CmoCh06G010200 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G010200
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	B0616E02-H0507E05.1 protein
Location	Cmo_Chr06 : 8001417 .. 8002493 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAATTTTCCTCGCTTTGGCCGTTCACGACAACGTCCTTCCGTGACGGCGCCGCCAGTTCTCCCTACCTCACTGCCGGCTACACAACTCGATCCTAAAATTGCCTCGATGAATCTGATGGGACTTTGTGAGGTTGAAGTACCTCCACTCAAACTGCCGACGATCGAATTAAAGAAGAAGCCGGCGCCGGAGCCGGCTTCTCCTTTGAAATCATCTCCCCACTGGCTTCCTTCTCCTGCGAAGAAACCCATGTCACCCATTGCGTCGCCAAAATATGGATCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTACTATCGCCTCCGGTTTCACCTGCAAAGAAATATCCCGACAGGTGGATAGCCCAAACATCCCCACTTCAGTCGCCGTCAAGGTCGCTGCGAACATCGCCGCCGCCGCCGCCGCCGCCTCTTGCTCTGCCGCCTACCCAGTTCACCGCCGTTAATGGAACCACCACTCAACCCAAGTATTAAATTACCTAAAAGAGTTTAAGCTTAATTAATTTTAGTTTATTAAATTTATATTTTATTATTACAACCATACATAAAATTTTCTTCTTATAATCATTAAATAAATAAATTACAAAATAATTATTTACTCATATGGTCAGGATTCAGCCGGAGATAGAGCAGAAAAGCATTGTGTACAACAAGACGGTCGAGAAGCCGGCGAAGTTTGATCGGGCGTCAGAGTACGGCTCCGGAAAGCCACACGAAAAGCAGAAGGCAGCGGAGGCTATAAACCTCGCCGGACATAACGTTGGCGCAGTCATGGAAATAGATAAGTCATCGGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAGGCAGCGTCCGTGATGGAAATGAGGAGAAGAAAAAGAAGGAAAAGAAGGAATTGCCGATGACCGCATTTACGAACAGCAACTTTCAGAGTGTAAACAATTCTGTTCTGTACGGCTCGTCGTGTAACCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGCTGATGGGCGCAAGAATTACAAGGCGTAG

mRNA sequence

ATGTCAAATTTTCCTCGCTTTGGCCGTTCACGACAACGTCCTTCCGTGACGGCGCCGCCAGTTCTCCCTACCTCACTGCCGGCTACACAACTCGATCCTAAAATTGCCTCGATGAATCTGATGGGACTTTGTGAGGTTGAAGTACCTCCACTCAAACTGCCGACGATCGAATTAAAGAAGAAGCCGGCGCCGGAGCCGGCTTCTCCTTTGAAATCATCTCCCCACTGGCTTCCTTCTCCTGCGAAGAAACCCATGTCACCCATTGCGTCGCCAAAATATGGATCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTACTATCGCCTCCGGTTTCACCTGCAAAGAAATATCCCGACAGGTGGATAGCCCAAACATCCCCACTTCAGTCGCCGTCAAGGTCGCTGCGAACATCGCCGCCGCCGCCGCCGCCGCCTCTTGCTCTGCCGCCTACCCAGTTCACCGCCGTTAATGGAACCACCACTCAACCCAAGATTCAGCCGGAGATAGAGCAGAAAAGCATTGTGTACAACAAGACGGTCGAGAAGCCGGCGAAGTTTGATCGGGCGTCAGAGTACGGCTCCGGAAAGCCACACGAAAAGCAGAAGGCAGCGGAGGCTATAAACCTCGCCGGACATAACGTTGGCGCAGTCATGGAAATAGATAAGTCATCGGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAGGCAGCGTCCGTGATGGAAATGAGGAGAAGAAAAAGAAGGAAAAGAAGGAATTGCCGATGACCGCATTTACGAACAGCAACTTTCAGAGTGTAAACAATTCTGTTCTGTACGGCTCGTCGTGTAACCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGCTGATGGGCGCAAGAATTACAAGGCGTAG

Coding sequence (CDS)

ATGTCAAATTTTCCTCGCTTTGGCCGTTCACGACAACGTCCTTCCGTGACGGCGCCGCCAGTTCTCCCTACCTCACTGCCGGCTACACAACTCGATCCTAAAATTGCCTCGATGAATCTGATGGGACTTTGTGAGGTTGAAGTACCTCCACTCAAACTGCCGACGATCGAATTAAAGAAGAAGCCGGCGCCGGAGCCGGCTTCTCCTTTGAAATCATCTCCCCACTGGCTTCCTTCTCCTGCGAAGAAACCCATGTCACCCATTGCGTCGCCAAAATATGGATCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTACTATCGCCTCCGGTTTCACCTGCAAAGAAATATCCCGACAGGTGGATAGCCCAAACATCCCCACTTCAGTCGCCGTCAAGGTCGCTGCGAACATCGCCGCCGCCGCCGCCGCCGCCTCTTGCTCTGCCGCCTACCCAGTTCACCGCCGTTAATGGAACCACCACTCAACCCAAGATTCAGCCGGAGATAGAGCAGAAAAGCATTGTGTACAACAAGACGGTCGAGAAGCCGGCGAAGTTTGATCGGGCGTCAGAGTACGGCTCCGGAAAGCCACACGAAAAGCAGAAGGCAGCGGAGGCTATAAACCTCGCCGGACATAACGTTGGCGCAGTCATGGAAATAGATAAGTCATCGGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAGGCAGCGTCCGTGATGGAAATGAGGAGAAGAAAAAGAAGGAAAAGAAGGAATTGCCGATGACCGCATTTACGAACAGCAACTTTCAGAGTGTAAACAATTCTGTTCTGTACGGCTCGTCGTGTAACCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGCTGATGGGCGCAAGAATTACAAGGCGTAG

Homology

[Close]

BLAST of CmoCh06G010200 vs. TrEMBL
Match: A0A0A0L320_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.1e-53
Identity = 151/319 (47.34%), Postives = 191/319 (59.87%), Query Frame = 1


Query: 1   MSNFPRFGRSRQRPSVTAPPVLPTSLPATQLDPKIASMNLMGLCEVEVPPLKLPTIELKK 60
           M+N PR GR+RQR S   PPV   + PA  ++PK  +M                      
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQPA--VEPKYETMPYA-----------------TS 60

Query: 61  KPAPEPASPLKSSPHWLPSPAKKPMSPIASPKYGSSVTRVPSPPPPKDELLSPPVSPAKK 120
              P PASP + SP  L SP+KK  SP AS        RV S P  K    SPP S   K
Sbjct: 61  ITTPAPASPRRESPRPLSSPSKKATSPFAS--------RVDSSPAAK-ATRSPPDSIGDK 120

Query: 121 YPDRWIAQTSPLQSPSRSLRTSPPPPPPPLALPPTQFTAVNGTTTQPKIQPEIEQKSIVY 180
           Y +R   +T+P  +P++S R +   P  PLALP +Q    NGTT QP++QPE+E K IVY
Sbjct: 121 YLERRNGETTPPLTPAKS-RPAKTSPLSPLALPRSQVITGNGTTAQPRVQPEVETKGIVY 180

Query: 181 NKTV-EKPAKFDRASEYGSGKP-HEKQKAAEAINLAGHNVGAVMEIDKSSVGHRLGGETV 240
           NK   EKP+K +R SE+GSGK  H+KQ+    + L GHNVGAVME++KSS G+RLGGET+
Sbjct: 181 NKAADEKPSKSNRQSEHGSGKSVHQKQQKPGVMKLKGHNVGAVMEVNKSSAGYRLGGETL 240

Query: 241 RGSVRD--------GNEEKKKKEKKELPMTAFTNSNFQSVNNSVLYGSSCNHRDPGLHLK 300
           +    +        G+E+KK   KK+ P++AF NSNFQSVNNS+L+ SSC HRDPGLHL 
Sbjct: 241 KKKETEDDGDVDGYGHEDKKTGRKKKPPISAFMNSNFQSVNNSLLFDSSCQHRDPGLHLS 290

Query: 301 FADAADGDGAAADGRKNYK 310
           F +AADG GA  DG K+YK
Sbjct: 301 FPNAADGGGAVVDGDKSYK 290

[Close]

BLAST of CmoCh06G010200 vs. TrEMBL
Match: A0A0A0L5T3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.7e-27
Identity = 123/319 (38.56%), Postives = 153/319 (47.96%), Query Frame = 1


Query: 1   MSNFPRFGRSRQRPSVTAPPVLPTSLPATQLDPKIASMNLMGLCEVEVPPLKLPTIELKK 60
           MSN PRFGR   R S      LP    AT+ +P+          E EV P  +PT    +
Sbjct: 1   MSNLPRFGRQWNRFSS-----LPRPGTATRPEPQ----PFTAATEPEVFPSAVPTTNTFQ 60

Query: 61  KPAPEPASPLKSSPHWLPSPAKKPMSPIASPKYGSSVT---RVPSPPPPK------DELL 120
                  SP+K     L SP KK  SP +SPKY  + T   R P  PPP       +   
Sbjct: 61  ------TSPIKQRTPRLSSPVKKFSSPPSSPKYSGAGTVSPRKPLSPPPVHNRYEGERRT 120

Query: 121 SPPVSPAKKYPDRWIAQTSPLQSPSRSLRTSPPP---PPPPLALPPTQFTAVNGTTTQPK 180
           S   SP    P       SP  SPS+   ++ P    P  PLALP +Q       + +P+
Sbjct: 121 SATTSPKTFKP----THISPPPSPSKPRHSTVPTAVAPLSPLALPRSQVRREPEHSLRPR 180

Query: 181 IQPEIEQKSIVYNKTV-EKPAKFD---RASEYGSGKPHEKQK----AAEAINLAGHNVGA 240
             PEIEQK I+Y  T  EKP K D   +  EYG+ KP +KQ+     ++ IN+ G NVGA
Sbjct: 181 SPPEIEQKKILYQTTTTEKPTKTDHYRQNDEYGASKPQQKQQHQQLQSDVINIKGENVGA 240

Query: 241 VMEIDKSSVGHRLGGETVRGSVRDGNEEKKKKEKKELPMTAFTNSNFQSVNNSVLYGSSC 300
           VM I +SS G  +  +         NEEK  K     P  +F NSNFQ VNNS+LY SS 
Sbjct: 241 VMHITQSSDGSEVIKKKPTVGQSKENEEKTNKSNSNYPGKSFMNSNFQGVNNSILYNSSL 300

[Close]

BLAST of CmoCh06G010200 vs. TrEMBL
Match: A0A0A0L8G8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119310 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-23
Identity = 122/317 (38.49%), Postives = 161/317 (50.79%), Query Frame = 1


Query: 1   MSNFPRFGRSRQRPSVTAPPVLPTSLPATQLDPKIASMNLMGLCEVEVPPLKLPTIELKK 60
           M+N PR+GR R R S T   + PT+  + Q +P           E E+ PL  PTI+  +
Sbjct: 1   MANLPRYGR-RWRLS-TVSRLAPTATQSVQ-EP-----------EPEILPLA-PTIQTLQ 60

Query: 61  KPAPEP---ASPLKSSPHWLPSPAKKPMSPIASPKYGSSVTRVPSPPPPKDELLSPPVSP 120
              P P   A+P  S+P     P  +   P ASPKY ++V R  S  PP     SPPVSP
Sbjct: 61  PFEPTPPAAAAPPSSTPG---EPTPRISPPAASPKYEATVIREAS--PPLKPARSPPVSP 120

Query: 121 AKKYPD-RWIAQTSPLQSPSRSLRTSPPPPPPPLALPPTQFTAVNGTTTQPKIQPEIEQK 180
            +K  D R     +  Q P +  R    P    LALP     + + TT    I+PE+EQK
Sbjct: 121 PRKSVDPRHSISPNSYQEPLKPTR----PSLSTLALP----KSADVTTVPSAIKPEVEQK 180

Query: 181 SIVYNKTVEKPAKFDRASEYGSGKPHEKQKAAEAINLAGHNVGAVMEI----DKSSVGHR 240
           +  + K+       DR  +  S KP    + A+AINL G N+GAVM+I    DK S G  
Sbjct: 181 TDSFKKS-------DRQVDNVSAKPPPSLQ-AKAINLTGDNIGAVMKINQFSDKISGGEV 240

Query: 241 LGGETVRGSVRDGNEEKKKKEKKELPMTAFTNSNFQSVNNSVLYGSSCNHRDPGLHLKFA 300
                 +  V+  N+ +K + + E PMT  TNSNFQ VNNSV+Y SSC+ RDPGLHL F+
Sbjct: 241 TRKIETKTGVQQENDMEKSRRETEFPMTPITNSNFQEVNNSVMYNSSCSGRDPGLHLDFS 280

Query: 301 DAADGDGAAADGRKNYK 310
              D + A  DG K  K
Sbjct: 301 GQKD-EAATVDGNKKSK 280

[Close]

BLAST of CmoCh06G010200 vs. TrEMBL
Match: A0A061DS56_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_005083 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13
Identity = 105/350 (30.00%), Postives = 152/350 (43.43%), Query Frame = 1


Query: 14  PSVTAPPVLPT-SLPATQLDPKIASMNLMGLCEVEVPPLKLPTIELKKKPAPEPASPLKS 73
           PS  A PV  T S+P +   P +       +  V   P K P + +    A  P+SP K+
Sbjct: 128 PSSPAKPVATTASVPTSPAKPVVT------IASVPTSPAK-PVVTI----ASVPSSPAKT 187

Query: 74  SPHW---LPSPAKKPMSPIASPKYGSSVTRVPSPPPPKDELLSPPVSPAKKYPDRWIAQT 133
           +P       SP +KP S IA+       TRVPSPP     +               +A  
Sbjct: 188 APTTSSVTSSPTQKPASSIAT------ATRVPSPPASTTAVK--------------LATQ 247

Query: 134 SPLQSPSRSLRTSPPPPPPPLALPPTQFTAVNGTTTQPKIQPEIEQKSIVYNKTVEKP-- 193
           SP+QSP   ++    PPP PL LPP+Q  A +    +PKI  E+EQK+++    ++KP  
Sbjct: 248 SPIQSPK--IKPPTAPPPSPLILPPSQLKARD--ELEPKIPVEVEQKTVLVQTRIDKPKP 307

Query: 194 -----AKFDRASEYGSG-----------------KPHEKQKAAEA-------INLAGHNV 253
                A+ D    Y                    K H+K+ ++++       I +AG N 
Sbjct: 308 ERVVTAQKDLGDTYKPSILLHGMKEPSKNGETKEKGHDKKFSSDSEDSSMRVITIAGENK 367

Query: 254 GAVMEIDKSSVGHRLGGE-------TVRGSVRDGNE----------EKKKKEKKE----L 308
           GA ME+ +S   +   G         +  ++ DG++           +K K+K      +
Sbjct: 368 GAFMELIQSPHKNGFQGNHREQKRTNLSRTISDGSDYQSYSSSEEGVRKVKDKSNTSRTM 427

[Close]

BLAST of CmoCh06G010200 vs. TrEMBL
Match: A0A0A0L3R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119280 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.8e-13
Identity = 92/256 (35.94%), Postives = 121/256 (47.27%), Query Frame = 1


Query: 79  SPAKKPMSPIASPKYGSSVT----RVPSPPPPKDELLSPPVSPAKKYPDRWIAQTSPLQS 138
           S A +P++P+ +     S      R PS    +D  L P  SP +    R   Q  P  S
Sbjct: 13  SSANRPLAPVTNTSGQDSAQYDGRRYPSSA--RDTSLEPRSSPPRVALRR-DDQPLPA-S 72

Query: 139 PSRSLRTSPPPPPPPLALPPTQFTAVNGT-----------TTQPKIQPEIEQKSIVYNK- 198
           P+ S++ +  PP  P    P      + T            TQP+  PE +QK  +++K 
Sbjct: 73  PTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYKPNTQPR-SPEAKQKPGIFHKS 132

Query: 199 TVEKPAKFDRASEYGSG-KPHEKQKAAEAINLAGHNVGAVMEIDKSSV---GHRLGG--E 258
           TVEK  K DR  E       H+ Q    AIN+ G NVGAVMEI +SS    GH +    E
Sbjct: 133 TVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESSKREGGHMIKKIKE 192

Query: 259 TVRGSVR------DGNEEKKKKEKKELPMTAFTNSNFQSVNNSVLYGSSCNHRDPGLHLK 307
           T RG +       D N E  K     +P   F NSNFQSVNNS+LY ++  HRDPGLHL 
Sbjct: 193 TARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHRDPGLHLA 252

[Close]

BLAST of CmoCh06G010200 vs. TAIR10
Match: AT2G46630.1 (AT2G46630.1 unknown protein)

HSP 1 Score: 59.3 bits (142), Expect = 4.8e-09
Identity = 84/308 (27.27%), Postives = 120/308 (38.96%), Query Frame = 1


Query: 60  KKPAPEPASPLKSSPHWLPSPAKKPMSPIASPKYGSSVTRVPSPPPPKDELLSPPVS--- 119
           ++ AP  + P + SP+   SP  + MSP   PK  +     P PPPP+    SPP     
Sbjct: 78  RQKAPPTSPPQERSPYH--SPPSRHMSPPTPPKAAT-----PPPPPPRSSYTSPPSPKEV 137

Query: 120 ------------PAKKYPDRWIAQTS-PLQSPSRSLRTSPPPPP---PPLALPPT----- 179
                       P+  +  R     S   +SPS S      P P    P +LP +     
Sbjct: 138 QEALPPRKPNSPPSPAHSSRSTTSESVKTRSPSESENHRKAPSPRVLSPYSLPASLLHSE 197

Query: 180 -QFTAVNGTTTQPKIQP-EIEQKSIVYNKTVEKPAKFDRASEYGSGKPH----------- 239
            + T  N  T +   Q  E    +  +N    +   +++   Y   + H           
Sbjct: 198 RETTQKNILTAEKTSQTHETNHHNQNHNHDYNQNHNYNQNHSYNQNQNHQGNNPKKMHRQ 257

Query: 240 ------EKQKAAEAINLAGHNVGAVMEIDKSSVGHRLGG-------------------ET 299
                 E   +   I +AG N GAVMEI +S  G++ GG                   ++
Sbjct: 258 PSSSDSENIMSTRVITIAGENKGAVMEILRSPQGNKTGGSGTHSSRVSHGTGEKGRRLQS 317

[Close]

BLAST of CmoCh06G010200 vs. NCBI nr
Match: gi|659074890|ref|XP_008437851.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo])

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64
Identity = 168/319 (52.66%), Postives = 200/319 (62.70%), Query Frame = 1


Query: 1   MSNFPRFGRSRQRPSVTAPPVLPTSLPATQLDPKIASMNLMGLCEVEVPPLKLPTIELKK 60
           M+N PRFGR+RQR     PPV   + PA +   +I                 LP      
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQI-----------------LPFATTIT 60

Query: 61  KPAPEPASPLKSSPHWLPSPAKKPMSPIASPKYGSSVTRVPSPPPPKDELLSPPVSPAKK 120
            PAP  ASP + SP  L SP KK  SP ASPKYG S TR+   P  K   +SPP S   K
Sbjct: 61  TPAP--ASPRRESPRPLSSPPKKATSPFASPKYGDSRTRLDRSPAAK-ATMSPPDSVRDK 120

Query: 121 YPDRWIAQTSPLQSPSRSLRTSPPPPPPPLALPPTQFTAVNGTTTQPKIQPEIEQKSIVY 180
           Y +R   +T+P  SP++S R +  PP  PLALP  Q    NGTT QP++QPE+E K IVY
Sbjct: 121 YFERRNGETTPPLSPAKS-RRAKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVY 180

Query: 181 NKTVEKPAKFDRAS-EYGSGKPHEKQKAAEAINLAGHNVGAVMEIDKSSVGHRLGGETVR 240
           NKTVEKP+K +R+S EYGS K H+K++  E I L GHNVGAVMEI+KSS G+RLGGET++
Sbjct: 181 NKTVEKPSKSNRSSGEYGSSKSHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLK 240

Query: 241 -------GSVRDGNEEKKKKE--KKELPMTAFTNSNFQSVNNSVLYGSSCNHRDPGLHLK 300
                  G V     E KK E  KKE P+TAF NSNFQSVNNS+L+ SSCNHRDPGLHL 
Sbjct: 241 KNETEDVGDVHGYGHEDKKTETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLA 298

Query: 301 FADAADGDGAAADGRKNYK 310
           F DA DGDGA  DG+K+YK
Sbjct: 301 FPDAVDGDGAIVDGQKSYK 298

[Close]

BLAST of CmoCh06G010200 vs. NCBI nr
Match: gi|449432018|ref|XP_004133797.1| (PREDICTED: atherin-like [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 3.0e-53
Identity = 151/319 (47.34%), Postives = 191/319 (59.87%), Query Frame = 1


Query: 1   MSNFPRFGRSRQRPSVTAPPVLPTSLPATQLDPKIASMNLMGLCEVEVPPLKLPTIELKK 60
           M+N PR GR+RQR S   PPV   + PA  ++PK  +M                      
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQPA--VEPKYETMPYA-----------------TS 60

Query: 61  KPAPEPASPLKSSPHWLPSPAKKPMSPIASPKYGSSVTRVPSPPPPKDELLSPPVSPAKK 120
              P PASP + SP  L SP+KK  SP AS        RV S P  K    SPP S   K
Sbjct: 61  ITTPAPASPRRESPRPLSSPSKKATSPFAS--------RVDSSPAAK-ATRSPPDSIGDK 120

Query: 121 YPDRWIAQTSPLQSPSRSLRTSPPPPPPPLALPPTQFTAVNGTTTQPKIQPEIEQKSIVY 180
           Y +R   +T+P  +P++S R +   P  PLALP +Q    NGTT QP++QPE+E K IVY
Sbjct: 121 YLERRNGETTPPLTPAKS-RPAKTSPLSPLALPRSQVITGNGTTAQPRVQPEVETKGIVY 180

Query: 181 NKTV-EKPAKFDRASEYGSGKP-HEKQKAAEAINLAGHNVGAVMEIDKSSVGHRLGGETV 240
           NK   EKP+K +R SE+GSGK  H+KQ+    + L GHNVGAVME++KSS G+RLGGET+
Sbjct: 181 NKAADEKPSKSNRQSEHGSGKSVHQKQQKPGVMKLKGHNVGAVMEVNKSSAGYRLGGETL 240

Query: 241 RGSVRD--------GNEEKKKKEKKELPMTAFTNSNFQSVNNSVLYGSSCNHRDPGLHLK 300
           +    +        G+E+KK   KK+ P++AF NSNFQSVNNS+L+ SSC HRDPGLHL 
Sbjct: 241 KKKETEDDGDVDGYGHEDKKTGRKKKPPISAFMNSNFQSVNNSLLFDSSCQHRDPGLHLS 290

Query: 301 FADAADGDGAAADGRKNYK 310
           F +AADG GA  DG K+YK
Sbjct: 301 FPNAADGGGAVVDGDKSYK 290

[Close]

BLAST of CmoCh06G010200 vs. NCBI nr
Match: gi|449432016|ref|XP_004133796.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 8.2e-27
Identity = 123/319 (38.56%), Postives = 153/319 (47.96%), Query Frame = 1


Query: 1   MSNFPRFGRSRQRPSVTAPPVLPTSLPATQLDPKIASMNLMGLCEVEVPPLKLPTIELKK 60
           MSN PRFGR   R S      LP    AT+ +P+          E EV P  +PT    +
Sbjct: 1   MSNLPRFGRQWNRFSS-----LPRPGTATRPEPQ----PFTAATEPEVFPSAVPTTNTFQ 60

Query: 61  KPAPEPASPLKSSPHWLPSPAKKPMSPIASPKYGSSVT---RVPSPPPPK------DELL 120
                  SP+K     L SP KK  SP +SPKY  + T   R P  PPP       +   
Sbjct: 61  ------TSPIKQRTPRLSSPVKKFSSPPSSPKYSGAGTVSPRKPLSPPPVHNRYEGERRT 120

Query: 121 SPPVSPAKKYPDRWIAQTSPLQSPSRSLRTSPPP---PPPPLALPPTQFTAVNGTTTQPK 180
           S   SP    P       SP  SPS+   ++ P    P  PLALP +Q       + +P+
Sbjct: 121 SATTSPKTFKP----THISPPPSPSKPRHSTVPTAVAPLSPLALPRSQVRREPEHSLRPR 180

Query: 181 IQPEIEQKSIVYNKTV-EKPAKFD---RASEYGSGKPHEKQK----AAEAINLAGHNVGA 240
             PEIEQK I+Y  T  EKP K D   +  EYG+ KP +KQ+     ++ IN+ G NVGA
Sbjct: 181 SPPEIEQKKILYQTTTTEKPTKTDHYRQNDEYGASKPQQKQQHQQLQSDVINIKGENVGA 240

Query: 241 VMEIDKSSVGHRLGGETVRGSVRDGNEEKKKKEKKELPMTAFTNSNFQSVNNSVLYGSSC 300
           VM I +SS G  +  +         NEEK  K     P  +F NSNFQ VNNS+LY SS 
Sbjct: 241 VMHITQSSDGSEVIKKKPTVGQSKENEEKTNKSNSNYPGKSFMNSNFQGVNNSILYNSSL 300

[Close]

BLAST of CmoCh06G010200 vs. NCBI nr
Match: gi|659074888|ref|XP_008437849.1| (PREDICTED: microtubule-associated protein RP/EB family member 1-like [Cucumis melo])

HSP 1 Score: 126.7 bits (317), Expect = 7.0e-26
Identity = 122/316 (38.61%), Postives = 155/316 (49.05%), Query Frame = 1


Query: 1   MSNFPRFGRSRQRPSVTAPPVLPTSLPATQLDPKIASMNLMGLCEVEVPPLKLPTIELKK 60
           MSN PRFGR+  R S      LP    A + + + A        E EV P  +PT    +
Sbjct: 1   MSNLPRFGRTWNRFSS-----LPRPSTAARQETQPA---FTAATEPEVFPSAVPTTNTLQ 60

Query: 61  KPAPEPASPLKSSPHWLPSPAKKPMSPIASPKYGSSVTRVPSPPPPKDELLSPPVSPAKK 120
                  SP+K     L SP KK  SP +SPKY S  T   SP  P    LSPP +  + 
Sbjct: 61  ------TSPVKQRTPRLSSPVKKFPSPPSSPKY-SGATGTISPRKP----LSPPSTYNRH 120

Query: 121 YPDRWIAQTSPLQSPSRSLRT--SPPPPPP---------------PLALPPTQFTAVNGT 180
             +R   +TS   SP     T  SPPP PP               PLALP ++       
Sbjct: 121 DGER---RTSATTSPKTFKPTYISPPPSPPKPKHSTAATVVAPLSPLALPRSEVRREPER 180

Query: 181 TTQPKIQPEIEQKSIVYNKTV-EKPAKFD--RASEYGSGKP----HEKQKAAEAINLAGH 240
           + +P+  PEIEQK I+Y  T  EKP K D  +  +YG+ KP    H +Q  ++ IN+ G 
Sbjct: 181 SIRPRSPPEIEQKKILYQTTTTEKPTKTDYRQTDQYGTSKPQQKQHHQQLQSDVINIKGD 240

Query: 241 NVGAVMEIDKSSVGHRLGGETVRGSVRDGNEEKKKKEKKELPMTAFTNSNFQSVNNSVLY 293
           NVGAVM I +SS G  +  +         NEEK  K     P  +F NSNFQ VNNS+LY
Sbjct: 241 NVGAVMHITQSSDGSEILKKKPSVGQSKENEEKTNKSNSNFPGKSFMNSNFQGVNNSILY 294

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BLAST of CmoCh06G010200 vs. NCBI nr
Match: gi|778676797|ref|XP_011650663.1| (PREDICTED: gibberellin-regulated protein 14-like [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 1.9e-23
Identity = 122/317 (38.49%), Postives = 161/317 (50.79%), Query Frame = 1


Query: 1   MSNFPRFGRSRQRPSVTAPPVLPTSLPATQLDPKIASMNLMGLCEVEVPPLKLPTIELKK 60
           M+N PR+GR R R S T   + PT+  + Q +P           E E+ PL  PTI+  +
Sbjct: 1   MANLPRYGR-RWRLS-TVSRLAPTATQSVQ-EP-----------EPEILPLA-PTIQTLQ 60

Query: 61  KPAPEP---ASPLKSSPHWLPSPAKKPMSPIASPKYGSSVTRVPSPPPPKDELLSPPVSP 120
              P P   A+P  S+P     P  +   P ASPKY ++V R  S  PP     SPPVSP
Sbjct: 61  PFEPTPPAAAAPPSSTPG---EPTPRISPPAASPKYEATVIREAS--PPLKPARSPPVSP 120

Query: 121 AKKYPD-RWIAQTSPLQSPSRSLRTSPPPPPPPLALPPTQFTAVNGTTTQPKIQPEIEQK 180
            +K  D R     +  Q P +  R    P    LALP     + + TT    I+PE+EQK
Sbjct: 121 PRKSVDPRHSISPNSYQEPLKPTR----PSLSTLALP----KSADVTTVPSAIKPEVEQK 180

Query: 181 SIVYNKTVEKPAKFDRASEYGSGKPHEKQKAAEAINLAGHNVGAVMEI----DKSSVGHR 240
           +  + K+       DR  +  S KP    + A+AINL G N+GAVM+I    DK S G  
Sbjct: 181 TDSFKKS-------DRQVDNVSAKPPPSLQ-AKAINLTGDNIGAVMKINQFSDKISGGEV 240

Query: 241 LGGETVRGSVRDGNEEKKKKEKKELPMTAFTNSNFQSVNNSVLYGSSCNHRDPGLHLKFA 300
                 +  V+  N+ +K + + E PMT  TNSNFQ VNNSV+Y SSC+ RDPGLHL F+
Sbjct: 241 TRKIETKTGVQQENDMEKSRRETEFPMTPITNSNFQEVNNSVMYNSSCSGRDPGLHLDFS 280

Query: 301 DAADGDGAAADGRKNYK 310
              D + A  DG K  K
Sbjct: 301 GQKD-EAATVDGNKKSK 280

The following BLAST results are available for this feature:

BLAST of CmoCh06G010200 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh06G010200 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L320_CUCSA	2.1e-53	47.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1	[more]
A0A0A0L5T3_CUCSA	5.7e-27	38.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1	[more]
A0A0A0L8G8_CUCSA	1.3e-23	38.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119310 PE=4 SV=1	[more]
A0A061DS56_THECC	1.2e-13	30.00	Uncharacterized protein OS=Theobroma cacao GN=TCM_005083 PE=4 SV=1	[more]
A0A0A0L3R5_CUCSA	2.8e-13	35.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119280 PE=4 SV=1	[more]

BLAST of CmoCh06G010200 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46630.1	4.8e-09	27.27	unknown protein	[more]

BLAST of CmoCh06G010200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074890\|ref\|XP_008437851.1\|	2.2e-64	52.66	PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo]	[more]
gi\|449432018\|ref\|XP_004133797.1\|	3.0e-53	47.34	PREDICTED: atherin-like [Cucumis sativus]	[more]
gi\|449432016\|ref\|XP_004133796.1\|	8.2e-27	38.56	PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus]	[more]
gi\|659074888\|ref\|XP_008437849.1\|	7.0e-26	38.61	PREDICTED: microtubule-associated protein RP/EB family member 1-like [Cucumis me...	[more]
gi\|778676797\|ref\|XP_011650663.1\|	1.9e-23	38.49	PREDICTED: gibberellin-regulated protein 14-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G010200.1	CmoCh06G010200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33472	FAMILY NOT NAMED	coord: 1..300 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G010200	Wild cucumber (PI 183967)	cmocpiB814
CmoCh06G010200	Cucumber (Chinese Long) v2	cmocuB806
CmoCh06G010200	Melon (DHL92) v3.5.1	cmomeB755
CmoCh06G010200	Watermelon (Charleston Gray)	cmowcgB743
CmoCh06G010200	Watermelon (97103) v1	cmowmB793
CmoCh06G010200	Cucurbita pepo (Zucchini)	cmocpeB787
CmoCh06G010200	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G010200	Bottle gourd (USVL1VR-Ls)	cmolsiB758
CmoCh06G010200	Cucumber (Gy14) v2	cgybcmoB401
CmoCh06G010200	Melon (DHL92) v3.6.1	cmomedB836
CmoCh06G010200	Melon (DHL92) v3.6.1	cmomedB857
CmoCh06G010200	Silver-seed gourd	carcmoB0171
CmoCh06G010200	Silver-seed gourd	carcmoB1332
CmoCh06G010200	Cucumber (Chinese Long) v3	cmocucB0953
CmoCh06G010200	Cucumber (Chinese Long) v3	cmocucB0976
CmoCh06G010200	Watermelon (97103) v2	cmowmbB810
CmoCh06G010200	Watermelon (97103) v2	cmowmbB833
CmoCh06G010200	Wax gourd	cmowgoB1002
CmoCh06G010200	Wax gourd	cmowgoB1013
CmoCh06G010200	Cucurbita moschata (Rifu)	cmocmoB224
CmoCh06G010200	Cucumber (Gy14) v1	cgycmoB0718
CmoCh06G010200	Cucurbita maxima (Rimu)	cmacmoB026
CmoCh06G010200	Cucurbita maxima (Rimu)	cmacmoB271
CmoCh06G010200	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G010200	Cucurbita maxima (Rimu)	cmacmoB832