CmoCh06G001740 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGTCTTAAAAGCGTATTAAGCCAAAACGCGAGCCGTGGAAGTACAAATTCGGTCGACTTTTTCCGATTCCGGCTCATCGTTCCGGCGGTCACGGCAAAGGCGACGAAGCGAGAAGAAGGGGAGAGCGAATCAAGAGGCCTCCCGTCGGCCATTTCTCTCAAATTTCTTCGTGAGTAGCGGTGCGTTACATGTTTGTTTGTTTCGTTGTCGCCTGGATTTCGAGATCGCTTAGGTTTTTAAGCGCATTTACTCTTTTTTACAATCCTACATTTGGTAATCTAACCGCTACGGAATCAATTGCAGTGCTTTGCATTCTCTATCTCGTTTGTCACTCTTATGTGGATTGGCGATTCTTTTTGGTAACAATGGCGGAACAGCTAAACTAATTTTTCTTCGTTTTTTTTATTGTTTTCAGTAAGCTTCTGTTTGTTTGTTTTCCTTGGATTTTGGTTTTGTGGTTGATCTAGGATGCCGCATGATTATGTGCTTGGAGAAGCTATTCATTTCGGTTTCGAGATCACTTTGGCGGTTCATTTTTTCGTTTTCGTTTTTGCTTTTGTTTTTTGTTTTTTGTTTTTCAAACTCAATTACTCTCCTTGTTCCTACATTTTGGTTATCATACTGCTGCGGAAGGTTTTTTAAAAATTTTAGTTTATTTCTATAATTCGTTTACTTTTTTTGTTCATATATTTTGATTGTCAAACAGTAGTGCTTTAATTTCTCTCTCCAGTCGTCCGTTCTTGTGAGGATTGAAGGTTCTTGTTGGTAATAATGCCAGGATAATTATATAAACGTTCGCTACTTTTTACTGCCTTTTTGTTCTCAGGTAAAGTGAAGAGTCTAAATTATTATCCTTCTCCCCTTTCTGGGATTTCTTGCATCTGTCGGATTTTAGTTTAAACGGGGAATGGAAAATGAAAAGAAGAAGAGAAAAAACAAGAAAAAGAAAAACAAGCAGATTAGAACCTCAGAAGATGACACAATTGCTTCAGAATCGACTTCTGTGGACGATACTCACACAACAAATGGACAGAATGATCAAAATCCAATTTCTGGTACAGTAGATCCTTCGTATCAGCAGAGCAGGGGAACAAAAGATGTAAGTTTGTCTTTGAATTCTATAATGATTTGTTACCGATCTTTATTATTAGGTGGTTTGATTCATCGCAGAGCTGCTGGATGTTGTAAATGATGACATGAACATGTGTAGCCCCTTCTATTTGTTCATTTGTCTTATTTTATAAACATGAATGAATCAGCTCCATCATTGAATCTCATGCATACCATCTTACCAAAGACCAGAAAGCAATGCCGAAAAAACTGATGCTCTTCTCTCTGTCATAGCCACAGTCCTTGTAGAGCACCATAAATAAAATACAAAATCCATGTTATCTAAATTCACTATCAATATTAGAACAACACTTAATATGATTTTTGTAGGCCGTTTCTGAAGAGACAAACGAGCATTTGAGGAAGGAAAGCCTTTTGCTTGCACATGACAAGGTGATGTCATCATTGAACAAATTACACTGGTGACAGTATGGTGCTTACTTTCCCCTACTAATGCATTTTTTATTTCTTTGCAGGCTAAGCTGGAGGATACAATTAAACGCTTACATGAGGAAAACAACGTACATATGCAAAAATTGGTAATCCATTTTTGCAAACATTCAAGTAGCTGATCTATGTGCTTGTTTTTACCTTTCCTTTCAGAATTGTATGCACGTGTTTATCAAATAATTATTTATTGCAGGCTGACCTAGAGTTGAAGCTTGTAGAATTTGAGGGGGAAAAGCACTCATGGCTTCGAAAAGAGGTTTTTTCTTCTCAAACTATTTTTTTGCTATGCACCAATCTAATCGTTTTAATTAGCCATATTTATTTATTTTTTTAAAAGCAGGAGGCACATTAAAGTACAAATAACTTCAGAATTTTTTGTTATTGTGAAGCGCGTAGTATGAAAATAAAAAAATAAGAATATTTTGTATGGTAAACTGTAGTGTTAATAATAAAACCGAGAAAAATAAAAGAAACGAGAGCTTTTTAAGAGATTCTTAAAAGGCAGGCTTTTAGAGAACATTGCATATTTCGTGAACTAATATAAGAAAAGATTGAGACACGAGATGGCACCCTGAAGGTGTTTAGTGTCTAGATGCGCCTTTGCAATACAATCATCTTCCCCTACAACCTTCATTTTGCATTACAATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTAATGCATCTGTTGGTTCCTAAAACCTAGTATTATCTCCTTAGAGATTGGGTTCAACTGTTTGCAATCTGCAGGAAACGTTAGTGGATAAAATTAGAAGGTTACAAGAGGACAAAACTGCTTTGGATTTAGAAGGGGTAATTTTTTCTAGGCTGCATAGTTCCTTCTCTTCCAAACCATTTCATCATTGCTATTTTTCAGCTTGTTTCCTCCTGAACGTGCACAATTCTATGTTCTATTAATTTCCCAGAAGTTATTGATGCGTCACTAAATTTCCTCATTTTGTATTATGAAGGCCAGGTTATTGCACACAATTGAGCAACTAGAGAGAGATAAAGCTTCATTGATTTTTAATGAGGTAATCGATATACTATTGATGCTTGATAGAGACATGCTGTGTGGTTACCACCTCTTTTACAAATATGGTTCTTAATTCTTTATGGTTGATGAGGAAAAGTTTGTGGACAGTTTTGAGCTTGATTATATATGTTGTTTTGGATACACGAAGGACTCACAGTATGCTGTCATTGAAAGGGGTCTATATTCCTATTGAGGTGGTTTGTCTTTCACAGAATTCAAGCACGGAGATGATTGTGGATAAGAACAAGGACATCTCTAGGTTACAGGCGCAGGTATACTGCTTCACTAACTCAAGTAATCCACAAATAAATTGCATGAACACGAGTTTTATCTCTTTCAGTTGCTTTCTAGTTGTGCAAATGGCCACCAACTTTGATGTCACCATAGTCATTGGAAGAACTAGTAACAAGATGAATAGGGTCGGGAGGATATTCGTGTTTTAAATGTATTGTCGTTCAAAACTACTTATTTACTTGCGTACACGTTCATTCATTTATGAGCTGCCGACATAGGACACTACTTTTTTGTTCTGATGAGGAATTGAAAACAAGGCCTGACAGGTTGTGGCGTTGGAAGAACAAAGGCGTGATCTGTTGCAAGAAAACAAACAACTGACGGAAAATGTTGCTGATTACCAGTCAAAAATCACGATCCTTGAGAGGAAAATCTCTTCCACTCACACTCACTCTTCAGATCGAGTCACAAAGGTTCACTTCTTATTCTCAGCTATTAAATAACATCGAGAATAAAATTTCTTAGAAGAAAGATCATTGCAAGGTGTTTTGAAACTAGCTGTAGACAATTCGCTTTTGGCAGATGACATATTGGTCTCCCTTTAAATGTTGGTTTATTTTTTTTTTACTTTTTATCTCCTGAATTATAGTGCAAGAATAAGTCTTTACTCCTTGTATTCCTCTTGCCAATACGTATGAGATGAGCAGGAGATGTTGAGTTCACAAGTGGATGCAGCTCGTATTCTGGTTGATAAATTGATTACAGAAAATGCAGAGCTTATTGGGAAGGTAATAGAATCAGCTATACGTCCACTTGCCTTCATTTTGGCAACGTTTTACTTCAGTTTGTTCTGGATTGACGTGTATTCAAAGAGATTCTAATTGCTGAACTCCTGATATCATGTTTTATGATAGAGTAATACTACATTAGATGCAGAGTAGCTGGTTAGATCATACAAAAGTTAATGAAATGATCGTCTTTGCTTTATTTTGAGGTTAACATCTCGCCCTGTGTATTCTTATTAGGTGAATGAGTTATATGTTGAGCTTCAAAGGGTTACAAAGGCTGAGGTAAATTCAGGCATGGAGCCTGACCAGATGGTTGAAGCTACTACCAACACTGCTACTTTCAACGAACCTGAACCTCCCTTGATTCATAATATGGTCACATCAAGTAAAAGTTTGGACGCATTAGAATCTGTTCCAATCCACAACCATAGCGTTGGCTATAATATTGTGGACATGGACAACGATTTGCTTCTGTCTCCAACCTCTTTAATACTGCCAATGGAGGAGGGAGAAATCGAACAAATTCCACCTCAAGAAAATGAAGATAGGAACAGGAACCGAGAACTGTCGGGTGCAGAGAGCGACGAGGAGGATGTGCTTCTTTCAGATGCCCCTTTGATTGGGGCTCCTTATCGGTTGATATCATTTATGGCTAAATATGTAAGCGGTGCTGACTTGGTTGGCAAAAGCTGAGTTATCATTCTTTTACACGAGAGACTAATCATGAAAGCTGCCCCCCACAGGTATAGAATCAAAAGCTTAAGATGATAAGCGACTTTTTCGTAACCATATCACATCCGGGATATGATGAAATAGGACTACCATTGAGTTTTTTATGGGCATTCTTTCAAATACCCTTATATCAGACTACCATTGAGTTTTTTATGGGCATTCTTTCAAATACCCTTATATCAGACTACCATTGAGTTTTTTATGGGCATTCTTTCAAATACCCTTATATCGCCCGTTTCAAAACCCACCGTTTCATGATCTTTATACTTTTGAGACTTCATTTTCACATGTTTTGAGCTAATTAATGAAATCCTGTCTTACATCGGATGAATGTTAGAATAACACTAACACATCATTTTGATGGTTGTATTTTATGTTTGATTCTATTTTAATCTTTGTACGTCTAATTTTAGTTTAGTTTGTGTACTTTCAATAAATTTTAATATTGATTTCTATTGTTAGTTTGAAGTTAATTTTTCATTGAAATCGGTTAATAATTATAATAATTTTCAGGTAGGAAAGGCACAATATGTTCATATTTCTAAAATGTATGGGGAAAGACAAATATGGACTGATTTTTTCTCCCGAAAAGTTAACAACAAACTAACAATTGGGATGGATTTGAAGCTTTATTGAGATTCCAAGGACTATAATTGGACAAATGTGTCCATCCCCTTGCTTCTATCTCTGTTCAGTTAAATGGAATATATATATGTGTGTGTATATATATATATTGTGGATGATTATTCTACGAATCTACGCAGTATCTCAAGCATTGAAACAAGGCGACATGGGAGTAGTATCTCAGGCATTGAAACAAGGCAACATGGGAGAATCGTGCGCTTGAAAAACCGCCCCCAAAAATTACACAATTGGCACACAAACAATGATGGGTCGTTTTTAGACGCAATGCTAAAAATGCAAAAATTCATGAGATGTCACAGTCATACTTGTCTAAGGTGTGAGCCTGTGACTGTATATCAGATGTCCCGAACATATTATCCATGGCCACATATGTGTTCCAAACTCCATTTACTTACTTTCGT TTTGTCTTAAAAGCGTATTAAGCCAAAACGCGAGCCGTGGAAGTACAAATTCGGTCGACTTTTTCCGATTCCGGCTCATCGTTCCGGCGGTCACGGCAAAGGCGACGAAGCGAGAAGAAGGGGAGAGCGAATCAAGAGGCCTCCCGTCGGCCATTTCTCTCAAATTTCTTCGTGAGTAGCGTGCTTTGCATTCTCTATCTCGTTTGTCACTCTTATGTGGATTGGCGATTCTTTTTGGTAAAGTGAAGAGTCTAAATTATTATCCTTCTCCCCTTTCTGGGATTTCTTGCATCTGTCGGATTTTAGTTTAAACGGGGAATGGAAAATGAAAAGAAGAAGAGAAAAAACAAGAAAAAGAAAAACAAGCAGATTAGAACCTCAGAAGATGACACAATTGCTTCAGAATCGACTTCTGTGGACGATACTCACACAACAAATGGACAGAATGATCAAAATCCAATTTCTGGTACAGTAGATCCTTCGTATCAGCAGAGCAGGGGAACAAAAGATGCCGTTTCTGAAGAGACAAACGAGCATTTGAGGAAGGAAAGCCTTTTGCTTGCACATGACAAGGCTAAGCTGGAGGATACAATTAAACGCTTACATGAGGAAAACAACGTACATATGCAAAAATTGGCTGACCTAGAGTTGAAGCTTGTAGAATTTGAGGGGGAAAAGCACTCATGGCTTCGAAAAGAGGAAACGTTAGTGGATAAAATTAGAAGGTTACAAGAGGACAAAACTGCTTTGGATTTAGAAGGGGCCAGGTTATTGCACACAATTGAGCAACTAGAGAGAGATAAAGCTTCATTGATTTTTAATGAGAATTCAAGCACGGAGATGATTGTGGATAAGAACAAGGACATCTCTAGGTTACAGGCGCAGGTTGTGGCGTTGGAAGAACAAAGGCGTGATCTGTTGCAAGAAAACAAACAACTGACGGAAAATGTTGCTGATTACCAGTCAAAAATCACGATCCTTGAGAGGAAAATCTCTTCCACTCACACTCACTCTTCAGATCGAGTCACAAAGGAGATGTTGAGTTCACAAGTGGATGCAGCTCGTATTCTGGTTGATAAATTGATTACAGAAAATGCAGAGCTTATTGGGAAGGTGAATGAGTTATATGTTGAGCTTCAAAGGGTTACAAAGGCTGAGGTAAATTCAGGCATGGAGCCTGACCAGATGGTTGAAGCTACTACCAACACTGCTACTTTCAACGAACCTGAACCTCCCTTGATTCATAATATGGTCACATCAAGTAAAAGTTTGGACGCATTAGAATCTGTTCCAATCCACAACCATAGCGTTGGCTATAATATTGTGGACATGGACAACGATTTGCTTCTGTCTCCAACCTCTTTAATACTGCCAATGGAGGAGGGAGAAATCGAACAAATTCCACCTCAAGAAAATGAAGATAGGAACAGGAACCGAGAACTGTCGGGTGCAGAGAGCGACGAGGAGGATGTGCTTCTTTCAGATGCCCCTTTGATTGGGGCTCCTTATCGGTTGATATCATTTATGGCTAAATATGTAAGCGGTGCTGACTTGGTTGGCAAAAGCTGAGTTATCATTCTTTTACACGAGAGACTAATCATGAAAGCTGCCCCCCACAGTATCTCAAGCATTGAAACAAGGCGACATGGGAGTAGTATCTCAGGCATTGAAACAAGGCAACATGGGAGAATCGTGCGCTTGAAAAACCGCCCCCAAAAATTACACAATTGGCACACAAACAATGATGGGTCGTTTTTAGACGCAATGCTAAAAATGCAAAAATTCATGAGATGTCACAGTCATACTTGTCTAAGGTGTGAGCCTGTGACTGTATATCAGATGTCCCGAACATATTATCCATGGCCACATATGTGTTCCAAACTCCATTTACTTACTTTCGT ATGGAAAATGAAAAGAAGAAGAGAAAAAACAAGAAAAAGAAAAACAAGCAGATTAGAACCTCAGAAGATGACACAATTGCTTCAGAATCGACTTCTGTGGACGATACTCACACAACAAATGGACAGAATGATCAAAATCCAATTTCTGGTACAGTAGATCCTTCGTATCAGCAGAGCAGGGGAACAAAAGATGCCGTTTCTGAAGAGACAAACGAGCATTTGAGGAAGGAAAGCCTTTTGCTTGCACATGACAAGGCTAAGCTGGAGGATACAATTAAACGCTTACATGAGGAAAACAACGTACATATGCAAAAATTGGCTGACCTAGAGTTGAAGCTTGTAGAATTTGAGGGGGAAAAGCACTCATGGCTTCGAAAAGAGGAAACGTTAGTGGATAAAATTAGAAGGTTACAAGAGGACAAAACTGCTTTGGATTTAGAAGGGGCCAGGTTATTGCACACAATTGAGCAACTAGAGAGAGATAAAGCTTCATTGATTTTTAATGAGAATTCAAGCACGGAGATGATTGTGGATAAGAACAAGGACATCTCTAGGTTACAGGCGCAGGTTGTGGCGTTGGAAGAACAAAGGCGTGATCTGTTGCAAGAAAACAAACAACTGACGGAAAATGTTGCTGATTACCAGTCAAAAATCACGATCCTTGAGAGGAAAATCTCTTCCACTCACACTCACTCTTCAGATCGAGTCACAAAGGAGATGTTGAGTTCACAAGTGGATGCAGCTCGTATTCTGGTTGATAAATTGATTACAGAAAATGCAGAGCTTATTGGGAAGGTGAATGAGTTATATGTTGAGCTTCAAAGGGTTACAAAGGCTGAGGTAAATTCAGGCATGGAGCCTGACCAGATGGTTGAAGCTACTACCAACACTGCTACTTTCAACGAACCTGAACCTCCCTTGATTCATAATATGGTCACATCAAGTAAAAGTTTGGACGCATTAGAATCTGTTCCAATCCACAACCATAGCGTTGGCTATAATATTGTGGACATGGACAACGATTTGCTTCTGTCTCCAACCTCTTTAATACTGCCAATGGAGGAGGGAGAAATCGAACAAATTCCACCTCAAGAAAATGAAGATAGGAACAGGAACCGAGAACTGTCGGGTGCAGAGAGCGACGAGGAGGATGTGCTTCTTTCAGATGCCCCTTTGATTGGGGCTCCTTATCGGTTGATATCATTTATGGCTAAATATGTAAGCGGTGCTGACTTGGTTGGCAAAAGCTGA
BLAST of CmoCh06G001740 vs. TrEMBL
Match: A0A0A0L9P2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G727980 PE=4 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 8.0e-141 Identity = 295/416 (70.91%), Postives = 333/416 (80.05%), Query Frame = 1
BLAST of CmoCh06G001740 vs. TrEMBL
Match: A0A061EHB1_THECC (Mitochondrial ATP synthase D chain-related protein, putative OS=Theobroma cacao GN=TCM_019675 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54 Identity = 191/480 (39.79%), Postives = 264/480 (55.00%), Query Frame = 1
BLAST of CmoCh06G001740 vs. TrEMBL
Match: A0A0D2S198_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G236000 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 3.8e-50 Identity = 169/437 (38.67%), Postives = 246/437 (56.29%), Query Frame = 1
BLAST of CmoCh06G001740 vs. TrEMBL
Match: A0A0B0NHC9_GOSAR (Formin-3 OS=Gossypium arboreum GN=F383_05214 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.1e-49 Identity = 172/455 (37.80%), Postives = 244/455 (53.63%), Query Frame = 1
BLAST of CmoCh06G001740 vs. TrEMBL
Match: A0A0D2S1A3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G236000 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.4e-49 Identity = 162/420 (38.57%), Postives = 233/420 (55.48%), Query Frame = 1
BLAST of CmoCh06G001740 vs. TAIR10
Match: AT2G38580.1 (AT2G38580.1 Mitochondrial ATP synthase D chain-related protein) HSP 1 Score: 157.1 bits (396), Expect = 2.3e-38 Identity = 117/357 (32.77%), Postives = 193/357 (54.06%), Query Frame = 1
BLAST of CmoCh06G001740 vs. NCBI nr
Match: gi|659083358|ref|XP_008442312.1| (PREDICTED: ERC protein 2 [Cucumis melo]) HSP 1 Score: 526.9 bits (1356), Expect = 3.1e-146 Identity = 301/416 (72.36%), Postives = 339/416 (81.49%), Query Frame = 1
BLAST of CmoCh06G001740 vs. NCBI nr
Match: gi|449439795|ref|XP_004137671.1| (PREDICTED: uncharacterized protein LOC101221440 [Cucumis sativus]) HSP 1 Score: 508.4 bits (1308), Expect = 1.1e-140 Identity = 295/416 (70.91%), Postives = 333/416 (80.05%), Query Frame = 1
BLAST of CmoCh06G001740 vs. NCBI nr
Match: gi|297741755|emb|CBI32887.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 232.6 bits (592), Expect = 1.2e-57 Identity = 179/465 (38.49%), Postives = 268/465 (57.63%), Query Frame = 1
BLAST of CmoCh06G001740 vs. NCBI nr
Match: gi|1009159608|ref|XP_015897904.1| (PREDICTED: binder of USO1 and GRH1 protein 1-like isoform X8 [Ziziphus jujuba]) HSP 1 Score: 227.3 bits (578), Expect = 5.1e-56 Identity = 192/455 (42.20%), Postives = 268/455 (58.90%), Query Frame = 1
BLAST of CmoCh06G001740 vs. NCBI nr
Match: gi|1009159606|ref|XP_015897903.1| (PREDICTED: binder of USO1 and GRH1 protein 1-like isoform X7 [Ziziphus jujuba]) HSP 1 Score: 223.0 bits (567), Expect = 9.6e-55 Identity = 191/457 (41.79%), Postives = 266/457 (58.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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