAAACAGATGAAAAAGGGAACATTCCTACAGATCAAAAAGAAGGTGCTAATGCATCTGCTGTTGTTAACTCAATAACTGAAATATCAGAGATTGAGAGGACAGTAGTAAAAGAAGGCAGCGCAAGTTTTGATGTGTCCCAACAGCGAGTTTTTCTCCTAGGAGAGAACCGATGGGAAGACCCCGCACGACTTCTTAGTTCAAATGGAAAAGCTTCTGATGGCAAAACTAAGGACACATCTCCCAAGTGTCTGACTTGTCGTGGGGAGGGTCGTCTGTTATGCTCAGAATGCGATGGATCTGGTGAGCCAAATGTTGAACCACAGTTTCTGGAATGGGTGGATGAAGGAGCAAAATGTCCATACTGCGAAGGCCTAGGTTATACAATATGTGACGCATGCGAAGGGAAGACTGTGAAATAGGTATGACTTTTCACTCGTCCATTTTAAATAATGGCGCTGTTAATTTAATTCTTCACTTATTAACATCCCTATTCAATTTTGTTATATATATATTACTAATTCATAGACTAAAAATAAGATGATGATTCCGTTTGGGCAGA

Coding sequence (CDS)

ATGTCTTCCTCCATTACTCTTCCTCTCCTCAATCCTTCTCTTCACCTCACACCTCACCGCTTCTTCCCTGTTTCTCTCTCAATCTTCTCATCTCCCAAGCTCTCATCTCGTTCTTTTGCCAATTCCTTCATCTGTCGTTCTCTGAATCCCGCTAGCAACGAACGCGAGGAGGTTCGATGGATTCGTGAGGAGCAGCGATGGATTCGCGAAGAGGAACGGTGGATTCGCGAAGAGCAGCGTTGGGCCAGAGAACGCGAGTCGCTTTTGCAGGAAATTGCCGAGCTTAAGCTTCAAATTCAGGCGTTAGAACGTCAACATTCTATGCAAGGAGGGACGGTTTCGGCGTCGGAGAGTATTGCGAATATTGCCGGCTTGTTACAGGTGTTGAAGGAGAAGAATCTGATTGCCGAAAGCGGAGCGTCGGTGAGTCGCATATTGTTGGATGAGAGCACTCGTGAAGAGGACGTGGAGATAGAGAAGAAAACAATTGTTGAAGAAGTGATAGAGAATAAGGCAATTATTGAAGAAGTTGTTAGGTTTTCCGATGAGATTAAAGCAGAGAAAGAGGTGAAGAATGAGAGAAAGTCCTTGAGAATTGGTTCGGAAGGAGCGGAAGTTCTTGCGATGCAGGAAGCATTGCTGAGGCTAGGATTTTACTCTGGCGAAGAAGACATGGAGTTTTCAAGTTTCTCCAGTGGAACTGAGCGTGCCGTTAAGACTTGGCAAGCCACCTCAGGTTTCCGTGAAGATGGTATAATGACTGCAGAACTCCTTGAGATTTTATACGGGGAGAAAATAACTGAGAGCGTTGGATCAAATGCCAAAACAGATGAAAAAGGGAACATTCCTACAGATCAAAAAGAAGGTGCTAATGCATCTGCTGTTGTTAACTCAATAACTGAAATATCAGAGATTGAGAGGACAGTAGTAAAAGAAGGCAGCGCAAGTTTTGATGTGTCCCAACAGCGAGTTTTTCTCCTAGGAGAGAACCGATGGGAAGACCCCGCACGACTTCTTAGTTCAAATGGAAAAGCTTCTGATGGCAAAACTAAGGACACATCTCCCAAGTGTCTGACTTGTCGTGGGGAGGGTCGTCTGTTATGCTCAGAATGCGATGGATCTGGTGAGCCAAATGTTGAACCACAGTTTCTGGAATGGGTGGATGAAGGAGCAAAATGTCCATACTGCGAAGGCCTAGGTTATACAATATGTGACGCATGCGAAGGGAAGACTGTGAAATAG
Homology
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BLAST of CmoCh06G012620 vs. TrEMBL
Match: A0A0A0L7Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G132000 PE=4 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 2.2e-175
Identity = 333/413 (80.63%), Postives = 366/413 (88.62%), Query Frame = 1 

Query: 1   MSSSITLPLLNPSLHLTPHRFFPVSLSIFSSPKLSS-RSFANSFICRSLNPASNEREEVR 60
           MSSSITLPL NPSL LTP  F   SLS+FSSPKLSS RS +NS ICRSLNP+SN+REE+R
Sbjct: 1   MSSSITLPL-NPSLLLTPRAF---SLSLFSSPKLSSSRSLSNSLICRSLNPSSNDREELR 60

Query: 61  WIREEQRWIREEERWIREEQRWARERESLLQEIAELKLQIQALERQHSMQGGTVSASESI 120
           WIREEQRW REEERWIREEQRWARER+SLLQEIAELKLQIQALER++S+QGGT+S SE+I
Sbjct: 61  WIREEQRWFREEERWIREEQRWARERQSLLQEIAELKLQIQALERRNSVQGGTISVSETI 120

Query: 121 ANIAGLLQVLKEKNLIAESGASVSRILLDESTREEDVEIEKKTIVEEVIENKAIIEEVVR 180
           ANIAGLLQVLKEKNLIAESG +VSRILLDES+REEDVEIEKKTIV          EEVV+
Sbjct: 121 ANIAGLLQVLKEKNLIAESGPTVSRILLDESSREEDVEIEKKTIV----------EEVVK 180

Query: 181 FSDEIKAEKEVKNERKSLRIGSEGAEVLAMQEALLRLGFYSGEEDMEFSSFSSGTERAVK 240
           FS+E KAEKEVK ERKSLR GSEGAEVLAMQEAL+RLGFYSGEEDMEFSSFSSGTERAVK
Sbjct: 181 FSEESKAEKEVKKERKSLRTGSEGAEVLAMQEALMRLGFYSGEEDMEFSSFSSGTERAVK 240

Query: 241 TWQATSGFREDGIMTAELLEILYGEKITESVGSNAKTDEKGNIPTDQKEGANASAVVNSI 300
           TWQA SGFREDGIMT ELL+IL+ E++TESVGS+AKTDEKGNIPTDQ+ G+    V+NS+
Sbjct: 241 TWQAASGFREDGIMTTELLDILFKEEVTESVGSDAKTDEKGNIPTDQR-GSENGTVINSV 300

Query: 301 TEISEIERTVVKEGSASFDVSQQRVFLLGENRWEDPARLLSSNGKASDGKTKDTSPKCLT 360
           TEI EI++T+VKEGS SFDVSQQRVFL+GENRWEDP RL SSNGKASDGKTK  S  CLT
Sbjct: 301 TEIQEIQKTIVKEGSESFDVSQQRVFLIGENRWEDPTRLHSSNGKASDGKTKVISTNCLT 360

Query: 361 CRGEGRLLCSECDGSGEPNVEPQFLEWVDEGAKCPYCEGLGYTICDACEGKTV 413
           CRGEGRLLC+ECDG+GEPN+EPQFLEWV EG KCPYCEG+GY  CD CEGKTV
Sbjct: 361 CRGEGRLLCTECDGTGEPNIEPQFLEWVGEGTKCPYCEGVGYITCDVCEGKTV 398

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BLAST of CmoCh06G012620 vs. TrEMBL
Match: A0A067F4U7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040777mg PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 9.4e-110
Identity = 231/413 (55.93%), Postives = 292/413 (70.70%), Query Frame = 1 

Query: 1   MSSSITLPLLNPSLHLTPHRFFPVSLSIFSSPKLSSRSFANSFICRSLNPASNEREEVRW 60
           MSSS+    LNP     P   F +  +  S P L S S A+ F  R+ + +S++ EE+RW
Sbjct: 1   MSSSLIPLSLNP-----PLLSFHLHRTTCSPPLLISFSRASKFPIRATS-SSSDHEEIRW 60

Query: 61  IREEQRWIREEERWIREEQRWARERESLLQEIAELKLQIQALERQHSMQGGTVSASESIA 120
           +REEQRW+REE+RW REEQRW RERESLL+EI+ELKLQI+ALE ++   G +VS S++I+
Sbjct: 61  LREEQRWLREEQRWFREEQRWIRERESLLREISELKLQIKALENRNLSDGASVSVSDTIS 120

Query: 121 NIAGLLQVLKEKNLIAESGASVSRILLDESTREEDVEIEKKTIVEEVIENKAIIEEVVRF 180
           NIAGLLQ+LKEKN+IAE      R  + E  + E+ E +K+ +  +V+E +         
Sbjct: 121 NIAGLLQMLKEKNMIAE------RATVAEKEKFEEEEQQKEVV--KVLEGE--------- 180

Query: 181 SDEIKAEKEVKNERKSLRIGSEGAEVLAMQEALLRLGFYSGEEDMEFSSFSSGTERAVKT 240
                     K +RK+LR+GSEG +V AMQE LL+LGF+SGEEDME+SSFS+GTERAVKT
Sbjct: 181 ----------KKKRKALRVGSEGEDVKAMQEELLKLGFFSGEEDMEYSSFSTGTERAVKT 240

Query: 241 WQATSGFREDGIMTAELLEILYGEKITESVGSNAKTDEKGNIPT-DQKEGANASAVVNSI 300
           WQA  G  EDGIMT+ELLE LY E   E   +N   D+KG I T   KEG N  A + SI
Sbjct: 241 WQAAMGVTEDGIMTSELLESLYMEHRVEDNDTNMNADQKGIIQTIPPKEGTN-GAPIASI 300

Query: 301 TEISEIERTVVKEGSASFDVSQQRVFLLGENRWEDPARLLSSNGKASDGKTKDTSPKCLT 360
           TEISEI++TVVKEG+   D+S++RVFLLGENRWE+P+RL     + +  K K  + +CLT
Sbjct: 301 TEISEIKQTVVKEGATEVDLSERRVFLLGENRWEEPSRLAGRGNQDAGSKAKKATTQCLT 360

Query: 361 CRGEGRLLCSECDGSGEPNVEPQFLEWVDEGAKCPYCEGLGYTICDACEGKTV 413
           CRGEGRL+C ECDG+GEPN+EPQF+EWVDEG KCPYCEGLGYTICD CEGK V
Sbjct: 361 CRGEGRLMCLECDGTGEPNIEPQFIEWVDEGMKCPYCEGLGYTICDVCEGKAV 379

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BLAST of CmoCh06G012620 vs. TrEMBL
Match: V4SAX1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005170mg PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 1.2e-109
Identity = 230/413 (55.69%), Postives = 292/413 (70.70%), Query Frame = 1 

Query: 1   MSSSITLPLLNPSLHLTPHRFFPVSLSIFSSPKLSSRSFANSFICRSLNPASNEREEVRW 60
           MSSS+    LNP     P   F +  +  S P L S S A+ F  R+ + +S++ EE+RW
Sbjct: 1   MSSSLIPLSLNP-----PLLSFHLHRTTCSPPLLISFSRASKFPIRATS-SSSDHEEIRW 60

Query: 61  IREEQRWIREEERWIREEQRWARERESLLQEIAELKLQIQALERQHSMQGGTVSASESIA 120
           +REEQRW+REE+RW REEQRW RERESLL+EI+ELKLQI+ALE ++   G +VS S++I+
Sbjct: 61  LREEQRWLREEQRWFREEQRWIRERESLLREISELKLQIKALENRNLSDGASVSVSDTIS 120

Query: 121 NIAGLLQVLKEKNLIAESGASVSRILLDESTREEDVEIEKKTIVEEVIENKAIIEEVVRF 180
           NIAGLLQ+LKEKN+IAE      R  + E  + E+ E +K+ +  +V+E +         
Sbjct: 121 NIAGLLQMLKEKNMIAE------RATVAEKEKFEEEEQQKEVV--KVLEGE--------- 180

Query: 181 SDEIKAEKEVKNERKSLRIGSEGAEVLAMQEALLRLGFYSGEEDMEFSSFSSGTERAVKT 240
                     K +RK+LR+GSEG +V AMQE LL+LGF+SGEEDME+SSFS+GTERAVKT
Sbjct: 181 ----------KKKRKALRVGSEGEDVKAMQEELLKLGFFSGEEDMEYSSFSTGTERAVKT 240

Query: 241 WQATSGFREDGIMTAELLEILYGEKITESVGSNAKTDEKGNIPT-DQKEGANASAVVNSI 300
           WQA  G  EDGIMT+ELLE LY E   +   +N   D+KG I T   KEG N  A + SI
Sbjct: 241 WQAAMGVTEDGIMTSELLESLYMEHRVKDTDTNMNADQKGIIQTIPPKEGTN-GAPIASI 300

Query: 301 TEISEIERTVVKEGSASFDVSQQRVFLLGENRWEDPARLLSSNGKASDGKTKDTSPKCLT 360
           TEISEI++TVVKEG+   D+S++RVFLLGENRWE+P+RL     + +  K K  + +CLT
Sbjct: 301 TEISEIKQTVVKEGATEVDLSERRVFLLGENRWEEPSRLAGRGNQDAGSKAKKATTQCLT 360

Query: 361 CRGEGRLLCSECDGSGEPNVEPQFLEWVDEGAKCPYCEGLGYTICDACEGKTV 413
           CRGEGRL+C ECDG+GEPN+EPQF+EWVDEG KCPYCEGLGYTICD CEGK V
Sbjct: 361 CRGEGRLMCLECDGTGEPNIEPQFIEWVDEGMKCPYCEGLGYTICDVCEGKAV 379

[Close]
BLAST of CmoCh06G012620 vs. TrEMBL
Match: A0A061EJW9_THECC (Plastid transcriptionally active 5, putative isoform 1 OS=Theobroma cacao GN=TCM_020352 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 5.7e-107
Identity = 231/417 (55.40%), Postives = 292/417 (70.02%), Query Frame = 1 

Query: 1   MSSSITLPLLNPSLHLTPHRFFPVSLSIFSSPKLSSRSFANSFIC--RSLNPASNEREEV 60
           M+S I L    P LH     F   S  +  SP       +  F+C   S N ++ +REE 
Sbjct: 1   MTSLIPLSFHPPFLHFNSRSFPSKSFPLSPSP-------SKLFLCFSSSTNSSNFDREES 60

Query: 61  RWIREEQRWIREEERWIREEQRWARERESLLQEIAELKLQIQALERQHSMQGGTVSASES 120
           RW+REEQRW+REE+RW+REE+RW  E+E LL++I+ELKLQIQALE ++S+QG +VS  E+
Sbjct: 61  RWLREEQRWLREEQRWLREEKRWLNEKEFLLRQISELKLQIQALENRNSVQGASVS--ET 120

Query: 121 IANIAGLLQVLKEKNLIAESGASVSRILLDESTREEDVEIEKKTIVEEVIENKAIIEEVV 180
           I++I  LLQVLKEKN IA+SG S S ++L                 EEV E + ++EE V
Sbjct: 121 ISSIGALLQVLKEKNRIADSGESTSEMVL-----------------EEVKEKEVVVEEGV 180

Query: 181 RFSDEIKAEKEVKNERKSLRIGSEGAEVLAMQEALLRLGFYSGEEDMEFSSFSSGTERAV 240
           R     + E+E K ERK+LR+GSEG +V  MQEAL +LGFYSGEEDMEFSSFSSGTERAV
Sbjct: 181 RVLARREKEEEKKIERKALRVGSEGEQVREMQEALEKLGFYSGEEDMEFSSFSSGTERAV 240

Query: 241 KTWQATSGFREDGIMTAELLEILY-GEKITESVGSNAKTDEKGNIPT-DQKEGANASAVV 300
           KTWQAT G REDGIM+AELL+ L+ G++I  S       D +   PT  +KE  N +A+ 
Sbjct: 241 KTWQATVGAREDGIMSAELLQRLFTGQQIKSS-------DHEVAPPTVPEKEQTNGAAIA 300

Query: 301 NSITEISEIERTVVKE-GSASFDVSQQRVFLLGENRWEDPARLLSSNGKASDGKTKDTSP 360
            S+TEISEI++ VVKE G    +VSQ RVFLLGENRWE+P+RL   + KA + K +D++ 
Sbjct: 301 -SLTEISEIQQEVVKEEGFTQAEVSQHRVFLLGENRWEEPSRLAGKDKKAMESKNRDSTT 360

Query: 361 KCLTCRGEGRLLCSECDGSGEPNVEPQFLEWVDEGAKCPYCEGLGYTICDACEGKTV 413
           +C  CRGEGRL+C+ECDG+GEPNVEPQFLEWV+EGA CPYCEGLGYTICD C+GK V
Sbjct: 361 RCHACRGEGRLMCTECDGTGEPNVEPQFLEWVEEGANCPYCEGLGYTICDVCQGKAV 383

[Close]
BLAST of CmoCh06G012620 vs. TrEMBL
Match: A0A067KT40_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01143 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.8e-106
Identity = 236/419 (56.32%), Postives = 286/419 (68.26%), Query Frame = 1 

Query: 1   MSSSITLPL-LNPSLHLTPHRFFPVSLSIFSSPKLSSRSFANSFICRSL---NPASNERE 60
           MSS  +LPL LNP + L  H+   +S   F     S  S + S IC S    N    +R+
Sbjct: 1   MSSCSSLPLPLNPPISLYHHKLHALSPLPFFKHTFSL-SLSKSHICFSSSLPNSPIPDRD 60

Query: 61  EVRWIREEQRWIREEERWIREEQRWARERESLLQEIAELKLQIQALERQHSMQGGTVSAS 120
           ++ W+REEQRW+REE+RW+REEQRW RERESLL EI  LKLQIQALE+Q S Q   +   
Sbjct: 61  DILWLREEQRWLREEQRWLREEQRWLRERESLLAEIQSLKLQIQALEKQISTQEVDL-VP 120

Query: 121 ESIANIAGLLQVLKEKNLIAESGASVSRILLDESTREEDVEIEKKTIVEEVIENKAIIEE 180
           E+IAN++ LLQVL EKN IAESG+S   I+L E   +                    ++E
Sbjct: 121 EAIANVSALLQVLTEKNRIAESGSSSRPIVLGEKVED--------------------VKE 180

Query: 181 VVRFSDEIKAEKEVKNERKSLRIGSEGAEVLAMQEALLRLGFYSGEEDMEFSSFSSGTER 240
           V + S     E+E    RK+LR GSEG +V  MQEAL +LGFYSGEEDME+SSFSSGTER
Sbjct: 181 VSKVS-----EREEDQTRKALRKGSEGEDVREMQEALQKLGFYSGEEDMEYSSFSSGTER 240

Query: 241 AVKTWQATSGFREDGIMTAELLEILYGEK-ITESVGSNAKTDEK-GNIPTDQKEGANASA 300
           AVKTWQAT G  EDGIMTAELL+ LY E+ I     SN   D+K   +   +KEGAN +A
Sbjct: 241 AVKTWQATLGTTEDGIMTAELLDRLYMEQQIQGGTRSNVSIDQKESTLTVSRKEGANGAA 300

Query: 301 VVNSITEISEIERTVVKE-GSASFDVSQQRVFLLGENRWEDPARLLSSNGKASDGKTKDT 360
           V  S+TEISE +  VVKE G+   +VSQ RVFLLGENRWE+P+RL+  +      KTK+T
Sbjct: 301 VT-SVTEISEKQHKVVKEEGATEVEVSQHRVFLLGENRWEEPSRLIGRDKHVHVSKTKET 360

Query: 361 SPKCLTCRGEGRLLCSECDGSGEPNVEPQFLEWVDEGAKCPYCEGLGYTICDACEGKTV 413
           + KCL+CRGEGRLLC+ECDG+GEPN+EPQFLEWVDEG KCPYCEGLGYTICD CEGKT+
Sbjct: 361 TSKCLSCRGEGRLLCTECDGTGEPNIEPQFLEWVDEGTKCPYCEGLGYTICDVCEGKTM 391

[Close]
BLAST of CmoCh06G012620 vs. TAIR10
Match: AT4G13670.1 (AT4G13670.1 plastid transcriptionally active 5)

HSP 1 Score: 378.3 bits (970), Expect = 6.3e-105
Identity = 226/414 (54.59%), Postives = 290/414 (70.05%), Query Frame = 1 

Query: 2   SSSITLPLLNPSLHLTPH-RFFPVSLS--IFSSPKLSSRSFANSFICRSL-NPASNEREE 61
           SSS+ L L  P   LT   R  P   S   FS P        +S +C S  NP   +REE
Sbjct: 3   SSSLPLSLPFPLRSLTSTTRSLPFQCSPLFFSIP--------SSIVCFSTQNP---DREE 62

Query: 62  VRWIREEQRWIREEERWIREEQRWARERESLLQEIAELKLQIQALERQHSMQGGTVSASE 121
           VRW+REEQRWIREE+RWIREEQRW RERESLLQEI++L+L+IQ+LE ++S  G ++   +
Sbjct: 63  VRWLREEQRWIREEQRWIREEQRWIRERESLLQEISDLQLRIQSLESRNSQLGNSIP--D 122

Query: 122 SIANIAGLLQVLKEKNLIAESGASVSRILLDESTREEDVEIEKKTIVEEVIENKAIIEEV 181
           +I+NIA LLQVLKEKN I+ESG S + ++L ESTRE+ VE      VEE  +   I EE 
Sbjct: 123 TISNIAALLQVLKEKNRISESGLSATPMVL-ESTREQIVE-----EVEEEEKRVIIAEEK 182

Query: 182 VRFSDEIKAEKEVKNERKSLRIGSEGAEVLAMQEALLRLGFYSGEEDMEFSSFSSGTERA 241
           VR S+ +K     K +R+ L++GSEG +V A+QEALL+LGFYSGEEDMEFSSFSSGT  A
Sbjct: 183 VRVSEPVK-----KIKRRILKVGSEGDDVQALQEALLKLGFYSGEEDMEFSSFSSGTASA 242

Query: 242 VKTWQATSGFREDGIMTAELLEILYGEKITESVGSNAKTDEKGNIPTDQKEGANASAVVN 301
           VKTWQA+ G REDG+MTAELL+ L+ ++  E+        +K    T +KE A   AV  
Sbjct: 243 VKTWQASLGVREDGVMTAELLQRLFMDEDVET--------DKDEASTMKKEEAGNGAVFT 302

Query: 302 SITEISEIERTVVKEGS-ASFDVSQQRVFLLGENRWEDPARLLSSNGKASDGKTKDTSPK 361
           S+T++ E ++++VK+ S    DV+Q RVFLLGENRWEDP+RL+  N      ++ +T  +
Sbjct: 303 SVTQVPEKKQSIVKDQSDREVDVTQNRVFLLGENRWEDPSRLIGRNKPVDRSESTNTKTR 362

Query: 362 CLTCRGEGRLLCSECDGSGEPNVEPQFLEWVDEGAKCPYCEGLGYTICDACEGK 411
           C+TCRGEGRL+C ECDG+GEPN+EPQF+EWV E  KCPYCEGLGYT+CD C+GK
Sbjct: 363 CITCRGEGRLMCLECDGTGEPNIEPQFMEWVGEDTKCPYCEGLGYTVCDVCDGK 384

[Close]
BLAST of CmoCh06G012620 vs. NCBI nr
Match: gi|778677894|ref|XP_011650882.1| (PREDICTED: uncharacterized protein LOC101215886 [Cucumis sativus])

HSP 1 Score: 623.2 bits (1606), Expect = 3.2e-175
Identity = 333/413 (80.63%), Postives = 366/413 (88.62%), Query Frame = 1 

Query: 1   MSSSITLPLLNPSLHLTPHRFFPVSLSIFSSPKLSS-RSFANSFICRSLNPASNEREEVR 60
           MSSSITLPL NPSL LTP  F   SLS+FSSPKLSS RS +NS ICRSLNP+SN+REE+R
Sbjct: 1   MSSSITLPL-NPSLLLTPRAF---SLSLFSSPKLSSSRSLSNSLICRSLNPSSNDREELR 60

Query: 61  WIREEQRWIREEERWIREEQRWARERESLLQEIAELKLQIQALERQHSMQGGTVSASESI 120
           WIREEQRW REEERWIREEQRWARER+SLLQEIAELKLQIQALER++S+QGGT+S SE+I
Sbjct: 61  WIREEQRWFREEERWIREEQRWARERQSLLQEIAELKLQIQALERRNSVQGGTISVSETI 120

Query: 121 ANIAGLLQVLKEKNLIAESGASVSRILLDESTREEDVEIEKKTIVEEVIENKAIIEEVVR 180
           ANIAGLLQVLKEKNLIAESG +VSRILLDES+REEDVEIEKKTIV          EEVV+
Sbjct: 121 ANIAGLLQVLKEKNLIAESGPTVSRILLDESSREEDVEIEKKTIV----------EEVVK 180

Query: 181 FSDEIKAEKEVKNERKSLRIGSEGAEVLAMQEALLRLGFYSGEEDMEFSSFSSGTERAVK 240
           FS+E KAEKEVK ERKSLR GSEGAEVLAMQEAL+RLGFYSGEEDMEFSSFSSGTERAVK
Sbjct: 181 FSEESKAEKEVKKERKSLRTGSEGAEVLAMQEALMRLGFYSGEEDMEFSSFSSGTERAVK 240

Query: 241 TWQATSGFREDGIMTAELLEILYGEKITESVGSNAKTDEKGNIPTDQKEGANASAVVNSI 300
           TWQA SGFREDGIMT ELL+IL+ E++TESVGS+AKTDEKGNIPTDQ+ G+    V+NS+
Sbjct: 241 TWQAASGFREDGIMTTELLDILFKEEVTESVGSDAKTDEKGNIPTDQR-GSENGTVINSV 300

Query: 301 TEISEIERTVVKEGSASFDVSQQRVFLLGENRWEDPARLLSSNGKASDGKTKDTSPKCLT 360
           TEI EI++T+VKEGS SFDVSQQRVFL+GENRWEDP RL SSNGKASDGKTK  S  CLT
Sbjct: 301 TEIQEIQKTIVKEGSESFDVSQQRVFLIGENRWEDPTRLHSSNGKASDGKTKVISTNCLT 360

Query: 361 CRGEGRLLCSECDGSGEPNVEPQFLEWVDEGAKCPYCEGLGYTICDACEGKTV 413
           CRGEGRLLC+ECDG+GEPN+EPQFLEWV EG KCPYCEG+GY  CD CEGKTV
Sbjct: 361 CRGEGRLLCTECDGTGEPNIEPQFLEWVGEGTKCPYCEGVGYITCDVCEGKTV 398

[Close]
BLAST of CmoCh06G012620 vs. NCBI nr
Match: gi|659075864|ref|XP_008438372.1| (PREDICTED: uncharacterized protein LOC103483490 [Cucumis melo])

HSP 1 Score: 617.1 bits (1590), Expect = 2.3e-173
Identity = 330/413 (79.90%), Postives = 363/413 (87.89%), Query Frame = 1 

Query: 1   MSSSITLPLLNPSLHLTPHRFFPVSLSIFSSPKLSS-RSFANSFICRSLNPASNEREEVR 60
           MSSSITLPL NPSL LTP     +SLS+FSSPK SS RS +NS ICRSLNPASN+REE+R
Sbjct: 1   MSSSITLPL-NPSLLLTPRA---LSLSVFSSPKFSSSRSLSNSLICRSLNPASNDREELR 60

Query: 61  WIREEQRWIREEERWIREEQRWARERESLLQEIAELKLQIQALERQHSMQGGTVSASESI 120
           WIREEQRW REEERWIREEQRWARER+ LLQEIAELKLQIQALER++S+QGGT+S SE+I
Sbjct: 61  WIREEQRWFREEERWIREEQRWARERQLLLQEIAELKLQIQALERRNSVQGGTISVSETI 120

Query: 121 ANIAGLLQVLKEKNLIAESGASVSRILLDESTREEDVEIEKKTIVEEVIENKAIIEEVVR 180
           ANIAGLLQVLKEKNLIAESG +VSRILLDES+REEDVEIEKKTIV          EEVV+
Sbjct: 121 ANIAGLLQVLKEKNLIAESGPTVSRILLDESSREEDVEIEKKTIV----------EEVVK 180

Query: 181 FSDEIKAEKEVKNERKSLRIGSEGAEVLAMQEALLRLGFYSGEEDMEFSSFSSGTERAVK 240
           FS+E KAEKEVK ERKSLR+GSEGAEVLAMQEALL LGFY GEEDMEFSSFSSGTERAVK
Sbjct: 181 FSEESKAEKEVKKERKSLRVGSEGAEVLAMQEALLGLGFYCGEEDMEFSSFSSGTERAVK 240

Query: 241 TWQATSGFREDGIMTAELLEILYGEKITESVGSNAKTDEKGNIPTDQKEGANASAVVNSI 300
           TWQ+ SGFREDGIMT ELLEIL+ EK+TESVGS+AKTDEKGNIPTDQ+ G+    V+NSI
Sbjct: 241 TWQSASGFREDGIMTTELLEILFKEKVTESVGSDAKTDEKGNIPTDQR-GSENGTVINSI 300

Query: 301 TEISEIERTVVKEGSASFDVSQQRVFLLGENRWEDPARLLSSNGKASDGKTKDTSPKCLT 360
           TEI EI++T+VKEGSA  D+S+QRVFL+GENRWEDP RL SSNGKASDGKTK  S  CLT
Sbjct: 301 TEIQEIQKTIVKEGSAGLDLSEQRVFLIGENRWEDPTRLHSSNGKASDGKTKVISTNCLT 360

Query: 361 CRGEGRLLCSECDGSGEPNVEPQFLEWVDEGAKCPYCEGLGYTICDACEGKTV 413
           CRGEGRLLC+ECDG+GEPN+EPQFLEWVDEG KCPYCEG+GY  CD CEGKTV
Sbjct: 361 CRGEGRLLCTECDGTGEPNIEPQFLEWVDEGMKCPYCEGVGYITCDVCEGKTV 398

[Close]
BLAST of CmoCh06G012620 vs. NCBI nr
Match: gi|1009140106|ref|XP_015887471.1| (PREDICTED: uncharacterized protein LOC107422524 [Ziziphus jujuba])

HSP 1 Score: 419.9 bits (1078), Expect = 5.3e-114
Identity = 250/414 (60.39%), Postives = 311/414 (75.12%), Query Frame = 1 

Query: 1   MSSSITLPLLNPSLHLTPHRFFPVSLSIFSSPKLS-SRSFANSFICRSLNPASNEREEVR 60
           MSSS+ L  LNP +H   ++  P S SI SS   S S SF++     S + + ++REE +
Sbjct: 1   MSSSLIL-FLNPPIH-HQNKPLPFSSSISSSSSFSHSLSFSSHVCFSSFSSSHSDREEQQ 60

Query: 61  WIREEQRWIREEERWIREEQRWARERESLLQEIAELKLQIQALERQHSMQGGTVSASESI 120
           W+REEQRW+REE+RW+REEQRWARER+SLL++I++L+ +IQALERQ S+Q G  S SE+I
Sbjct: 61  WLREEQRWLREEQRWLREEQRWARERDSLLRQISDLQFRIQALERQLSVQEG-ASMSETI 120

Query: 121 ANIAGLLQVLKEKNLIAESGASVSRILLDESTREEDVEIEKKTIVEEVIENKAIIEEVVR 180
           A+IAGLLQVLK+K+LIAE+G S S         E+  E EKK   EEV+    ++E+V+R
Sbjct: 121 ASIAGLLQVLKDKSLIAETGLSTSTSTSPMVLEEKKSEEEKKE--EEVV----VVEKVIR 180

Query: 181 FSDEIKAEKEVKNERKSLRIGSEGAEVLAMQEALLRLGFYSGEEDMEFSSFSSGTERAVK 240
             D  + +K  K +R SLR GSEG EV +MQEALL+LGFYSGEEDMEFSSFSSGTERAVK
Sbjct: 181 VED-AEGKKVEKKKRSSLRKGSEGEEVRSMQEALLKLGFYSGEEDMEFSSFSSGTERAVK 240

Query: 241 TWQATSGFREDGIMTAELLEILYGEKITESVGSNAKTDEKGNIPTD-QKEGANASAVVNS 300
           TWQA+ G  EDGIMT +LLE L+ E+I  S GSN KTD K N P D  KEG N +A+  S
Sbjct: 241 TWQASLGAPEDGIMTEQLLERLFVEQIGGS-GSNLKTD-KNNSPVDTPKEGTNGAAIA-S 300

Query: 301 ITEISEIERTVVK-EGSASFDVSQQRVFLLGENRWEDPARLLSSNGKASDGKTKDTSPKC 360
            TEIS++++ +VK EG A  D+S QRVFLLGENRWE+P+RL   N K  + KTK ++ KC
Sbjct: 301 FTEISKVQQKIVKDEGVAEVDLSHQRVFLLGENRWEEPSRLGRDN-KNGESKTKQSTTKC 360

Query: 361 LTCRGEGRLLCSECDGSGEPNVEPQFLEWVDEGAKCPYCEGLGYTICDACEGKT 412
           L+CRGEGRLLC ECDG+GEPN+EPQFLEWVDEGAKCPYC+GLGYTICD CEGK+
Sbjct: 361 LSCRGEGRLLCMECDGTGEPNIEPQFLEWVDEGAKCPYCDGLGYTICDVCEGKS 400

[Close]
BLAST of CmoCh06G012620 vs. NCBI nr
Match: gi|568881734|ref|XP_006493707.1| (PREDICTED: golgin subfamily A member 6-like protein 6 isoform X2 [Citrus sinensis])

HSP 1 Score: 405.6 bits (1041), Expect = 1.0e-109
Identity = 230/413 (55.69%), Postives = 293/413 (70.94%), Query Frame = 1 

Query: 1   MSSSITLPLLNPSLHLTPHRFFPVSLSIFSSPKLSSRSFANSFICRSLNPASNEREEVRW 60
           MSSS+    LNP     P   F +  +  S P L S S A+ F  R+ + +S++ EE+RW
Sbjct: 1   MSSSLIPLSLNP-----PLLSFHLHRTTSSPPPLISFSRASKFPIRATS-SSSDHEEIRW 60

Query: 61  IREEQRWIREEERWIREEQRWARERESLLQEIAELKLQIQALERQHSMQGGTVSASESIA 120
           +REEQRW+REE+RW+REEQRW RERESLL+EI+ELKLQI+ALE ++   G +VS S++I+
Sbjct: 61  LREEQRWLREEQRWLREEQRWIRERESLLREISELKLQIKALENRNLSDGASVSVSDTIS 120

Query: 121 NIAGLLQVLKEKNLIAESGASVSRILLDESTREEDVEIEKKTIVEEVIENKAIIEEVVRF 180
           NIAGLLQ+LKEKN+IAE      R  + E  + E+ E +K+ +  +V+E +         
Sbjct: 121 NIAGLLQMLKEKNMIAE------RATVAEKEKFEEEEQQKEVV--KVLEGE--------- 180

Query: 181 SDEIKAEKEVKNERKSLRIGSEGAEVLAMQEALLRLGFYSGEEDMEFSSFSSGTERAVKT 240
                     K +RK+LR+GSEG +V AMQE LL+LGF+S EEDME+SSFS+GTERAVKT
Sbjct: 181 ----------KKKRKALRVGSEGEDVKAMQEELLKLGFFSSEEDMEYSSFSTGTERAVKT 240

Query: 241 WQATSGFREDGIMTAELLEILYGEKITESVGSNAKTDEKGNIPT-DQKEGANASAVVNSI 300
           WQA  G  EDGIMT+ELLE LY E   E   +N   D+KG I T  +KEG N  A + SI
Sbjct: 241 WQAAKGVTEDGIMTSELLERLYMEHRVEDTDTNMNADQKGIIQTIPRKEGPN-GAPIASI 300

Query: 301 TEISEIERTVVKEGSASFDVSQQRVFLLGENRWEDPARLLSSNGKASDGKTKDTSPKCLT 360
           TEISEI++TVVKEG+   D+S++RVFLLGENRWE+P+RL     + +  K K  + +CLT
Sbjct: 301 TEISEIKQTVVKEGATEVDLSERRVFLLGENRWEEPSRLAGRGNQDAGSKAKKATTQCLT 360

Query: 361 CRGEGRLLCSECDGSGEPNVEPQFLEWVDEGAKCPYCEGLGYTICDACEGKTV 413
           CRGEGRL+C ECDG+GEPN+EPQF+EWVDEG KCPYCEGLGYTICD CEGK V
Sbjct: 361 CRGEGRLMCLECDGTGEPNIEPQFIEWVDEGMKCPYCEGLGYTICDVCEGKAV 379

[Close]
BLAST of CmoCh06G012620 vs. NCBI nr
Match: gi|641842228|gb|KDO61135.1| (hypothetical protein CISIN_1g040777mg [Citrus sinensis])

HSP 1 Score: 405.2 bits (1040), Expect = 1.4e-109
Identity = 231/413 (55.93%), Postives = 292/413 (70.70%), Query Frame = 1 

Query: 1   MSSSITLPLLNPSLHLTPHRFFPVSLSIFSSPKLSSRSFANSFICRSLNPASNEREEVRW 60
           MSSS+    LNP     P   F +  +  S P L S S A+ F  R+ + +S++ EE+RW
Sbjct: 1   MSSSLIPLSLNP-----PLLSFHLHRTTCSPPLLISFSRASKFPIRATS-SSSDHEEIRW 60

Query: 61  IREEQRWIREEERWIREEQRWARERESLLQEIAELKLQIQALERQHSMQGGTVSASESIA 120
           +REEQRW+REE+RW REEQRW RERESLL+EI+ELKLQI+ALE ++   G +VS S++I+
Sbjct: 61  LREEQRWLREEQRWFREEQRWIRERESLLREISELKLQIKALENRNLSDGASVSVSDTIS 120

Query: 121 NIAGLLQVLKEKNLIAESGASVSRILLDESTREEDVEIEKKTIVEEVIENKAIIEEVVRF 180
           NIAGLLQ+LKEKN+IAE      R  + E  + E+ E +K+ +  +V+E +         
Sbjct: 121 NIAGLLQMLKEKNMIAE------RATVAEKEKFEEEEQQKEVV--KVLEGE--------- 180

Query: 181 SDEIKAEKEVKNERKSLRIGSEGAEVLAMQEALLRLGFYSGEEDMEFSSFSSGTERAVKT 240
                     K +RK+LR+GSEG +V AMQE LL+LGF+SGEEDME+SSFS+GTERAVKT
Sbjct: 181 ----------KKKRKALRVGSEGEDVKAMQEELLKLGFFSGEEDMEYSSFSTGTERAVKT 240

Query: 241 WQATSGFREDGIMTAELLEILYGEKITESVGSNAKTDEKGNIPT-DQKEGANASAVVNSI 300
           WQA  G  EDGIMT+ELLE LY E   E   +N   D+KG I T   KEG N  A + SI
Sbjct: 241 WQAAMGVTEDGIMTSELLESLYMEHRVEDNDTNMNADQKGIIQTIPPKEGTN-GAPIASI 300

Query: 301 TEISEIERTVVKEGSASFDVSQQRVFLLGENRWEDPARLLSSNGKASDGKTKDTSPKCLT 360
           TEISEI++TVVKEG+   D+S++RVFLLGENRWE+P+RL     + +  K K  + +CLT
Sbjct: 301 TEISEIKQTVVKEGATEVDLSERRVFLLGENRWEEPSRLAGRGNQDAGSKAKKATTQCLT 360

Query: 361 CRGEGRLLCSECDGSGEPNVEPQFLEWVDEGAKCPYCEGLGYTICDACEGKTV 413
           CRGEGRL+C ECDG+GEPN+EPQF+EWVDEG KCPYCEGLGYTICD CEGK V
Sbjct: 361 CRGEGRLMCLECDGTGEPNIEPQFIEWVDEGMKCPYCEGLGYTICDVCEGKAV 379

The following BLAST results are available for this feature:
BLAST of CmoCh06G012620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh06G012620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7Z4_CUCSA2.2e-17580.63Uncharacterized protein OS=Cucumis sativus GN=Csa_3G132000 PE=4 SV=1[more]
A0A067F4U7_CITSI9.4e-11055.93Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040777mg PE=4 SV=1[more]
V4SAX1_9ROSI1.2e-10955.69Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005170mg PE=4 SV=1[more]
A0A061EJW9_THECC5.7e-10755.40Plastid transcriptionally active 5, putative isoform 1 OS=Theobroma cacao GN=TCM... [more]
A0A067KT40_JATCU2.8e-10656.32Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01143 PE=4 SV=1[more]
BLAST of CmoCh06G012620 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G13670.16.3e-10554.59 plastid transcriptionally active 5[more]
BLAST of CmoCh06G012620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778677894|ref|XP_011650882.1|3.2e-17580.63PREDICTED: uncharacterized protein LOC101215886 [Cucumis sativus][more]
gi|659075864|ref|XP_008438372.1|2.3e-17379.90PREDICTED: uncharacterized protein LOC103483490 [Cucumis melo][more]
gi|1009140106|ref|XP_015887471.1|5.3e-11460.39PREDICTED: uncharacterized protein LOC107422524 [Ziziphus jujuba][more]
gi|568881734|ref|XP_006493707.1|1.0e-10955.69PREDICTED: golgin subfamily A member 6-like protein 6 isoform X2 [Citrus sinensi... [more]
gi|641842228|gb|KDO61135.1|1.4e-10955.93hypothetical protein CISIN_1g040777mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001305HSP_DnaJ_Cys-rich_dom
IPR002477Peptidoglycan-bd-like
Vocabulary: Molecular Function
TermDefinition
GO:0031072heat shock protein binding
GO:0051082unfolded protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009658 chloroplast organization
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009408 response to heat
biological_process GO:0009416 response to light stimulus
biological_process GO:0042793 transcription from plastid promoter
cellular_component GO:0005575 cellular_component
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0042644 chloroplast nucleoid
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009508 plastid chromosome
cellular_component GO:0000427 plastid-encoded plastid RNA polymerase complex
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G012620.1CmoCh06G012620.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001305Heat shock protein DnaJ, cysteine-rich domainGENE3DG3DSA:2.10.230.10coord: 353..412
score: 2.
IPR001305Heat shock protein DnaJ, cysteine-rich domainunknownSSF57938DnaJ/Hsp40 cysteine-rich domaincoord: 356..411
score: 4.8
IPR002477Peptidoglycan binding-likeGENE3DG3DSA:1.10.101.10coord: 193..262
score: 1.0
IPR002477Peptidoglycan binding-likePFAMPF01471PG_binding_1coord: 203..261
score: 4.0
IPR002477Peptidoglycan binding-likeunknownSSF47090PGBD-likecoord: 195..261
score: 3.92
NoneNo IPR availableunknownCoilCoilcoord: 78..105
scor
NoneNo IPR availablePANTHERPTHR15852FAMILY NOT NAMEDcoord: 4..115
score: 4.3E-157coord: 185..412
score: 4.3E
NoneNo IPR availablePANTHERPTHR15852:SF16SUBFAMILY NOT NAMEDcoord: 185..412
score: 4.3E-157coord: 4..115
score: 4.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh06G012620Cucsa.256360Cucumber (Gy14) v1cgycmoB0718
CmoCh06G012620CmaCh06G012520Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G012620Cla021429Watermelon (97103) v1cmowmB793
CmoCh06G012620Csa3G132000Cucumber (Chinese Long) v2cmocuB806
CmoCh06G012620MELO3C006321Melon (DHL92) v3.5.1cmomeB755
CmoCh06G012620ClCG05G003410Watermelon (Charleston Gray)cmowcgB743
CmoCh06G012620CSPI03G10980Wild cucumber (PI 183967)cmocpiB814
CmoCh06G012620Cp4.1LG03g18110Cucurbita pepo (Zucchini)cmocpeB787
CmoCh06G012620Cp4.1LG08g02890Cucurbita pepo (Zucchini)cmocpeB796
CmoCh06G012620MELO3C006321.2Melon (DHL92) v3.6.1cmomedB857
CmoCh06G012620CsaV3_3G011080Cucumber (Chinese Long) v3cmocucB0953
CmoCh06G012620Cla97C05G084070Watermelon (97103) v2cmowmbB833
CmoCh06G012620Bhi01G000029Wax gourdcmowgoB1010
CmoCh06G012620CsGy3G011030Cucumber (Gy14) v2cgybcmoB401
CmoCh06G012620Carg06284Silver-seed gourdcarcmoB1288
CmoCh06G012620Carg24754Silver-seed gourdcarcmoB0244
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G012620Watermelon (97103) v2cmowmbB837
CmoCh06G012620Watermelon (97103) v2cmowmbB841
CmoCh06G012620Wax gourdcmowgoB0995
CmoCh06G012620Wax gourdcmowgoB1019
CmoCh06G012620Cucurbita moschata (Rifu)cmocmoB224
CmoCh06G012620Cucurbita moschata (Rifu)cmocmoB308
CmoCh06G012620Cucurbita moschata (Rifu)cmocmoB437
CmoCh06G012620Cucurbita moschata (Rifu)cmocmoB484
CmoCh06G012620Cucurbita maxima (Rimu)cmacmoB271
CmoCh06G012620Cucurbita maxima (Rimu)cmacmoB362
CmoCh06G012620Cucurbita maxima (Rimu)cmacmoB622
CmoCh06G012620Cucurbita maxima (Rimu)cmacmoB910
CmoCh06G012620Wild cucumber (PI 183967)cmocpiB829
CmoCh06G012620Melon (DHL92) v3.5.1cmomeB752
CmoCh06G012620Watermelon (Charleston Gray)cmowcgB746
CmoCh06G012620Watermelon (Charleston Gray)cmowcgB750
CmoCh06G012620Watermelon (97103) v1cmowmB802
CmoCh06G012620Watermelon (97103) v1cmowmB791
CmoCh06G012620Cucurbita pepo (Zucchini)cmocpeB765
CmoCh06G012620Cucurbita pepo (Zucchini)cmocpeB777
CmoCh06G012620Bottle gourd (USVL1VR-Ls)cmolsiB733
CmoCh06G012620Bottle gourd (USVL1VR-Ls)cmolsiB757
CmoCh06G012620Bottle gourd (USVL1VR-Ls)cmolsiB761
CmoCh06G012620Cucumber (Gy14) v2cgybcmoB416
CmoCh06G012620Melon (DHL92) v3.6.1cmomedB854
CmoCh06G012620Silver-seed gourdcarcmoB0322
CmoCh06G012620Silver-seed gourdcarcmoB1058
CmoCh06G012620Silver-seed gourdcarcmoB1451
CmoCh06G012620Cucumber (Chinese Long) v3cmocucB0967