CmoCh06G009610 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTCCGATTCAGAGTCAATGGAAACCCCTCTACTTAATTCCTTCCTCCTCCCCCATTTCTCTTCGCTCCCCTGCTCCCTTCTTCTTCTTCTTCTTCCCATAAACATACGCCACGAATCTTGTAGTGGTCGCAAACTAGATGGCCGATTGCATCGTGCTTCCTTCTGGGTATTTATTGCCGGTCGGATTCCGCTTCCATCCGACGGATGAGGAGCTAATTAATCACTACCTGAAGAACAAGATGCTTGGAAGGGAATCCCTCGTTGATTACATCCGTCAAGTTGATATCTGCAAGTATGAGCCATGGGATCTTCCTTGTACGTTTAATGTTTATCCCTCTTTTTCGCGATCACATTTTTTTCATTTCATGCCTTCGCATTTGCATTTGTCCGGCTCTACTTTCTCTAACGTTCTGTATCTCTTCGTAGGCCTTTCAAACGACCATACAAGTGAGCAGGAATGGTTTTTCTTTGCTGCCCAAGATTTGAAGTATTCCAATAGCCGTCGATCCAATAGGGCCACGAAAACCGGCTACTGGAAATCCACGGGCAAGGACCGCAAAATCTTGGATCCGCGAACCAAGAAGTTGATTGGTACCAAAAAAACTCTGGTCTTCTACCGTGGCCGGGTTTCAAATGGAATCAGGACCAATTGGGTCATACACGAGTATCAACTTCATTCCGATCCCCAGTTTGCGCATCTGGTGATTTCCCTCATTCTTTGTCCCCTATACATTTTTTCTTTGCGTCTCTCTACTCTAATTTCCTTTCTTTTGTGCTTCTGCTTATGTCCTCTCATGCTGTCTCTCATGTGATTTTGAACTTTGAATCTTGATATGTACTAAGCTTGACATTGATTAGAAAATATGCGGCAAATATCCTCGAATTTAACCGTTTGTGTTGAGGATGGTTGGGAGAGGAGTCTCTCATCGACTAATTAAGGGGTTGATCATTGGTTTATAAGTAAGGAATACATCTTCATTGGTATGAGACCTTTTGGGAAAACCAAAAGCAAAGACACGAGAGCTTATGCTCAAAGTGGACATTATCGTACCATTGTGGAGGTCCGTGGTTCCTAACATGGTATTAGAGTCATGCCCTTAACTTAACTCAAGTGTCGAACAAATGATGTAATTTGTTCGAGGGCTCCAAAGGAGTAGAGTCTCAATCAAGAAGAGGCTGTTCGAGGGCTCCATAGGCCTTGGGGGAGGCTCTATAGTGTACTTTGTTTGTGGGGAGGATTGTTGGGAAAAGAGTCCCACATCGGCTAATTAAGAGGTTGATCATGGGTTTATAAGTAAGGAATACATACCAGATTGGTACGAGGCCTTTTGGGGAAACCAAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTTGACAATATCATAGCATTGTGAAGGATCGTGATTTCTAACCGTCTGCATTAGAGTGTATGGTGGTCTAGTTTGTTGATGATGCTTAGTTTAACTCTCCCTCTTGTCCTCTTGTTCATGCAGAGGCCGTTTGTTATTTGTCTCCTAAAGAAAAAGCTGGATGAGAATGATGTTTTGGTATGTGATGAAGCTGAACAAAATGGTCCTATGAATTTGACGTTCGATAATGAAGTCTCAGTGAACCAAAATAAAGAGGTTTGAATTTAGAAAGATCAATCCCTGGACGTTGCCTAGTGCCTACTGCAGCATGATTTGTTTTAATAATCTTAGCATTTATATGTTCAGATTCCAGGAATTTGACAATCATTGTTTCCACCGAATCTCCAGGTTTTGGGTTACGATTTCTCCGAATTGGAGTCCCTTTTGTTTTCTGACCGGGAACCCATCTCAATGGATTTCCAAGCTAACAACAGCCACGTGACTCAGGTCAATGAACCTAATGATGAGGCCATTGATATTGAGGAGATTTATTTCCATGAAGGGACACCAAATAGTTCAATCAGTGATTTCAACTGGAAGGAATATCTCGAAATGGTTGAAGAAGACCAGGGTGGTGCACTCAACGGTGACACTGGCATGTATGCAATTTTAAATATGCAGGTAAAAGTATGTCATAAATCTTTTAAGTGTACACAAATATCTTGGTGGAAATCCTTAACTGAAGAAATTGATTCGAGCTTTCTTAAACCATGCTTTTTCACTGTGATTCCATTTCTGATTTATGTTGGGTTAGAAACTGTGAGATCCTACCTCGGTTGATTGAGGAGGAGAATAAAATATTGTTTATAAGAGTGTAGAAACCTTTTCGTAGCAGACGCATTTTAAAAATATTGAGGGTATACCCAAAAGGAAGAGTTCAAAGAGGACAATATTTACTAGGGGTGGACTTGATTTAGGCTTCTCGTAGATCTTATTATTATAATAGAGCTAAATAGTCTGTATTTCATTGTGCATTGCAGGGTCGTTCTACTTCTCACAGTATGTTCGATGAACATAGTTCAAGGGTACCAACTCAAACTACGCCGATCCTTAAAGAATCGCGTAGAAGCCCACTTACTTCAAAGATTTTCAAGTATGGAGGGGAAGAAGATCTGTCCTCTGTCCGGCCTCGTGGAGATGAACTTCAAACCAATGGCATTTCATACCTCAGTGATGACCCTGATAGGGAAACAATAACTTTAAGATTTCAAGGCCAACCCAGATCCGATAAGGTTGTAAACCATGCACAGGATTCACAAAATATCCAATGGAAGAGGAAAACTCAACTCCAAGTAGTATCATCCCCCGACAAGGTGAGAGAATAGAACAAAAATACTCACAAATGTTCTTCTCATGAAACCAATTTGAATGACTTCAATTTGGCATGTCTTACATGAAGCGTCGTTTAATTTGCAGGCAAAAGCAGTCTCAAAGTGGAAGAAAGTTAATGGAGCAGCTGCAACTTCAAATAAAGACATTGTTGTAGACCGAGAAAGTGAAGTTAAGAGTCTTGTAGCCCACCAGTCCAGTTCAACTGGACGTGGGTCTGTTGAGAGCCGAGGAAAGCGTTGTTCTAGTATCCTGACTACAAAATGCATTCACCACAGATCAAGCCCCGCATCCGCCTATGTTGCCAGAGTATGTATAGGCCTTATTTTGTTCTTCGTAGTTGCAAGAGATATGCTGCTGGATGGAAATTGGTGATAAAATTTAGTACCCATATGGATATGATGCAGGTAATTATGATACTCATAATAGCAAGTTACTATGTATTACTGTAATTAAGGAAGGTGTTTAACTAAGTTGATAATAAGTTATTTGTTCTCGCGTGTTAGCTGTGGAAGCAAGTTAATAAGCTAAGCCGGTTGTGTTAAAAGCTATCTTTTTTCTGTATGGGGGTAATGATTAATAATAAGATTCTATTCTCTCTTACTGGAA ACTCCGATTCAGAGTCAATGGAAACCCCTCTACTTAATTCCTTCCTCCTCCCCCATTTCTCTTCGCTCCCCTGCTCCCTTCTTCTTCTTCTTCTTCCCATAAACATACGCCACGAATCTTGTAGTGGTCGCAAACTAGATGGCCGATTGCATCGTGCTTCCTTCTGGGTATTTATTGCCGGTCGGATTCCGCTTCCATCCGACGGATGAGGAGCTAATTAATCACTACCTGAAGAACAAGATGCTTGGAAGGGAATCCCTCGTTGATTACATCCGTCAAGTTGATATCTGCAAGTATGAGCCATGGGATCTTCCTTGCCTTTCAAACGACCATACAAGTGAGCAGGAATGGTTTTTCTTTGCTGCCCAAGATTTGAAGTATTCCAATAGCCGTCGATCCAATAGGGCCACGAAAACCGGCTACTGGAAATCCACGGGCAAGGACCGCAAAATCTTGGATCCGCGAACCAAGAAGTTGATTGGTACCAAAAAAACTCTGGTCTTCTACCGTGGCCGGGTTTCAAATGGAATCAGGACCAATTGGGTCATACACGAGTATCAACTTCATTCCGATCCCCAGTTTGCGCATCTGAGGCCGTTTGTTATTTGTCTCCTAAAGAAAAAGCTGGATGAGAATGATGTTTTGGTATGTGATGAAGCTGAACAAAATGGTCCTATGAATTTGACGTTCGATAATGAAGTCTCAGTGAACCAAAATAAAGAGGTTTTGGGTTACGATTTCTCCGAATTGGAGTCCCTTTTGTTTTCTGACCGGGAACCCATCTCAATGGATTTCCAAGCTAACAACAGCCACGTGACTCAGGTCAATGAACCTAATGATGAGGCCATTGATATTGAGGAGATTTATTTCCATGAAGGGACACCAAATAGTTCAATCAGTGATTTCAACTGGAAGGAATATCTCGAAATGGTTGAAGAAGACCAGGGTGGTGCACTCAACGGTGACACTGGCATGTATGCAATTTTAAATATGCAGCTTTCTTAAACCATGCTTTTTCACTGTGATTCCATTTCTGATTTATGTTGGGTTAGAAACTGTGAGATCCTACCTCGGTTGATTGAGGAGGAGAATAAAATATTGTTTATAAGAGTGTAGAAACCTTTTCGTAGCAGACGCATTTTAAAAATATTGAGGGTATACCCAAAAGGAAGAGTTCAAAGAGGACAATATTTACTAGGGGTGGACTTGATTTAGGCTTCTCGTAGATCTTATTATTATAATAGAGCTAAATAGTCTGTATTTCATTGTGCATTGCAGGGTCGTTCTACTTCTCACAGTATGTTCGATGAACATAGTTCAAGGGTACCAACTCAAACTACGCCGATCCTTAAAGAATCGCGTAGAAGCCCACTTACTTCAAAGATTTTCAAGTATGGAGGGGAAGAAGATCTGTCCTCTGTCCGGCCTCGTGGAGATGAACTTCAAACCAATGGCATTTCATACCTCAGTGATGACCCTGATAGGGAAACAATAACTTTAAGATTTCAAGGCCAACCCAGATCCGATAAGGTTGTAAACCATGCACAGGATTCACAAAATATCCAATGGAAGAGGAAAACTCAACTCCAAGTAGTATCATCCCCCGACAAGGCAAAAGCAGTCTCAAAGTGGAAGAAAGTTAATGGAGCAGCTGCAACTTCAAATAAAGACATTGTTGTAGACCGAGAAAGTGAAGTTAAGAGTCTTGTAGCCCACCAGTCCAGTTCAACTGGACGTGGGTCTGTTGAGAGCCGAGGAAAGCGTTGTTCTAGTATCCTGACTACAAAATGCATTCACCACAGATCAAGCCCCGCATCCGCCTATGTTGCCAGAGTATGTATAGGCCTTATTTTGTTCTTCGTAGTTGCAAGAGATATGCTGCTGGATGGAAATTGGTGATAAAATTTAGTACCCATATGGATATGATGCAGGTAATTATGATACTCATAATAGCAAGTTACTATGTATTACTGTAATTAAGGAAGGTGTTTAACTAAGTTGATAATAAGTTATTTGTTCTCGCGTGTTAGCTGTGGAAGCAAGTTAATAAGCTAAGCCGGTTGTGTTAAAAGCTATCTTTTTTCTGTATGGGGGTAATGATTAATAATAAGATTCTATTCTCTCTTACTGGAA ATGGCCGATTGCATCGTGCTTCCTTCTGGGTATTTATTGCCGGTCGGATTCCGCTTCCATCCGACGGATGAGGAGCTAATTAATCACTACCTGAAGAACAAGATGCTTGGAAGGGAATCCCTCGTTGATTACATCCGTCAAGTTGATATCTGCAAGTATGAGCCATGGGATCTTCCTTGCCTTTCAAACGACCATACAAGTGAGCAGGAATGGTTTTTCTTTGCTGCCCAAGATTTGAAGTATTCCAATAGCCGTCGATCCAATAGGGCCACGAAAACCGGCTACTGGAAATCCACGGGCAAGGACCGCAAAATCTTGGATCCGCGAACCAAGAAGTTGATTGGTACCAAAAAAACTCTGGTCTTCTACCGTGGCCGGGTTTCAAATGGAATCAGGACCAATTGGGTCATACACGAGTATCAACTTCATTCCGATCCCCAGTTTGCGCATCTGAGGCCGTTTGTTATTTGTCTCCTAAAGAAAAAGCTGGATGAGAATGATGTTTTGGTATGTGATGAAGCTGAACAAAATGGTCCTATGAATTTGACGTTCGATAATGAAGTCTCAGTGAACCAAAATAAAGAGGTTTTGGGTTACGATTTCTCCGAATTGGAGTCCCTTTTGTTTTCTGACCGGGAACCCATCTCAATGGATTTCCAAGCTAACAACAGCCACGTGACTCAGGTCAATGAACCTAATGATGAGGCCATTGATATTGAGGAGATTTATTTCCATGAAGGGACACCAAATAGTTCAATCAGTGATTTCAACTGGAAGGAATATCTCGAAATGGTTGAAGAAGACCAGGGTGGTGCACTCAACGGTGACACTGGCATGTATGCAATTTTAAATATGCAGCTTTCTTAA
BLAST of CmoCh06G009610 vs. Swiss-Prot
Match: NTL9_ARATH (Protein NTM1-like 9 OS=Arabidopsis thaliana GN=NTL9 PE=1 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 4.0e-44 Identity = 88/156 (56.41%), Postives = 106/156 (67.95%), Query Frame = 1
BLAST of CmoCh06G009610 vs. Swiss-Prot
Match: NAC14_ARATH (NAC domain-containing protein 14 OS=Arabidopsis thaliana GN=NAC014 PE=2 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 5.3e-44 Identity = 91/168 (54.17%), Postives = 111/168 (66.07%), Query Frame = 1
BLAST of CmoCh06G009610 vs. Swiss-Prot
Match: NAC91_ARATH (NAC domain-containing protein 91 OS=Arabidopsis thaliana GN=NAC091 PE=1 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 5.5e-41 Identity = 83/155 (53.55%), Postives = 104/155 (67.10%), Query Frame = 1
BLAST of CmoCh06G009610 vs. Swiss-Prot
Match: NAC62_ARATH (NAC domain-containing protein 62 OS=Arabidopsis thaliana GN=NAC062 PE=1 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 9.3e-41 Identity = 98/217 (45.16%), Postives = 127/217 (58.53%), Query Frame = 1
BLAST of CmoCh06G009610 vs. Swiss-Prot
Match: NAC86_ARATH (NAC domain-containing protein 86 OS=Arabidopsis thaliana GN=NAC086 PE=2 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.7e-40 Identity = 82/155 (52.90%), Postives = 106/155 (68.39%), Query Frame = 1
BLAST of CmoCh06G009610 vs. TrEMBL
Match: A0A0A0LWI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G572390 PE=4 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 5.8e-98 Identity = 183/302 (60.60%), Postives = 222/302 (73.51%), Query Frame = 1
BLAST of CmoCh06G009610 vs. TrEMBL
Match: F6I305_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02270 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 6.5e-49 Identity = 115/253 (45.45%), Postives = 151/253 (59.68%), Query Frame = 1
BLAST of CmoCh06G009610 vs. TrEMBL
Match: G7ZZI3_MEDTR (NAC domain protein OS=Medicago truncatula GN=MTR_8g023840 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.2e-47 Identity = 113/268 (42.16%), Postives = 159/268 (59.33%), Query Frame = 1
BLAST of CmoCh06G009610 vs. TrEMBL
Match: A5AXN6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005910 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 2.7e-47 Identity = 98/165 (59.39%), Postives = 120/165 (72.73%), Query Frame = 1
BLAST of CmoCh06G009610 vs. TrEMBL
Match: F6I303_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02290 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 2.7e-47 Identity = 101/172 (58.72%), Postives = 123/172 (71.51%), Query Frame = 1
BLAST of CmoCh06G009610 vs. TAIR10
Match: AT4G35580.2 (AT4G35580.2 NAC transcription factor-like 9) HSP 1 Score: 179.9 bits (455), Expect = 2.3e-45 Identity = 88/156 (56.41%), Postives = 106/156 (67.95%), Query Frame = 1
BLAST of CmoCh06G009610 vs. TAIR10
Match: AT1G33060.2 (AT1G33060.2 NAC 014) HSP 1 Score: 179.5 bits (454), Expect = 3.0e-45 Identity = 91/168 (54.17%), Postives = 111/168 (66.07%), Query Frame = 1
BLAST of CmoCh06G009610 vs. TAIR10
Match: AT5G24590.2 (AT5G24590.2 TCV-interacting protein) HSP 1 Score: 169.5 bits (428), Expect = 3.1e-42 Identity = 83/155 (53.55%), Postives = 104/155 (67.10%), Query Frame = 1
BLAST of CmoCh06G009610 vs. TAIR10
Match: AT3G49530.1 (AT3G49530.1 NAC domain containing protein 62) HSP 1 Score: 168.7 bits (426), Expect = 5.3e-42 Identity = 98/217 (45.16%), Postives = 127/217 (58.53%), Query Frame = 1
BLAST of CmoCh06G009610 vs. TAIR10
Match: AT5G17260.1 (AT5G17260.1 NAC domain containing protein 86) HSP 1 Score: 167.2 bits (422), Expect = 1.5e-41 Identity = 82/155 (52.90%), Postives = 106/155 (68.39%), Query Frame = 1
BLAST of CmoCh06G009610 vs. NCBI nr
Match: gi|659099647|ref|XP_008450706.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis melo]) HSP 1 Score: 367.1 bits (941), Expect = 2.9e-98 Identity = 184/302 (60.93%), Postives = 222/302 (73.51%), Query Frame = 1
BLAST of CmoCh06G009610 vs. NCBI nr
Match: gi|778662593|ref|XP_011659914.1| (PREDICTED: NAC transcription factor 25-like [Cucumis sativus]) HSP 1 Score: 365.5 bits (937), Expect = 8.3e-98 Identity = 183/302 (60.60%), Postives = 222/302 (73.51%), Query Frame = 1
BLAST of CmoCh06G009610 vs. NCBI nr
Match: gi|659099643|ref|XP_008450704.1| (PREDICTED: uncharacterized protein LOC103492204 isoform X1 [Cucumis melo]) HSP 1 Score: 359.0 bits (920), Expect = 7.8e-96 Identity = 184/291 (63.23%), Postives = 213/291 (73.20%), Query Frame = 1
BLAST of CmoCh06G009610 vs. NCBI nr
Match: gi|659099645|ref|XP_008450705.1| (PREDICTED: uncharacterized protein LOC103492204 isoform X2 [Cucumis melo]) HSP 1 Score: 359.0 bits (920), Expect = 7.8e-96 Identity = 184/291 (63.23%), Postives = 213/291 (73.20%), Query Frame = 1
BLAST of CmoCh06G009610 vs. NCBI nr
Match: gi|225453680|ref|XP_002268892.1| (PREDICTED: NAC transcription factor NAM-B1-like isoform X3 [Vitis vinifera]) HSP 1 Score: 203.0 bits (515), Expect = 7.1e-49 Identity = 113/246 (45.93%), Postives = 146/246 (59.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|