CmoCh06G009910 (gene) Cucurbita moschata (Rifu)

NameCmoCh06G009910
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Pentatricopeptide repeat-containing protein, putative) (2.3.1.74)
LocationCmo_Chr06 : 7790162 .. 7792437 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCCTTAAGCTCTACTACATGCGAGCAAGAGCATAGGCTATATTCCAATGGCCGTCATTTCCAGTTTTAAGGACGGGGCGGCGGTTGTTTTCAGAAGGCAGTCGTCAAACATGCATCGGCGTCTTCCGTTTCTCAGGTGATCTTTCGGAAATCTTTCATTTTCATTCATCGGAGTTCTGAATTTGCATTCTATTTTATACTGATTCTGCAAACCAGGTGCTATTCTTCTCGACTAACCGAGGCCGAAACCAAATCATCGAACAGAACCAAAAAGGCGAGAGACATGGCACGGATGATCAACTCTAAACCTTGGTCGAATGACCTTGAGTCATCTCTGGCTTCATTCTCACCCTCCCTCTCTAAAACCACCGTTCTTCAAACTCTAGGTTTCCTCAGAGACCCATCTAAAGCCCTAAAATTCTTCAACTGGGCACAAGAAATGGGTCACGCTCACACTGACCAATCCTACTTCTCGATTTTAGAAATTTTGGGTCGCAATCGGCATCTTAATGCGGCTAGGAATTTCCTGTTTTCGATCGAAAAACGCTCTCGTGGAGCAGTCAAACTCGAAGCCCGATTCTTCAATAGCTTAATGAGGAACTTTAGTCGAGCTGGACTCTTTCAAGAATCTATAAACCTTTTTACGACGATGAAATCACATGGGGTTTCCCCATCGATTGTTACATTCAATAGTCTTTTGACCATTTTGCTTAAAAGGGGCAGGACTAATATGGCGAAGAACGTGTATGATGAAATGCTTAGTACTTATGGAGTGACTCCTGATACATTTACATTCAACATTTTGATTAGAGGATTTTGTATGAATGGCATGGTTGATGAAGGTTTTAGAATTTTCAAGGACTTGTCTCGCTTTGGTTGCGAACCGGATGTTATCACATATAACACACTTGTTGATGGGTTGTGCAGGGGAGGTAAGGTTACCATTGCATATAATGTGGTAAAGGCAATGGGGAAGAAAAGCGTGGATCTGAATCCCAATGTTGTTACATACACAACTTTGATTAGAGGTTACTGTGCGAAGCGAGAGATTAACAATGCCTTAGCTGTTTTCGAAGAAATGGTCAATCTAGGCTTGAAAGCAAACAACATAACCTACAATACTTTAATTAAGGGGCTTTGTGAAGCCGAGAAATTCGAGAAAGTAAAGGAGATATTGGAGGCAACAGCAGTAGATGGAACGTTTTCTCCTGATACATGCACATTCAACACTTTGATGCATTGCCATTGTGATGCAGGAAACTTGGATGAAGCCTTGAGAGTGTTCGAGAGGATGACGAAGTTAAAGATTCGACCAGATTCGGCTACATATAGTGTATTGATTAGAAGTTTGTGTGAAGGGAAGTATTATGAGAAGGCTGAGAACTTGTTAGATAAACTATTAGAGAAAAGAATCTTGTTAAGTGATGATGGTTGTAAGCCTCTTGTCGCTGCGTATAACCCCATTTTCAAGTATTTATGTGAAAATGGAAAGGCTAAGAAAGCTGAAACAGTGTTTAGGCAGCTAATGAGAAGAGGAACACAAGACCCTCCATCTTACAAGACGTTGATCATGGGGCATTGTAACGAAGGTACATTCGAATCTGGGTATGAGCTACTAGTCTTGATGTTGAGGAAAGATTTTTTACCAGATATGGAGGTATATGAAGCTTTGATTAATGGGTTTTTGCACAAGGATAAGCCACTTCTTGCCCTTCAGACACTCGAAAAGATGCTGAGGAGCTCCCATCTTCCTGAATCATCTACTTTTCATTCTATACTTGAAAAACTCTTAGAACAAGGAAATGCATCTGAATCTGCTAGTCTTATACAGTTAATGTTAGACAAGAATATTAGACAAAATCTCGGTTTTTCAACTGGCTGCATAAGACTACTTTTTGAAGCTGGAATCAACGACAAAGCGTTCCAAATTGTTCGTATGCTTTATGGAAATGGCTATTCGGTTAAAATGGAAGAACTAATTCTTTTTCTTTGCCACTGCAAAAAGTATATAGAGGCATCTAAAATGTTGCTATTTAGTTTAGAAAGTCATCAAGCTGTCGACATCGATGTTTGTAGTGCGGTAATTTTTCACCTTTGTCAAATTAATAAGTTGTCTGAAGCATTTGGTCTGTACTATAAGCTGGTGGAGATGGGAGTCCACCAACAGCTAAGTTGTCTAAACCAGCTGAAAGCTTCTCTCGAGGCTGGGGGAAAATTCGAAGAGGTCGAGTTCGTATCAAAAAGGATGGAACCACAACTGAAATACAAAAGTTAG

mRNA sequence

GCTCCTTAAGCTCTACTACATGCGAGCAAGAGCATAGGCTATATTCCAATGGCCGTCATTTCCAGTTTTAAGGACGGGGCGGCGGTTGTTTTCAGAAGGCAGTCGTCAAACATGCATCGGCGTCTTCCGTTTCTCAGGTGCTATTCTTCTCGACTAACCGAGGCCGAAACCAAATCATCGAACAGAACCAAAAAGGCGAGAGACATGGCACGGATGATCAACTCTAAACCTTGGTCGAATGACCTTGAGTCATCTCTGGCTTCATTCTCACCCTCCCTCTCTAAAACCACCGTTCTTCAAACTCTAGGTTTCCTCAGAGACCCATCTAAAGCCCTAAAATTCTTCAACTGGGCACAAGAAATGGGTCACGCTCACACTGACCAATCCTACTTCTCGATTTTAGAAATTTTGGGTCGCAATCGGCATCTTAATGCGGCTAGGAATTTCCTGTTTTCGATCGAAAAACGCTCTCGTGGAGCAGTCAAACTCGAAGCCCGATTCTTCAATAGCTTAATGAGGAACTTTAGTCGAGCTGGACTCTTTCAAGAATCTATAAACCTTTTTACGACGATGAAATCACATGGGGTTTCCCCATCGATTGTTACATTCAATAGTCTTTTGACCATTTTGCTTAAAAGGGGCAGGACTAATATGGCGAAGAACGTGTATGATGAAATGCTTAGTACTTATGGAGTGACTCCTGATACATTTACATTCAACATTTTGATTAGAGGATTTTGTATGAATGGCATGGTTGATGAAGGTTTTAGAATTTTCAAGGACTTGTCTCGCTTTGGTTGCGAACCGGATGTTATCACATATAACACACTTGTTGATGGGTTGTGCAGGGGAGGTAAGGTTACCATTGCATATAATGTGGTAAAGGCAATGGGGAAGAAAAGCGTGGATCTGAATCCCAATGTTGTTACATACACAACTTTGATTAGAGGTTACTGTGCGAAGCGAGAGATTAACAATGCCTTAGCTGTTTTCGAAGAAATGGTCAATCTAGGCTTGAAAGCAAACAACATAACCTACAATACTTTAATTAAGGGGCTTTGTGAAGCCGAGAAATTCGAGAAAGTAAAGGAGATATTGGAGGCAACAGCAGTAGATGGAACGTTTTCTCCTGATACATGCACATTCAACACTTTGATGCATTGCCATTGTGATGCAGGAAACTTGGATGAAGCCTTGAGAGTGTTCGAGAGGATGACGAAGTTAAAGATTCGACCAGATTCGGCTACATATAGTGTATTGATTAGAAGTTTGTGTGAAGGGAAGTATTATGAGAAGGCTGAGAACTTGTTAGATAAACTATTAGAGAAAAGAATCTTGTTAAGTGATGATGGTTGTAAGCCTCTTGTCGCTGCGTATAACCCCATTTTCAAGTATTTATGTGAAAATGGAAAGGCTAAGAAAGCTGAAACAGTGTTTAGGCAGCTAATGAGAAGAGGAACACAAGACCCTCCATCTTACAAGACGTTGATCATGGGGCATTGTAACGAAGGTACATTCGAATCTGGGTATGAGCTACTAGTCTTGATGTTGAGGAAAGATTTTTTACCAGATATGGAGGTATATGAAGCTTTGATTAATGGGTTTTTGCACAAGGATAAGCCACTTCTTGCCCTTCAGACACTCGAAAAGATGCTGAGGAGCTCCCATCTTCCTGAATCATCTACTTTTCATTCTATACTTGAAAAACTCTTAGAACAAGGAAATGCATCTGAATCTGCTAGTCTTATACAGTTAATGTTAGACAAGAATATTAGACAAAATCTCGGTTTTTCAACTGGCTGCATAAGACTACTTTTTGAAGCTGGAATCAACGACAAAGCGTTCCAAATTGTTCGTATGCTTTATGGAAATGGCTATTCGGTTAAAATGGAAGAACTAATTCTTTTTCTTTGCCACTGCAAAAAGTATATAGAGGCATCTAAAATGTTGCTATTTAGTTTAGAAAGTCATCAAGCTGTCGACATCGATGTTTGTAGTGCGGTAATTTTTCACCTTTGTCAAATTAATAAGTTGTCTGAAGCATTTGGTCTGTACTATAAGCTGGTGGAGATGGGAGTCCACCAACAGCTAAGTTGTCTAAACCAGCTGAAAGCTTCTCTCGAGGCTGGGGGAAAATTCGAAGAGGTCGAGTTCGTATCAAAAAGGATGGAACCACAACTGAAATACAAAAGTTAG

Coding sequence (CDS)

ATGGCCGTCATTTCCAGTTTTAAGGACGGGGCGGCGGTTGTTTTCAGAAGGCAGTCGTCAAACATGCATCGGCGTCTTCCGTTTCTCAGGTGCTATTCTTCTCGACTAACCGAGGCCGAAACCAAATCATCGAACAGAACCAAAAAGGCGAGAGACATGGCACGGATGATCAACTCTAAACCTTGGTCGAATGACCTTGAGTCATCTCTGGCTTCATTCTCACCCTCCCTCTCTAAAACCACCGTTCTTCAAACTCTAGGTTTCCTCAGAGACCCATCTAAAGCCCTAAAATTCTTCAACTGGGCACAAGAAATGGGTCACGCTCACACTGACCAATCCTACTTCTCGATTTTAGAAATTTTGGGTCGCAATCGGCATCTTAATGCGGCTAGGAATTTCCTGTTTTCGATCGAAAAACGCTCTCGTGGAGCAGTCAAACTCGAAGCCCGATTCTTCAATAGCTTAATGAGGAACTTTAGTCGAGCTGGACTCTTTCAAGAATCTATAAACCTTTTTACGACGATGAAATCACATGGGGTTTCCCCATCGATTGTTACATTCAATAGTCTTTTGACCATTTTGCTTAAAAGGGGCAGGACTAATATGGCGAAGAACGTGTATGATGAAATGCTTAGTACTTATGGAGTGACTCCTGATACATTTACATTCAACATTTTGATTAGAGGATTTTGTATGAATGGCATGGTTGATGAAGGTTTTAGAATTTTCAAGGACTTGTCTCGCTTTGGTTGCGAACCGGATGTTATCACATATAACACACTTGTTGATGGGTTGTGCAGGGGAGGTAAGGTTACCATTGCATATAATGTGGTAAAGGCAATGGGGAAGAAAAGCGTGGATCTGAATCCCAATGTTGTTACATACACAACTTTGATTAGAGGTTACTGTGCGAAGCGAGAGATTAACAATGCCTTAGCTGTTTTCGAAGAAATGGTCAATCTAGGCTTGAAAGCAAACAACATAACCTACAATACTTTAATTAAGGGGCTTTGTGAAGCCGAGAAATTCGAGAAAGTAAAGGAGATATTGGAGGCAACAGCAGTAGATGGAACGTTTTCTCCTGATACATGCACATTCAACACTTTGATGCATTGCCATTGTGATGCAGGAAACTTGGATGAAGCCTTGAGAGTGTTCGAGAGGATGACGAAGTTAAAGATTCGACCAGATTCGGCTACATATAGTGTATTGATTAGAAGTTTGTGTGAAGGGAAGTATTATGAGAAGGCTGAGAACTTGTTAGATAAACTATTAGAGAAAAGAATCTTGTTAAGTGATGATGGTTGTAAGCCTCTTGTCGCTGCGTATAACCCCATTTTCAAGTATTTATGTGAAAATGGAAAGGCTAAGAAAGCTGAAACAGTGTTTAGGCAGCTAATGAGAAGAGGAACACAAGACCCTCCATCTTACAAGACGTTGATCATGGGGCATTGTAACGAAGGTACATTCGAATCTGGGTATGAGCTACTAGTCTTGATGTTGAGGAAAGATTTTTTACCAGATATGGAGGTATATGAAGCTTTGATTAATGGGTTTTTGCACAAGGATAAGCCACTTCTTGCCCTTCAGACACTCGAAAAGATGCTGAGGAGCTCCCATCTTCCTGAATCATCTACTTTTCATTCTATACTTGAAAAACTCTTAGAACAAGGAAATGCATCTGAATCTGCTAGTCTTATACAGTTAATGTTAGACAAGAATATTAGACAAAATCTCGGTTTTTCAACTGGCTGCATAAGACTACTTTTTGAAGCTGGAATCAACGACAAAGCGTTCCAAATTGTTCGTATGCTTTATGGAAATGGCTATTCGGTTAAAATGGAAGAACTAATTCTTTTTCTTTGCCACTGCAAAAAGTATATAGAGGCATCTAAAATGTTGCTATTTAGTTTAGAAAGTCATCAAGCTGTCGACATCGATGTTTGTAGTGCGGTAATTTTTCACCTTTGTCAAATTAATAAGTTGTCTGAAGCATTTGGTCTGTACTATAAGCTGGTGGAGATGGGAGTCCACCAACAGCTAAGTTGTCTAAACCAGCTGAAAGCTTCTCTCGAGGCTGGGGGAAAATTCGAAGAGGTCGAGTTCGTATCAAAAAGGATGGAACCACAACTGAAATACAAAAGTTAG
BLAST of CmoCh06G009910 vs. Swiss-Prot
Match: PPR2_ARATH (Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2 SV=2)

HSP 1 Score: 799.3 bits (2063), Expect = 3.5e-230
Identity = 399/684 (58.33%), Postives = 518/684 (75.73%), Query Frame = 1

Query: 27  PFLRCYSSRLTEAETKSSNRTKKARDMARMINSKPWSNDLESSLASFSPS--LSKTTVLQ 86
           P LR       E  TKS    K AR +AR +NS PWS++LESSL+S  PS  +S+TTVLQ
Sbjct: 18  PVLRAAKVTNEERSTKS----KLARSLARAVNSNPWSDELESSLSSLHPSQTISRTTVLQ 77

Query: 87  TLGFLRDPSKALKFFNWAQEMGHAHTDQSYFSILEILGRNRHLNAARNFLFSIEKRSRGA 146
           TL  ++ P+  L+FF+W    G +H +QS+F +LE LGR R+LN ARNFLFSIE+RS G 
Sbjct: 78  TLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGC 137

Query: 147 VKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGVSPSIVTFNSLLTILLKRGRTNMAK 206
           VKL+ R+FNSL+R++  AGLFQES+ LF TMK  G+SPS++TFNSLL+ILLKRGRT MA 
Sbjct: 138 VKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAH 197

Query: 207 NVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDG 266
           +++DEM  TYGVTPD++TFN LI GFC N MVDE FRIFKD+  + C PDV+TYNT++DG
Sbjct: 198 DLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDG 257

Query: 267 LCRGGKVTIAYNVVKAMGKKSVDLNPNVVTYTTLIRGYCAKREINNALAVFEEMVNLGLK 326
           LCR GKV IA+NV+  M KK+ D++PNVV+YTTL+RGYC K+EI+ A+ VF +M++ GLK
Sbjct: 258 LCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLK 317

Query: 327 ANNITYNTLIKGLCEAEKFEKVKEIL-EATAVDGTFSPDTCTFNTLMHCHCDAGNLDEAL 386
            N +TYNTLIKGL EA +++++K+IL        TF+PD CTFN L+  HCDAG+LD A+
Sbjct: 318 PNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAM 377

Query: 387 RVFERMTKLKIRPDSATYSVLIRSLCEGKYYEKAENLLDKLLEKRILLSDDGCKPLVAAY 446
           +VF+ M  +K+ PDSA+YSVLIR+LC    +++AE L ++L EK +LL  D CKPL AAY
Sbjct: 378 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 437

Query: 447 NPIFKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTLIMGHCNEGTFESGYELLVLMLRK 506
           NP+F+YLC NGK K+AE VFRQLM+RG QDPPSYKTLI GHC EG F+  YELLVLMLR+
Sbjct: 438 NPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRR 497

Query: 507 DFLPDMEVYEALINGFLHKDKPLLALQTLEKMLRSSHLPESSTFHSILEKLLEQGNASES 566
           +F+PD+E YE LI+G L   + LLA  TL++MLRSS+LP ++TFHS+L +L ++  A+ES
Sbjct: 498 EFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANES 557

Query: 567 ASLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQIVRMLYGNGYSVKMEELILFLCH 626
             L+ LML+K IRQN+  ST  +RLLF +   +KAF IVR+LY NGY VKMEEL+ +LC 
Sbjct: 558 FCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCE 617

Query: 627 CKKYIEASKMLLFSLESHQAVDIDVCSAVIFHLCQINKLSEAFGLYYKLVEMGVHQQLSC 686
            +K ++A  ++LF LE  Q VDID C+ VI  LC+  + SEAF LY +LVE+G HQQLSC
Sbjct: 618 NRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSC 677

Query: 687 LNQLKASLEAGGKFEEVEFVSKRM 708
              L+ +LEA GK+EE++FVSKRM
Sbjct: 678 HVVLRNALEAAGKWEELQFVSKRM 697

BLAST of CmoCh06G009910 vs. Swiss-Prot
Match: PP190_ARATH (Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.1e-98
Identity = 215/671 (32.04%), Postives = 357/671 (53.20%), Query Frame = 1

Query: 42  KSSNRTKKARDMARMINSKPWSNDLESSLASFSPSLSKTTVLQTLGFLRDPSKALKFFNW 101
           K  N  K    + RM++++ W+  L++S+    P    + V   L   +    AL+FF W
Sbjct: 80  KRQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRW 139

Query: 102 AQEMGHAHTDQ-SYFSILEILGRNRHLNAARNFLFSIEKRSRGAVKLEARFFNSLMRNFS 161
            +  G    D+ ++  ++++LG    LN AR  L  + ++    V  +   F  L+ ++ 
Sbjct: 140 TERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKG---VPWDEDMFVVLIESYG 199

Query: 162 RAGLFQESINLFTTMKSHGVSPSIVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDT 221
           +AG+ QES+ +F  MK  GV  +I ++NSL  ++L+RGR  MAK  +++M+S  GV P  
Sbjct: 200 KAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSE-GVEPTR 259

Query: 222 FTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDGLCRGGKVTIAYNVVKA 281
            T+N+++ GF ++  ++   R F+D+   G  PD  T+NT+++G CR  K+  A  +   
Sbjct: 260 HTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVE 319

Query: 282 MGKKSVDLNPNVVTYTTLIRGYCAKREINNALAVFEEMVNLGLKANNITYNTLIKGLCEA 341
           M  K   + P+VV+YTT+I+GY A   +++ L +FEEM + G++ N  TY+TL+ GLC+A
Sbjct: 320 M--KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDA 379

Query: 342 EKFEKVKEILEATAVDGTFSPDTCTFNTLMHCHCDAGNLDEALRVFERMTKLKIRPDSAT 401
            K  + K IL+          D   F  L+     AG++  A  V + M  L +  ++  
Sbjct: 380 GKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGH 439

Query: 402 YSVLIRSLCEGKYYEKAENLLDKLLEKRILLS-DDGCKPLVAAYNPIFKYLCENGKAKKA 461
           Y VLI + C+   Y +A  LLD L+EK I+L   D  +   +AYNPI +YLC NG+  KA
Sbjct: 440 YGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKA 499

Query: 462 ETVFRQLMRRGTQDPPSYKTLIMGHCNEGTFESGYELLVLMLRKDFLPDMEVYEALINGF 521
           E +FRQLM+RG QD  +   LI GH  EG  +S YE+L +M R+    +   YE LI  +
Sbjct: 500 EVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSY 559

Query: 522 LHKDKPLLALQTLEKMLRSSHLPESSTFHSILEKLLEQGNASESASLIQLMLDKN--IRQ 581
           + K +P  A   L+ M+   H+P+SS F S++E L E G    ++ ++ +M+DKN  I  
Sbjct: 560 MSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIED 619

Query: 582 NLGFSTGCIRLLFEAGINDKAFQIVRMLYGNGYSVKMEELILFLCHCKKYIEASKMLLFS 641
           N+      +  L   G  ++A   + +L  NG++  ++ L+  L    K I A K+L F 
Sbjct: 620 NMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLSVLSEKGKTIAALKLLDFG 679

Query: 642 LESHQAVDIDVCSAVIFHLCQINKLSEAFGLYYKLVEMGVHQQLSCLNQLKASLEAGGKF 701
           LE   +++      V+  L    K   A+ +  K++E G        ++L  SL   G  
Sbjct: 680 LERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNT 739

Query: 702 EEVEFVSKRME 709
           ++ + +S+ ++
Sbjct: 740 KQADVLSRMIK 744

BLAST of CmoCh06G009910 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.4e-58
Identity = 139/522 (26.63%), Postives = 254/522 (48.66%), Query Frame = 1

Query: 71  ASFSPSLSKTTVLQTLGFLRDPSKALKFFNWAQEMG-----------HAHTDQSYFSILE 130
           A+F+P  +   +L++     D +  LKF NWA               H  T    +   +
Sbjct: 44  ANFTPEAASNLLLKSQN---DQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQ 103

Query: 131 ILGRNRHLNAA----RNFLFSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTM 190
           IL  +           + +F   + +       +  F+ +++++SR  L  +++++    
Sbjct: 104 ILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLA 163

Query: 191 KSHGVSPSIVTFNSLLTILLKRGRT-NMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNG 250
           ++HG  P ++++N++L   ++  R  + A+NV+ EML +  V+P+ FT+NILIRGFC  G
Sbjct: 164 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ-VSPNVFTYNILIRGFCFAG 223

Query: 251 MVDEGFRIFKDLSRFGCEPDVITYNTLVDGLCRGGKVTIAYNVVKAMGKKSVDLNPNVVT 310
            +D    +F  +   GC P+V+TYNTL+DG C+  K+   + ++++M  K   L PN+++
Sbjct: 224 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG--LEPNLIS 283

Query: 311 YTTLIRGYCAKREINNALAVFEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATA 370
           Y  +I G C +  +     V  EM   G   + +TYNTLIKG C+   F +   ++ A  
Sbjct: 284 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL-VMHAEM 343

Query: 371 VDGTFSPDTCTFNTLMHCHCDAGNLDEALRVFERMTKLKIRPDSATYSVLIRSLCEGKYY 430
           +    +P   T+ +L+H  C AGN++ A+   ++M    + P+  TY+ L+    +  Y 
Sbjct: 344 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 403

Query: 431 EKAENLLDKLLEKRILLSDDGCKPLVAAYNPIFKYLCENGKAKKAETVFRQLMRRG-TQD 490
            +A  +L +       ++D+G  P V  YN +    C  GK + A  V   +  +G + D
Sbjct: 404 NEAYRVLRE-------MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 463

Query: 491 PPSYKTLIMGHCNEGTFESGYELLVLMLRKDFLPDMEVYEALINGFLHKDKPLLALQTLE 550
             SY T++ G C     +    +   M+ K   PD   Y +LI GF  + +   A    E
Sbjct: 464 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 523

Query: 551 KMLRSSHLPESSTFHSILEKLLEQGNASESASLIQLMLDKNI 576
           +MLR    P+  T+ +++     +G+  ++  L   M++K +
Sbjct: 524 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551

BLAST of CmoCh06G009910 vs. Swiss-Prot
Match: PP445_ARATH (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 4.3e-55
Identity = 155/552 (28.08%), Postives = 263/552 (47.64%), Query Frame = 1

Query: 146 KLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGVSPSIVTFNSLLTILLKRGRTNMAKN 205
           KL    +N+L+ + +R GL  E   ++  M    V P+I T+N ++    K G    A N
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA-N 239

Query: 206 VYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDGL 265
            Y   +   G+ PD FT+  LI G+C    +D  F++F ++   GC  + + Y  L+ GL
Sbjct: 240 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 299

Query: 266 CRGGKVTIAYNVVKAMGKKSVDLNPNVVTYTTLIRGYCAKREINNALAVFEEMVNLGLKA 325
           C   ++  A ++   M  K  +  P V TYT LI+  C     + AL + +EM   G+K 
Sbjct: 300 CVARRIDEAMDLFVKM--KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 359

Query: 326 NNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFSPDTCTFNTLMHCHCDAGNLDEALRV 385
           N  TY  LI  LC   KFEK +E+L      G   P+  T+N L++ +C  G +++A+ V
Sbjct: 360 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKG-LMPNVITYNALINGYCKRGMIEDAVDV 419

Query: 386 FERMTKLKIRPDSATYSVLIRSLCEGKYYEKAENLLDKLLEKRILLSDDGCKPLVAAYNP 445
            E M   K+ P++ TY+ LI+  C+   + KA  +L+K+LE+++L       P V  YN 
Sbjct: 420 VELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVL-------PDVVTYNS 479

Query: 446 IFKYLCENGKAKKAETVFRQLMRRG-TQDPPSYKTLIMGHCNEGTFESGYELLVLMLRKD 505
           +    C +G    A  +   +  RG   D  +Y ++I   C     E   +L   + +K 
Sbjct: 480 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 539

Query: 506 FLPDMEVYEALINGFLHKDKPLLALQTLEKMLRSSHLPESSTFHSILEKLLEQGNASESA 565
             P++ +Y ALI+G+    K   A   LEKML  + LP S TF++++  L   G   E+ 
Sbjct: 540 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 599

Query: 566 SLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQIVRMLYGNGYSVKMEELILFL--- 625
            L + M+   ++  +   T  I  L + G  D A+   + +  +G          F+   
Sbjct: 600 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 659

Query: 626 CHCKKYIEASKMLLFSLESHQAVDIDVCSAVIFHLCQINKLSEAFGLYYKLVEMGVH-QQ 685
           C   + ++A  M+    E+  + D+   S++I     + + + AF +  ++ + G    Q
Sbjct: 660 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 719

Query: 686 LSCLNQLKASLE 693
            + L+ +K  LE
Sbjct: 720 HTFLSLIKHLLE 719

BLAST of CmoCh06G009910 vs. Swiss-Prot
Match: PPR38_ARATH (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.0e-51
Identity = 129/454 (28.41%), Postives = 230/454 (50.66%), Query Frame = 1

Query: 152 FNSLMRNFSRAGLFQESINLFTTMKSHGVSPSIVTFNSLLTILLKRGRTNMAKNVYDEML 211
           FN+L++     G   E++ L   M  +G  P +VT+NS++  + + G T++A ++  +M 
Sbjct: 161 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM- 220

Query: 212 STYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDGLCRGGKV 271
               V  D FT++ +I   C +G +D    +FK++   G +  V+TYN+LV GLC+ GK 
Sbjct: 221 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 280

Query: 272 TIAYNVVKAMGKKSVDLNPNVVTYTTLIRGYCAKREINNALAVFEEMVNLGLKANNITYN 331
                ++K M   S ++ PNV+T+  L+  +  + ++  A  +++EM+  G+  N ITYN
Sbjct: 281 NDGALLLKDM--VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 340

Query: 332 TLIKGLCEAEKFEKVKEILEATAVDGTFSPDTCTFNTLMHCHCDAGNLDEALRVFERMTK 391
           TL+ G C   +  +   +L+   V    SPD  TF +L+  +C    +D+ ++VF  ++K
Sbjct: 341 TLMDGYCMQNRLSEANNMLD-LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 400

Query: 392 LKIRPDSATYSVLIRSLCEGKYYEKAENLLDKLLEKRILLSDDGCKPLVAAYNPIFKYLC 451
             +  ++ TYS+L++  C+    + AE L  +++   +L       P V  Y  +   LC
Sbjct: 401 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL-------PDVMTYGILLDGLC 460

Query: 452 ENGKAKKAETVFRQLMR-RGTQDPPSYKTLIMGHCNEGTFESGYELLVLMLRKDFLPDME 511
           +NGK +KA  +F  L + +       Y T+I G C  G  E  + L   +  K   P++ 
Sbjct: 461 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 520

Query: 512 VYEALINGFLHKDKPLLALQTLEKMLRSSHLPESSTFHSILEKLLEQGNASESASLIQLM 571
            Y  +I+G   K     A   L KM    + P   T+++++   L  G+ + SA LI+ M
Sbjct: 521 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 580

Query: 572 LDKNIRQNLGFS--TGCIRLLFE---AGINDKAF 600
                 ++ GFS     I+++ +   +G  DK+F
Sbjct: 581 ------KSCGFSADASSIKMVIDMLLSGELDKSF 597

BLAST of CmoCh06G009910 vs. TrEMBL
Match: A0A0A0KYI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G358710 PE=4 SV=1)

HSP 1 Score: 1188.7 bits (3074), Expect = 0.0e+00
Identity = 595/709 (83.92%), Postives = 638/709 (89.99%), Query Frame = 1

Query: 1   MAVISSFKDGAAVVFRRQSSNMHRRLPFLRCYSSRLTEAETKSSNRTKKARDMARMINSK 60
           MA +   K  A V+F  QS N  R LP LRCYSSRLTE +TKSS +T KA  MA MINSK
Sbjct: 1   MAGLFISKHMAKVLFTSQSLNSFRCLPTLRCYSSRLTETKTKSSTKTVKATVMAEMINSK 60

Query: 61  PWSNDLESSLASFSPSLSKTTVLQTLGFLRDPSKALKFFNWAQEMGHAHTDQSYFSILEI 120
           PWS+DLESSLAS SPSLS+TTVLQTLGFLRD SKAL+FFNWAQEMG+ HT+QSYFS+LEI
Sbjct: 61  PWSSDLESSLASLSPSLSQTTVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEI 120

Query: 121 LGRNRHLNAARNFLFSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGV 180
           LGRNRHLN ARNFLFSIEKRSRG VKLEARFFNSLMRNF+RAGLFQESI +FT MKSHGV
Sbjct: 121 LGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGV 180

Query: 181 SPSIVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
           SPS+VTFNSLLTILLKRGRTNMAK VYDEMLSTYGVTPDTFTFNILIRGFCMNGMVD+GF
Sbjct: 181 SPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGF 240

Query: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRGGKVTIAYNVVKAMGKKSVDLNPNVVTYTTLIR 300
           RIF DLSRFGCEPDV+TYNTLVDGLCR GKVT+AYNVVK MGKKSVDLNPNVVTYTTLIR
Sbjct: 241 RIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIR 300

Query: 301 GYCAKREINNALAVFEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFS 360
           GYCAKREI  ALAVFEEMVN GLKANNITYNTLIKGLCEA KFEK+K+ILE TA DGTFS
Sbjct: 301 GYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFS 360

Query: 361 PDTCTFNTLMHCHCDAGNLDEALRVFERMTKLKIRPDSATYSVLIRSLCEGKYYEKAENL 420
           PDTCTFNTLMHCHC AGNLD+AL+VFERM++LKI+PDSATYS L+RSLC+G +YEKAE+L
Sbjct: 361 PDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDL 420

Query: 421 LDKLLEKRILLSDDGCKPLVAAYNPIFKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTL 480
           LDKLLE++ILLS DGCKPLVAAYNPIFKYLCE GK KKAE  FRQLMRRGTQDPPSYKTL
Sbjct: 421 LDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTL 480

Query: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDMEVYEALINGFLHKDKPLLALQTLEKMLRSSH 540
           IMGHC EGTFESGYELLVLMLRKDFLPD E YE+LING LH DKPLLALQ+LEKMLRSSH
Sbjct: 481 IMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSH 540

Query: 541 LPESSTFHSILEKLLEQGNASESASLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQ 600
            P SSTFHSIL KLLEQG  SESASLIQLMLDKNIRQNL FSTGC+RLLF AG+NDKAFQ
Sbjct: 541 RPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQ 600

Query: 601 IVRMLYGNGYSVKMEELILFLCHCKKYIEASKMLLFSLESHQAVDIDVCSAVIFHLCQIN 660
           +V +LYG GYSVKMEELI +LCHC+K I+ SK+LLFSLESHQ VD+D+C+ VIF LC+IN
Sbjct: 601 LVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEIN 660

Query: 661 KLSEAFGLYYKLVEMGVHQQLSCLNQLKASLEAGGKFEEVEFVSKRMEP 710
           KLSEAF LYYKLVEMGVHQQLSC NQLK SLEAG K EE EFVSKRMEP
Sbjct: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMEP 709

BLAST of CmoCh06G009910 vs. TrEMBL
Match: M5XMS8_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016282mg PE=4 SV=1)

HSP 1 Score: 925.6 bits (2391), Expect = 3.6e-266
Identity = 474/701 (67.62%), Postives = 563/701 (80.31%), Query Frame = 1

Query: 14  VFRRQSSNMHRRLPFLRCYS---SRLTEAETKSSN-RTKKARDMARMINSKPWSNDLESS 73
           VFR+Q  +     P L+  S   S L   + KSS  +TK A+DMAR++N+  WS++LESS
Sbjct: 14  VFRKQLFS-----PSLKSNSQPDSFLRAKQPKSSTPKTKTAKDMARLVNTNTWSSELESS 73

Query: 74  LASFSPSLSKTTVLQTLGFLRDPSKALKFFNWAQEMGHAHTDQSYFSILEILGRNRHLNA 133
           L++ S SLSKTTV QTL  ++ P KAL+FF W + MG +H DQSYF +LEILGR R+LNA
Sbjct: 74  LSTISSSLSKTTVHQTLHLIKTPHKALQFFKWVEVMGFSHNDQSYFLMLEILGRARNLNA 133

Query: 134 ARNFLFSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGVSPSIVTFNS 193
           ARN LFSIEKRS GAVKLE RFFNSL+RN+ RAGLFQESI LFTTMKS GVSPS+V+FNS
Sbjct: 134 ARNLLFSIEKRSNGAVKLEDRFFNSLIRNYGRAGLFQESIKLFTTMKSLGVSPSVVSFNS 193

Query: 194 LLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRF 253
           LL+ILLK+GRTNMAKNVYDEMLS YGVTPDT+TFNILIRGFCMN MVDEG+R FKD+S F
Sbjct: 194 LLSILLKKGRTNMAKNVYDEMLSMYGVTPDTYTFNILIRGFCMNSMVDEGYRFFKDMSGF 253

Query: 254 GCEPDVITYNTLVDGLCRGGKVTIAYNVVKAMGKKSVDLNPNVVTYTTLIRGYCAKREIN 313
            C+PDVITYNTLVDGLCR GKV IA+NVV  M K+S DL PNVVTYTTLIRGYC K+EI+
Sbjct: 254 RCDPDVITYNTLVDGLCRAGKVEIAHNVVNGMSKRSGDLTPNVVTYTTLIRGYCVKQEID 313

Query: 314 NALAVFEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFSPDTCTFNTL 373
            AL++ EEM   GLK N  TYNTLIKGLCEA+K +K+KEI E T + G F+PDTCTFNTL
Sbjct: 314 KALSILEEMTTRGLKPNGFTYNTLIKGLCEAQKLDKIKEIFEGTMIGGEFTPDTCTFNTL 373

Query: 374 MHCHCDAGNLDEALRVFERMTKLKIRPDSATYSVLIRSLCEGKYYEKAENLLDKLLEKRI 433
           MH HC+AGNLDEAL+VF +M++LK+ PDSATYSVLI SLC+   Y +AE L D+L +K I
Sbjct: 374 MHSHCNAGNLDEALKVFAKMSELKVPPDSATYSVLICSLCQRGDYPRAEELFDELSKKEI 433

Query: 434 LLSDDGCKPLVAAYNPIFKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTLIMGHCNEGT 493
           LL DDGCKPLVA+YNPIF YL  NGK +KAE VFRQLMRRGTQDP SYKTLIMG+C EGT
Sbjct: 434 LLRDDGCKPLVASYNPIFGYLSSNGKTQKAEEVFRQLMRRGTQDPLSYKTLIMGNCKEGT 493

Query: 494 FESGYELLVLMLRKDFLPDMEVYEALINGFLHKDKPLLALQTLEKMLRSSHLPESSTFHS 553
           +E+GYELLV MLR+DF+PD E+Y +LI+G L K KPLLA QTLEKML+SSHLP++STFHS
Sbjct: 494 YEAGYELLVWMLRRDFVPDEEIYVSLIDGLLQKGKPLLAQQTLEKMLKSSHLPQTSTFHS 553

Query: 554 ILEKLLEQGNASESASLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQIVRMLYGNG 613
           +L +LL+Q  A ESAS + LML+K IRQN+  ST  +RLLF  G+ DKAF+IV MLY NG
Sbjct: 554 LLAELLKQHCAHESASFVTLMLEKKIRQNINLSTHLVRLLFSHGLRDKAFEIVGMLYENG 613

Query: 614 YSVKMEELILFLCHCKKYIEASKMLLFSLESHQAVDIDVCSAVIFHLCQINKLSEAFGLY 673
           YS+KMEEL+ FLC  +K +EA +ML FSL+ HQ+VDID  + VI  LC INKLSEAFGLY
Sbjct: 614 YSIKMEELVCFLCQSRKLLEACEMLQFSLQKHQSVDIDNFNQVIVGLCDINKLSEAFGLY 673

Query: 674 YKLVEMGVHQQLSCLNQLKASLEAGGKFEEVEFVSKRMEPQ 711
           Y+LVE   +QQL CL+ LK++LE  G+  E EF+SKR+  Q
Sbjct: 674 YELVENKGYQQLPCLDSLKSALEVAGRSVEAEFLSKRIPRQ 709

BLAST of CmoCh06G009910 vs. TrEMBL
Match: B9RD38_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1609310 PE=3 SV=1)

HSP 1 Score: 908.3 bits (2346), Expect = 5.9e-261
Identity = 459/717 (64.02%), Postives = 559/717 (77.96%), Query Frame = 1

Query: 1   MAVISSFKDGAAVVFRRQSSNMHRRLPFLRCYSSRLTEAET----------KSSNRTKKA 60
           MA  SS    A    +  S  +H  L   R YS  +T  E           ++S +TKKA
Sbjct: 1   MATASSQSRPALQFSKLNSQKLHAAL---RYYSQDITNREDEERNDVVRPKRASTKTKKA 60

Query: 61  RDMARMINSKPWSNDLESSLASFSPSLSKTTVLQTLGFLRDPSKALKFFNWAQEMGHAHT 120
           + MAR+INSKPWS +LESSL+S SPS+SKTTV + L  ++ PSKAL+FFNWA E+G  H 
Sbjct: 61  KSMARLINSKPWSTELESSLSSLSPSISKTTVFEVLRLIKTPSKALQFFNWAPELGFTHN 120

Query: 121 DQSYFSILEILGRNRHLNAARNFLFSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESIN 180
           DQSYF +LEILGR R+LN ARNFLFSI++RS G VKLE RFFNSL+R++ +AGLFQES+ 
Sbjct: 121 DQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAGLFQESVQ 180

Query: 181 LFTTMKSHGVSPSIVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGF 240
           +F +MKS GVSPS+VTFNSLL ILLKRGRTNMA++V+DEMLSTYGVTPDT+TFNILIRGF
Sbjct: 181 VFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGF 240

Query: 241 CMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDGLCRGGKVTIAYNVVKAMGKKSVDLNP 300
           C N MVDEGFR FK++SRF C+PD++TYNTLVDGLCR GKV IA+NVV  M KKS +LNP
Sbjct: 241 CKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNP 300

Query: 301 NVVTYTTLIRGYCAKREINNALAVFEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEIL 360
           +VVTYTTL+RGYC K EI+ AL VFEEMV+ GLK N ITYNTLIKGLCE +K +K+K+I 
Sbjct: 301 DVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIF 360

Query: 361 EATAVDGTFSPDTCTFNTLMHCHCDAGNLDEALRVFERMTKLKIRPDSATYSVLIRSLCE 420
           E     G F PDTCT NTLM+ HC+AGNL++AL VFE+M  L +RPDSATYSVLIR+LC+
Sbjct: 361 EGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQ 420

Query: 421 GKYYEKAENLLDKLLEKRILLSDDGCKPLVAAYNPIFKYLCENGKAKKAETVFRQLMRRG 480
              +E+AE L D+L EK ILL DDGC PLVAAY  +F++LC NGK  KAE VFRQLM+RG
Sbjct: 421 RGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRG 480

Query: 481 TQDPPSYKTLIMGHCNEGTFESGYELLVLMLRKDFLPDMEVYEALINGFLHKDKPLLALQ 540
           TQDP S+K LI GHC EGTFE+GYELLVLMLR+DF+PD+E Y++LI+G L K +PL+A Q
Sbjct: 481 TQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQ 540

Query: 541 TLEKMLRSSHLPESSTFHSILEKLLEQGNASESASLIQLMLDKNIRQNLGFSTGCIRLLF 600
           TLEKM++SSH+PE+STFHSIL +LL +G A ESA  I LML+  IRQN+  ST  +RLLF
Sbjct: 541 TLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLF 600

Query: 601 EAGINDKAFQIVRMLYGNGYSVKMEELILFLCHCKKYIEASKMLLFSLESHQAVDIDVCS 660
            +G+ DKAF+IV +LY NGY V MEELI FL H +K++ A K+LLF LE HQ VDID+C 
Sbjct: 601 GSGLRDKAFKIVGLLYANGYVVDMEELIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMCD 660

Query: 661 AVIFHLCQINKLSEAFGLYYKLVEMGVHQQLSCLNQLKASLEAGGKFEEVEFVSKRM 708
            VI  LC++ + SEAFGLYY+LVE G +Q L CL  L+ +LEA G+ EEV+F+SKRM
Sbjct: 661 TVIEGLCKMKRHSEAFGLYYELVEKGNNQPLRCLENLRVALEARGRLEEVKFLSKRM 714

BLAST of CmoCh06G009910 vs. TrEMBL
Match: A0A061DVE7_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma cacao GN=TCM_046993 PE=4 SV=1)

HSP 1 Score: 906.0 bits (2340), Expect = 3.0e-260
Identity = 454/693 (65.51%), Postives = 553/693 (79.80%), Query Frame = 1

Query: 29  LRCYSSRLTEAET--------------KSSNRTKKARDMARMINSKPWSNDLESSLASFS 88
           LRC+SSR ++  +              KSS +TK+A+ MAR+INS PWS++LESSL+S S
Sbjct: 26  LRCFSSRQSKTHSDGADEQKRGWDDKAKSSTKTKRAKSMARVINSTPWSSELESSLSSLS 85

Query: 89  PSLSKTTVLQTLGFLRDPSKALKFFNWAQEMGHAHTDQSYFSILEILGRNRHLNAARNFL 148
           PSLSKTTVLQTL  ++ PSKAL+FF+W Q+MG  H  QS+F ILEILG+ R+LNAARN L
Sbjct: 86  PSLSKTTVLQTLRLIKAPSKALQFFDWVQKMGFPHNAQSFFLILEILGKERNLNAARNLL 145

Query: 149 FSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGVSPSIVTFNSLLTIL 208
            SIEKRS G+VKLE +FFNSL+R++ +AGLFQESI +F TMK  GVSPS+V+FN+LL IL
Sbjct: 146 LSIEKRSNGSVKLEDQFFNSLIRSYGKAGLFQESIKVFETMKGIGVSPSVVSFNNLLMIL 205

Query: 209 LKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPD 268
           LKRGRTNMAK+V+DEMLSTYGV+PD +TFNILIRGFCMN MVDEGFR FK++ RF C+PD
Sbjct: 206 LKRGRTNMAKSVFDEMLSTYGVSPDVYTFNILIRGFCMNSMVDEGFRFFKEMERFKCDPD 265

Query: 269 VITYNTLVDGLCRGGKVTIAYNVVKAMGKKSVDLNPNVVTYTTLIRGYCAKREINNALAV 328
           V+TYNT+VDGLCR GKV IA NVV+ M KKS+DLNPNVVTYTTL+RGYC K+EI+ AL V
Sbjct: 266 VVTYNTIVDGLCRAGKVGIARNVVRGMSKKSLDLNPNVVTYTTLVRGYCMKQEIDEALVV 325

Query: 329 FEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFSPDTCTFNTLMHCHC 388
           F+EM++  L+ N ITYNTLIKGL E  ++EK+KEILE    DG F PDTCT NTL++ HC
Sbjct: 326 FKEMISRRLRPNRITYNTLIKGLSEVHEYEKIKEILEGMGEDGRFVPDTCTLNTLINAHC 385

Query: 389 DAGNLDEALRVFERMTKLKIRPDSATYSVLIRSLCEGKYYEKAENLLDKLLEKRILLSDD 448
           +A N+DEAL VF+RM++L + PDSATYSV+IRSLC+   +EKAE   D+L EK ILLSD 
Sbjct: 386 NAENMDEALNVFKRMSELNVLPDSATYSVIIRSLCQRGDFEKAEEFFDELAEKEILLSDV 445

Query: 449 GCKPLVAAYNPIFKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTLIMGHCNEGTFESGY 508
           GC PLVAAYNP+F+YLC NGK KKAE VFRQLM+RG QDPP+YKTLI+GHC EGTF+ GY
Sbjct: 446 GCTPLVAAYNPMFEYLCGNGKTKKAEIVFRQLMKRGRQDPPAYKTLILGHCREGTFKDGY 505

Query: 509 ELLVLMLRKDFLPDMEVYEALINGFLHKDKPLLALQTLEKMLRSSHLPESSTFHSILEKL 568
           ELLVLMLR+DF P  E+Y++LI G L K +PLLA  TLEKML+SSHLP++S+ HSIL +L
Sbjct: 506 ELLVLMLRRDFEPGFEIYDSLICGLLQKGEPLLAHLTLEKMLKSSHLPQTSSVHSILAEL 565

Query: 569 LEQGNASESASLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQIVRMLYGNGYSVKM 628
           L++  A E+ASL+ LMLD  IRQN+  ST   +LLF   + DKAFQI+ +LY NGY V+M
Sbjct: 566 LKKSCAQEAASLVTLMLDTRIRQNVNLSTQTAKLLFARRLQDKAFQIIGLLYDNGYVVEM 625

Query: 629 EELILFLCHCKKYIEASKMLLFSLESHQAVDIDVCSAVIFHLCQINKLSEAFGLYYKLVE 688
           EEL+ FLC   K +EA KML FSLE H++VDI++CS VI  LC   +LSEAFGLYY+LVE
Sbjct: 626 EELVGFLCQSGKLLEACKMLQFSLEKHKSVDIEMCSMVIEGLCNSKRLSEAFGLYYELVE 685

Query: 689 MGVHQQLSCLNQLKASLEAGGKFEEVEFVSKRM 708
            G HQQL CL  LK +LEAGG+ +E EFVSKRM
Sbjct: 686 RGKHQQLRCLENLKIALEAGGRLDEAEFVSKRM 718

BLAST of CmoCh06G009910 vs. TrEMBL
Match: W9RM83_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024133 PE=4 SV=1)

HSP 1 Score: 901.0 bits (2327), Expect = 9.5e-259
Identity = 453/696 (65.09%), Postives = 550/696 (79.02%), Query Frame = 1

Query: 29  LRCYSSRLT----EAETK------------SSNRTKKARDMARMINSKPWSNDLESSLAS 88
           LRCYS + T    E E K            SS++TK+A++M+R+IN+ PWS DLESSL+S
Sbjct: 71  LRCYSRQRTNNSGENEEKNQNEDVMEKPRPSSSKTKRAKEMSRLINTNPWSTDLESSLSS 130

Query: 89  FSP-SLSKTTVLQTLGFLRDPSKALKFFNWAQEMGHAHTDQSYFSILEILGRNRHLNAAR 148
             P  LSKTTVLQTL  +  PSKA +FF W  +MG +H DQS F +LEILGR+R+LNAAR
Sbjct: 131 LFPFPLSKTTVLQTLRLITSPSKAFQFFKWVPQMGFSHNDQSCFMMLEILGRSRNLNAAR 190

Query: 149 NFLFSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGVSPSIVTFNSLL 208
           NFLFSIEK+S G+VKLE RFFNSL+R++  AGLFQES+ LF+TMK   ++PS+VTFNSLL
Sbjct: 191 NFLFSIEKKSNGSVKLEDRFFNSLIRSYGNAGLFQESVKLFSTMKELAIAPSVVTFNSLL 250

Query: 209 TILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGC 268
            +LLKRGRTNMA+NV+DEML TYGV PDTFTFN+LIRGFCMN MVDEGF  FK++SRF C
Sbjct: 251 LVLLKRGRTNMARNVFDEMLGTYGVEPDTFTFNVLIRGFCMNSMVDEGFHFFKEMSRFKC 310

Query: 269 EPDVITYNTLVDGLCRGGKVTIAYNVVKAMGKKSVDLNPNVVTYTTLIRGYCAKREINNA 328
           EPDV+TYNTLVDGLCR GKV IA NVVK M KKSVDLNPN+VTYTTLI+GYC K+EI+ A
Sbjct: 311 EPDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKSVDLNPNIVTYTTLIKGYCGKQEIDEA 370

Query: 329 LAVFEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFSPDTCTFNTLMH 388
           L V +EM   GLK N ITYNTLIKGLCEA+K + V++IL+ T   G F P+TCTFNTL+H
Sbjct: 371 LLVLKEMTERGLKPNGITYNTLIKGLCEAQKLDDVRKILDGTMRRGEFVPNTCTFNTLIH 430

Query: 389 CHCDAGNLDEALRVFERMTKLKIRPDSATYSVLIRSLCEGKYYEKAENLLDKLLEKRILL 448
            HC AG LDEAL+VFE+M +L++  DSATYS LIRSLC+   Y +AE L DKL +K ILL
Sbjct: 431 THCQAGRLDEALKVFEKMLELQVLQDSATYSALIRSLCQRGDYIRAEELFDKLSDKEILL 490

Query: 449 SDDGCKPLVAAYNPIFKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTLIMGHCNEGTFE 508
           SDDGC+P+VAAYNP+F++LC NGK KKAE VFRQLM+RGTQDPPSYKTLIMGHC EGTFE
Sbjct: 491 SDDGCRPIVAAYNPMFEHLCRNGKTKKAERVFRQLMKRGTQDPPSYKTLIMGHCREGTFE 550

Query: 509 SGYELLVLMLRKDFLPDMEVYEALINGFLHKDKPLLALQTLEKMLRSSHLPESSTFHSIL 568
           +GYELLVLMLR+DF+PD E+YE+LI G L KDKPLLA  TLEKMLRSSHLP +S FH IL
Sbjct: 551 AGYELLVLMLRRDFVPDAEIYESLITGLLQKDKPLLAKTTLEKMLRSSHLPRASAFHCIL 610

Query: 569 EKLLEQGNASESASLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQIVRMLYGNGYS 628
           E+LL++G A ESAS   LML++  RQN+  ST  I LLF  G+ DKAF+++++LY +GYS
Sbjct: 611 EELLKKGCAKESASFATLMLEQKFRQNITLSTNLITLLFSNGLGDKAFELIKVLYESGYS 670

Query: 629 VKMEELILFLCHCKKYIEASKMLLFSLESHQAVDIDVCSAVIFHLCQINKLSEAFGLYYK 688
           VK+EEL+ FLC   K +EA K+L FSL+ +Q+V I++ + VI  L +I ++SEAF LYYK
Sbjct: 671 VKIEELVSFLCQKSKLLEACKLLQFSLQKNQSVGIEIFNKVIGGLSKIRRVSEAFDLYYK 730

Query: 689 LVEMGVHQQLSCLNQLKASLEAGGKFEEVEFVSKRM 708
           LVE GVH +L CL  LK +L+  G+  E +FVSKRM
Sbjct: 731 LVEKGVHHRLVCLEDLKTALKLAGRSAEADFVSKRM 766

BLAST of CmoCh06G009910 vs. TAIR10
Match: AT1G02060.1 (AT1G02060.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 799.3 bits (2063), Expect = 2.0e-231
Identity = 399/684 (58.33%), Postives = 518/684 (75.73%), Query Frame = 1

Query: 27  PFLRCYSSRLTEAETKSSNRTKKARDMARMINSKPWSNDLESSLASFSPS--LSKTTVLQ 86
           P LR       E  TKS    K AR +AR +NS PWS++LESSL+S  PS  +S+TTVLQ
Sbjct: 18  PVLRAAKVTNEERSTKS----KLARSLARAVNSNPWSDELESSLSSLHPSQTISRTTVLQ 77

Query: 87  TLGFLRDPSKALKFFNWAQEMGHAHTDQSYFSILEILGRNRHLNAARNFLFSIEKRSRGA 146
           TL  ++ P+  L+FF+W    G +H +QS+F +LE LGR R+LN ARNFLFSIE+RS G 
Sbjct: 78  TLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGC 137

Query: 147 VKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGVSPSIVTFNSLLTILLKRGRTNMAK 206
           VKL+ R+FNSL+R++  AGLFQES+ LF TMK  G+SPS++TFNSLL+ILLKRGRT MA 
Sbjct: 138 VKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAH 197

Query: 207 NVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDG 266
           +++DEM  TYGVTPD++TFN LI GFC N MVDE FRIFKD+  + C PDV+TYNT++DG
Sbjct: 198 DLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDG 257

Query: 267 LCRGGKVTIAYNVVKAMGKKSVDLNPNVVTYTTLIRGYCAKREINNALAVFEEMVNLGLK 326
           LCR GKV IA+NV+  M KK+ D++PNVV+YTTL+RGYC K+EI+ A+ VF +M++ GLK
Sbjct: 258 LCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLK 317

Query: 327 ANNITYNTLIKGLCEAEKFEKVKEIL-EATAVDGTFSPDTCTFNTLMHCHCDAGNLDEAL 386
            N +TYNTLIKGL EA +++++K+IL        TF+PD CTFN L+  HCDAG+LD A+
Sbjct: 318 PNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAM 377

Query: 387 RVFERMTKLKIRPDSATYSVLIRSLCEGKYYEKAENLLDKLLEKRILLSDDGCKPLVAAY 446
           +VF+ M  +K+ PDSA+YSVLIR+LC    +++AE L ++L EK +LL  D CKPL AAY
Sbjct: 378 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 437

Query: 447 NPIFKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTLIMGHCNEGTFESGYELLVLMLRK 506
           NP+F+YLC NGK K+AE VFRQLM+RG QDPPSYKTLI GHC EG F+  YELLVLMLR+
Sbjct: 438 NPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRR 497

Query: 507 DFLPDMEVYEALINGFLHKDKPLLALQTLEKMLRSSHLPESSTFHSILEKLLEQGNASES 566
           +F+PD+E YE LI+G L   + LLA  TL++MLRSS+LP ++TFHS+L +L ++  A+ES
Sbjct: 498 EFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANES 557

Query: 567 ASLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQIVRMLYGNGYSVKMEELILFLCH 626
             L+ LML+K IRQN+  ST  +RLLF +   +KAF IVR+LY NGY VKMEEL+ +LC 
Sbjct: 558 FCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCE 617

Query: 627 CKKYIEASKMLLFSLESHQAVDIDVCSAVIFHLCQINKLSEAFGLYYKLVEMGVHQQLSC 686
            +K ++A  ++LF LE  Q VDID C+ VI  LC+  + SEAF LY +LVE+G HQQLSC
Sbjct: 618 NRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSC 677

Query: 687 LNQLKASLEAGGKFEEVEFVSKRM 708
              L+ +LEA GK+EE++FVSKRM
Sbjct: 678 HVVLRNALEAAGKWEELQFVSKRM 697

BLAST of CmoCh06G009910 vs. TAIR10
Match: AT2G37230.1 (AT2G37230.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 362.5 bits (929), Expect = 6.2e-100
Identity = 215/671 (32.04%), Postives = 357/671 (53.20%), Query Frame = 1

Query: 42  KSSNRTKKARDMARMINSKPWSNDLESSLASFSPSLSKTTVLQTLGFLRDPSKALKFFNW 101
           K  N  K    + RM++++ W+  L++S+    P    + V   L   +    AL+FF W
Sbjct: 80  KRQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRW 139

Query: 102 AQEMGHAHTDQ-SYFSILEILGRNRHLNAARNFLFSIEKRSRGAVKLEARFFNSLMRNFS 161
            +  G    D+ ++  ++++LG    LN AR  L  + ++    V  +   F  L+ ++ 
Sbjct: 140 TERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKG---VPWDEDMFVVLIESYG 199

Query: 162 RAGLFQESINLFTTMKSHGVSPSIVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDT 221
           +AG+ QES+ +F  MK  GV  +I ++NSL  ++L+RGR  MAK  +++M+S  GV P  
Sbjct: 200 KAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSE-GVEPTR 259

Query: 222 FTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDGLCRGGKVTIAYNVVKA 281
            T+N+++ GF ++  ++   R F+D+   G  PD  T+NT+++G CR  K+  A  +   
Sbjct: 260 HTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVE 319

Query: 282 MGKKSVDLNPNVVTYTTLIRGYCAKREINNALAVFEEMVNLGLKANNITYNTLIKGLCEA 341
           M  K   + P+VV+YTT+I+GY A   +++ L +FEEM + G++ N  TY+TL+ GLC+A
Sbjct: 320 M--KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDA 379

Query: 342 EKFEKVKEILEATAVDGTFSPDTCTFNTLMHCHCDAGNLDEALRVFERMTKLKIRPDSAT 401
            K  + K IL+          D   F  L+     AG++  A  V + M  L +  ++  
Sbjct: 380 GKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGH 439

Query: 402 YSVLIRSLCEGKYYEKAENLLDKLLEKRILLS-DDGCKPLVAAYNPIFKYLCENGKAKKA 461
           Y VLI + C+   Y +A  LLD L+EK I+L   D  +   +AYNPI +YLC NG+  KA
Sbjct: 440 YGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKA 499

Query: 462 ETVFRQLMRRGTQDPPSYKTLIMGHCNEGTFESGYELLVLMLRKDFLPDMEVYEALINGF 521
           E +FRQLM+RG QD  +   LI GH  EG  +S YE+L +M R+    +   YE LI  +
Sbjct: 500 EVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSY 559

Query: 522 LHKDKPLLALQTLEKMLRSSHLPESSTFHSILEKLLEQGNASESASLIQLMLDKN--IRQ 581
           + K +P  A   L+ M+   H+P+SS F S++E L E G    ++ ++ +M+DKN  I  
Sbjct: 560 MSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIED 619

Query: 582 NLGFSTGCIRLLFEAGINDKAFQIVRMLYGNGYSVKMEELILFLCHCKKYIEASKMLLFS 641
           N+      +  L   G  ++A   + +L  NG++  ++ L+  L    K I A K+L F 
Sbjct: 620 NMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLSVLSEKGKTIAALKLLDFG 679

Query: 642 LESHQAVDIDVCSAVIFHLCQINKLSEAFGLYYKLVEMGVHQQLSCLNQLKASLEAGGKF 701
           LE   +++      V+  L    K   A+ +  K++E G        ++L  SL   G  
Sbjct: 680 LERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNT 739

Query: 702 EEVEFVSKRME 709
           ++ + +S+ ++
Sbjct: 740 KQADVLSRMIK 744

BLAST of CmoCh06G009910 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 229.2 bits (583), Expect = 8.1e-60
Identity = 139/522 (26.63%), Postives = 254/522 (48.66%), Query Frame = 1

Query: 71  ASFSPSLSKTTVLQTLGFLRDPSKALKFFNWAQEMG-----------HAHTDQSYFSILE 130
           A+F+P  +   +L++     D +  LKF NWA               H  T    +   +
Sbjct: 44  ANFTPEAASNLLLKSQN---DQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQ 103

Query: 131 ILGRNRHLNAA----RNFLFSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTM 190
           IL  +           + +F   + +       +  F+ +++++SR  L  +++++    
Sbjct: 104 ILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLA 163

Query: 191 KSHGVSPSIVTFNSLLTILLKRGRT-NMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNG 250
           ++HG  P ++++N++L   ++  R  + A+NV+ EML +  V+P+ FT+NILIRGFC  G
Sbjct: 164 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ-VSPNVFTYNILIRGFCFAG 223

Query: 251 MVDEGFRIFKDLSRFGCEPDVITYNTLVDGLCRGGKVTIAYNVVKAMGKKSVDLNPNVVT 310
            +D    +F  +   GC P+V+TYNTL+DG C+  K+   + ++++M  K   L PN+++
Sbjct: 224 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG--LEPNLIS 283

Query: 311 YTTLIRGYCAKREINNALAVFEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATA 370
           Y  +I G C +  +     V  EM   G   + +TYNTLIKG C+   F +   ++ A  
Sbjct: 284 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL-VMHAEM 343

Query: 371 VDGTFSPDTCTFNTLMHCHCDAGNLDEALRVFERMTKLKIRPDSATYSVLIRSLCEGKYY 430
           +    +P   T+ +L+H  C AGN++ A+   ++M    + P+  TY+ L+    +  Y 
Sbjct: 344 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 403

Query: 431 EKAENLLDKLLEKRILLSDDGCKPLVAAYNPIFKYLCENGKAKKAETVFRQLMRRG-TQD 490
            +A  +L +       ++D+G  P V  YN +    C  GK + A  V   +  +G + D
Sbjct: 404 NEAYRVLRE-------MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 463

Query: 491 PPSYKTLIMGHCNEGTFESGYELLVLMLRKDFLPDMEVYEALINGFLHKDKPLLALQTLE 550
             SY T++ G C     +    +   M+ K   PD   Y +LI GF  + +   A    E
Sbjct: 464 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 523

Query: 551 KMLRSSHLPESSTFHSILEKLLEQGNASESASLIQLMLDKNI 576
           +MLR    P+  T+ +++     +G+  ++  L   M++K +
Sbjct: 524 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551

BLAST of CmoCh06G009910 vs. TAIR10
Match: AT5G65560.1 (AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 217.6 bits (553), Expect = 2.4e-56
Identity = 155/552 (28.08%), Postives = 263/552 (47.64%), Query Frame = 1

Query: 146 KLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGVSPSIVTFNSLLTILLKRGRTNMAKN 205
           KL    +N+L+ + +R GL  E   ++  M    V P+I T+N ++    K G    A N
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA-N 239

Query: 206 VYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVITYNTLVDGL 265
            Y   +   G+ PD FT+  LI G+C    +D  F++F ++   GC  + + Y  L+ GL
Sbjct: 240 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 299

Query: 266 CRGGKVTIAYNVVKAMGKKSVDLNPNVVTYTTLIRGYCAKREINNALAVFEEMVNLGLKA 325
           C   ++  A ++   M  K  +  P V TYT LI+  C     + AL + +EM   G+K 
Sbjct: 300 CVARRIDEAMDLFVKM--KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 359

Query: 326 NNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFSPDTCTFNTLMHCHCDAGNLDEALRV 385
           N  TY  LI  LC   KFEK +E+L      G   P+  T+N L++ +C  G +++A+ V
Sbjct: 360 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKG-LMPNVITYNALINGYCKRGMIEDAVDV 419

Query: 386 FERMTKLKIRPDSATYSVLIRSLCEGKYYEKAENLLDKLLEKRILLSDDGCKPLVAAYNP 445
            E M   K+ P++ TY+ LI+  C+   + KA  +L+K+LE+++L       P V  YN 
Sbjct: 420 VELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVL-------PDVVTYNS 479

Query: 446 IFKYLCENGKAKKAETVFRQLMRRG-TQDPPSYKTLIMGHCNEGTFESGYELLVLMLRKD 505
           +    C +G    A  +   +  RG   D  +Y ++I   C     E   +L   + +K 
Sbjct: 480 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 539

Query: 506 FLPDMEVYEALINGFLHKDKPLLALQTLEKMLRSSHLPESSTFHSILEKLLEQGNASESA 565
             P++ +Y ALI+G+    K   A   LEKML  + LP S TF++++  L   G   E+ 
Sbjct: 540 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 599

Query: 566 SLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQIVRMLYGNGYSVKMEELILFL--- 625
            L + M+   ++  +   T  I  L + G  D A+   + +  +G          F+   
Sbjct: 600 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 659

Query: 626 CHCKKYIEASKMLLFSLESHQAVDIDVCSAVIFHLCQINKLSEAFGLYYKLVEMGVH-QQ 685
           C   + ++A  M+    E+  + D+   S++I     + + + AF +  ++ + G    Q
Sbjct: 660 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 719

Query: 686 LSCLNQLKASLE 693
            + L+ +K  LE
Sbjct: 720 HTFLSLIKHLLE 719

BLAST of CmoCh06G009910 vs. TAIR10
Match: AT1G12700.1 (AT1G12700.1 ATP binding;nucleic acid binding;helicases)

HSP 1 Score: 205.7 bits (522), Expect = 9.6e-53
Identity = 127/427 (29.74%), Postives = 222/427 (51.99%), Query Frame = 1

Query: 113 SYFSILEILGRNRHLNAARNFLFSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLF 172
           +Y SI+  + R+   + A + L  +E+R+   VK +   +++++ +  R G    +I+LF
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERN---VKADVFTYSTIIDSLCRDGCIDAAISLF 254

Query: 173 TTMKSHGVSPSIVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCM 232
             M++ G+  S+VT+NSL+  L K G+ N    +  +M+S   + P+  TFN+L+  F  
Sbjct: 255 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVFVK 314

Query: 233 NGMVDEGFRIFKDLSRFGCEPDVITYNTLVDGLCRGGKVTIAYNVVKAMGKKSVDLNPNV 292
            G + E   ++K++   G  P++ITYNTL+DG C   +++ A N++  M +     +P++
Sbjct: 315 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK--CSPDI 374

Query: 293 VTYTTLIRGYCAKREINNALAVFEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEA 352
           VT+T+LI+GYC  + +++ + VF  +   GL AN +TY+ L++G C++ K +  +E+ + 
Sbjct: 375 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 434

Query: 353 TAVDGTFSPDTCTFNTLMHCHCDAGNLDEALRVFERMTKLKIRPDSATYSVLIRSLCEGK 412
               G   PD  T+  L+   CD G L++AL +FE + K K+      Y+ +I  +C+G 
Sbjct: 435 MVSHGVL-PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 494

Query: 413 YYEKAENLLDKLLEKRILLSDDGCKPLVAAYNPIFKYLCENGKAKKAETVFRQLMRRG-T 472
             E A NL   L  K       G KP V  Y  +   LC+ G   +A  + R++   G  
Sbjct: 495 KVEDAWNLFCSLPCK-------GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 554

Query: 473 QDPPSYKTLIMGHCNEGTFESGYELLVLMLRKDFLPDMEVYEALINGFLHKDKPLLALQT 532
            +  +Y TLI  H  +G   +  +L+  M    F  D    + +I+  L   K L     
Sbjct: 555 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYC 607

Query: 533 LEKMLRS 539
           L K  +S
Sbjct: 615 LSKGSKS 607

BLAST of CmoCh06G009910 vs. NCBI nr
Match: gi|659086986|ref|XP_008444214.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g02060, chloroplastic [Cucumis melo])

HSP 1 Score: 1199.5 bits (3102), Expect = 0.0e+00
Identity = 599/709 (84.49%), Postives = 650/709 (91.68%), Query Frame = 1

Query: 1   MAVISSFKDGAAVVFRRQSSNMHRRLPFLRCYSSRLTEAETKSSNRTKKARDMARMINSK 60
           MA +S  K+ A V+F+ QS N + RLP LRCYSSRLTE  TKSS +T+KAR MARMINSK
Sbjct: 1   MAGLSISKNMATVLFKSQSLNSYPRLPTLRCYSSRLTETVTKSSTKTEKARAMARMINSK 60

Query: 61  PWSNDLESSLASFSPSLSKTTVLQTLGFLRDPSKALKFFNWAQEMGHAHTDQSYFSILEI 120
           PWS+DLESSLAS SPSLSKTTVLQTLGFLRDP KAL+FFNWAQEMG+ HT+QSYFS+LEI
Sbjct: 61  PWSSDLESSLASLSPSLSKTTVLQTLGFLRDPPKALQFFNWAQEMGYTHTEQSYFSMLEI 120

Query: 121 LGRNRHLNAARNFLFSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGV 180
           LGRNRHLN ARNFLFSIEKRSRG VKLEARFFNSLMRNFSRAGLFQESI +FT MKSHGV
Sbjct: 121 LGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFSRAGLFQESIKVFTIMKSHGV 180

Query: 181 SPSIVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
           SPS+VTFNSLLTILLKRGRTNMAKNVY EMLSTYGVTPDT+TFNILIRGFCMNGMVD+GF
Sbjct: 181 SPSVVTFNSLLTILLKRGRTNMAKNVYYEMLSTYGVTPDTYTFNILIRGFCMNGMVDDGF 240

Query: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRGGKVTIAYNVVKAMGKKSVDLNPNVVTYTTLIR 300
           RIF DL RFGCEPDV+TYNTLVDGLCR GKVT+AYN+ K MGKKSVDLNPNVVTYTTLIR
Sbjct: 241 RIFNDLPRFGCEPDVVTYNTLVDGLCRAGKVTVAYNLAKGMGKKSVDLNPNVVTYTTLIR 300

Query: 301 GYCAKREINNALAVFEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFS 360
           GYCAKREI+ ALAVFEEMVN GLKANNITYNTLIKGLCEA+KFEK+KEILEATA DGTFS
Sbjct: 301 GYCAKREIDKALAVFEEMVNQGLKANNITYNTLIKGLCEAQKFEKIKEILEATAGDGTFS 360

Query: 361 PDTCTFNTLMHCHCDAGNLDEALRVFERMTKLKIRPDSATYSVLIRSLCEGKYYEKAENL 420
           PDTCTFNTLMHCHC AGNLD+AL+VFERM++LKI+PDSATYSVL RSLC+G +YEKAE+L
Sbjct: 361 PDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSVLARSLCQGGHYEKAEDL 420

Query: 421 LDKLLEKRILLSDDGCKPLVAAYNPIFKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTL 480
           LDKLLE++ILLSDD CKPLVA+YNPIFKYLCENGK KKAE VFRQLMRRGTQDPPSYKTL
Sbjct: 421 LDKLLERKILLSDDSCKPLVASYNPIFKYLCENGKTKKAEKVFRQLMRRGTQDPPSYKTL 480

Query: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDMEVYEALINGFLHKDKPLLALQTLEKMLRSSH 540
           IMGHC EGTFESGYELLVLMLRKDFLPD E+YE+LING LH DKPLLALQ+LEKML+SSH
Sbjct: 481 IMGHCKEGTFESGYELLVLMLRKDFLPDFEIYESLINGLLHIDKPLLALQSLEKMLKSSH 540

Query: 541 LPESSTFHSILEKLLEQGNASESASLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQ 600
            P+SSTFHSIL KLLEQG+ASESASLIQLMLDKNIRQNL FSTGC+RLLF AG+NDKAF 
Sbjct: 541 RPKSSTFHSILAKLLEQGSASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFL 600

Query: 601 IVRMLYGNGYSVKMEELILFLCHCKKYIEASKMLLFSLESHQAVDIDVCSAVIFHLCQIN 660
           +V +LY  GYSVKMEELI +LCHC+K I+ASK+LLFSLESHQ VD+DVC+ VIF LC+I+
Sbjct: 601 LVHLLYKKGYSVKMEELIHYLCHCRKVIQASKLLLFSLESHQFVDMDVCNTVIFQLCEIS 660

Query: 661 KLSEAFGLYYKLVEMGVHQQLSCLNQLKASLEAGGKFEEVEFVSKRMEP 710
           KLSEAF LYYKLVEMGVHQQLSC NQLK SLEAG K EE EFVSKRMEP
Sbjct: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMEP 709

BLAST of CmoCh06G009910 vs. NCBI nr
Match: gi|449449910|ref|XP_004142707.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g02060, chloroplastic [Cucumis sativus])

HSP 1 Score: 1188.7 bits (3074), Expect = 0.0e+00
Identity = 595/709 (83.92%), Postives = 638/709 (89.99%), Query Frame = 1

Query: 1   MAVISSFKDGAAVVFRRQSSNMHRRLPFLRCYSSRLTEAETKSSNRTKKARDMARMINSK 60
           MA +   K  A V+F  QS N  R LP LRCYSSRLTE +TKSS +T KA  MA MINSK
Sbjct: 1   MAGLFISKHMAKVLFTSQSLNSFRCLPTLRCYSSRLTETKTKSSTKTVKATVMAEMINSK 60

Query: 61  PWSNDLESSLASFSPSLSKTTVLQTLGFLRDPSKALKFFNWAQEMGHAHTDQSYFSILEI 120
           PWS+DLESSLAS SPSLS+TTVLQTLGFLRD SKAL+FFNWAQEMG+ HT+QSYFS+LEI
Sbjct: 61  PWSSDLESSLASLSPSLSQTTVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEI 120

Query: 121 LGRNRHLNAARNFLFSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGV 180
           LGRNRHLN ARNFLFSIEKRSRG VKLEARFFNSLMRNF+RAGLFQESI +FT MKSHGV
Sbjct: 121 LGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGV 180

Query: 181 SPSIVTFNSLLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGF 240
           SPS+VTFNSLLTILLKRGRTNMAK VYDEMLSTYGVTPDTFTFNILIRGFCMNGMVD+GF
Sbjct: 181 SPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGF 240

Query: 241 RIFKDLSRFGCEPDVITYNTLVDGLCRGGKVTIAYNVVKAMGKKSVDLNPNVVTYTTLIR 300
           RIF DLSRFGCEPDV+TYNTLVDGLCR GKVT+AYNVVK MGKKSVDLNPNVVTYTTLIR
Sbjct: 241 RIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIR 300

Query: 301 GYCAKREINNALAVFEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFS 360
           GYCAKREI  ALAVFEEMVN GLKANNITYNTLIKGLCEA KFEK+K+ILE TA DGTFS
Sbjct: 301 GYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFS 360

Query: 361 PDTCTFNTLMHCHCDAGNLDEALRVFERMTKLKIRPDSATYSVLIRSLCEGKYYEKAENL 420
           PDTCTFNTLMHCHC AGNLD+AL+VFERM++LKI+PDSATYS L+RSLC+G +YEKAE+L
Sbjct: 361 PDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDL 420

Query: 421 LDKLLEKRILLSDDGCKPLVAAYNPIFKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTL 480
           LDKLLE++ILLS DGCKPLVAAYNPIFKYLCE GK KKAE  FRQLMRRGTQDPPSYKTL
Sbjct: 421 LDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTL 480

Query: 481 IMGHCNEGTFESGYELLVLMLRKDFLPDMEVYEALINGFLHKDKPLLALQTLEKMLRSSH 540
           IMGHC EGTFESGYELLVLMLRKDFLPD E YE+LING LH DKPLLALQ+LEKMLRSSH
Sbjct: 481 IMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSH 540

Query: 541 LPESSTFHSILEKLLEQGNASESASLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQ 600
            P SSTFHSIL KLLEQG  SESASLIQLMLDKNIRQNL FSTGC+RLLF AG+NDKAFQ
Sbjct: 541 RPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQ 600

Query: 601 IVRMLYGNGYSVKMEELILFLCHCKKYIEASKMLLFSLESHQAVDIDVCSAVIFHLCQIN 660
           +V +LYG GYSVKMEELI +LCHC+K I+ SK+LLFSLESHQ VD+D+C+ VIF LC+IN
Sbjct: 601 LVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEIN 660

Query: 661 KLSEAFGLYYKLVEMGVHQQLSCLNQLKASLEAGGKFEEVEFVSKRMEP 710
           KLSEAF LYYKLVEMGVHQQLSC NQLK SLEAG K EE EFVSKRMEP
Sbjct: 661 KLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMEP 709

BLAST of CmoCh06G009910 vs. NCBI nr
Match: gi|1009140507|ref|XP_015887690.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g02060, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 964.9 bits (2493), Expect = 7.7e-278
Identity = 475/690 (68.84%), Postives = 575/690 (83.33%), Query Frame = 1

Query: 29  LRCYSSR-----------LTEAETKSSNRTKKARDMARMINSKPWSNDLESSLASFSPSL 88
           LRCYSS+           +   E KSS +TK+A+ MAR+INSKPWSNDLESSL++ SPSL
Sbjct: 85  LRCYSSQHGNNFCFNEELVDNVEPKSSTKTKRAKAMARLINSKPWSNDLESSLSTLSPSL 144

Query: 89  SKTTVLQTLGFLRDPSKALKFFNWAQEMGHAHTDQSYFSILEILGRNRHLNAARNFLFSI 148
           SKTTVLQTL  +  P+KAL+FF W QEMG +H DQSYF +LEILGR R+LNAARN LFS+
Sbjct: 145 SKTTVLQTLHLISAPAKALRFFKWVQEMGFSHNDQSYFLMLEILGRTRNLNAARNLLFSL 204

Query: 149 EKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGVSPSIVTFNSLLTILLKR 208
           EK+S G VKLE RFFNSL+RN+ RAGLFQES+ +F TMKS GVSPS++TFNSLL+ILLKR
Sbjct: 205 EKKSEGVVKLEDRFFNSLIRNYGRAGLFQESLKVFATMKSLGVSPSVITFNSLLSILLKR 264

Query: 209 GRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPDVIT 268
           GRTNMA+N+YDEMLSTYGVTPDT+TFNILIRGFCMN MVDEGFR F+++SRF CEPDVIT
Sbjct: 265 GRTNMARNLYDEMLSTYGVTPDTYTFNILIRGFCMNSMVDEGFRFFQEISRFKCEPDVIT 324

Query: 269 YNTLVDGLCRGGKVTIAYNVVKAMGKKSVDLNPNVVTYTTLIRGYCAKREINNALAVFEE 328
           YNT+VDGLCR GKV IA NV+K M  KS DLNPNVVTYTTLIRG+C K+EI++AL+V EE
Sbjct: 325 YNTIVDGLCRAGKVDIARNVMKGMSNKSRDLNPNVVTYTTLIRGFCMKQEIDDALSVLEE 384

Query: 329 MVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFSPDTCTFNTLMHCHCDAG 388
           M++ GLK N ITYNTLIKGLCEA++F+K+KEILE T   G F+PDTCTFNTLMH HC++G
Sbjct: 385 MISRGLKPNRITYNTLIKGLCEAQRFDKIKEILEGTVTHGGFTPDTCTFNTLMHAHCNSG 444

Query: 389 NLDEALRVFERMTKLKIRPDSATYSVLIRSLCEGKYYEKAENLLDKLLEKRILLSDDGCK 448
           NLDEAL+VF +M++L+++PDSATYSVLIRSLC+   Y++AE L D+L EK ILL+D GC+
Sbjct: 445 NLDEALKVFAKMSELQVQPDSATYSVLIRSLCQQGDYDRAEKLSDELAEKEILLNDAGCR 504

Query: 449 PLVAAYNPIFKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTLIMGHCNEGTFESGYELL 508
           PLVAAYNP+F+YLC NGK +KAE +FRQLM+RGTQDPPS+KT+IMGHC EGTFE+GYELL
Sbjct: 505 PLVAAYNPMFEYLCRNGKTRKAEGIFRQLMKRGTQDPPSFKTMIMGHCKEGTFEAGYELL 564

Query: 509 VLMLRKDFLPDMEVYEALINGFLHKDKPLLALQTLEKMLRSSHLPESSTFHSILEKLLEQ 568
           VLMLR+DF+PD E+YE+LI+G L K KPLLA QTLEKML+SSHLP +S FHSIL  LLE+
Sbjct: 565 VLMLRRDFVPDAEIYESLIDGLLQKGKPLLAQQTLEKMLKSSHLPRTSIFHSILAALLEK 624

Query: 569 GNASESASLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQIVRMLYGNGYSVKMEEL 628
           G A ESA  + LML++ IRQN+ FST   +LLF +G+ D+AF+++ MLY NGYSVK+EEL
Sbjct: 625 GFAPESAGFVTLMLERKIRQNIDFSTHVTKLLFGSGLRDRAFELLGMLYENGYSVKIEEL 684

Query: 629 ILFLCHCKKYIEASKMLLFSLESHQAVDIDVCSAVIFHLCQINKLSEAFGLYYKLVEMGV 688
           + FLC  +K  EA K+L FSL+  Q VD+D+ + VI  L +I KLSEAFGLYY+LVE GV
Sbjct: 685 VSFLCQKRKLSEACKLLQFSLQKQQDVDVDLFNTVIIGLTEIKKLSEAFGLYYELVEKGV 744

Query: 689 HQQLSCLNQLKASLEAGGKFEEVEFVSKRM 708
           HQQL+CL+ LK +LE  G+ +EVEFVSKRM
Sbjct: 745 HQQLACLDDLKTALEVAGRSDEVEFVSKRM 774

BLAST of CmoCh06G009910 vs. NCBI nr
Match: gi|645253037|ref|XP_008232397.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g02060, chloroplastic [Prunus mume])

HSP 1 Score: 934.5 bits (2414), Expect = 1.1e-268
Identity = 472/696 (67.82%), Postives = 560/696 (80.46%), Query Frame = 1

Query: 28  FLRCYSSRLTEAETK-------------SSNRTKKARDMARMINSKPWSNDLESSLASFS 87
           FLRCYSS+ TE   +             S+ +TK A+DMAR++N+ PWS++LESSL++ S
Sbjct: 33  FLRCYSSQKTENHNENDEQQHRAKQPKSSTPKTKTAKDMARLVNTNPWSSELESSLSTIS 92

Query: 88  PSLSKTTVLQTLGFLRDPSKALKFFNWAQEMGHAHTDQSYFSILEILGRNRHLNAARNFL 147
            SLSKTTV Q L  ++ P KAL+FF W + MG +H DQSYF +LEILGR R+LNAARN L
Sbjct: 93  SSLSKTTVHQALHLIKTPHKALQFFKWVEVMGFSHNDQSYFLMLEILGRARNLNAARNLL 152

Query: 148 FSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGVSPSIVTFNSLLTIL 207
           FSIEK+S GAVKLE RFFNSL+RN+ RAGLFQESI LFTTMKS GVSPS+V+FNSLL+IL
Sbjct: 153 FSIEKKSNGAVKLEDRFFNSLIRNYGRAGLFQESIKLFTTMKSLGVSPSVVSFNSLLSIL 212

Query: 208 LKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRFGCEPD 267
           LK+GRTNMAKNVYDEMLS YGVTPDT+TFNILIRGFCMN MVDEG+R FKD+S F C+PD
Sbjct: 213 LKKGRTNMAKNVYDEMLSMYGVTPDTYTFNILIRGFCMNSMVDEGYRFFKDMSGFRCDPD 272

Query: 268 VITYNTLVDGLCRGGKVTIAYNVVKAMGKKSVDLNPNVVTYTTLIRGYCAKREINNALAV 327
           VITYNTLVDGLCR GKV IA+NVVK M K+S DL PNVVTYTTLIRGYC K+EI+ AL +
Sbjct: 273 VITYNTLVDGLCRAGKVEIAHNVVKGMSKRSGDLTPNVVTYTTLIRGYCVKQEIDKALCI 332

Query: 328 FEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFSPDTCTFNTLMHCHC 387
            EE+   GLK N  TYNTLIKGLCEA+K +K+KEILE T + G F PDTCTFNTLMH HC
Sbjct: 333 LEEITTRGLKPNGFTYNTLIKGLCEAQKLDKIKEILEGTMIGGEFIPDTCTFNTLMHSHC 392

Query: 388 DAGNLDEALRVFERMTKLKIRPDSATYSVLIRSLCEGKYYEKAENLLDKLLEKRILLSDD 447
           +AGNLDEAL+VF +M++LK+ PDSATYSVLIRSLC+   Y +AE L D+L +K ILL DD
Sbjct: 393 NAGNLDEALKVFAKMSELKVPPDSATYSVLIRSLCQRGDYPRAEELFDELSKKEILLRDD 452

Query: 448 GCKPLVAAYNPIFKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTLIMGHCNEGTFESGY 507
           GCKPLVA+YNPIF YL  NGK +KAE VFRQLMRRGTQDP SYKTLIMG+C EGT+E+GY
Sbjct: 453 GCKPLVASYNPIFGYLSSNGKTQKAEEVFRQLMRRGTQDPLSYKTLIMGNCKEGTYEAGY 512

Query: 508 ELLVLMLRKDFLPDMEVYEALINGFLHKDKPLLALQTLEKMLRSSHLPESSTFHSILEKL 567
           ELLV MLR+DF+PD E+Y +LI+G L K KPLLA QTLEKML+SSHLP++STFHS+L +L
Sbjct: 513 ELLVWMLRRDFVPDEEIYVSLIDGLLQKGKPLLAQQTLEKMLKSSHLPQTSTFHSLLAEL 572

Query: 568 LEQGNASESASLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQIVRMLYGNGYSVKM 627
           L+Q  A ESAS + LML+K IRQN+  ST  +RLLF  G+ DKAF+IV MLY NGYS+KM
Sbjct: 573 LKQHCARESASFVTLMLEKKIRQNINLSTHLVRLLFSRGLRDKAFEIVAMLYENGYSIKM 632

Query: 628 EELILFLCHCKKYIEASKMLLFSLESHQAVDIDVCSAVIFHLCQINKLSEAFGLYYKLVE 687
           EEL+ FLC  +K +EA +ML FSL+ HQ+V ID  + VI  LC INKLSEAFGLYY+LVE
Sbjct: 633 EELVCFLCQSRKLLEACEMLQFSLQKHQSVVIDNFNQVIVGLCDINKLSEAFGLYYELVE 692

Query: 688 MGVHQQLSCLNQLKASLEAGGKFEEVEFVSKRMEPQ 711
              +QQL CL+ LK++LE  G+  E EF+SKR+  Q
Sbjct: 693 NKGYQQLPCLDSLKSALEVAGRSVEAEFLSKRIPRQ 728

BLAST of CmoCh06G009910 vs. NCBI nr
Match: gi|596024803|ref|XP_007219156.1| (hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica])

HSP 1 Score: 925.6 bits (2391), Expect = 5.2e-266
Identity = 474/701 (67.62%), Postives = 563/701 (80.31%), Query Frame = 1

Query: 14  VFRRQSSNMHRRLPFLRCYS---SRLTEAETKSSN-RTKKARDMARMINSKPWSNDLESS 73
           VFR+Q  +     P L+  S   S L   + KSS  +TK A+DMAR++N+  WS++LESS
Sbjct: 14  VFRKQLFS-----PSLKSNSQPDSFLRAKQPKSSTPKTKTAKDMARLVNTNTWSSELESS 73

Query: 74  LASFSPSLSKTTVLQTLGFLRDPSKALKFFNWAQEMGHAHTDQSYFSILEILGRNRHLNA 133
           L++ S SLSKTTV QTL  ++ P KAL+FF W + MG +H DQSYF +LEILGR R+LNA
Sbjct: 74  LSTISSSLSKTTVHQTLHLIKTPHKALQFFKWVEVMGFSHNDQSYFLMLEILGRARNLNA 133

Query: 134 ARNFLFSIEKRSRGAVKLEARFFNSLMRNFSRAGLFQESINLFTTMKSHGVSPSIVTFNS 193
           ARN LFSIEKRS GAVKLE RFFNSL+RN+ RAGLFQESI LFTTMKS GVSPS+V+FNS
Sbjct: 134 ARNLLFSIEKRSNGAVKLEDRFFNSLIRNYGRAGLFQESIKLFTTMKSLGVSPSVVSFNS 193

Query: 194 LLTILLKRGRTNMAKNVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDEGFRIFKDLSRF 253
           LL+ILLK+GRTNMAKNVYDEMLS YGVTPDT+TFNILIRGFCMN MVDEG+R FKD+S F
Sbjct: 194 LLSILLKKGRTNMAKNVYDEMLSMYGVTPDTYTFNILIRGFCMNSMVDEGYRFFKDMSGF 253

Query: 254 GCEPDVITYNTLVDGLCRGGKVTIAYNVVKAMGKKSVDLNPNVVTYTTLIRGYCAKREIN 313
            C+PDVITYNTLVDGLCR GKV IA+NVV  M K+S DL PNVVTYTTLIRGYC K+EI+
Sbjct: 254 RCDPDVITYNTLVDGLCRAGKVEIAHNVVNGMSKRSGDLTPNVVTYTTLIRGYCVKQEID 313

Query: 314 NALAVFEEMVNLGLKANNITYNTLIKGLCEAEKFEKVKEILEATAVDGTFSPDTCTFNTL 373
            AL++ EEM   GLK N  TYNTLIKGLCEA+K +K+KEI E T + G F+PDTCTFNTL
Sbjct: 314 KALSILEEMTTRGLKPNGFTYNTLIKGLCEAQKLDKIKEIFEGTMIGGEFTPDTCTFNTL 373

Query: 374 MHCHCDAGNLDEALRVFERMTKLKIRPDSATYSVLIRSLCEGKYYEKAENLLDKLLEKRI 433
           MH HC+AGNLDEAL+VF +M++LK+ PDSATYSVLI SLC+   Y +AE L D+L +K I
Sbjct: 374 MHSHCNAGNLDEALKVFAKMSELKVPPDSATYSVLICSLCQRGDYPRAEELFDELSKKEI 433

Query: 434 LLSDDGCKPLVAAYNPIFKYLCENGKAKKAETVFRQLMRRGTQDPPSYKTLIMGHCNEGT 493
           LL DDGCKPLVA+YNPIF YL  NGK +KAE VFRQLMRRGTQDP SYKTLIMG+C EGT
Sbjct: 434 LLRDDGCKPLVASYNPIFGYLSSNGKTQKAEEVFRQLMRRGTQDPLSYKTLIMGNCKEGT 493

Query: 494 FESGYELLVLMLRKDFLPDMEVYEALINGFLHKDKPLLALQTLEKMLRSSHLPESSTFHS 553
           +E+GYELLV MLR+DF+PD E+Y +LI+G L K KPLLA QTLEKML+SSHLP++STFHS
Sbjct: 494 YEAGYELLVWMLRRDFVPDEEIYVSLIDGLLQKGKPLLAQQTLEKMLKSSHLPQTSTFHS 553

Query: 554 ILEKLLEQGNASESASLIQLMLDKNIRQNLGFSTGCIRLLFEAGINDKAFQIVRMLYGNG 613
           +L +LL+Q  A ESAS + LML+K IRQN+  ST  +RLLF  G+ DKAF+IV MLY NG
Sbjct: 554 LLAELLKQHCAHESASFVTLMLEKKIRQNINLSTHLVRLLFSHGLRDKAFEIVGMLYENG 613

Query: 614 YSVKMEELILFLCHCKKYIEASKMLLFSLESHQAVDIDVCSAVIFHLCQINKLSEAFGLY 673
           YS+KMEEL+ FLC  +K +EA +ML FSL+ HQ+VDID  + VI  LC INKLSEAFGLY
Sbjct: 614 YSIKMEELVCFLCQSRKLLEACEMLQFSLQKHQSVDIDNFNQVIVGLCDINKLSEAFGLY 673

Query: 674 YKLVEMGVHQQLSCLNQLKASLEAGGKFEEVEFVSKRMEPQ 711
           Y+LVE   +QQL CL+ LK++LE  G+  E EF+SKR+  Q
Sbjct: 674 YELVENKGYQQLPCLDSLKSALEVAGRSVEAEFLSKRIPRQ 709

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PPR2_ARATH3.5e-23058.33Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidop... [more]
PP190_ARATH1.1e-9832.04Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana GN... [more]
PP407_ARATH1.4e-5826.63Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PP445_ARATH4.3e-5528.08Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN... [more]
PPR38_ARATH1.0e-5128.41Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
Match NameE-valueIdentityDescription
A0A0A0KYI2_CUCSA0.0e+0083.92Uncharacterized protein OS=Cucumis sativus GN=Csa_4G358710 PE=4 SV=1[more]
M5XMS8_PRUPE3.6e-26667.62Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016282mg PE=4 S... [more]
B9RD38_RICCO5.9e-26164.02Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
A0A061DVE7_THECC3.0e-26065.51Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma c... [more]
W9RM83_9ROSA9.5e-25965.09Uncharacterized protein OS=Morus notabilis GN=L484_024133 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G02060.12.0e-23158.33 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G37230.16.2e-10032.04 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G39710.18.1e-6026.63 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G65560.12.4e-5628.08 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G12700.19.6e-5329.74 ATP binding;nucleic acid binding;helicases[more]
Match NameE-valueIdentityDescription
gi|659086986|ref|XP_008444214.1|0.0e+0084.49PREDICTED: pentatricopeptide repeat-containing protein At1g02060, chloroplastic ... [more]
gi|449449910|ref|XP_004142707.1|0.0e+0083.92PREDICTED: pentatricopeptide repeat-containing protein At1g02060, chloroplastic ... [more]
gi|1009140507|ref|XP_015887690.1|7.7e-27868.84PREDICTED: pentatricopeptide repeat-containing protein At1g02060, chloroplastic ... [more]
gi|645253037|ref|XP_008232397.1|1.1e-26867.82PREDICTED: pentatricopeptide repeat-containing protein At1g02060, chloroplastic ... [more]
gi|596024803|ref|XP_007219156.1|5.2e-26667.62hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006338 chromatin remodeling
biological_process GO:0032508 DNA duplex unwinding
biological_process GO:0006281 DNA repair
biological_process GO:0008150 biological_process
cellular_component GO:0005657 replication fork
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004003 ATP-dependent DNA helicase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016746 transferase activity, transferring acyl groups

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G009910.1CmoCh06G009910.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 442..470
score: 0.18coord: 511..538
score: 0.6coord: 649..677
score: 0.55coord: 476..504
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 152..191
score: 3.2E-7coord: 361..409
score: 2.2E-17coord: 218..267
score: 2.0E-17coord: 290..338
score: 2.0
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 152..183
score: 6.6E-5coord: 400..430
score: 1.1E-4coord: 221..255
score: 2.1E-10coord: 328..351
score: 1.2E-4coord: 185..220
score: 1.3E-5coord: 364..398
score: 2.7E-10coord: 256..286
score: 2.6E-4coord: 442..470
score: 2.2E-4coord: 476..508
score: 0.0026coord: 293..326
score: 8.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 362..396
score: 13.285coord: 397..431
score: 10.019coord: 183..218
score: 9.12coord: 110..144
score: 5.097coord: 473..507
score: 9.898coord: 543..577
score: 7.333coord: 508..542
score: 8.846coord: 219..253
score: 13.362coord: 148..182
score: 10.676coord: 291..325
score: 12.244coord: 439..469
score: 7.629coord: 645..679
score: 7.837coord: 75..109
score: 5.042coord: 326..361
score: 9.219coord: 254..288
score: 10
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 158..205
score: 1.1E-11coord: 281..500
score: 1.1
NoneNo IPR availableunknownCoilCoilcoord: 414..434
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 12..548
score: 9.6E-220coord: 651..708
score: 9.6E
NoneNo IPR availablePANTHERPTHR24015:SF863SUBFAMILY NOT NAMEDcoord: 651..708
score: 9.6E-220coord: 12..548
score: 9.6E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 296..497
score: 3.1

The following gene(s) are paralogous to this gene:

None