CmoCh06G012600 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G012600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr06 : 9515149 .. 9515808 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCTTTTTCTCTGCGGTTTGCGGCGTTTTGCTTCTGTTTGTTGATTGCTTTGGTCGGAGCTAACAATGTAGAAGACGACAAGCGGTTCTTTCATCGCCCACTTGGTTATTTTAAGGGTAAAGGGTTCCATGGAGGAGGTCTCGGTGGTGGTGGCGGTTTTGGTGGCGGCGGAGGCGGAGGTTTTGGCGGTGGGTATGGTGGAGGAGGTGGGTTGGGCGGTGGCGGAGGGTTCGGGCATGGTATTCATAAAAAGGGTTTTAGACATGGAGGATTGAGCGGCGGTGGAGGGTTGGGTGGTGGTGGAGGGTTAGGCGGAGGAGGTGGTTTGGGTGGAGGTGGAGGGATAGGGCATGGCATTTACAAGAGAGGTTTTAAGCATAGAAGATTTGGAGGTGGTGGTGGTGGTCTTGGTGGCGGTGGAGGATATGGAGGAGGAGGTGGTCTTGGCGGCGGTGGAGGACTTGGAGGTGGTGGTGGAGGCGGTCTGGGAGGAGGAGTTGGCGGTGGGTATGGAGGAGGTGCCGGGGGAGGCTTTGGTGGCGGATTCGGAGGAGGAGCAGGCGGGGGAGGTGGTCTCGGTGGAGGTGGAGGCTTTGGTGGAGGAGGCGGTTACGGCGGAGGAGCAGGATTTGGCGGCGGCGGCGGCCACCACTAA

mRNA sequence

ATGGCGTCTTTTTCTCTGCGGTTTGCGGCGTTTTGCTTCTGTTTGTTGATTGCTTTGGTCGGAGCTAACAATGTAGAAGACGACAAGCGGTTCTTTCATCGCCCACTTGGTTATTTTAAGGGTAAAGGGTTCCATGGAGGAGGTCTCGGTGGTGGTGGCGGTTTTGGTGGCGGCGGAGGCGGAGGTTTTGGCGGTGGGTATGGTGGAGGAGGTGGGTTGGGCGGTGGCGGAGGGTTCGGGCATGGTATTCATAAAAAGGGTTTTAGACATGGAGGATTGAGCGGCGGTGGAGGGTTGGGTGGTGGTGGAGGGTTAGGCGGAGGAGGTGGTTTGGGTGGAGGTGGAGGGATAGGGCATGGCATTTACAAGAGAGGTTTTAAGCATAGAAGATTTGGAGGTGGTGGTGGTGGTCTTGGTGGCGGTGGAGGATATGGAGGAGGAGGTGGTCTTGGCGGCGGTGGAGGACTTGGAGGTGGTGGTGGAGGCGGTCTGGGAGGAGGAGTTGGCGGTGGGTATGGAGGAGGTGCCGGGGGAGGCTTTGGTGGCGGATTCGGAGGAGGAGCAGGCGGGGGAGGTGGTCTCGGTGGAGGTGGAGGCTTTGGTGGAGGAGGCGGTTACGGCGGAGGAGCAGGATTTGGCGGCGGCGGCGGCCACCACTAA

Coding sequence (CDS)

ATGGCGTCTTTTTCTCTGCGGTTTGCGGCGTTTTGCTTCTGTTTGTTGATTGCTTTGGTCGGAGCTAACAATGTAGAAGACGACAAGCGGTTCTTTCATCGCCCACTTGGTTATTTTAAGGGTAAAGGGTTCCATGGAGGAGGTCTCGGTGGTGGTGGCGGTTTTGGTGGCGGCGGAGGCGGAGGTTTTGGCGGTGGGTATGGTGGAGGAGGTGGGTTGGGCGGTGGCGGAGGGTTCGGGCATGGTATTCATAAAAAGGGTTTTAGACATGGAGGATTGAGCGGCGGTGGAGGGTTGGGTGGTGGTGGAGGGTTAGGCGGAGGAGGTGGTTTGGGTGGAGGTGGAGGGATAGGGCATGGCATTTACAAGAGAGGTTTTAAGCATAGAAGATTTGGAGGTGGTGGTGGTGGTCTTGGTGGCGGTGGAGGATATGGAGGAGGAGGTGGTCTTGGCGGCGGTGGAGGACTTGGAGGTGGTGGTGGAGGCGGTCTGGGAGGAGGAGTTGGCGGTGGGTATGGAGGAGGTGCCGGGGGAGGCTTTGGTGGCGGATTCGGAGGAGGAGCAGGCGGGGGAGGTGGTCTCGGTGGAGGTGGAGGCTTTGGTGGAGGAGGCGGTTACGGCGGAGGAGCAGGATTTGGCGGCGGCGGCGGCCACCACTAA

Homology

[Close]

BLAST of CmoCh06G012600 vs. TrEMBL
Match: A0A0A0L443_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G131980 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.4e-18
Identity = 165/282 (58.51%), Postives = 176/282 (62.41%), Query Frame = 1


Query: 1   MASFSLRFAAFCFCLLIALVGA-NNVEDDKRFFHRPLGYFKGK----------------G 60
           MA FSLR   FCFC+LIALV A NNVED+K  FHRPLG++KG+                G
Sbjct: 1   MARFSLRAVVFCFCVLIALVAADNNVEDNKGLFHRPLGFYKGRKRFRGGGLGGGIGGGGG 60

Query: 61  FHGG-----------GLGGGGGFGGG--------------------------GGGGFGGG 120
           F GG           GLGGGGGFGGG                          GGG     
Sbjct: 61  FGGGAGGGGGLGGGGGLGGGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGG----- 120

Query: 121 YGGGGGLGGGGGFGHGIHKKGFRHGGLSGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGF 180
                GLGGGGG GHGI+K+G++       GGLGGGGGLGGGGGLGGGGG+GHGIYKRGF
Sbjct: 121 -----GLGGGGGLGHGIYKRGYKR------GGLGGGGGLGGGGGLGGGGGLGHGIYKRGF 180

Query: 181 KHRRFG-----GGGGGLGGGGGYGGGGGLGGGGGLGG----GGGGGLGGGVGGGYGGGA- 218
           K    G     GGGGGLGGGGG GGGGGLGGGGGLGG    GGGGGLGGG GGG+GGG  
Sbjct: 181 KRGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGGGFGGGGG 240

[Close]

BLAST of CmoCh06G012600 vs. TrEMBL
Match: M4E295_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.6e-07
Identity = 148/224 (66.07%), Postives = 155/224 (69.20%), Query Frame = 1


Query: 11  FCFCLLIALV-GANNVEDDKRFFHRPLGYFKGKGFH-----GGGLGGGGGF--GGGGGGG 70
           F F L+   V G   V+DDK  FH+P  +F  KGF      GGGLGGGGG   GGG GG 
Sbjct: 13  FVFALVAEFVFGHVEVKDDKHLFHKPRPFFHKKGFRKGLGGGGGLGGGGGLGGGGGLGG- 72

Query: 71  FGGGYGGGGGLGGGGGFGHGIHKKGFRHGGLSGGGGLGGGGGLGGGGGLGGGGGIGHGIY 130
            GGG GGGGGLGGGGG G G        GGL GGGGLGGGGGLG GGGLGGGGG+G G  
Sbjct: 73  -GGGLGGGGGLGGGGGLGGG--------GGLGGGGGLGGGGGLGHGGGLGGGGGLGGG-- 132

Query: 131 KRGFKHRRFGGGGGGLGGGGGYGGGGGLGGGGGLGGGGGGGLGGGVGGGYGGGAGGGFGG 190
             G  H      GGGLGGGGG GGGGGLGGGGGL  GGGGGLGGG GGGYGGGAGGG GG
Sbjct: 133 -GGLGH------GGGLGGGGGVGGGGGLGGGGGL--GGGGGLGGGAGGGYGGGAGGGLGG 192

Query: 191 GFGGGAGGGGGLGGGGGFGGGGGYGGGAGFG-------GGGGHH 220
             GGGAGGGGG GGGGG+GGGGG+GGGAG G       GGGGHH
Sbjct: 193 --GGGAGGGGGFGGGGGYGGGGGFGGGAGGGGGFGGGYGGGGHH 213

[Close]

BLAST of CmoCh06G012600 vs. TrEMBL
Match: A0A078DBM9_BRANA (BnaA03g15020D protein OS=Brassica napus GN=BnaA03g15020D PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-06
Identity = 139/222 (62.61%), Postives = 146/222 (65.77%), Query Frame = 1


Query: 10  AFCFCLLIALV-----GANNVEDDKRFFHRPLGYFKGKGFHGGGLGGGGGFGGGGGGGFG 69
           A  F  + ALV     G   V+DDK  FH+P  +F  KGF  G LGGGGG GGGGG G G
Sbjct: 8   ACVFIFVFALVAEFAFGHVEVKDDKHLFHKPRPFFHKKGFRKG-LGGGGGLGGGGGLGGG 67

Query: 70  GGYGGGGGLGGGGGFGHGIHKKGFRHGGLSGGGGLGGGGGLGGGGGLGGGGGIGHGIYKR 129
           GG GGGGGLGGGGG G              GGGGLGGGGGLGGGGGLGGGGG+GHG    
Sbjct: 68  GGLGGGGGLGGGGGLG--------------GGGGLGGGGGLGGGGGLGGGGGLGHG---- 127

Query: 130 GFKHRRFGGGGGGLGGGGGYGGGGGLGGGGGLGGGGGGGLGGGVGGGYGGGAGGGFGGGF 189
                      GGLGGGGG GGGGGLG      GGGGGGLGGG GGGYGGGAGGG GG  
Sbjct: 128 -----------GGLGGGGGLGGGGGLG-----HGGGGGGLGGGAGGGYGGGAGGGLGG-- 187

Query: 190 GGGAGGGGGLGGGGGFGGGGGYGGGAGFG-------GGGGHH 220
           GGGAGGGGG GGGGG+GGGGG+GGGAG G       GGGGHH
Sbjct: 188 GGGAGGGGGFGGGGGYGGGGGFGGGAGGGGGFGGGYGGGGHH 192

[Close]

BLAST of CmoCh06G012600 vs. TrEMBL
Match: A0A0D3B4J7_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.0e-06
Identity = 108/143 (75.52%), Postives = 110/143 (76.92%), Query Frame = 1


Query: 84  HKKGFRHGGLSGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKHRRFGGGGGGLGGGGG 143
           HKKGFR G L GGGGLGGGGGLGGGGGLGGGGG+GHG               GGLGGGGG
Sbjct: 43  HKKGFRKG-LGGGGGLGGGGGLGGGGGLGGGGGLGHG---------------GGLGGGGG 102

Query: 144 YGGGGGLGGGGGLGGGGGGGLGGGVGGGYGGGAGGGFGGGFGGGAGGGGGLGGGGGFGGG 203
            GGGGGLGGGGGLGGGGGGGLGGG GGGYGGGAGGG GG  GGGAGGGGG GGGGG+GGG
Sbjct: 103 LGGGGGLGGGGGLGGGGGGGLGGGAGGGYGGGAGGGLGG--GGGAGGGGGFGGGGGYGGG 162

Query: 204 GGYGGGAGFG-------GGGGHH 220
           GG GGGAG G       GGGGHH
Sbjct: 163 GGLGGGAGGGGGFGGGYGGGGHH 167

[Close]

BLAST of CmoCh06G012600 vs. NCBI nr
Match: gi|659077739|ref|XP_008439359.1| (PREDICTED: glycine-rich cell wall structural protein-like [Cucumis melo])

HSP 1 Score: 111.7 bits (278), Expect = 1.6e-21
Identity = 162/229 (70.74%), Postives = 174/229 (75.98%), Query Frame = 1


Query: 1   MASFSLRFAAFCFCLLIALVGA-NNVEDDKRFFHRPLGYFKGK-----GFHGGGLGGGGG 60
           MA FSLR   FCFC+LIA VGA NNVED+K  FHRPLG+ KG+     G  GGG+GGGGG
Sbjct: 1   MACFSLRAVVFCFCVLIAFVGADNNVEDNKGLFHRPLGFIKGRKRFRGGGLGGGIGGGGG 60

Query: 61  FGGGGGGGFGGGYGGGGGLGGGGGFGHGIHKKGFRHGGLSGGGGLGGGGGLGGGGGLGGG 120
           FGGG GGGFGG  G GGG GGGGG G G        GGL GGGGLGGGGGLGGGGGLGGG
Sbjct: 61  FGGGAGGGFGG--GAGGGFGGGGGLGGG--------GGLGGGGGLGGGGGLGGGGGLGGG 120

Query: 121 GGIGHGIYKRGFKHRRFGGGGGGLGGGGGYGGGGGLGGGGGLGGGGGGGLGGGVGGGYGG 180
           GG+GHGI+KRG+K        GGLGGGGG GGGGGLGGGGGL GG GGG GGG GGG+GG
Sbjct: 121 GGLGHGIHKRGYKR-------GGLGGGGGLGGGGGLGGGGGL-GGVGGGYGGGAGGGFGG 180

Query: 181 GAGGGFGGGF--GGGAGGGGGLGG--GGGFGGGGGYGGGAGFGGGGGHH 220
           G G G GGGF  GGGAGGGGG+GG  GGGFGGGGG+GGG G+  GGGHH
Sbjct: 181 GGGAGGGGGFGGGGGAGGGGGIGGGAGGGFGGGGGFGGGGGY--GGGHH 209

[Close]

BLAST of CmoCh06G012600 vs. NCBI nr
Match: gi|778688443|ref|XP_011652751.1| (PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis sativus])

HSP 1 Score: 100.1 bits (248), Expect = 4.9e-18
Identity = 165/282 (58.51%), Postives = 176/282 (62.41%), Query Frame = 1


Query: 1   MASFSLRFAAFCFCLLIALVGA-NNVEDDKRFFHRPLGYFKGK----------------G 60
           MA FSLR   FCFC+LIALV A NNVED+K  FHRPLG++KG+                G
Sbjct: 1   MARFSLRAVVFCFCVLIALVAADNNVEDNKGLFHRPLGFYKGRKRFRGGGLGGGIGGGGG 60

Query: 61  FHGG-----------GLGGGGGFGGG--------------------------GGGGFGGG 120
           F GG           GLGGGGGFGGG                          GGG     
Sbjct: 61  FGGGAGGGGGLGGGGGLGGGGGFGGGAGGGGGLGGGGGLGGGGGLGGGGGLGGGG----- 120

Query: 121 YGGGGGLGGGGGFGHGIHKKGFRHGGLSGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGF 180
                GLGGGGG GHGI+K+G++       GGLGGGGGLGGGGGLGGGGG+GHGIYKRGF
Sbjct: 121 -----GLGGGGGLGHGIYKRGYKR------GGLGGGGGLGGGGGLGGGGGLGHGIYKRGF 180

Query: 181 KHRRFG-----GGGGGLGGGGGYGGGGGLGGGGGLGG----GGGGGLGGGVGGGYGGGA- 218
           K    G     GGGGGLGGGGG GGGGGLGGGGGLGG    GGGGGLGGG GGG+GGG  
Sbjct: 181 KRGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGGGFGGGGG 240

[Close]

BLAST of CmoCh06G012600 vs. NCBI nr
Match: gi|685283915|ref|XP_009132861.1| (PREDICTED: glycine-rich cell wall structural protein-like isoform X1 [Brassica rapa])

HSP 1 Score: 68.2 bits (165), Expect = 2.1e-08
Identity = 148/228 (64.91%), Postives = 155/228 (67.98%), Query Frame = 1


Query: 11  FCFCLLIALV-GANNVEDDKRFFHRPLGYFKGKGFH-----GGGLGGGGGFG-----GGG 70
           F F L+   V G   V+DDK  FH+P  +F  KGF      GGGLGGGGG G     GGG
Sbjct: 13  FVFALVAEFVFGHVEVKDDKHLFHKPRPFFHKKGFRKGLGGGGGLGGGGGLGGGGGLGGG 72

Query: 71  GG-GFGGGYGGGGGLGGGGGFGHGIHKKGFRHGGLSGGGGLGGGGGLGGGGGLGGGGGIG 130
           GG G GGG GGGGGLGGGGG G G        GGL GGGGLG GGGLGGGGGLGGGGG+G
Sbjct: 73  GGLGGGGGLGGGGGLGGGGGLGGG--------GGLGGGGGLGHGGGLGGGGGLGGGGGLG 132

Query: 131 HGIYKRGFKHRRFGGGGGGLGGGGGYGGGGGLGGGGGLGGGGGGGLGGGVGGGYGGGAGG 190
           H               GGGLGGGGG GGGGGLGGGGGL  GGGGGLGGG GGGYGGGAGG
Sbjct: 133 H---------------GGGLGGGGGVGGGGGLGGGGGL--GGGGGLGGGAGGGYGGGAGG 192

Query: 191 GFGGGFGGGAGGGGGLGGGGGFGGGGGYGGGAGFG-------GGGGHH 220
           G GG  GGGAGGGGG GGGGG+GGGGG+GGGAG G       GGGGHH
Sbjct: 193 GLGG--GGGAGGGGGFGGGGGYGGGGGFGGGAGGGGGFGGGYGGGGHH 213

[Close]

BLAST of CmoCh06G012600 vs. NCBI nr
Match: gi|685283918|ref|XP_009132862.1| (PREDICTED: glycine-rich cell wall structural protein-like isoform X2 [Brassica rapa])

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-08
Identity = 142/217 (65.44%), Postives = 149/217 (68.66%), Query Frame = 1


Query: 11  FCFCLLIALV-GANNVEDDKRFFHRPLGYFKGKGFHGGGLGGGGGFGGGGGGGFGGGYGG 70
           F F L+   V G   V+DDK  FH+P  +F  KGF  G LGGGGG  GG     GGG GG
Sbjct: 13  FVFALVAEFVFGHVEVKDDKHLFHKPRPFFHKKGFRKG-LGGGGGL-GG-----GGGLGG 72

Query: 71  GGGLGGGGGFGHGIHKKGFRHGGLSGGGGLGGGGGLGGGGGLGGGGGIGHGIYKRGFKHR 130
           GGGLGGGGG G G        GGL GGGGLGGGGGLGGGGGLGGGGG+GH          
Sbjct: 73  GGGLGGGGGLGGG--------GGLGGGGGLGGGGGLGGGGGLGGGGGLGH---------- 132

Query: 131 RFGGGGGGLGGGGGYGGGGGLGGGGGLGGGGGGGLGGGVGGGYGGGAGGGFGGGFGGGAG 190
                GGGLGGGGG GGGGGLGGGGGL  GGGGGLGGG GGGYGGGAGGG GG  GGGAG
Sbjct: 133 -----GGGLGGGGGVGGGGGLGGGGGL--GGGGGLGGGAGGGYGGGAGGGLGG--GGGAG 192

Query: 191 GGGGLGGGGGFGGGGGYGGGAGFG-------GGGGHH 220
           GGGG GGGGG+GGGGG+GGGAG G       GGGGHH
Sbjct: 193 GGGGFGGGGGYGGGGGFGGGAGGGGGFGGGYGGGGHH 195

[Close]

BLAST of CmoCh06G012600 vs. NCBI nr
Match: gi|923568584|ref|XP_013739004.1| (PREDICTED: glycine-rich cell wall structural protein 1 [Brassica napus])

HSP 1 Score: 64.7 bits (156), Expect = 2.3e-07
Identity = 142/233 (60.94%), Postives = 148/233 (63.52%), Query Frame = 1


Query: 10  AFCFCLLIALV-----GANNVEDDKRFFHRPLGYFKGKGFH------------------- 69
           A  F  + ALV     G   V+DDK  FH+P  +F  KGF                    
Sbjct: 8   ACVFIFVFALVAEFAFGHVEVKDDKHLFHKPRPFFHKKGFRKGLGGGGGLGGGGGLGGGG 67

Query: 70  ----GGGLGGGGGFGGGGGGGFGGGYGGGGGLGGGGGFGHGIHKKGFRHGGLSGGGGLGG 129
               GGGLGGGGG GGGGG G GGG GGGGGLGGGGG GHG        GGL GGGGLGG
Sbjct: 68  GLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGGGGGLGHG--------GGLGGGGGLGG 127

Query: 130 GGGLGGGGGLGGGGGIGHGIYKRGFKHRRFGGGGGGLGGGGGYGGGGGLGGGGGLGGGGG 189
           GGGLG GGGLGGGGG+G G    G  H    GGGGGLGGGGG GGGGGL        GGG
Sbjct: 128 GGGLGHGGGLGGGGGLGGG---GGLGHGGGLGGGGGLGGGGGLGGGGGL--------GGG 187

Query: 190 GGLGGGVGGGYGGGAGGGFGGGFGGGAGGGGGLGGGGGFGGGGGYGGGAGFGG 215
           GGLGGG GGGYGGGAGGG GG  GGGAGGGGG GGGGG+GGGGG GGGAG GG
Sbjct: 188 GGLGGGAGGGYGGGAGGGLGG--GGGAGGGGGFGGGGGYGGGGGLGGGAGGGG 219

The following BLAST results are available for this feature:

BLAST of CmoCh06G012600 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh06G012600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L443_CUCSA	3.4e-18	58.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G131980 PE=4 SV=1	[more]
M4E295_BRARP	3.6e-07	66.07	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
A0A078DBM9_BRANA	1.0e-06	62.61	BnaA03g15020D protein OS=Brassica napus GN=BnaA03g15020D PE=4 SV=1	[more]
A0A0D3B4J7_BRAOL	3.0e-06	75.52	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]

BLAST of CmoCh06G012600 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmoCh06G012600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077739\|ref\|XP_008439359.1\|	1.6e-21	70.74	PREDICTED: glycine-rich cell wall structural protein-like [Cucumis melo]	[more]
gi\|778688443\|ref\|XP_011652751.1\|	4.9e-18	58.51	PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis sativus]	[more]
gi\|685283915\|ref\|XP_009132861.1\|	2.1e-08	64.91	PREDICTED: glycine-rich cell wall structural protein-like isoform X1 [Brassica r...	[more]
gi\|685283918\|ref\|XP_009132862.1\|	2.7e-08	65.44	PREDICTED: glycine-rich cell wall structural protein-like isoform X2 [Brassica r...	[more]
gi\|923568584\|ref\|XP_013739004.1\|	2.3e-07	60.94	PREDICTED: glycine-rich cell wall structural protein 1 [Brassica napus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G012600.1	CmoCh06G012600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 131..141 score: 2.8E-8coord: 41..52 score: 2.8E-8coord: 159..177 score: 2.8E-8coord: 100..115 score: 2.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G012600	Cla021427	Watermelon (97103) v1	cmowmB793

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G012600	Cucurbita moschata (Rifu)	cmocmoB224
CmoCh06G012600	Cucurbita moschata (Rifu)	cmocmoB308
CmoCh06G012600	Cucurbita moschata (Rifu)	cmocmoB437
CmoCh06G012600	Cucurbita moschata (Rifu)	cmocmoB484
CmoCh06G012600	Cucumber (Gy14) v1	cgycmoB0718
CmoCh06G012600	Cucurbita maxima (Rimu)	cmacmoB271
CmoCh06G012600	Cucurbita maxima (Rimu)	cmacmoB362
CmoCh06G012600	Cucurbita maxima (Rimu)	cmacmoB622
CmoCh06G012600	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G012600	Cucurbita maxima (Rimu)	cmacmoB910
CmoCh06G012600	Wild cucumber (PI 183967)	cmocpiB829
CmoCh06G012600	Wild cucumber (PI 183967)	cmocpiB814
CmoCh06G012600	Cucumber (Chinese Long) v2	cmocuB806
CmoCh06G012600	Melon (DHL92) v3.5.1	cmomeB752
CmoCh06G012600	Melon (DHL92) v3.5.1	cmomeB755
CmoCh06G012600	Watermelon (Charleston Gray)	cmowcgB743
CmoCh06G012600	Watermelon (Charleston Gray)	cmowcgB746
CmoCh06G012600	Watermelon (Charleston Gray)	cmowcgB750
CmoCh06G012600	Watermelon (97103) v1	cmowmB802
CmoCh06G012600	Watermelon (97103) v1	cmowmB791
CmoCh06G012600	Cucurbita pepo (Zucchini)	cmocpeB765
CmoCh06G012600	Cucurbita pepo (Zucchini)	cmocpeB777
CmoCh06G012600	Cucurbita pepo (Zucchini)	cmocpeB787
CmoCh06G012600	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G012600	Bottle gourd (USVL1VR-Ls)	cmolsiB733
CmoCh06G012600	Bottle gourd (USVL1VR-Ls)	cmolsiB757
CmoCh06G012600	Bottle gourd (USVL1VR-Ls)	cmolsiB761
CmoCh06G012600	Cucumber (Gy14) v2	cgybcmoB401
CmoCh06G012600	Cucumber (Gy14) v2	cgybcmoB416
CmoCh06G012600	Melon (DHL92) v3.6.1	cmomedB854
CmoCh06G012600	Melon (DHL92) v3.6.1	cmomedB857
CmoCh06G012600	Silver-seed gourd	carcmoB0244
CmoCh06G012600	Silver-seed gourd	carcmoB0322
CmoCh06G012600	Silver-seed gourd	carcmoB1058
CmoCh06G012600	Silver-seed gourd	carcmoB1288
CmoCh06G012600	Silver-seed gourd	carcmoB1451
CmoCh06G012600	Cucumber (Chinese Long) v3	cmocucB0953
CmoCh06G012600	Cucumber (Chinese Long) v3	cmocucB0967
CmoCh06G012600	Watermelon (97103) v2	cmowmbB833
CmoCh06G012600	Watermelon (97103) v2	cmowmbB837
CmoCh06G012600	Watermelon (97103) v2	cmowmbB841
CmoCh06G012600	Wax gourd	cmowgoB0995
CmoCh06G012600	Wax gourd	cmowgoB1006
CmoCh06G012600	Wax gourd	cmowgoB1019