CmoCh06G006080 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAAAAGAAAAAAAGAAAGTCGATCGTTTCGTCTCTCCACAGGAAAATAAAATTTCTTCTATCCCTCTGGTCAAAGGGACTCCGATCACCGGATAGATGTTTCCGGTGGCCGGAGATTTCGTCTCCTCAAATCCTTGAACTTCGTGCTGCTCATCACCGAAATCAGAGTGATTATCCTGCAATTTCAGTATTCTAATGGATTCTGAGGACGATGAGGTCTCTACGTCTGAGAGGACGACGAAGAGGGGTTATCTAGCTGTAACTATGCGATGGTGTGCCGTGCTTTTGATTCCAGTAGTTTCATTCTTTCTTGTGACTGTATCTTTGAGTTTAGTTGCTGTTTTTGTCGCCAATTCGTCAATTACTAGTCCAATTTCTTTGCGTTCTCAGTGCAAGATTGTTTCCAGCAGTAAGTTTTTTTTTTTCTTATGCACCTTCTCTTTGAGTTCGTTCCGAAATCGAGTTTTATATTTTTGGTTTTATAAGTGATAAAGACGCGCTGCTGAATACTGAGTTTGAGACTATCTGATATTGAAATTGTAGGTTCAATCATCTATGTGTTTATAGTCCCAGGATGATTTGTAACTGTAACAAGGCTGATCTAGTTATCTTCATGTGGACCTAGTGACTACGAATAGAATAATCCTTTCTTTTGTAAACAACGATCTCGTTACTGTGTTTGCGGATGGAGTAATATGTGTATAAACTTAGCTTAGAATTGACTCCATTTTCTGGATAGGCTAAAAACTAAGTGAGATATCAATGGCCACATATCAGGTACGACAGTATTATGAAAGCACTTCATTCTCTTCTTGATTAGGGAAACTATTAGAAATTGCTCAGAGTTAAGAATTTTGGTTCATTATAAATTGGGGGTTTAAGTGCCATCAGCTCCCATTTGTTAGTATTTCGATTAATGCTAAACCCTGTACCCAATGCTTTCTTTTCTGAGTGATTTTTTCTTTTTGCAGGTGTGGACCTTAGGTCATCCAAGGTTTGTGAACTTGGACTACTGAATTATAAAGCCAAGAATGTTTTCTACCCATATGAAAGAAATAAGTTTAGATGCCGATATGATTACTATTGGGCTTCAGTGTTCAAGGTTAAAAATTACAATGATTTATTCTCAACTATGTTTCTCTTTGGCATTTCCCCCTCAATATGCTTCTTAATACTTATCTTATACCATTGGCCCAGTGGCTATCACGTATTGATATCTTCAGACATCATAAGATAACATGAAATTCTAACAGTGTTGAAGAATTTGTTTTTCTTTTCATGCTCACGTTCAGATTAGTTTTATCTTCAGAATCAGCTGTAGCTCCTTTGTTCTTTTTGTAATTACACATCTTTATTGCATCAATGGCATTTGGAGGGGAATATTTATTATTCACCTGGCTCTTTCCTCATGATATCATCATCTATTGAGTATCTTAAAACAATCAATGGGAGTTTGTTTTTTCATCAATATCTGAAATGCAGTTTTACATGTTTTATACTGTGGCATCTCTGTTTGTTTATTTATTTGTACCTACTCATCAATTGTTCTGATAGATTTTTATGTATGGTTTGCCTTGATACTTTCTTCTTGAATTCAAGAGTGACCTCTGCCTTACATCTTATTTTGCAATATTTATTGTTCAATAATATGCAATCTTTTCCTTTAGCGACTTTTAAAATAACCCTTTTTGGGCAACTATGAAGTATTTACACTAACGTGGTACATAGATATGACACAACAATAACATAGTTACATATCATTTTAAAAAATTAAAACATGGACACCACAAAGATACATGCAATACATATAATTTTCTAAAAATATTTTTAATACACAGACACGTATTATTTCTTTATTGATTCTCAACTATCCAAGGTGACTTACTTCTTGGAAAATACCCATTTTCTCTATGGGAGGGAGGATGAGTTTTTATTTAGTGTTTGTACTTAGTGGGATCCTGATTTACTTTTGTTTGTGTATAACATTCCTGTCTTTGGTAGCAAGAACCTTGAGAAAACTAAAATATTTTCTGTTGGAAAAAGTTGATGAGGGAGGGGTGCTCACCGTATTAGCTAGAAGGTAGCGTCGTGGTCAATTGATCAAGAAGGGTTGGGTCTAAGTAACTTTAGATTACATAATGAGGCACTGCTAGCTAAATGGTTATGGCAATTTTCTATGGAATCAAACTCTCGTGGTGTATTCTCAGTATCAATGTGGCCCTTGTGCTTTCAATTGGGCGGGTCAAAAGCTTAAAGGCATTTCCAGAAATCTAAGGAATCTACCTCTTTGGGCTTTCCCTCCTTTCTAAATTCGTTAATTGTCTTGTTGGGGAAGGCTCAAGTAACTTTTTCTTGGATGATTATTGGGTGGGTGATAGACCCCTCCATCTTGTGTTCCTTCGCCTTTATCATCAGTCGTCCTAGTTGTGCCTTATATCTTTTATCATTTCATCCATGGCCTCTTCTTCCTCTTTCAACTTTGGCTTTTGTTGGCCCTAGTCTTATAGAAAGGCTACAAATGTTGCTACTTTAATTTCTTTGTTCGATAATATCCTTATTCGGCCTAGGAGTCGGGATATTCCTTGTTGGCTGATCCTTCATAAGAGTTCTCCTGTAGTTCTTTCTTTAACCACTCGTGGAATTGTTGCCCCTTCACCCCCGTTTATTCTCCTCATTTCGGAAGTTTAATATGCCAAAGAAGGTTGAATTCTTTTTGTGGAGGTCTTACATGGGTGTTAATACTATGGATTGGATTCTAAAGCATTCCTCCTTCTTTTGAGGCTACAATGGTGTCTTCTTTTGAGGAAGGTGTCTGAGGACGTAAGCCATTTGCTTTAGAGTTGTCAAGTTGGAATCTTATAAAGAAATTGAGGACCTTCAAAACTTCTTTCTAAGTTGTTTGGTTTTTGTGGCTGTCAAGGTGAGAACGATTTAGTCTGGAAGCTGAAGAGTTCTGGGAAGCCTATCAGTGAAGGTCAATTTTCTGACTATTGGTGTGCTGCTTTAAACTTCTCTCTGTATAAGACAATCTAGAAGGATCATTACTTGATCCCTTTTCCCCTTTACATTGTTGTTCTTTTGGGTGAGTAATAGCTTATGGGGATCTTAATACTGGTGATAGAGTCCTGTGTAGAAATCCTGGTTTGACTTTATGCCTTAACTAGTGCAAGCTGTTTAAAAGGGCTATTGAATTGGTGGGTTCCTCTTCTTAAGATGCCCATACTCTTAATGTTTGGTGGAGGCTGGTCACTTTTGGGATCAATACGATCCTTTCATGTTCTACTTGTTAATCCGAGATCCATTACTTTGCCATCAAAACCTAAATCAGAAGATAAAAGTGTTGGTCACTTTTGGGATCAATACGATCCTTTCATGTTCTACTTGTTAATCCGAGATCCATTACTTTGCCATCAAAACCTAAATCAGAAGATAAAAGTGTTGGTTGAATGCAGGTAAAACAGTTTTTTGGGTTTGTGAGTTTCGGATAGAAAGAAATTGGAAATGTAGAATTTTCCAAGGTGTTTATAGGCAGTAAATTTGGGATATTATTATCTTGGTCCCTTCTTCTTGGAGCACTCTTTCCAATTCCTTTTGTAATAATTAGCCAATTGGAGAGTCTTTTTGTAACTTAAGGATTCCTTGGGTCTTCCCTTTTGTAAGTTCATTTATTCAATAAATTCTTTGTTTCTTAGAAACTAAAAAAAAAAAAAAAAAAAAAGAAGAGAAAAAATCTCTCTGATTGCATGATAGTTACCTAAAAGTGTTCTTTTTTTGTTACTAATTCAATTCTTCACACATATTCTCCATACCCAAATCACTGAATAGGATAGGTAAAGAAAAGAAAAGAAAAAATCTCCTAACGTGTTAGTTACTAAAAAGTGTTTATTTTTTTTGTTGCTAATTCAATTCTTCATACGTATCCTCCATGCCCAAATTATGTGATATTATAGGTAAAGTATGTCAATGAAAAGTTCGAAGTAAAATTGGAAAGGGACATCAATGAGAGATGGTTCGAATGGACTACATAAAATTTTAAGTTCGATGCAAGCAAGATTAGGATGGTGTTATTTGTTGCATTCATTTTTTGGAGGCTTGTGATTCAAAATTTTGAGTGCTTTCATGTTGCAGCTCTCATATTTTGACACACTCATATTGAACACCTCTAAAATTGTTTCTAAATTACTGTTTATAATTGAAAGTTCACGCACAAACATATTCATGTAATTTTTTATAATACTTTCTATTACCCATGATTTTATGTATTTGTCCCCTACCCATCTTGATTTATGTCTCTTTCACAATTGTAGGTAGAAATGAAGGATCGTTTTTCTGGCAAGGCTCGGGTTGCTTTGGCAGAGGCTCCAAATGAGGCCCTTCCTCATAAATGCAGGCCTAATTTTGGTGCTGCATGGTTGGCTAAAGATAAATTCAAGGTGCACTAGCAATGGATCTCACCCATGATTGATTTTACTGCATAGATTTGAAGTCCTTAGATTATTCTGTTTACAAAGGACACAGATAAGGTATTCACCATCTTAACCAGTTTCTGTTTTATTTACTTCTAATACACTTCCTATGTTGTTCTTCGATTAGGTGAATGAAACATATGGCTGCTGGTACTCATCTGACATTTCCACAGTGAGCTTAGACTATGATGGCTTTTCCAGCTGTCAAGCTCAAGAACCTACAAAAGTTGAGATGATTAAAAGATACTATTTCCTGTAAGTTACTTTTTTACCAACTTTTTCCAATTGTGGCTTTGAATATGGAAGAGTTTGTTAATTTTGCAGGTAGTATTGACTTGTATTTCTTATATTTTTTTCATCGTTTGCATGGAATTCTTAGTCTTATAGGCAATATGTGTATTGCAGTCTGCCATTTTTGTCTTATCACGGTGTCATCTTGAATAGTTGGATGCAGTTGCATCTGTAAATATTTTTTTCTTTGCAAAAAAAAAAAAAAAAAAAAATCTACCAATACTGGTAAAGGAGCGAACAAGGGCTATGCTTGACCAGATAACGGGAAAGAATCTTCATTACTAGGCGGAGCTGGGCTCAAAAGATCTCTCAAGTTGACTTGCTAGAGAACCAAGATCAATCTCTATCATCTTTCGAAACAACATTAACCATTGAACTGGAAACCTTCTGCTTTGTTGCATCTTTTACTATGGTTTTCTCCTTCATGCATACTGGTTTTTAACTAGTGCTAATTACCCATTTCTTCCACATTGAAATCTTGATACATTTAGAAACACCCTGAAATGTGAATTCTTGCTCCTGCCTGAAGGTATGATCCATTGTTTTGTCAAGTATTACATAATCCAATTGCTGACGATGTTTTGTCATTGTATAGTCAACTTAAAGATTACCAATGTATTAATTCCACTTAATTGTATCTCATAAAACATCTTAGAGCTCCTCAAAAAAGTTCCGGATAGTTTAGTAGCCATTTGGTCTGGTACTAAACTGCTTGATTCAATAATCGATTATCATCGTTCTACTGGTTTACAGGTGCACGAAACTATTGCTATCTTGGTATTCCAGCAAGGAAAGAACTATATTTTGGAGGTGGGATATGTTGGCTGGACTTATGACGGGTTTCTCGACTTCATTGATCACCATTACTGTCTTAAGGGTCCTACAACCACTGATACCTTGGATGCTTAGGTACTTCACAACAAGGTTTTTTATCCACCTGAATCGTGCTTGTTTTCTGGTAGCATACTTCTCCTTTGTAGGTTGGTTAATTATCCAGTATGGAAAAAGGCTTAGCCTTCCTGAGATTTTCAATATTCTAAAAAGTAGGCTATGGTCCTCAGATTGATCAAATGAAAGTTTGGATCATTGAGTTTCAACATTTGAAACAATAGAAAGTAAATGTAGCCTTTTTTTTTGCAGTGGATCGGTACCAGATAACTGGTTTGTTAGAATCTATTAAATTTGGCTGTTTGTAGAAATATGTATGATGATATTAATGAGATAACGCTGTAACTTCTTATATGTGAAAATTTGACATGAGAAGAAGTGGATTTACATATGATTACAGAAGCTGTTCTCAAGTTTTCCGGACTTATCTGGGCTTGCTGTTATCGCTTCAAGGTACTTATCTCTTTCTAAAATGGAAAACAT AAAAAAAAAAAAAAAAGAAAAAAAGAAAGTCGATCGTTTCGTCTCTCCACAGGAAAATAAAATTTCTTCTATCCCTCTGGTCAAAGGGACTCCGATCACCGGATAGATGTTTCCGGTGGCCGGAGATTTCGTCTCCTCAAATCCTTGAACTTCGTGCTGCTCATCACCGAAATCAGAGTGATTATCCTGCAATTTCAGTATTCTAATGGATTCTGAGGACGATGAGGTCTCTACGTCTGAGAGGACGACGAAGAGGGGTTATCTAGCTGTAACTATGCGATGGTGTGCCGTGCTTTTGATTCCAGTAGTTTCATTCTTTCTTGTGACTGTATCTTTGAGTTTAGTTGCTGTTTTTGTCGCCAATTCGTCAATTACTAGTCCAATTTCTTTGCGTTCTCAGTGCAAGATTGTTTCCAGCAGTGTGGACCTTAGGTCATCCAAGGTTTGTGAACTTGGACTACTGAATTATAAAGCCAAGAATGTTTTCTACCCATATGAAAGAAATAAGTTTAGATGCCGATATGATTACTATTGGGCTTCAGTGTTCAAGGTAGAAATGAAGGATCGTTTTTCTGGCAAGGCTCGGGTTGCTTTGGCAGAGGCTCCAAATGAGGCCCTTCCTCATAAATGCAGGCCTAATTTTGGTGCTGCATGGTTGGCTAAAGATAAATTCAAGATTATTCTGTTTACAAAGGACACAGATAAGGTGAATGAAACATATGGCTGCTGGTACTCATCTGACATTTCCACAGTGAGCTTAGACTATGATGGCTTTTCCAGCTGTCAAGCTCAAGAACCTACAAAAGTTGAGATGATTAAAAGATACTATTTCCTGTGCACGAAACTATTGCTATCTTGGTATTCCAGCAAGGAAAGAACTATATTTTGGAGGTGGGATATGTTGGCTGGACTTATGACGGGTTTCTCGACTTCATTGATCACCATTACTGTCTTAAGGGTCCTACAACCACTGATACCTTGGATGCTTAGGTACTTCACAACAAGGTTTTTTATCCACCTGAATCGTGCTTGTTTTCTGGTAGCATACTTCTCCTTTGTAGGTTGGTTAATTATCCAGTATGGAAAAAGGCTTAGCCTTCCTGAGATTTTCAATATTCTAAAAAGTAGGCTATGGTCCTCAGATTGATCAAATGAAAGTTTGGATCATTGAGTTTCAACATTTGAAACAATAGAAAGTAAATGTAGCCTTTTTTTTTGCAGTGGATCGGTACCAGATAACTGGTTTGTTAGAATCTATTAAATTTGGCTGTTTGTAGAAATATGTATGATGATATTAATGAGATAACGCTGTAACTTCTTATATGTGAAAATTTGACATGAGAAGAAGTGGATTTACATATGATTACAGAAGCTGTTCTCAAGTTTTCCGGACTTATCTGGGCTTGCTGTTATCGCTTCAAGGTACTTATCTCTTTCTAAAATGGAAAACAT ATGGATTCTGAGGACGATGAGGTCTCTACGTCTGAGAGGACGACGAAGAGGGGTTATCTAGCTGTAACTATGCGATGGTGTGCCGTGCTTTTGATTCCAGTAGTTTCATTCTTTCTTGTGACTGTATCTTTGAGTTTAGTTGCTGTTTTTGTCGCCAATTCGTCAATTACTAGTCCAATTTCTTTGCGTTCTCAGTGCAAGATTGTTTCCAGCAGTGTGGACCTTAGGTCATCCAAGGTTTGTGAACTTGGACTACTGAATTATAAAGCCAAGAATGTTTTCTACCCATATGAAAGAAATAAGTTTAGATGCCGATATGATTACTATTGGGCTTCAGTGTTCAAGGTAGAAATGAAGGATCGTTTTTCTGGCAAGGCTCGGGTTGCTTTGGCAGAGGCTCCAAATGAGGCCCTTCCTCATAAATGCAGGCCTAATTTTGGTGCTGCATGGTTGGCTAAAGATAAATTCAAGATTATTCTGTTTACAAAGGACACAGATAAGGTGAATGAAACATATGGCTGCTGGTACTCATCTGACATTTCCACAGTGAGCTTAGACTATGATGGCTTTTCCAGCTGTCAAGCTCAAGAACCTACAAAAGTTGAGATGATTAAAAGATACTATTTCCTGTGCACGAAACTATTGCTATCTTGGTATTCCAGCAAGGAAAGAACTATATTTTGGAGGTGGGATATGTTGGCTGGACTTATGACGGGTTTCTCGACTTCATTGATCACCATTACTGTCTTAAGGGTCCTACAACCACTGATACCTTGGATGCTTAGGTACTTCACAACAAGGTTTTTTATCCACCTGAATCGTGCTTGTTTTCTGGTAGCATACTTCTCCTTTGTAGGTTGGTTAATTATCCAGTATGGAAAAAGGCTTAGCCTTCCTGAGATTTTCAATATTCTAAAAAGTAGGCTATGGTCCTCAGATTGA
BLAST of CmoCh06G006080 vs. TrEMBL
Match: A0A0A0L6A9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G005550 PE=4 SV=1) HSP 1 Score: 560.8 bits (1444), Expect = 1.0e-156 Identity = 282/313 (90.10%), Postives = 292/313 (93.29%), Query Frame = 1
BLAST of CmoCh06G006080 vs. TrEMBL
Match: M5W9U5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008010mg PE=4 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 1.1e-89 Identity = 173/308 (56.17%), Postives = 229/308 (74.35%), Query Frame = 1
BLAST of CmoCh06G006080 vs. TrEMBL
Match: W9R050_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006351 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 4.5e-88 Identity = 183/314 (58.28%), Postives = 220/314 (70.06%), Query Frame = 1
BLAST of CmoCh06G006080 vs. TrEMBL
Match: V4T3W8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002048mg PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 1.8e-84 Identity = 170/305 (55.74%), Postives = 215/305 (70.49%), Query Frame = 1
BLAST of CmoCh06G006080 vs. TrEMBL
Match: A9PAS7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s01320g PE=2 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 3.0e-84 Identity = 170/313 (54.31%), Postives = 216/313 (69.01%), Query Frame = 1
BLAST of CmoCh06G006080 vs. TAIR10
Match: AT4G19140.1 (AT4G19140.1 unknown protein) HSP 1 Score: 260.4 bits (664), Expect = 1.4e-69 Identity = 138/309 (44.66%), Postives = 202/309 (65.37%), Query Frame = 1
BLAST of CmoCh06G006080 vs. NCBI nr
Match: gi|449456775|ref|XP_004146124.1| (PREDICTED: uncharacterized protein LOC101211843 [Cucumis sativus]) HSP 1 Score: 560.8 bits (1444), Expect = 1.5e-156 Identity = 282/313 (90.10%), Postives = 292/313 (93.29%), Query Frame = 1
BLAST of CmoCh06G006080 vs. NCBI nr
Match: gi|659095460|ref|XP_008448592.1| (PREDICTED: uncharacterized protein LOC103490722 [Cucumis melo]) HSP 1 Score: 557.4 bits (1435), Expect = 1.6e-155 Identity = 281/313 (89.78%), Postives = 292/313 (93.29%), Query Frame = 1
BLAST of CmoCh06G006080 vs. NCBI nr
Match: gi|645265251|ref|XP_008238060.1| (PREDICTED: uncharacterized protein LOC103336739 [Prunus mume]) HSP 1 Score: 339.7 bits (870), Expect = 5.3e-90 Identity = 173/301 (57.48%), Postives = 224/301 (74.42%), Query Frame = 1
BLAST of CmoCh06G006080 vs. NCBI nr
Match: gi|595847433|ref|XP_007209323.1| (hypothetical protein PRUPE_ppa008010mg [Prunus persica]) HSP 1 Score: 338.2 bits (866), Expect = 1.5e-89 Identity = 173/308 (56.17%), Postives = 229/308 (74.35%), Query Frame = 1
BLAST of CmoCh06G006080 vs. NCBI nr
Match: gi|694379070|ref|XP_009365748.1| (PREDICTED: uncharacterized protein LOC103955566 [Pyrus x bretschneideri]) HSP 1 Score: 334.3 bits (856), Expect = 2.2e-88 Identity = 172/299 (57.53%), Postives = 225/299 (75.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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