CmoCh06G007260 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G007260
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionF-box protein PP2-A13
LocationCmo_Chr06 : 3719851 .. 3722188 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACCAGTGGGTCAATCTAGTAGTATATGAACAGCAACCACCAACAAAAGTCCACTTTCCATCCCCCGATTTGCACAAAACTAACAATTTCAAGCAACCCCATGAGCTCAATTCTCCATTTTCCCTCTATATAATCAACCCCTTTTGATTTTTCTCTCATGATCGTCTTTCTTCTCTGATGGGTGTTAATTTCTCCGCGTTTTTTCGCCTCCATAATGGGTCTCACCCGCCGTCACCGCCGCCGCCGCCGCCGTACCCCTGTCTCGGGGACTTGTCGGAGAGCTGTGTGGCGGCTGTTATGGAGTATTTGAGTCCGGTGGAGATTTGTAAACTGGCAAGGCTGAATCAGGCCTTTCGTGCGGCTTCCTGGGCCGATTGCGTTTGGGAATCTAAATTGCCCCTTAATTATAGGTTTCTTGTTCGACGAGTTATTGGGGATTTTGCTCCGATTATGAGTAAAAGAGAGATTTACACCAGGCTTTGTCACCAGAATCCATTAGATGGTGGAAATAAGGTAAAATTTCATCTCATCGTTTCTTCTTTAATACCGGATTCGATGATTTTTTACAAAGTTAGGGCAAATTGTTCGTTGATTCTCTTCTGGGTATTTGATTTTTTATATTTCGTTTTTCGTTTCAGAAATTTTGGCTGGATAAATACTCCGGCGGTGTTTGTTTATCGATTTCTTCAATGGATTTGAGGATTACTGGGATTGATGATCGGAGATATTGGAATCGTATCTCGACTGAAGAATCCAGGTGAGTTAGATTCATCAAGAACATATTGAAACAGAACTAATTTGTTTATGCCTTTTGAATTGCTTTGAAATGAATCTTTCTCATTAGGATGTTGAAGTTCTGTTTGTTTCTTAGACTGATACAAGGATTTTCTTGCTTGAATTTCATGGAGTTTTTTTTGATCTTGTTCGTTCAATCTTAATGTTACATCTGCTGGTAAAGTTTGATAAGAACAGTGATTTGGTATGGATGCAAGTTTTGATCTCGATTCATCGGGAAAAGCGTTTTTATGAGTATTAGTATCGTATTCGAATTCGTATCGTGTGCAGTGTTATTCTTGACGAAGTTTTACCATGTCATTGATATTTGGAAGCCTTTGAAACTTATAGAACGGAAGGATATGTATATGTGAGAATCCACATCGATTAGAGTGGGTTTAGGGTTTAGAGCTCGCTCGGCTCTGAAGGGGGTAGATTGTGAGATTCCACATCGGTTGGAGAGGAGAATGAAACATTCTTTATAACGGCGTGGAAACTTCTCCCGTTTTAAAAACTTTGAGGGGAAGCCCGAAAGAAAAAACCCAAAGAGGATAATATATGTGAGATTCCATATCGATTGGAGAGGGGAACGAGTGTCAGCTCACTCGGCCCTGAAGGGGATAGATTGTGAGATACCACCTCGGTTGGGGAGGAAAACAAAATATTCTTTGTAAGGTGTGGAAACTTATCCCTAGTAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCAAAGGTGAAAACCCAAAGAAGACAATACATGTGAGATCCCATATCGATTGGCCCTAAATGGTGGTGGATTGTGAGATCTCACATCGGTTGGGGAGGAAAACGAAACATTCAACCTCTCCCTAACAAAGGCTTTTTAAAAATCTTGAGGGAGAGTCCAAAAGGAAAATTTCAAAGAGGACAATATGAGTCTTACCATGTTCATTGGTCTGTATCTGTCGTAGCACGCTCGGGATAGTGTTACTGATATCAGTTTTTCATGTTCTTTCTTGTAGATTCAATATTGTTGCATATCTTCAGCAAACATGGTGGCTTGAAGTTGGTGGAGAGGTAGATTTTCCATTGCCACCAGGAACTTACAGCCTCTACTTCAGGTTGCAATTGGGTCAGACATCGTGGAGGTTTGGTCGTAAAATCCATAACCTCGAGCACGTTCATGGCTGGAACATAAAGCCCACACAATTCCAGCTTTGGACTTCAGATGGCCAGCACGCCAAAACTGAACGCTATTTAAACGAAGCTGGTAAATGGACTCTGCATCATGCAGGTAACTTTCATGTCGATGCTCGAAACGAGTCGATAAGGATCAAATTCTCTATGACTCAAATCGACTGCACACACACAAAAGGTGGTCTCTGTTTAGACTCAGTGCTGATTTGCCCAGTCGGGTATGATCAGAGATCAAAGTGTCGTTGACTCGTTCGGTCTGGATTTTGTTGTCGGTAGAAATCGTGTAAAAATATGGTAATTTTGGTGTCGAGCTTCCTTCCCAAATGACTGGCTTTACTTTTTCTAAGCCTTGAGTTGTTTGTGTTGAAAAAAATGAGGCAATGTTTAT

mRNA sequence

AAACCAGTGGGTCAATCTAGTAGTATATGAACAGCAACCACCAACAAAAGTCCACTTTCCATCCCCCGATTTGCACAAAACTAACAATTTCAAGCAACCCCATGAGCTCAATTCTCCATTTTCCCTCTATATAATCAACCCCTTTTGATTTTTCTCTCATGATCGTCTTTCTTCTCTGATGGGTGTTAATTTCTCCGCGTTTTTTCGCCTCCATAATGGGTCTCACCCGCCGTCACCGCCGCCGCCGCCGCCGTACCCCTGTCTCGGGGACTTGTCGGAGAGCTGTGTGGCGGCTGTTATGGAGTATTTGAGTCCGGTGGAGATTTGTAAACTGGCAAGGCTGAATCAGGCCTTTCGTGCGGCTTCCTGGGCCGATTGCGTTTGGGAATCTAAATTGCCCCTTAATTATAGGTTTCTTGTTCGACGAGTTATTGGGGATTTTGCTCCGATTATGAGTAAAAGAGAGATTTACACCAGGCTTTGTCACCAGAATCCATTAGATGGTGGAAATAAGAAATTTTGGCTGGATAAATACTCCGGCGGTGTTTGTTTATCGATTTCTTCAATGGATTTGAGGATTACTGGGATTGATGATCGGAGATATTGGAATCGTATCTCGACTGAAGAATCCAGATTCAATATTGTTGCATATCTTCAGCAAACATGGTGGCTTGAAGTTGGTGGAGAGGTAGATTTTCCATTGCCACCAGGAACTTACAGCCTCTACTTCAGGTTGCAATTGGGTCAGACATCGTGGAGGTTTGGTCGTAAAATCCATAACCTCGAGCACGTTCATGGCTGGAACATAAAGCCCACACAATTCCAGCTTTGGACTTCAGATGGCCAGCACGCCAAAACTGAACGCTATTTAAACGAAGCTGGTAAATGGACTCTGCATCATGCAGGTAACTTTCATGTCGATGCTCGAAACGAGTCGATAAGGATCAAATTCTCTATGACTCAAATCGACTGCACACACACAAAAGGTGGTCTCTGTTTAGACTCAGTGCTGATTTGCCCAGTCGGGTATGATCAGAGATCAAAGTGTCGTTGACTCGTTCGGTCTGGATTTTGTTGTCGGTAGAAATCGTGTAAAAATATGGTAATTTTGGTGTCGAGCTTCCTTCCCAAATGACTGGCTTTACTTTTTCTAAGCCTTGAGTTGTTTGTGTTGAAAAAAATGAGGCAATGTTTAT

Coding sequence (CDS)

ATGGGTGTTAATTTCTCCGCGTTTTTTCGCCTCCATAATGGGTCTCACCCGCCGTCACCGCCGCCGCCGCCGCCGTACCCCTGTCTCGGGGACTTGTCGGAGAGCTGTGTGGCGGCTGTTATGGAGTATTTGAGTCCGGTGGAGATTTGTAAACTGGCAAGGCTGAATCAGGCCTTTCGTGCGGCTTCCTGGGCCGATTGCGTTTGGGAATCTAAATTGCCCCTTAATTATAGGTTTCTTGTTCGACGAGTTATTGGGGATTTTGCTCCGATTATGAGTAAAAGAGAGATTTACACCAGGCTTTGTCACCAGAATCCATTAGATGGTGGAAATAAGAAATTTTGGCTGGATAAATACTCCGGCGGTGTTTGTTTATCGATTTCTTCAATGGATTTGAGGATTACTGGGATTGATGATCGGAGATATTGGAATCGTATCTCGACTGAAGAATCCAGATTCAATATTGTTGCATATCTTCAGCAAACATGGTGGCTTGAAGTTGGTGGAGAGGTAGATTTTCCATTGCCACCAGGAACTTACAGCCTCTACTTCAGGTTGCAATTGGGTCAGACATCGTGGAGGTTTGGTCGTAAAATCCATAACCTCGAGCACGTTCATGGCTGGAACATAAAGCCCACACAATTCCAGCTTTGGACTTCAGATGGCCAGCACGCCAAAACTGAACGCTATTTAAACGAAGCTGGTAAATGGACTCTGCATCATGCAGGTAACTTTCATGTCGATGCTCGAAACGAGTCGATAAGGATCAAATTCTCTATGACTCAAATCGACTGCACACACACAAAAGGTGGTCTCTGTTTAGACTCAGTGCTGATTTGCCCAGTCGGGTATGATCAGAGATCAAAGTGTCGTTGA
Homology
[Close]
BLAST of CmoCh06G007260 vs. Swiss-Prot
Match: P2A12_ARATH (F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 6.9e-92
Identity = 151/256 (58.98%), Postives = 191/256 (74.61%), Query Frame = 1 

Query: 27  PCLGDLSESCVAAVMEYLSPVEICKLARLNQAFRAASWADCVWESKLPLNYRFLVRRVIG 86
           P LGDL E+CVA ++E L PVEIC+ ++LN+AFR ASWADCVWESKLP NYR ++ +++G
Sbjct: 26  PGLGDLPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKILG 85

Query: 87  DFAPIMSKREIYTRLCHQNPLDGGNKKFWLDKYSGGVCLSISSMDLRITGIDDRRYWNRI 146
            F   + KR +Y  L   N  D   KK W+DK + GVCLSIS+  L ITGIDDRRYW+ I
Sbjct: 86  GFPENLQKRHLYAFLSRINSFDDATKKVWIDKRTSGVCLSISAKGLSITGIDDRRYWSHI 145

Query: 147 STEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTYSLYFRLQLGQTSWRFGRKIHNLEHVH 206
            T+ESRF+ VAYLQQ WW EV GE+DFP P GTYS++FRLQLG++   FGR++ N E VH
Sbjct: 146 PTDESRFSSVAYLQQIWWFEVDGEIDFPFPVGTYSIFFRLQLGRSGKWFGRRVCNTEQVH 205

Query: 207 GWNIKPTQFQLWTSDGQHAKTERYLNEAGKWTLHHAGNFHV-DARNESIRIKFSMTQIDC 266
           GW+IKP +FQLWT DGQ++ ++  L E G W  +HAG+  V ++   S +IKFSMTQIDC
Sbjct: 206 GWDIKPVRFQLWTEDGQYSSSQCMLTERGNWIHYHAGDVVVRESNRSSTKIKFSMTQIDC 265

Query: 267 THTKGGLCLDSVLICP 282
           THTKGGL LDSV++ P
Sbjct: 266 THTKGGLSLDSVVVYP 281

[Close]
BLAST of CmoCh06G007260 vs. Swiss-Prot
Match: P2A11_ARATH (F-box protein PP2-A11 OS=Arabidopsis thaliana GN=PP2A11 PE=1 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.7e-90
Identity = 148/256 (57.81%), Postives = 193/256 (75.39%), Query Frame = 1 

Query: 27  PCLGDLSESCVAAVMEYLSPVEICKLARLNQAFRAASWADCVWESKLPLNYRFLVRRVIG 86
           P LGDL ESCVA +++ L PVEIC+ ++LN AF  ASWAD VWESKLP +Y+ ++ +++G
Sbjct: 24  PGLGDLPESCVALILQNLDPVEICRFSKLNTAFHGASWADFVWESKLPPDYKLILEKILG 83

Query: 87  DFAPIMSKREIYTRLCHQNPLDGGNKKFWLDKYSGGVCLSISSMDLRITGIDDRRYWNRI 146
            F   + KR+I+T L   N  D GNKK W+DK +GG+CL  S+  L ITGIDDRRYW+ I
Sbjct: 84  SFPDNLRKRDIFTFLSRVNSFDEGNKKAWVDKRTGGLCLCTSAKGLSITGIDDRRYWSHI 143

Query: 147 STEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTYSLYFRLQLGQTSWRFGRKIHNLEHVH 206
            +++SRF  VAY+QQ WW +V GE+DFP P GTYS+YFRLQLG+   RFG K+ + E VH
Sbjct: 144 PSDDSRFASVAYVQQIWWFQVDGEIDFPFPAGTYSVYFRLQLGKPGKRFGWKVVDTEQVH 203

Query: 207 GWNIKPTQFQLWTSDGQHAKTERYLNEAGKWTLHHAGNFHV-DARNESIRIKFSMTQIDC 266
           GWNIKP +FQL T DGQH+ ++  L EAG W+ +HAG+F V  +++ S +IKFSMTQIDC
Sbjct: 204 GWNIKPVRFQLSTEDGQHSSSQCMLTEAGNWSHYHAGDFVVGKSKSSSTKIKFSMTQIDC 263

Query: 267 THTKGGLCLDSVLICP 282
           THTKGGLC+DSV++ P
Sbjct: 264 THTKGGLCVDSVVVYP 279

[Close]
BLAST of CmoCh06G007260 vs. Swiss-Prot
Match: P2A14_ARATH (F-box protein PP2-A14 OS=Arabidopsis thaliana GN=PP2A14 PE=1 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.7e-85
Identity = 145/268 (54.10%), Postives = 188/268 (70.15%), Query Frame = 1 

Query: 29  LGDLSESCVAAVMEYLSPVEICKLARLNQAFRAASWADCVWESKLPLNYRFLVRRVIGDF 88
           L D+ E+C+ A+  Y+ P EIC LAR+N++F  AS +D VWE KLP NY+FLVRR++ D 
Sbjct: 21  LEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILEDQ 80

Query: 89  AP-------IMSKREIYTRLCHQNPLDGGNKKFWLDKYSGGVCLSISSMDLRITGIDDRR 148
                    I  K+EIY RLC  N  D G K+ WLDK SG V L+IS   ++ITGIDDRR
Sbjct: 81  QQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKRSGKVFLAISPKAMKITGIDDRR 140

Query: 149 YWNRISTEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTYSLYFRLQLGQTSWRFGRKIHN 208
           YW  IS++ESRF  + YL+Q WWLE  G++ F   PG YSL F++QLG+   + GRK  +
Sbjct: 141 YWEHISSDESRFGSITYLRQIWWLEAVGKIRFEFAPGKYSLLFKIQLGKPIRKCGRKTCS 200

Query: 209 LEHVHGWNIKPTQFQLWTSDGQHAKTERYLNEAGKWTLHHAGNFHVDARNESIRIKFSMT 268
           L+ VHGW+IKP +FQL TSDGQ A +ER+L+E+G+W  HHAG+F V+ +N  + +KFSM 
Sbjct: 201 LDQVHGWDIKPVRFQLSTSDGQCAMSERHLDESGRWVYHHAGDFVVENQNSPVWVKFSML 260

Query: 269 QIDCTHTKGGLCLDSVLICPVGYDQRSK 290
           QIDCTHTKGGLCLD V+ICP  Y  + K
Sbjct: 261 QIDCTHTKGGLCLDCVIICPFEYRGKYK 288

[Close]
BLAST of CmoCh06G007260 vs. Swiss-Prot
Match: P2A13_ARATH (F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.8e-84
Identity = 148/255 (58.04%), Postives = 182/255 (71.37%), Query Frame = 1 

Query: 29  LGDLSESCVAAVMEYLSPVEICKLARLNQAFRAASWADCVWESKLPLNYRFLVRRVIGDF 88
           L DL E+CVA +M  L P EIC+LARLN+ FR AS AD +WESKLP NYR +  +V  + 
Sbjct: 25  LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEI 84

Query: 89  API-MSKREIYTRLCHQNPLDGGNKKFWLDKYSGGVCLSISSMDLRITGIDDRRYWNRIS 148
               + K+++Y +L   N  D G K+ W+DK +G +CLSISS  LRITGIDDRRYW+ I 
Sbjct: 85  TLTKLIKKDLYAKLSQPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIP 144

Query: 149 TEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTYSLYFRLQLGQTSWRFGRKIHNLEHVHG 208
           T+ESRF   AY+QQ WW EVGGE +   P GTYSL+FR+QLG+TS R GR+I N EH+HG
Sbjct: 145 TDESRFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIHG 204

Query: 209 WNIKPTQFQLWTSDGQHAKTERYL-NEAGKWTLHHAGNFHVDARNESIRIKFSMTQIDCT 268
           W+IKP +FQL TSD Q A +  YL N  G W+ +H G+F V   + S  IKFSMTQIDCT
Sbjct: 205 WDIKPVRFQLATSDNQQAVSLCYLNNNPGSWSHYHVGDFKVTNPDVSTGIKFSMTQIDCT 264

Query: 269 HTKGGLCLDSVLICP 282
           HTKGGLC+DSVLI P
Sbjct: 265 HTKGGLCIDSVLILP 279

[Close]
BLAST of CmoCh06G007260 vs. Swiss-Prot
Match: P2A15_ARATH (F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 5.3e-76
Identity = 138/268 (51.49%), Postives = 179/268 (66.79%), Query Frame = 1 

Query: 27  PCLGDLSESCVAAVMEYLSPVEICKLARLNQAFRAASWADCVWESKLPLNYRFLVRRVIG 86
           P LGD+ ESCVA V  YL+P EIC LA LN++FR A+ +D VWE KLP NY+ L+  +  
Sbjct: 19  PGLGDIPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLDLLPP 78

Query: 87  DFAPIMSKREIYTRLCHQNPLDGGNKKFWLDKYSGGVCLSISSMDLRITGIDDRRYWNRI 146
           +    +SK++I+  L    P D  NK+ W+D+ +G VC++IS+  + ITGI+DRRYWN I
Sbjct: 79  ERYHSLSKKDIFAVLSRPIPFDDDNKEVWIDRVTGRVCMAISARGMSITGIEDRRYWNWI 138

Query: 147 STEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTYSLYFRLQLGQTSWRFGRKIHNLEHVH 206
            TEESRF++VAYLQQ WW EV G V F LPPG YSL FR+ LG+ + R GR++ + E  H
Sbjct: 139 PTEESRFHVVAYLQQIWWFEVDGTVRFHLPPGVYSLSFRIHLGRFTKRLGRRVCHFELTH 198

Query: 207 GWNIKPTQFQLWTSDGQHAKTERYL-----NEA------GKWTLHHAGNFHVDARNESIR 266
           GW++KP +F L TSDGQ A  E YL     NEA      G W  +  G F V+    S  
Sbjct: 199 GWDLKPVRFSLSTSDGQEASCEYYLDDVERNEALGKHKRGYWIEYRVGEFIVNGSEPSTE 258

Query: 267 IKFSMTQIDCTHTKGGLCLDSVLICPVG 284
           I++SM QIDCTH+KGGLC+DSV I P+G
Sbjct: 259 IQWSMKQIDCTHSKGGLCVDSVFINPIG 286

[Close]
BLAST of CmoCh06G007260 vs. TrEMBL
Match: A0A0A0L4L6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G043900 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 1.9e-141
Identity = 236/291 (81.10%), Postives = 256/291 (87.97%), Query Frame = 1 

Query: 1   MGVNFSAFFRLHNGSHPPSPPPPPPYPCLGDLSESCVAAVMEYLSPVEICKLARLNQAFR 60
           MG+NFS FFRLHNGSHPPSP P   +P LGDL ESC A V++YL+PVEIC L ++N+AFR
Sbjct: 1   MGLNFSLFFRLHNGSHPPSPSP---FPGLGDLPESCAADVLKYLTPVEICVLGKMNRAFR 60

Query: 61  AASWADCVWESKLPLNYRFLVRRVIGDFAPIMSKREIYTRLCHQNPLDGGNKKFWLDKYS 120
           AASWAD VW+SKLP NY  LV+R+IGD A IMSKREIYTRLC  NPLDGGNK  WLDKYS
Sbjct: 61  AASWADFVWDSKLPSNYSVLVQRLIGDVALIMSKREIYTRLCRLNPLDGGNKNVWLDKYS 120

Query: 121 GGVCLSISSMDLRITGIDDRRYWNRISTEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTY 180
           GG+CLSISSMDLRITGIDDRRYWNRISTEESRF+ VAYLQQ WW EVGGEV+FP PPG+Y
Sbjct: 121 GGICLSISSMDLRITGIDDRRYWNRISTEESRFHTVAYLQQIWWFEVGGEVEFPFPPGSY 180

Query: 181 SLYFRLQLGQTSWRFGRKIHNLEHVHGWNIKPTQFQLWTSDGQHAKTERYLNEAGKWTLH 240
           SLYFRLQLG+TS RFGR+I+NLEHVHGWNIKP QFQLWTSDGQHAKT+ YL EAGKWTLH
Sbjct: 181 SLYFRLQLGRTSKRFGRRIYNLEHVHGWNIKPVQFQLWTSDGQHAKTQCYLEEAGKWTLH 240

Query: 241 HAGNFHVDARNESIRIKFSMTQIDCTHTKGGLCLDSVLICPVGYDQRSKCR 292
           HAGNF+VDARNES RIKFSMTQIDCTHTKGGLCLDSVLI PV Y QRS  R
Sbjct: 241 HAGNFNVDARNESTRIKFSMTQIDCTHTKGGLCLDSVLIFPVEYKQRSSQR 288

[Close]
BLAST of CmoCh06G007260 vs. TrEMBL
Match: B9GKN4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s08810g PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 4.0e-107
Identity = 188/289 (65.05%), Postives = 218/289 (75.43%), Query Frame = 1 

Query: 1   MGVNFSAFFRLHN-----GSH--PPSPPPPPPYPCLGDLSESCVAAVMEYLSPVEICKLA 60
           MG N S+ F   N     GS    PSPPPP   P LGDL ESCVA V+EYL+P EIC+LA
Sbjct: 1   MGANLSSSFADPNVYSLVGSLCLQPSPPPPRIKPGLGDLPESCVALVLEYLNPSEICRLA 60

Query: 61  RLNQAFRAASWADCVWESKLPLNYRFLVRRVIGD-FAPIMSKREIYTRLCHQNPLDGGNK 120
           +LN+AFR ASWAD VWESKLP+NY  L+ RV GD     + KRE+YTRLC  N  D G K
Sbjct: 61  KLNRAFRGASWADFVWESKLPVNYEDLIERVFGDGLEDKLCKREVYTRLCRANTFDDGTK 120

Query: 121 KFWLDKYSGGVCLSISSMDLRITGIDDRRYWNRISTEESRFNIVAYLQQTWWLEVGGEVD 180
           K WLDK +GGVCLSI+S  L ITGIDDRRYWN I TEES FN VAYLQQ WW EV G+ +
Sbjct: 121 KAWLDKRTGGVCLSIASKGLAITGIDDRRYWNHIPTEESSFNSVAYLQQIWWFEVDGQFE 180

Query: 181 FPLPPGTYSLYFRLQLGQTSWRFGRKIHNLEHVHGWNIKPTQFQLWTSDGQHAKTERYLN 240
           FP P GTYSL+FRLQLG+ + RFGR+I N EHVHGW+IKP QFQLWTSDGQ+A ++ +L 
Sbjct: 181 FPFPAGTYSLFFRLQLGRAAKRFGRRICNTEHVHGWDIKPVQFQLWTSDGQYASSQCFLE 240

Query: 241 EAGKWTLHHAGNFHVDARNESIRIKFSMTQIDCTHTKGGLCLDSVLICP 282
           + GKW L+HAG+F VD  N S ++KFSMTQIDCTHTKGGLCLDS+L+ P
Sbjct: 241 DPGKWNLYHAGDFVVDGTNASTKLKFSMTQIDCTHTKGGLCLDSILVYP 289

[Close]
BLAST of CmoCh06G007260 vs. TrEMBL
Match: B9RC28_RICCO (ATPP2-A13, putative OS=Ricinus communis GN=RCOM_1684260 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 7.6e-106
Identity = 185/299 (61.87%), Postives = 218/299 (72.91%), Query Frame = 1 

Query: 1   MGVNFSAFFRLHNGSHPPSPPPP-------PPYPCLGDLSESCVAAVMEYLSPVEICKLA 60
           MG N S+ F   N       P P       P +PCLGDL ESCVA ++EYL P EI K A
Sbjct: 1   MGANLSSIFMDPNSLSLYCGPLPSSFQSSNPSHPCLGDLPESCVALILEYLDPQEIFKFA 60

Query: 61  RLNQAFRAASWADCVWESKLPLNYRFLVRRVIG---DFAPIMSKREIYTRLCHQNPLDGG 120
           RLN+AFR ASWAD VWESKLP NY  L+ RV G   DF   ++KREIYT LC  N  DGG
Sbjct: 61  RLNRAFRGASWADFVWESKLPSNYVSLLERVFGGDDDFPRKLNKREIYTILCRANTFDGG 120

Query: 121 NKKFWLDKYSGGVCLSISSMDLRITGIDDRRYWNRISTEESRFNIVAYLQQTWWLEVGGE 180
            KK WLDK +GGVCLSI S  L ITGIDDRRYWN I TEESRF  VAYLQQ WWLEV G+
Sbjct: 121 TKKVWLDKITGGVCLSICSKGLSITGIDDRRYWNHIPTEESRFQSVAYLQQIWWLEVDGQ 180

Query: 181 VDFPLPPGTYSLYFRLQLGQTSWRFGRKIHNLEHVHGWNIKPTQFQLWTSDGQHAKTERY 240
            +FP   GTYSL+FRLQLG+ + +FGR++ N EHVHGW+IKP +FQLWTSDGQ+A ++R+
Sbjct: 181 FEFPFLAGTYSLFFRLQLGRAAKKFGRRVCNTEHVHGWDIKPVRFQLWTSDGQYASSQRF 240

Query: 241 LNEAGKWTLHHAGNFHVDARNESIRIKFSMTQIDCTHTKGGLCLDSVLICPVGYDQRSK 290
           LN+ G W L+HAG+F VD+ N S+ +KFSMTQIDCTHTKGGLCLDSV++ P  + +R K
Sbjct: 241 LNDTGNWNLYHAGDFVVDSSNSSMNLKFSMTQIDCTHTKGGLCLDSVVVYPCKFKERLK 299

[Close]
BLAST of CmoCh06G007260 vs. TrEMBL
Match: B9GW68_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTR_0003s12190g PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 9.9e-106
Identity = 179/261 (68.58%), Postives = 205/261 (78.54%), Query Frame = 1 

Query: 22  PPPPYPCLGDLSESCVAAVMEYLSPVEICKLARLNQAFRAASWADCVWESKLPLNYRFLV 81
           PP   P LGDL E CVA ++EYL+P EICKLARLN+AFR ASWAD VWESKLP+NY  L+
Sbjct: 28  PPATKPSLGDLPEGCVALILEYLNPQEICKLARLNRAFRGASWADFVWESKLPVNYEDLI 87

Query: 82  RRVIGD-FAPIMSKREIYTRLCHQNPLDGGNKKFWLDKYSGGVCLSISSMDLRITGIDDR 141
            RV+GD     + KREIYTRLC  N  D G KK WLDK + GVCLSI+S  L ITGIDDR
Sbjct: 88  GRVLGDDLKDKLCKREIYTRLCRANAFDDGTKKAWLDKRTRGVCLSIASKGLAITGIDDR 147

Query: 142 RYWNRISTEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTYSLYFRLQLGQTSWRFGRKIH 201
           RYWN I TEESRFN VAYLQQ WW EV G+ +FP P GTYSL+FRLQLG+ + RFGR+I 
Sbjct: 148 RYWNHIPTEESRFNSVAYLQQIWWFEVDGQFEFPFPAGTYSLFFRLQLGRAAKRFGRRIC 207

Query: 202 NLEHVHGWNIKPTQFQLWTSDGQHAKTERYLNEAGKWTLHHAGNFHVDARNESIRIKFSM 261
           N EHVHGW IKP QFQ+WTSDGQHA ++ +LN+ GKW L+HAG+F VD  N S ++KFSM
Sbjct: 208 NTEHVHGWEIKPVQFQIWTSDGQHASSQCFLNDPGKWNLYHAGDFVVDGSNASTKLKFSM 267

Query: 262 TQIDCTHTKGGLCLDSVLICP 282
           TQIDCTHTKGGLCLDSVL+ P
Sbjct: 268 TQIDCTHTKGGLCLDSVLVYP 288

[Close]
BLAST of CmoCh06G007260 vs. TrEMBL
Match: V4VLX1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021489mg PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.2e-105
Identity = 187/289 (64.71%), Postives = 210/289 (72.66%), Query Frame = 1 

Query: 1   MGVNFSAFFRLHNGSHPPSPPPPPPYPCLGDLSESCVAAVMEYLSPVEICKLARLNQAFR 60
           MG NFSA FR  NG+ P S    P    LGDL ESCVA ++  L P EICKLARLN+AFR
Sbjct: 1   MGANFSALFRDPNGATPGSAAAKPG---LGDLPESCVALIIGSLDPTEICKLARLNRAFR 60

Query: 61  AASWADCVWESKLPLNYRFLVRRVIGDFAPIMSKREIYTRLCHQNPLDGGNKKFWLDKYS 120
            AS AD VWESKLP NYR L+  V GD    + KREIY RLC  N  DGG KK WLDK +
Sbjct: 61  GASLADFVWESKLPPNYRTLIEEVFGDLKKDLGKREIYARLCRMNSFDGGTKKVWLDKST 120

Query: 121 GGVCLSISSMDLRITGIDDRRYWNRISTEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTY 180
           GGVCLSIS+  L ITGIDDRRYWN I TEESRF  VAYLQQ WW EV GE++FP P GTY
Sbjct: 121 GGVCLSISAKGLAITGIDDRRYWNHIPTEESRFTSVAYLQQIWWFEVDGELEFPFPAGTY 180

Query: 181 SLYFRLQLGQTSWRFGRKIHNLEHVHGWNIKPTQFQLWTSDGQHAKTERYLNEAGKWTLH 240
           S++ RLQLG+ S RFGR+I + EHVHGW+ KP QFQLWTSDGQHA ++  LNE GKW  +
Sbjct: 181 SIFMRLQLGRASKRFGRRICSTEHVHGWDRKPVQFQLWTSDGQHASSQCILNEPGKWVQY 240

Query: 241 HAGNFHVDARNESIRIKFSMTQIDCTHTKGGLCLDSVLICPVGYDQRSK 290
           H G+F V+  N   +IKFSM QIDCTHTKGGLCLDSVLICP    +R K
Sbjct: 241 HIGDFIVENGNLLTKIKFSMMQIDCTHTKGGLCLDSVLICPSKCTERLK 286

[Close]
BLAST of CmoCh06G007260 vs. TAIR10
Match: AT1G12710.1 (AT1G12710.1 phloem protein 2-A12)

HSP 1 Score: 338.6 bits (867), Expect = 3.9e-93
Identity = 151/256 (58.98%), Postives = 191/256 (74.61%), Query Frame = 1 

Query: 27  PCLGDLSESCVAAVMEYLSPVEICKLARLNQAFRAASWADCVWESKLPLNYRFLVRRVIG 86
           P LGDL E+CVA ++E L PVEIC+ ++LN+AFR ASWADCVWESKLP NYR ++ +++G
Sbjct: 26  PGLGDLPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKILG 85

Query: 87  DFAPIMSKREIYTRLCHQNPLDGGNKKFWLDKYSGGVCLSISSMDLRITGIDDRRYWNRI 146
            F   + KR +Y  L   N  D   KK W+DK + GVCLSIS+  L ITGIDDRRYW+ I
Sbjct: 86  GFPENLQKRHLYAFLSRINSFDDATKKVWIDKRTSGVCLSISAKGLSITGIDDRRYWSHI 145

Query: 147 STEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTYSLYFRLQLGQTSWRFGRKIHNLEHVH 206
            T+ESRF+ VAYLQQ WW EV GE+DFP P GTYS++FRLQLG++   FGR++ N E VH
Sbjct: 146 PTDESRFSSVAYLQQIWWFEVDGEIDFPFPVGTYSIFFRLQLGRSGKWFGRRVCNTEQVH 205

Query: 207 GWNIKPTQFQLWTSDGQHAKTERYLNEAGKWTLHHAGNFHV-DARNESIRIKFSMTQIDC 266
           GW+IKP +FQLWT DGQ++ ++  L E G W  +HAG+  V ++   S +IKFSMTQIDC
Sbjct: 206 GWDIKPVRFQLWTEDGQYSSSQCMLTERGNWIHYHAGDVVVRESNRSSTKIKFSMTQIDC 265

Query: 267 THTKGGLCLDSVLICP 282
           THTKGGL LDSV++ P
Sbjct: 266 THTKGGLSLDSVVVYP 281

[Close]
BLAST of CmoCh06G007260 vs. TAIR10
Match: AT1G63090.1 (AT1G63090.1 phloem protein 2-A11)

HSP 1 Score: 334.0 bits (855), Expect = 9.5e-92
Identity = 148/256 (57.81%), Postives = 193/256 (75.39%), Query Frame = 1 

Query: 27  PCLGDLSESCVAAVMEYLSPVEICKLARLNQAFRAASWADCVWESKLPLNYRFLVRRVIG 86
           P LGDL ESCVA +++ L PVEIC+ ++LN AF  ASWAD VWESKLP +Y+ ++ +++G
Sbjct: 24  PGLGDLPESCVALILQNLDPVEICRFSKLNTAFHGASWADFVWESKLPPDYKLILEKILG 83

Query: 87  DFAPIMSKREIYTRLCHQNPLDGGNKKFWLDKYSGGVCLSISSMDLRITGIDDRRYWNRI 146
            F   + KR+I+T L   N  D GNKK W+DK +GG+CL  S+  L ITGIDDRRYW+ I
Sbjct: 84  SFPDNLRKRDIFTFLSRVNSFDEGNKKAWVDKRTGGLCLCTSAKGLSITGIDDRRYWSHI 143

Query: 147 STEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTYSLYFRLQLGQTSWRFGRKIHNLEHVH 206
            +++SRF  VAY+QQ WW +V GE+DFP P GTYS+YFRLQLG+   RFG K+ + E VH
Sbjct: 144 PSDDSRFASVAYVQQIWWFQVDGEIDFPFPAGTYSVYFRLQLGKPGKRFGWKVVDTEQVH 203

Query: 207 GWNIKPTQFQLWTSDGQHAKTERYLNEAGKWTLHHAGNFHV-DARNESIRIKFSMTQIDC 266
           GWNIKP +FQL T DGQH+ ++  L EAG W+ +HAG+F V  +++ S +IKFSMTQIDC
Sbjct: 204 GWNIKPVRFQLSTEDGQHSSSQCMLTEAGNWSHYHAGDFVVGKSKSSSTKIKFSMTQIDC 263

Query: 267 THTKGGLCLDSVLICP 282
           THTKGGLC+DSV++ P
Sbjct: 264 THTKGGLCVDSVVVYP 279

[Close]
BLAST of CmoCh06G007260 vs. TAIR10
Match: AT5G52120.1 (AT5G52120.1 phloem protein 2-A14)

HSP 1 Score: 316.2 bits (809), Expect = 2.1e-86
Identity = 145/268 (54.10%), Postives = 188/268 (70.15%), Query Frame = 1 

Query: 29  LGDLSESCVAAVMEYLSPVEICKLARLNQAFRAASWADCVWESKLPLNYRFLVRRVIGDF 88
           L D+ E+C+ A+  Y+ P EIC LAR+N++F  AS +D VWE KLP NY+FLVRR++ D 
Sbjct: 21  LEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILEDQ 80

Query: 89  AP-------IMSKREIYTRLCHQNPLDGGNKKFWLDKYSGGVCLSISSMDLRITGIDDRR 148
                    I  K+EIY RLC  N  D G K+ WLDK SG V L+IS   ++ITGIDDRR
Sbjct: 81  QQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKRSGKVFLAISPKAMKITGIDDRR 140

Query: 149 YWNRISTEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTYSLYFRLQLGQTSWRFGRKIHN 208
           YW  IS++ESRF  + YL+Q WWLE  G++ F   PG YSL F++QLG+   + GRK  +
Sbjct: 141 YWEHISSDESRFGSITYLRQIWWLEAVGKIRFEFAPGKYSLLFKIQLGKPIRKCGRKTCS 200

Query: 209 LEHVHGWNIKPTQFQLWTSDGQHAKTERYLNEAGKWTLHHAGNFHVDARNESIRIKFSMT 268
           L+ VHGW+IKP +FQL TSDGQ A +ER+L+E+G+W  HHAG+F V+ +N  + +KFSM 
Sbjct: 201 LDQVHGWDIKPVRFQLSTSDGQCAMSERHLDESGRWVYHHAGDFVVENQNSPVWVKFSML 260

Query: 269 QIDCTHTKGGLCLDSVLICPVGYDQRSK 290
           QIDCTHTKGGLCLD V+ICP  Y  + K
Sbjct: 261 QIDCTHTKGGLCLDCVIICPFEYRGKYK 288

[Close]
BLAST of CmoCh06G007260 vs. TAIR10
Match: AT3G61060.2 (AT3G61060.2 phloem protein 2-A13)

HSP 1 Score: 309.3 bits (791), Expect = 2.5e-84
Identity = 148/256 (57.81%), Postives = 182/256 (71.09%), Query Frame = 1 

Query: 29  LGDLSESCVAAVMEYLSPVEICKLARLNQAFRAASWADCVWESKLPLNYRFLVRRVIGDF 88
           L DL E+CVA +M  L P EIC+LARLN+ FR AS AD +WESKLP NYR +  +V  + 
Sbjct: 25  LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEI 84

Query: 89  API-MSKREIYTRLCHQNPLDGGNKK-FWLDKYSGGVCLSISSMDLRITGIDDRRYWNRI 148
               + K+++Y +L   N  D G K+  W+DK +G +CLSISS  LRITGIDDRRYW+ I
Sbjct: 85  TLTKLIKKDLYAKLSQPNLFDDGTKQELWIDKNTGRLCLSISSKALRITGIDDRRYWSHI 144

Query: 149 STEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTYSLYFRLQLGQTSWRFGRKIHNLEHVH 208
            T+ESRF   AY+QQ WW EVGGE +   P GTYSL+FR+QLG+TS R GR+I N EH+H
Sbjct: 145 PTDESRFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIH 204

Query: 209 GWNIKPTQFQLWTSDGQHAKTERYL-NEAGKWTLHHAGNFHVDARNESIRIKFSMTQIDC 268
           GW+IKP +FQL TSD Q A +  YL N  G W+ +H G+F V   + S  IKFSMTQIDC
Sbjct: 205 GWDIKPVRFQLATSDNQQAVSLCYLNNNPGSWSHYHVGDFKVTNPDVSTGIKFSMTQIDC 264

Query: 269 THTKGGLCLDSVLICP 282
           THTKGGLC+DSVLI P
Sbjct: 265 THTKGGLCIDSVLILP 280

[Close]
BLAST of CmoCh06G007260 vs. TAIR10
Match: AT3G53000.1 (AT3G53000.1 phloem protein 2-A15)

HSP 1 Score: 285.8 bits (730), Expect = 3.0e-77
Identity = 138/268 (51.49%), Postives = 179/268 (66.79%), Query Frame = 1 

Query: 27  PCLGDLSESCVAAVMEYLSPVEICKLARLNQAFRAASWADCVWESKLPLNYRFLVRRVIG 86
           P LGD+ ESCVA V  YL+P EIC LA LN++FR A+ +D VWE KLP NY+ L+  +  
Sbjct: 19  PGLGDIPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLDLLPP 78

Query: 87  DFAPIMSKREIYTRLCHQNPLDGGNKKFWLDKYSGGVCLSISSMDLRITGIDDRRYWNRI 146
           +    +SK++I+  L    P D  NK+ W+D+ +G VC++IS+  + ITGI+DRRYWN I
Sbjct: 79  ERYHSLSKKDIFAVLSRPIPFDDDNKEVWIDRVTGRVCMAISARGMSITGIEDRRYWNWI 138

Query: 147 STEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTYSLYFRLQLGQTSWRFGRKIHNLEHVH 206
            TEESRF++VAYLQQ WW EV G V F LPPG YSL FR+ LG+ + R GR++ + E  H
Sbjct: 139 PTEESRFHVVAYLQQIWWFEVDGTVRFHLPPGVYSLSFRIHLGRFTKRLGRRVCHFELTH 198

Query: 207 GWNIKPTQFQLWTSDGQHAKTERYL-----NEA------GKWTLHHAGNFHVDARNESIR 266
           GW++KP +F L TSDGQ A  E YL     NEA      G W  +  G F V+    S  
Sbjct: 199 GWDLKPVRFSLSTSDGQEASCEYYLDDVERNEALGKHKRGYWIEYRVGEFIVNGSEPSTE 258

Query: 267 IKFSMTQIDCTHTKGGLCLDSVLICPVG 284
           I++SM QIDCTH+KGGLC+DSV I P+G
Sbjct: 259 IQWSMKQIDCTHSKGGLCVDSVFINPIG 286

[Close]
BLAST of CmoCh06G007260 vs. NCBI nr
Match: gi|449461100|ref|XP_004148281.1| (PREDICTED: F-box protein PP2-A11 [Cucumis sativus])

HSP 1 Score: 510.0 bits (1312), Expect = 2.8e-141
Identity = 236/291 (81.10%), Postives = 256/291 (87.97%), Query Frame = 1 

Query: 1   MGVNFSAFFRLHNGSHPPSPPPPPPYPCLGDLSESCVAAVMEYLSPVEICKLARLNQAFR 60
           MG+NFS FFRLHNGSHPPSP P   +P LGDL ESC A V++YL+PVEIC L ++N+AFR
Sbjct: 1   MGLNFSLFFRLHNGSHPPSPSP---FPGLGDLPESCAADVLKYLTPVEICVLGKMNRAFR 60

Query: 61  AASWADCVWESKLPLNYRFLVRRVIGDFAPIMSKREIYTRLCHQNPLDGGNKKFWLDKYS 120
           AASWAD VW+SKLP NY  LV+R+IGD A IMSKREIYTRLC  NPLDGGNK  WLDKYS
Sbjct: 61  AASWADFVWDSKLPSNYSVLVQRLIGDVALIMSKREIYTRLCRLNPLDGGNKNVWLDKYS 120

Query: 121 GGVCLSISSMDLRITGIDDRRYWNRISTEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTY 180
           GG+CLSISSMDLRITGIDDRRYWNRISTEESRF+ VAYLQQ WW EVGGEV+FP PPG+Y
Sbjct: 121 GGICLSISSMDLRITGIDDRRYWNRISTEESRFHTVAYLQQIWWFEVGGEVEFPFPPGSY 180

Query: 181 SLYFRLQLGQTSWRFGRKIHNLEHVHGWNIKPTQFQLWTSDGQHAKTERYLNEAGKWTLH 240
           SLYFRLQLG+TS RFGR+I+NLEHVHGWNIKP QFQLWTSDGQHAKT+ YL EAGKWTLH
Sbjct: 181 SLYFRLQLGRTSKRFGRRIYNLEHVHGWNIKPVQFQLWTSDGQHAKTQCYLEEAGKWTLH 240

Query: 241 HAGNFHVDARNESIRIKFSMTQIDCTHTKGGLCLDSVLICPVGYDQRSKCR 292
           HAGNF+VDARNES RIKFSMTQIDCTHTKGGLCLDSVLI PV Y QRS  R
Sbjct: 241 HAGNFNVDARNESTRIKFSMTQIDCTHTKGGLCLDSVLIFPVEYKQRSSQR 288

[Close]
BLAST of CmoCh06G007260 vs. NCBI nr
Match: gi|659096222|ref|XP_008448978.1| (PREDICTED: F-box protein PP2-A11-like [Cucumis melo])

HSP 1 Score: 499.6 bits (1285), Expect = 3.7e-138
Identity = 231/291 (79.38%), Postives = 252/291 (86.60%), Query Frame = 1 

Query: 1   MGVNFSAFFRLHNGSHPPSPPPPPPYPCLGDLSESCVAAVMEYLSPVEICKLARLNQAFR 60
           MG+NFS FFRLHNGS PPS  P   +P LGDL ESC A V++YL+PVEIC L ++N+AFR
Sbjct: 1   MGLNFSVFFRLHNGSQPPSSSP---FPGLGDLPESCAADVLKYLTPVEICILGKMNRAFR 60

Query: 61  AASWADCVWESKLPLNYRFLVRRVIGDFAPIMSKREIYTRLCHQNPLDGGNKKFWLDKYS 120
            ASWAD VW+SKLP NYR LV+R+IGD   +M KREIYTRLC  N LDGGNK  WLDKYS
Sbjct: 61  GASWADFVWDSKLPSNYRVLVQRLIGDVGLVMCKREIYTRLCQLNQLDGGNKNVWLDKYS 120

Query: 121 GGVCLSISSMDLRITGIDDRRYWNRISTEESRFNIVAYLQQTWWLEVGGEVDFPLPPGTY 180
           GG+CLSISSMDLRITGIDDRRYWNRISTEESRF  VAYLQQ WW EVGGEV+FP PPGTY
Sbjct: 121 GGICLSISSMDLRITGIDDRRYWNRISTEESRFQTVAYLQQIWWFEVGGEVEFPFPPGTY 180

Query: 181 SLYFRLQLGQTSWRFGRKIHNLEHVHGWNIKPTQFQLWTSDGQHAKTERYLNEAGKWTLH 240
           SLYFRLQLG+TS RFGR+I+NLEHVHGWNIKP QFQLWTSDGQHAKT+ YL+EAGKWTLH
Sbjct: 181 SLYFRLQLGRTSKRFGRRIYNLEHVHGWNIKPVQFQLWTSDGQHAKTQCYLDEAGKWTLH 240

Query: 241 HAGNFHVDARNESIRIKFSMTQIDCTHTKGGLCLDSVLICPVGYDQRSKCR 292
           HAGNF+VDARNES RIKFSMTQIDCTHTKGGLCLDSVLI PV Y QRS+ R
Sbjct: 241 HAGNFNVDARNESTRIKFSMTQIDCTHTKGGLCLDSVLIFPVEYKQRSQRR 288

[Close]
BLAST of CmoCh06G007260 vs. NCBI nr
Match: gi|743852175|ref|XP_011029184.1| (PREDICTED: F-box protein PP2-A12 isoform X1 [Populus euphratica])

HSP 1 Score: 399.4 bits (1025), Expect = 5.2e-108
Identity = 189/289 (65.40%), Postives = 218/289 (75.43%), Query Frame = 1 

Query: 1   MGVNFSAFFRLHN-----GSH--PPSPPPPPPYPCLGDLSESCVAAVMEYLSPVEICKLA 60
           MG N S+ F   N     GS    PSPPPP   P LGDL ESCVA V+EYL+P EIC+LA
Sbjct: 1   MGANLSSSFADPNVYSLVGSLCLQPSPPPPRIKPGLGDLPESCVALVLEYLNPSEICRLA 60

Query: 61  RLNQAFRAASWADCVWESKLPLNYRFLVRRVIGD-FAPIMSKREIYTRLCHQNPLDGGNK 120
           +LN+AFR ASWAD VWESKLP+NY  L+ RV GD     + KRE+YTRLC  N  D G K
Sbjct: 61  KLNRAFRGASWADFVWESKLPVNYEDLIERVFGDGLEDKLCKREVYTRLCRANTFDDGTK 120

Query: 121 KFWLDKYSGGVCLSISSMDLRITGIDDRRYWNRISTEESRFNIVAYLQQTWWLEVGGEVD 180
           K WLDK +GGVCLSI+S  L ITGIDDRRYWN I TEES FN VAYLQQ WW EV G+ +
Sbjct: 121 KAWLDKRTGGVCLSIASKGLAITGIDDRRYWNHIPTEESSFNSVAYLQQIWWFEVDGQFE 180

Query: 181 FPLPPGTYSLYFRLQLGQTSWRFGRKIHNLEHVHGWNIKPTQFQLWTSDGQHAKTERYLN 240
           FP P GTYSL+FRLQLG+ + RFGR+I N EHVHGW IKP QFQ+WTSDGQHA ++ +LN
Sbjct: 181 FPFPAGTYSLFFRLQLGRAAKRFGRRICNTEHVHGWEIKPVQFQIWTSDGQHASSQCFLN 240

Query: 241 EAGKWTLHHAGNFHVDARNESIRIKFSMTQIDCTHTKGGLCLDSVLICP 282
           + GKW L+HAG+F VD  N S ++KFSMTQIDCTHTKGGLCLDS+L+ P
Sbjct: 241 DPGKWNLYHAGDFVVDGANASTKLKFSMTQIDCTHTKGGLCLDSILVYP 289

[Close]
BLAST of CmoCh06G007260 vs. NCBI nr
Match: gi|224053967|ref|XP_002298062.1| (hypothetical protein POPTR_0001s08810g [Populus trichocarpa])

HSP 1 Score: 396.0 bits (1016), Expect = 5.8e-107
Identity = 188/289 (65.05%), Postives = 218/289 (75.43%), Query Frame = 1 

Query: 1   MGVNFSAFFRLHN-----GSH--PPSPPPPPPYPCLGDLSESCVAAVMEYLSPVEICKLA 60
           MG N S+ F   N     GS    PSPPPP   P LGDL ESCVA V+EYL+P EIC+LA
Sbjct: 1   MGANLSSSFADPNVYSLVGSLCLQPSPPPPRIKPGLGDLPESCVALVLEYLNPSEICRLA 60

Query: 61  RLNQAFRAASWADCVWESKLPLNYRFLVRRVIGD-FAPIMSKREIYTRLCHQNPLDGGNK 120
           +LN+AFR ASWAD VWESKLP+NY  L+ RV GD     + KRE+YTRLC  N  D G K
Sbjct: 61  KLNRAFRGASWADFVWESKLPVNYEDLIERVFGDGLEDKLCKREVYTRLCRANTFDDGTK 120

Query: 121 KFWLDKYSGGVCLSISSMDLRITGIDDRRYWNRISTEESRFNIVAYLQQTWWLEVGGEVD 180
           K WLDK +GGVCLSI+S  L ITGIDDRRYWN I TEES FN VAYLQQ WW EV G+ +
Sbjct: 121 KAWLDKRTGGVCLSIASKGLAITGIDDRRYWNHIPTEESSFNSVAYLQQIWWFEVDGQFE 180

Query: 181 FPLPPGTYSLYFRLQLGQTSWRFGRKIHNLEHVHGWNIKPTQFQLWTSDGQHAKTERYLN 240
           FP P GTYSL+FRLQLG+ + RFGR+I N EHVHGW+IKP QFQLWTSDGQ+A ++ +L 
Sbjct: 181 FPFPAGTYSLFFRLQLGRAAKRFGRRICNTEHVHGWDIKPVQFQLWTSDGQYASSQCFLE 240

Query: 241 EAGKWTLHHAGNFHVDARNESIRIKFSMTQIDCTHTKGGLCLDSVLICP 282
           + GKW L+HAG+F VD  N S ++KFSMTQIDCTHTKGGLCLDS+L+ P
Sbjct: 241 DPGKWNLYHAGDFVVDGTNASTKLKFSMTQIDCTHTKGGLCLDSILVYP 289

[Close]
BLAST of CmoCh06G007260 vs. NCBI nr
Match: gi|255537291|ref|XP_002509712.1| (PREDICTED: F-box protein PP2-A12 [Ricinus communis])

HSP 1 Score: 391.7 bits (1005), Expect = 1.1e-105
Identity = 185/299 (61.87%), Postives = 218/299 (72.91%), Query Frame = 1 

Query: 1   MGVNFSAFFRLHNGSHPPSPPPP-------PPYPCLGDLSESCVAAVMEYLSPVEICKLA 60
           MG N S+ F   N       P P       P +PCLGDL ESCVA ++EYL P EI K A
Sbjct: 1   MGANLSSIFMDPNSLSLYCGPLPSSFQSSNPSHPCLGDLPESCVALILEYLDPQEIFKFA 60

Query: 61  RLNQAFRAASWADCVWESKLPLNYRFLVRRVIG---DFAPIMSKREIYTRLCHQNPLDGG 120
           RLN+AFR ASWAD VWESKLP NY  L+ RV G   DF   ++KREIYT LC  N  DGG
Sbjct: 61  RLNRAFRGASWADFVWESKLPSNYVSLLERVFGGDDDFPRKLNKREIYTILCRANTFDGG 120

Query: 121 NKKFWLDKYSGGVCLSISSMDLRITGIDDRRYWNRISTEESRFNIVAYLQQTWWLEVGGE 180
            KK WLDK +GGVCLSI S  L ITGIDDRRYWN I TEESRF  VAYLQQ WWLEV G+
Sbjct: 121 TKKVWLDKITGGVCLSICSKGLSITGIDDRRYWNHIPTEESRFQSVAYLQQIWWLEVDGQ 180

Query: 181 VDFPLPPGTYSLYFRLQLGQTSWRFGRKIHNLEHVHGWNIKPTQFQLWTSDGQHAKTERY 240
            +FP   GTYSL+FRLQLG+ + +FGR++ N EHVHGW+IKP +FQLWTSDGQ+A ++R+
Sbjct: 181 FEFPFLAGTYSLFFRLQLGRAAKKFGRRVCNTEHVHGWDIKPVRFQLWTSDGQYASSQRF 240

Query: 241 LNEAGKWTLHHAGNFHVDARNESIRIKFSMTQIDCTHTKGGLCLDSVLICPVGYDQRSK 290
           LN+ G W L+HAG+F VD+ N S+ +KFSMTQIDCTHTKGGLCLDSV++ P  + +R K
Sbjct: 241 LNDTGNWNLYHAGDFVVDSSNSSMNLKFSMTQIDCTHTKGGLCLDSVVVYPCKFKERLK 299

The following BLAST results are available for this feature:
BLAST of CmoCh06G007260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
P2A12_ARATH6.9e-9258.98F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1[more]
P2A11_ARATH1.7e-9057.81F-box protein PP2-A11 OS=Arabidopsis thaliana GN=PP2A11 PE=1 SV=1[more]
P2A14_ARATH3.7e-8554.10F-box protein PP2-A14 OS=Arabidopsis thaliana GN=PP2A14 PE=1 SV=1[more]
P2A13_ARATH1.8e-8458.04F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1[more]
P2A15_ARATH5.3e-7651.49F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1[more]
BLAST of CmoCh06G007260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4L6_CUCSA1.9e-14181.10Uncharacterized protein OS=Cucumis sativus GN=Csa_3G043900 PE=4 SV=1[more]
B9GKN4_POPTR4.0e-10765.05Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s08810g PE=4 SV=1[more]
B9RC28_RICCO7.6e-10661.87ATPP2-A13, putative OS=Ricinus communis GN=RCOM_1684260 PE=4 SV=1[more]
B9GW68_POPTR9.9e-10668.58F-box family protein OS=Populus trichocarpa GN=POPTR_0003s12190g PE=4 SV=1[more]
V4VLX1_9ROSI2.2e-10564.71Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021489mg PE=4 SV=1[more]
BLAST of CmoCh06G007260 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G12710.13.9e-9358.98 phloem protein 2-A12[more]
AT1G63090.19.5e-9257.81 phloem protein 2-A11[more]
AT5G52120.12.1e-8654.10 phloem protein 2-A14[more]
AT3G61060.22.5e-8457.81 phloem protein 2-A13[more]
AT3G53000.13.0e-7751.49 phloem protein 2-A15[more]
BLAST of CmoCh06G007260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461100|ref|XP_004148281.1|2.8e-14181.10PREDICTED: F-box protein PP2-A11 [Cucumis sativus][more]
gi|659096222|ref|XP_008448978.1|3.7e-13879.38PREDICTED: F-box protein PP2-A11-like [Cucumis melo][more]
gi|743852175|ref|XP_011029184.1|5.2e-10865.40PREDICTED: F-box protein PP2-A12 isoform X1 [Populus euphratica][more]
gi|224053967|ref|XP_002298062.1|5.8e-10765.05hypothetical protein POPTR_0001s08810g [Populus trichocarpa][more]
gi|255537291|ref|XP_002509712.1|1.1e-10561.87PREDICTED: F-box protein PP2-A12 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR025886PP2-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0042967 acyl-carrier-protein biosynthetic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0008654 phospholipid biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity
molecular_function GO:0047184 1-acylglycerophosphocholine O-acyltransferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G007260.1CmoCh06G007260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainunknownSSF81383F-box domaincoord: 18..103
score: 1.55
IPR025886Phloem protein 2-likePFAMPF14299PP2coord: 123..281
score: 4.9
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 23..71
score: 4.
NoneNo IPR availablePANTHERPTHR31960FAMILY NOT NAMEDcoord: 2..287
score: 1.9E

Synteny