CmoCh06G007760 (gene) Cucurbita moschata (Rifu)

NameCmoCh06G007760
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRING/U-box superfamily protein, putative
LocationCmo_Chr06 : 4034722 .. 4042235 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTTCCCAGATTCAGTCACATTCCGCTGCAATCTCCACAGCTACCATGGTCCCGATCAGCTTCTCCAAATTCGAATAAGTCATTCAAGCCGTCTGTTTATCGGATCGCCGTTCCCTGGACATCCTTTCAATATCGTCTATGAAACTCTCACTACTATAACGGTGGATGCTCAGTTCTCCCTTCCTTTGCGGGAGCTCGAAGATCCGTTGTTCTGCCGAGCTTACATCGAAGAATTTCTAAGTTCTTACAACCTTGATGCCACAATCAACAACGCCATTGCTCAGAGGATTGCCTCTTTCGTCATTCAAATGGCGTGCGGAAACTACGAGATGACGTTCTACATCGTTGCGGAAATCGATTACATCCAGATGTTTTGGTTGGACCAGAGTGCGATTGCAGCAGAGGAGGAGGAGGAGGAAGAAGAAGAAGAGGATGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAGGATGAGGAGGAGGAGGAGGAGGTGATTTTTGACAACTTTTCGGAGAGGAGAGGGGTGTCACGGTCATGCTTGTCCAGGGCATGTTGCCCATGGCCGCATGCCCATGACAAGCCAAACCCTTGTCATGTCTTTTCATTCTAGTGTTTTTCCTTTTGTAATTCTAAAGCGTATGACACCTCAAAAATATCATGTCTACGCCTGCCAGAACTAAAATGGCCCAGAATGTACTATAGGGGGATATGACTAGTCGTCAACTTCTCCCTACCCAAGGTTATATATGCTAAGCCGTTGTTATCTTTCTCTTGCTTGCTTATATAACGTCTCTTTCTAAAAATCTCTCTTTCTCAAATCTCTCTCTCGTTTTCTAAAACCTTCTTTTAAAACCGAGGCTAGAGGCTTGACCGTACGTCGCTTGGCCGTAGTCTCGTTTTCTAAAACCTTCTTTTAAAACCGAGGCTAGAGGCTTGACCGTACGTCGCTTGGCCGTAGGCTCGTTTTCTAAAACCTTCTTTTAAAACCGAGGCTAGAGGCTTGACCGTACGTCGCTTGGCCGTAGGCGACGCAAGAACAAATAGGCTTTAAAACCGAGGCTAGAGGCTTGACCGTACGTCGCTTGGCCGTAGGCGACGCAAGAACAAATAGGCTCAACTCACTTGTTGCGAGGCTTGACCGTACGTCGCTTGGCCGTAGGCGACGCAAGAACAAATAGGCTCAACTCACTTGTTGCTGGAAAGTGAGTGCCGCACAATCGCTAGTCCGCTGCCTTCGAAAGTGCGATTGTGTCAAGTGGTATCAGAGCTTTGTTAGCTCCGTAACGTCATATAGACTGAGATCATGTCGACGACAAAGTCGACACCCAAAGCACAAGCCGACCGGCTTACGCTAATAGANACAGGGTTAGGAAGATAGGAAGACCTGTACGGACGATTCGTGAATTCCTTGTCAAATGGAAGAATCTCCCTACAGAGGAAACAAGCTGGGAACGCGCCGAAGATCTGAACTCCGCCACCACCCACATCACAAGGTATGAAAGTAGTCGGTTGACAGGGACGTCAACCAATTAGGTGGGGGTGGATGTCACGGTCATGCTTGTCCAGGGCATGTTGCCCATGGCCGCATGCCCATGACAAGCCAAACCCTTGTCATGTCTTTTCATTCTAGTGTTTTTCCTTTTGTAATTCTAAAGCGTATGACACCTCAAAAATATCATGTCTACGCCTGCCAGAACTAAAATGGCCCAGAATGTACTATAGGGGGATATGACTAGTCGTCAACTTCTCCCTACCCAAGGTTATATATGCTAAGCCGTTGTTATCTTTCTCTTGCTTGCTTATATAACGTCTCTTTCTAAAAATCTCTCTTTCTCAAATCTCTCTCTCCTCGTTTTCTAAAACCTTCTTTTAAAACCGAGGCTAGAGGCTTGACCGTACGTCGCTTGGCCGTAGGCGACGCAAGAACAAATAGGCTCAACTCACTTGTTGCTGGAAAGTGAGTGCCGCACAATCGCTAGTCCGCTGCCTTCGAAAGCGCGATTGTGTCAAGTGGTATCAGAGCTTTGTTAGCTCCGTAACGTCATATAGACTGAGATCATGTCGACGACAAAGTCGACACCCAAAGCACAAGCCGACCGGCTTACGCTAATAGAGGAGGAAATGCTGTTCCTCAAAGAAGTCCCTGACACCCTCCGTTTCCTGGAAACACGGGTGACCGAACTGAGTGAGAAAGTCGTCCAAGTCGACGCAATGGGCAACCGCCTGGATGGGTTGCCAATCGCAGAACTATTGTTTCGAGTGACCTCGCTCGAAGAAAGAGTTGCTCCTACGAGCAGCCCAAAACCGTCTGATAGTCCGGATAGCTCTGTCGCACACAAAGAGGGACGTGGCGAAGAGTTCGACGTACTACAAAACACAATGATGAGTTTGTTCAATGGATTGGCTGATGAATTCAGATCAACAGTCGACGACCTCCAAGAAAGGATGGCCGCCATGAGCACTCGAATTGAAATTACCATGAAAGCCGTGGAAGGTGTCGCGGCTGGACAAACCAATACAGGATCCAACAAACTAAGGTTCCCAGACCCTAGAGCCTTCAAAGGGAATCAGGACGCCAAAGAGTTAGAGAACTTCATCTTTGACGTCGAACAGTACTTCAAAGCCACGACGGCTTGTACCGACGACAAGAAGGTGACTGTAGCCGCGATGTATCTCGTAGACGACGTCAAACTGTGGTGGCGTACGAAGGTGCAAGACATCGAGGATGGATTGTGCACCATCGACTCATGGGAGGACCTCAAGAGAGAGTTGAGGGAACAATTCCTCCCCGAAAATGCAGGGCATATAGCAATGGAGAAAATAGTAGCCCTGAAACACACTGGAAACATACGAGACTACGTCAGACAGTTCTCAACCCTGATGCTGGATATCAGGGGCACAGCAGAGAAGGACAAGGTGTTCTTCTTTATAAATGGTCTACAGCCGTGGGCCAAAACAAAGATACATGAGAACAGGGTCCAAACCCTAGCTGCCGCAATGGCCTGTGCCGAGAGACTCGTAGACTGTGGGAACGAGGCAGGATCCCAAAGAAGAGCGACACCAGCCCCAAACAATGGGGGCAAACCATACAGACCACCAGGCCAGCGAAATGGAAGTCCCAACAGACCGAATGGATGGACGGATAGACCTCCTCAGAACAATCAAGCGGGGACTTCTCGAGGGCATTACCATCAAAAGAACCACCCGACGACACCTTTGCAATGCATGCTGTGTAAAGGCCCCCACAAAGTATCATACTGTCCTCATCGGGCCTCTCTCACTGCACTTCAAGTGTCCATTCAAGAGAGCAATGAAGCAAGGGTCGAGACTTTGCTAGACAAGAAGGAAGATCACGACAACCCCCGAATGGGCGCACTCAAATTCTTGTCAGCCCTCCAACGGAAAGTCGAACCGAAGGAGGTACTAGAAAAAGGGCTCATGTTCGTAGATGCCACAATAAACTCTCAACCGAGCAAGAGCACTCTGATAGACTCTGGAGCAACCCACAACTTCATTGCCGATCAAGAAGCCAAAAGATTGGGACTCACCATAGGAAAAGACCCGAGGAAAATGAAAGCTGTCAATTCCGAGGCCTTGCCTATTGTGGGAGTTTCCAAGAGAGTCCCCTTCAAAATAGGGGATTGGACTGGAGAGCTAGACCTTGTCGTGGTTCGCATGGATGACTTCGACGTGGTACTTGGGATGGAGTTCCTCCTAGAACACAAGGTCATCCCAATGCCATTAGCAAAATGCCTGGTGATCACCGATCGTAATCCCACAGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATCTCGGCCATACAACTGAAAAGGGGACTCGCACGAGAGGAACCTACATTTATGGCCATACCACTGATAGAAGAAGCAACCACCGAAGAGACTGTCCCAGAGGAAATCAAGGAAGTACTATACAGCTACACCGACATCATGCCAGAGAGTCTACCACAAACACTACCACCTCGTCGAGGCATTGACCACGAAATCGAACTCCTTCCCGGAGTTAAGCCGCCAGCAAAGAACGCATACCGGATGGCTCCGCCCGAGCTAGCCGAATTGAGGAAACAACTAGATGAGTTGTTGAAGGCGGGATTCATTCGCCCGGCAAAGGCCCCTTATGGAGCCCCCGTACTATTCCAGAAGAAGAAAGATGGGACGTTGCGTCTATGCATAGACTATAGAGCCTTAAACAAGGTGACAGTACGCAACAAATATCCTCTGCCGATAATATCCGACTTGTTCGACCAACTTCACGGGGCCAAGTACTTCACGAAGTTGGACTTACGATCAGGATATTATCAAGTACGGATTGCCGAAGGGGACGAACCCAAGACGACGTGCGTAACAAGATATGGGGCCTTTGAATTCCTAGTAATGCCCTTTGGCTTGACAAACGCCCCAGCTACGTTCTGCACGTTGATGAACCAGGTCTTCTACGAATACCTGGATCAGTTCGTCATAGTATACCTCGACGACATTGTTGTTTACAGCACAACCCTCGAGGAACACAAAGTGCATTTGAAGTTAGTGTTTGACAAGCTCCGGCAGAACCAGCTGTATGTGAAGAAGGAGAAATGTGCATTCGCACAAACATGCATCAACTTCCTTGGACACGTCGTCAGATGTGGACAAATCAGTATGGATAGCGACAAGATAAAAGCTATCCAAGAATGGAAGGTTCCTACTTCCGTATCTGAATTGCGGTCCTTCTTAGGACTAGCCAACTATTATAGGCGGTTCGTCGAAGGGTTTTCACGACGAGCCGCCCCATTGACAGAGCTGTTGAAGAAAGACCACCCGTGGTTGTGGTCGAATGATGGTCAAATGGCCTTTGAAAATCTGAAAACAACCATGACGAGGGGTCCTGTCCTCGGGTTGGTAGATGTCACAAAGCCATTTGAAGTAGAAACCGATGCTTCCGACTTTGCTCTCGGTGGAGTCCTCATTCAAGAAGGCCACCCCATCGCTTACGAAAGTCGAAAGCTCAACGATGCTGAACGAAGATACACTGTCTCCGAGAAAGAAATGCTGGCTGTAGTCCATTGCCTTCGAGTCTGGAGACAGTATCTCTTAGGATCACAGTTCGTAGTGAAGACGGATAACAGTGCCACTTGCCACTTCTTTGATCAACCAAAATTAACAGCAAAACAAGCCCGGTGGCAGGAGTCGTTGGCCGAATTCGACTTCAAGTTCGAACACAAAGCAGGGAAGAGTAATCAAGCAGCCGACGCGTTGAGTCGGAAGGGCGAACATGCGGCCCTGTGCATGTTAGCCCACATTCACTCAAGTAAGATCGATGGATCGATGCGCGACATCATCAAAGAACATTTACACAAAGACCCATCGGCCAAAGCTGTTGTCGAACTAGCTAAGGCTGGAAAGACACGGCAGTTTTGGGTTGAGGGGGACCTCCTGATAACCAAAGGAAACAGGTTGTACGTCCCAAGAACGGGGGAACTGCGGAAGAAACTCATTCAGGAATGTCACGATACCTTGTGGGCCGGACATCCTGGGTGGCAAAGAACATACGCCCTAATAAAGAAGGGGTACTTCTGGCCAAACATGCGAGACGACATCATGCAATACACCAAGACGTGCCTCATCTGCCAACAGGATAAGGTCGAGAAAGCCAAAGTCTCTGGACTCTTGGAACCTCTACCTGTGCCAACAAGACCCTGGGAAAGTGTATCTCTGGACTTCATAACACACCTCCCAAAGGTCGGGGAATATGACGCCATCTTGGTCATTGTAGACCGATTCTCCAAATATGCGACATTCATCCCCACTCCCAAATTATGCTCGGCGGAACTCACAGCCCAACTGTTTTTCAAACACGTTGTAAAGTTATGGGGCATTCCGTCGAGCATCATCAGTGATAGGGATGGCAGATTCATTGGGACGTTCTGGACTGAGTTATTCGCTTTCTTGGGAACAACCTTGAACATCTCCTCGAGTTATCACCCTCAAACCGATGGACAGACAGAACGGTTCAATTGCTTGCTCGAAGAATACTTACGTCACTTCGTCGACGCTCGCCAAAAGAACTGGATACAATTGCTAGATGTCGCCCAATTTTGCTTCAATTGCCAAACCAGCTCATCTACAGGGAAGAGTCCCTTCGAAATTGTAAGTGGACGACAACCGGCCTTACCCCATATTATTGATCATCCTTATGCAGGAAAAAACCCTCAAGCTCACAACTTTACAAGGGAATGGAAGCAGACAACAGATATAGCCCGGGCATATTTAGAGAAGGCTTCCAAGCATATGAAGAAATGGGCGGACAAGAAGCGTCGCCCCCTTCATTTTCGTGCAGGAGATCAAGTCCTTATCAAGCTGAGACCAGAACAGATCAGATTTCGTAGCCGAAAGGACCAGAGACTAGTTCGTAAATATGAAGGCCCGGTTGAAGTCCTTAAAAAGATCGGGGCTACCTCCTACCGAGTGGCACTACCCGCATGGATGAAAATCCACCCCGTCATTCATGTGAGCAACTTGAAGCCCTATCACCCTGATCCAGACGACGACCAACGAAATGCAACCACAAGACCGAACATCGATCTGAAGCAAAAAGAAACAAAGGAAGTGGAAGAGATCCTAGCCGACAGGGTTAGGAAGATAGGAAGACCTGTACGGACGATTCGTGAATTCCTTGTCAAATGGAAGAATCTCCCTACAGAGGAAACAAGCTGGGAACGCGCCGAAGATCTGAACTCCGCCGCCACCCACATCACAAGGTATGAAAGTAGTCGGTTGACAGGGACGTCAACCAATTAGGTGGGGGAGGATGTCACGGTCATGCTTGTCCAGGGCATGTTGCCCATGGCCGCATGCCCATGACAAGCCAAACCCTTGTCATGTCTTTTCATTCTAGTGTTTTTCCTTTTGTAATTCTAAAGCGTATGACACCTCAAAAATATCATGTCTACGCCTGCCAGAACTAAAATGGCCCAGAATGTACTATAGGGGGATATGACTAGTCGTCAACTTCTCCCTACCCAAGGTTATATATGCTAAGCCGTTGTTATCTTTCTCTTGCTTGCTTATATAACGTCTCTTTCTAAAAATCTCTCTTTCTCAAATCTCTCTCTCCTCGTTTTCTAAAACCTTCTTTTAAAACCGAGGCTAGAGGCTTGACCGTACGTCGCTTGGCCGTAGGCGACGCAAGAACAAATAGGCTCAACTCACTTGTTGCTGGAAAGTGAGTGCCGCACAATCGCTAGTCCGCTGCCTTCGAAAGTGCGATTGTGTCAAGGGGCGCCTGAGACGGCGATAGAGAGGTTGAAGAAGGAGAAATTCGATGGGTTTGGGGGAGAAGATTTGGGGAATTGTAGTGTGTGTTATGATGAGATGAAGGAGGGCGGGGAAGAAGTGATCAGAATCCCCTGCGGACATGTGTATCATAAGTCTTGTGTTCTCACTTGGCTTCAAAGGAACAACTCATGTCCTCTGTGCAGAAAGAAAATAGAAGCTTAA

mRNA sequence

ATGTCTTTCCCAGATTCAGTCACATTCCGCTGCAATCTCCACAGCTACCATGGTCCCGATCAGCTTCTCCAAATTCGAATAAGTCATTCAAGCCGTCTGTTTATCGGATCGCCGTTCCCTGGACATCCTTTCAATATCGTCTATGAAACTCTCACTACTATAACGGTGGATGCTCAGTTCTCCCTTCCTTTGCGGGAGCTCGAAGATCCGTTGTTCTGCCGAGCTTACATCGAAGAATTTCTAAGTTCTTACAACCTTGATGCCACAATCAACAACGCCATTGCTCAGAGGATTGCCTCTTTCGTCATTCAAATGGCGTGCGGAAACTACGAGATGACGTTCTACATCGTTGCGGAAATCGATTACATCCAGATTGTGTGTTATGATGAGATGAAGGAGGGCGGGGAAGAAGTGATCAGAATCCCCTGCGGACATGTGTATCATAAGTCTTGTGTTCTCACTTGGCTTCAAAGGAACAACTCATGTCCTCTGTGCAGAAAGAAAATAGAAGCTTAA

Coding sequence (CDS)

ATGTCTTTCCCAGATTCAGTCACATTCCGCTGCAATCTCCACAGCTACCATGGTCCCGATCAGCTTCTCCAAATTCGAATAAGTCATTCAAGCCGTCTGTTTATCGGATCGCCGTTCCCTGGACATCCTTTCAATATCGTCTATGAAACTCTCACTACTATAACGGTGGATGCTCAGTTCTCCCTTCCTTTGCGGGAGCTCGAAGATCCGTTGTTCTGCCGAGCTTACATCGAAGAATTTCTAAGTTCTTACAACCTTGATGCCACAATCAACAACGCCATTGCTCAGAGGATTGCCTCTTTCGTCATTCAAATGGCGTGCGGAAACTACGAGATGACGTTCTACATCGTTGCGGAAATCGATTACATCCAGATTGTGTGTTATGATGAGATGAAGGAGGGCGGGGAAGAAGTGATCAGAATCCCCTGCGGACATGTGTATCATAAGTCTTGTGTTCTCACTTGGCTTCAAAGGAACAACTCATGTCCTCTGTGCAGAAAGAAAATAGAAGCTTAA
BLAST of CmoCh06G007760 vs. Swiss-Prot
Match: YGI4_SCHPO (Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.04c PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-08
Identity = 20/45 (44.44%), Postives = 34/45 (75.56%), Query Frame = 1

Query: 126 VCYDEMKEGGE-EVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI 170
           +CYD+M E  E +  ++PCGH++ K+C+  WL+ + +CPLCRK++
Sbjct: 109 ICYDDMNENDEKQATKMPCGHIFGKNCLQKWLENHCTCPLCRKEV 153

BLAST of CmoCh06G007760 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.7e-08
Identity = 22/44 (50.00%), Postives = 33/44 (75.00%), Query Frame = 1

Query: 126 VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI 170
           VC D+ +EG  E  ++PC H+YHK C+L WL+ +NSCP+CR ++
Sbjct: 226 VCMDDFEEG-TEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHEL 268

BLAST of CmoCh06G007760 vs. Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 23/44 (52.27%), Postives = 32/44 (72.73%), Query Frame = 1

Query: 126 VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI 170
           VC  E +EG E V ++PC H++H SC+L WL + NSCPLCR ++
Sbjct: 81  VCLLEFEEG-ETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHEL 123

BLAST of CmoCh06G007760 vs. Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 1

Query: 126 VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI 170
           VC DE  E G E  ++PC H+YH  C++ WL ++NSCP+CR+++
Sbjct: 192 VCKDEF-ELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234

BLAST of CmoCh06G007760 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07
Identity = 22/41 (53.66%), Postives = 31/41 (75.61%), Query Frame = 1

Query: 126 VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCR 167
           VC DE  E G +V ++PC HV+H+ C+L WL+ +NSCP+CR
Sbjct: 218 VCMDEF-EDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 257

BLAST of CmoCh06G007760 vs. TrEMBL
Match: A0A0A0K696_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.0e-21
Identity = 71/221 (32.13%), Postives = 105/221 (47.51%), Query Frame = 1

Query: 1   MSFPDSVTFRCNLH-SYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQ 60
           MSF  S   +  L+ S  G + +LQ+ IS   ++   SP  G P  ++++T      +A 
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIASFVIQMACGNYEMTFYIVAE 120
           F L LR+L+ PLF   YI + LSS N+    +  +A+RIAS ++QM   N E  F+I+AE
Sbjct: 61  FYLSLRQLQSPLF---YITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAE 120

Query: 121 IDYIQIVCYDEMKEGG---EEVIR------------------------------------ 170
           +D+I+++    M  GG   EE +                                     
Sbjct: 121 VDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICL 180

BLAST of CmoCh06G007760 vs. TrEMBL
Match: A0A0A0LRB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.0e-21
Identity = 73/227 (32.16%), Postives = 107/227 (47.14%), Query Frame = 1

Query: 1   MSFPDSVTFRCNLHSYHG--------PDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLT 60
           MS P + +FRC++             P Q +++R+ H S+L +    P H   I+ +T  
Sbjct: 1   MSSPTTFSFRCSIRCNANGSAATNGQPLQFVELRLGHFSQLVLS---PSH--QILQQTSP 60

Query: 61  TITVDAQFSLPLRELEDPLFC-RAYIEEFLSSYNLDATINNAIAQRIASFVIQMACGNYE 120
            +  D     PLRELEDP F   + +  FLSSYN+   + +AI  +I+SF  Q+  GN  
Sbjct: 61  ILISDTLIRFPLRELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGNLN 120

Query: 121 MTFYIVAEIDYIQIVCYD---------------------EMKE-----GGEEVIR----- 172
             F+I+A +D++     D                      MKE     GGEE+       
Sbjct: 121 SNFHIIAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVC 180

BLAST of CmoCh06G007760 vs. TrEMBL
Match: A0A0A0K2W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.0e-21
Identity = 71/221 (32.13%), Postives = 105/221 (47.51%), Query Frame = 1

Query: 1   MSFPDSVTFRCNLH-SYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQ 60
           MSF  S   +  L+ S  G + +LQ+ IS   ++   SP  G P  ++++T      +A 
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIASFVIQMACGNYEMTFYIVAE 120
           F L LR+L+ PLF   YI + LSS N+    +  +A+RIAS ++QM   N E  F+I+AE
Sbjct: 61  FYLSLRQLQSPLF---YITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAE 120

Query: 121 IDYIQIVCYDEMKEGG---EEVIR------------------------------------ 170
           +D+I+++    M  GG   EE +                                     
Sbjct: 121 VDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICL 180

BLAST of CmoCh06G007760 vs. TrEMBL
Match: A0A0A0L2F8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G036440 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-16
Identity = 50/134 (37.31%), Postives = 79/134 (58.96%), Query Frame = 1

Query: 1   MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQF 60
           M    + TFR ++    G +Q LQIR+    RL  GSP  G P+ I+ E+ +    +A F
Sbjct: 1   MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF 60

Query: 61  SLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIASFVIQ-MACGNYEMTFYIVAE 120
            LPLR++ED   C  YI + LSS+NL    +  I+++I S V++ +  G+Y+  F +VAE
Sbjct: 61  PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE 120

Query: 121 IDYIQIVCYDEMKE 134
           ID+I++  + E +E
Sbjct: 121 IDHIRMYFWTEEEE 134

BLAST of CmoCh06G007760 vs. TrEMBL
Match: A0A0A0KYC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003650 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-15
Identity = 66/201 (32.84%), Postives = 97/201 (48.26%), Query Frame = 1

Query: 1   MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQF 60
           MSF  S      L++    + +L++++S+  R    S F      I+YET  T   +A F
Sbjct: 1   MSFEISSPIPYLLNANGFGNGVLEVQLSYLERAISVSSFSQR---ILYETQPTPFNNALF 60

Query: 61  SLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIASFVIQMACGN--YEMTFYIVA 120
            L + +L+ PLF   +I +FL S N+       IA++IASFV  M  GN  +   FY++A
Sbjct: 61  YLSVHQLQHPLF---HIRQFLYSLNIR---RETIARQIASFVAHMCNGNTGWNSNFYVIA 120

Query: 121 EIDYIQIVCYDEM--KEG--GEEVIR-----------------------------IPCGH 167
            +D ++++  +E    EG  G  V R                             IPCGH
Sbjct: 121 RVDLVRVIRIEEQPRAEGWRGVAVERLSKLKSEEEKGDCSVCLDELDCEKREVIRIPCGH 180

BLAST of CmoCh06G007760 vs. TAIR10
Match: AT1G60360.1 (AT1G60360.1 RING/U-box superfamily protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.6e-09
Identity = 21/44 (47.73%), Postives = 31/44 (70.45%), Query Frame = 1

Query: 126 VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI 170
           VC +E   GG+    +PC H+YHK C++ WL+ NNSCP+CR+ +
Sbjct: 226 VCMEEFIVGGDAT-ELPCKHIYHKDCIVPWLRLNNSCPICRRDL 268

BLAST of CmoCh06G007760 vs. TAIR10
Match: AT5G54990.1 (AT5G54990.1 RING/U-box superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 5.9e-09
Identity = 19/43 (44.19%), Postives = 31/43 (72.09%), Query Frame = 1

Query: 126 VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKK 169
           +C  E+  G   + ++PC HV+H+ C++TWL++N SCP+CR K
Sbjct: 176 ICLTELSSGVSRM-KLPCSHVFHRDCIMTWLKKNPSCPICRTK 217

BLAST of CmoCh06G007760 vs. TAIR10
Match: AT2G40830.2 (AT2G40830.2 RING-H2 finger C1A)

HSP 1 Score: 58.2 bits (139), Expect = 5.9e-09
Identity = 21/44 (47.73%), Postives = 32/44 (72.73%), Query Frame = 1

Query: 126 VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCRKKI 170
           VC DE  E G E  ++PC H+YH  C++ WL ++NSCP+CR+++
Sbjct: 192 VCKDEF-ELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234

BLAST of CmoCh06G007760 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 57.8 bits (138), Expect = 7.8e-09
Identity = 22/41 (53.66%), Postives = 31/41 (75.61%), Query Frame = 1

Query: 126 VCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCR 167
           VC DE  E G +V ++PC HV+H+ C+L WL+ +NSCP+CR
Sbjct: 218 VCMDEF-EDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 257

BLAST of CmoCh06G007760 vs. TAIR10
Match: AT5G02750.1 (AT5G02750.1 RING/U-box superfamily protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08
Identity = 42/162 (25.93%), Postives = 72/162 (44.44%), Query Frame = 1

Query: 9   FRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQFSLPLRELE 68
           F C  H  H PD L     + + R  +G+ +     N++       T DA   +P   +E
Sbjct: 106 FLCETHQLH-PDVLEAS--ADNWREILGNTYSN---NMLSNNSGLWTCDAGILMPY--IE 165

Query: 69  DPLFCRAYIEEFLSSYN----LDATINNAIAQRIASFVIQMACGNYEMTFYIVAEIDYIQ 128
             + C+ +++  +  YN     D      +    A+ V   A   + +      E++ + 
Sbjct: 166 TLVRCKRFVD-IMGGYNHLRRRDQKEGYQVPAARAAVVALRAVEVFNVAASNAGEVECV- 225

Query: 129 IVCYDEMKEGGEEVIRIPCGHVYHKSCVLTWLQRNNSCPLCR 167
            +C +EM EG  +V  +PC H +H  C+L WL + N+CP CR
Sbjct: 226 -ICKEEMSEG-RDVCEMPCQHFFHWKCILPWLSKKNTCPFCR 255

BLAST of CmoCh06G007760 vs. NCBI nr
Match: gi|449454422|ref|XP_004144954.1| (PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 2.9e-21
Identity = 71/221 (32.13%), Postives = 105/221 (47.51%), Query Frame = 1

Query: 1   MSFPDSVTFRCNLH-SYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQ 60
           MSF  S   +  L+ S  G + +LQ+ IS   ++   SP  G P  ++++T      +A 
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIASFVIQMACGNYEMTFYIVAE 120
           F L LR+L+ PLF   YI + LSS N+    +  +A+RIAS ++QM   N E  F+I+AE
Sbjct: 61  FYLSLRQLQSPLF---YITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAE 120

Query: 121 IDYIQIVCYDEMKEGG---EEVIR------------------------------------ 170
           +D+I+++    M  GG   EE +                                     
Sbjct: 121 VDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICL 180

BLAST of CmoCh06G007760 vs. NCBI nr
Match: gi|778674460|ref|XP_011650219.1| (PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 2.9e-21
Identity = 73/227 (32.16%), Postives = 107/227 (47.14%), Query Frame = 1

Query: 1   MSFPDSVTFRCNLHSYHG--------PDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLT 60
           MS P + +FRC++             P Q +++R+ H S+L +    P H   I+ +T  
Sbjct: 1   MSSPTTFSFRCSIRCNANGSAATNGQPLQFVELRLGHFSQLVLS---PSH--QILQQTSP 60

Query: 61  TITVDAQFSLPLRELEDPLFC-RAYIEEFLSSYNLDATINNAIAQRIASFVIQMACGNYE 120
            +  D     PLRELEDP F   + +  FLSSYN+   + +AI  +I+SF  Q+  GN  
Sbjct: 61  ILISDTLIRFPLRELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGNLN 120

Query: 121 MTFYIVAEIDYIQIVCYD---------------------EMKE-----GGEEVIR----- 172
             F+I+A +D++     D                      MKE     GGEE+       
Sbjct: 121 SNFHIIAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVC 180

BLAST of CmoCh06G007760 vs. NCBI nr
Match: gi|778730084|ref|XP_011659694.1| (PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 2.9e-21
Identity = 71/221 (32.13%), Postives = 105/221 (47.51%), Query Frame = 1

Query: 1   MSFPDSVTFRCNLH-SYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQ 60
           MSF  S   +  L+ S  G + +LQ+ IS   ++   SP  G P  ++++T      +A 
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FSLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIASFVIQMACGNYEMTFYIVAE 120
           F L LR+L+ PLF   YI + LSS N+    +  +A+RIAS ++QM   N E  F+I+AE
Sbjct: 61  FYLSLRQLQSPLF---YITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAE 120

Query: 121 IDYIQIVCYDEMKEGG---EEVIR------------------------------------ 170
           +D+I+++    M  GG   EE +                                     
Sbjct: 121 VDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICL 180

BLAST of CmoCh06G007760 vs. NCBI nr
Match: gi|778688326|ref|XP_011652721.1| (PREDICTED: uncharacterized protein LOC105435064 [Cucumis sativus])

HSP 1 Score: 94.7 bits (234), Expect = 1.6e-16
Identity = 50/134 (37.31%), Postives = 79/134 (58.96%), Query Frame = 1

Query: 1   MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQF 60
           M    + TFR ++    G +Q LQIR+    RL  GSP  G P+ I+ E+ +    +A F
Sbjct: 1   MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF 60

Query: 61  SLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIASFVIQ-MACGNYEMTFYIVAE 120
            LPLR++ED   C  YI + LSS+NL    +  I+++I S V++ +  G+Y+  F +VAE
Sbjct: 61  PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE 120

Query: 121 IDYIQIVCYDEMKE 134
           ID+I++  + E +E
Sbjct: 121 IDHIRMYFWTEEEE 134

BLAST of CmoCh06G007760 vs. NCBI nr
Match: gi|700200785|gb|KGN55918.1| (hypothetical protein Csa_3G036440 [Cucumis sativus])

HSP 1 Score: 94.7 bits (234), Expect = 1.6e-16
Identity = 50/134 (37.31%), Postives = 79/134 (58.96%), Query Frame = 1

Query: 1   MSFPDSVTFRCNLHSYHGPDQLLQIRISHSSRLFIGSPFPGHPFNIVYETLTTITVDAQF 60
           M    + TFR ++    G +Q LQIR+    RL  GSP  G P+ I+ E+ +    +A F
Sbjct: 1   MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF 60

Query: 61  SLPLRELEDPLFCRAYIEEFLSSYNLDATINNAIAQRIASFVIQ-MACGNYEMTFYIVAE 120
            LPLR++ED   C  YI + LSS+NL    +  I+++I S V++ +  G+Y+  F +VAE
Sbjct: 61  PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE 120

Query: 121 IDYIQIVCYDEMKE 134
           ID+I++  + E +E
Sbjct: 121 IDHIRMYFWTEEEE 134

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YGI4_SCHPO2.8e-0844.44Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strai... [more]
RING1_GOSHI4.7e-0850.00E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
RN181_XENTR1.1e-0752.27E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1[more]
RHC1A_ARATH1.1e-0747.73Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2... [more]
RNG1L_ARATH1.4e-0753.66E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
Match NameE-valueIdentityDescription
A0A0A0K696_CUCSA2.0e-2132.13Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1[more]
A0A0A0LRB0_CUCSA2.0e-2132.16Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1[more]
A0A0A0K2W2_CUCSA2.0e-2132.13Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1[more]
A0A0A0L2F8_CUCSA1.1e-1637.31Uncharacterized protein OS=Cucumis sativus GN=Csa_3G036440 PE=4 SV=1[more]
A0A0A0KYC0_CUCSA1.6e-1532.84Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003650 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G60360.11.6e-0947.73 RING/U-box superfamily protein[more]
AT5G54990.15.9e-0944.19 RING/U-box superfamily protein[more]
AT2G40830.25.9e-0947.73 RING-H2 finger C1A[more]
AT3G19950.17.8e-0953.66 RING/U-box superfamily protein[more]
AT5G02750.11.0e-0825.93 RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449454422|ref|XP_004144954.1|2.9e-2132.13PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus][more]
gi|778674460|ref|XP_011650219.1|2.9e-2132.16PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus][more]
gi|778730084|ref|XP_011659694.1|2.9e-2132.13PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus][more]
gi|778688326|ref|XP_011652721.1|1.6e-1637.31PREDICTED: uncharacterized protein LOC105435064 [Cucumis sativus][more]
gi|700200785|gb|KGN55918.1|1.6e-1637.31hypothetical protein Csa_3G036440 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G007760.1CmoCh06G007760.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 126..166
score: 3.4
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 125..165
score: 2.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 126..166
score: 11
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 126..169
score: 8.4
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 125..170
score: 3.0
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 126..169
score: 5.3

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G007760Cucurbita maxima (Rimu)cmacmoB316
CmoCh06G007760Cucurbita maxima (Rimu)cmacmoB341
CmoCh06G007760Cucurbita maxima (Rimu)cmacmoB623
CmoCh06G007760Cucurbita maxima (Rimu)cmacmoB626
CmoCh06G007760Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G007760Wild cucumber (PI 183967)cmocpiB823
CmoCh06G007760Wild cucumber (PI 183967)cmocpiB836
CmoCh06G007760Cucumber (Chinese Long) v2cmocuB826
CmoCh06G007760Melon (DHL92) v3.5.1cmomeB736
CmoCh06G007760Melon (DHL92) v3.5.1cmomeB756
CmoCh06G007760Watermelon (Charleston Gray)cmowcgB730
CmoCh06G007760Watermelon (Charleston Gray)cmowcgB737
CmoCh06G007760Watermelon (97103) v1cmowmB784
CmoCh06G007760Watermelon (97103) v1cmowmB795
CmoCh06G007760Cucurbita pepo (Zucchini)cmocpeB767
CmoCh06G007760Cucurbita pepo (Zucchini)cmocpeB768
CmoCh06G007760Cucurbita pepo (Zucchini)cmocpeB792
CmoCh06G007760Bottle gourd (USVL1VR-Ls)cmolsiB734
CmoCh06G007760Cucumber (Gy14) v2cgybcmoB675
CmoCh06G007760Melon (DHL92) v3.6.1cmomedB834
CmoCh06G007760Melon (DHL92) v3.6.1cmomedB861
CmoCh06G007760Silver-seed gourdcarcmoB1166
CmoCh06G007760Silver-seed gourdcarcmoB1172
CmoCh06G007760Silver-seed gourdcarcmoB1256
CmoCh06G007760Cucumber (Chinese Long) v3cmocucB0974
CmoCh06G007760Watermelon (97103) v2cmowmbB808
CmoCh06G007760Watermelon (97103) v2cmowmbB819
CmoCh06G007760Wax gourdcmowgoB0986
CmoCh06G007760Wax gourdcmowgoB0996
CmoCh06G007760Cucurbita moschata (Rifu)cmocmoB271
CmoCh06G007760Cucurbita moschata (Rifu)cmocmoB291
CmoCh06G007760Cucurbita moschata (Rifu)cmocmoB438
CmoCh06G007760Cucurbita moschata (Rifu)cmocmoB442
CmoCh06G007760Cucumber (Gy14) v1cgycmoB0834
CmoCh06G007760Cucumber (Gy14) v1cgycmoB0893