CmoCh06G001470 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGGCCAGGGCGGTGCTTGCTGGTTACGGGGCCTCCGGTAAGCTTTTGCCCCGCCGTAGATCGTAAAATGGATTTGGATGAATACATTTGAATGAAAAGAAATGTGATCATGTTTTGTTTGGGTGTAGGCTGTGGGCAAAACCACTCTGATCGTCAGGGTATTTGAGATGCTTAAAGCCTCTAACCCTAACTTGAAGATCAAAGGCTTCTATACTCGTAAGATGCAGATTTCTTCCTCTTTTTGTTTCTCTGCGATCGATTTTGCTATGGATGTTCCGTTGTCACAGGAGAAGTCAGGCAAGGAAGCCAGCGTGTTGGCTTTGAAGTCGTTACCTTAGATGGCCGAACATCTCCCCTTGCTTCGACCTCTGTGTCCAGGTACTCACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTATCTCACTTCCGCTGGTTCATTAGGCTCCATACTTGATGCTCTGATTCTTCATTTTCTTCCAATTCTGTGGGAAATTATGGATTATTTGCTTAATTTGTAATGCAATGGCTTGTGATTCTCCTTTGCTTCTTAATTTATGAGTGGTTGCATTGCTGCGACCTTACTTGGAACAGTCCTTGAGTTCTAAAGAATGGCTGCATTAATTTTGTGTTAGCTTCAATCGGTATGGTTGAAATGGCATCCACATGGTGAAATTTGAAAGAGAGAAAACTTAGTGAAGAAGTTGAGTTTTTCAGTTGGAACGGACGGGATTGTCGAGAGGGAAGGCGATTTTTTATTTCTTGTTTTAGAAGTGTCCAAGCCTATAGAAATATCCTGATTTTAGAGTAACATCTATGGATGTGTGTTTGTAGTCTTCAAAGTTCATACGCACAAATTTGTTTGTGCCCTGAGCATGTTTATGTTTATGTGTTGAGGTTTGCATTCTAGGCTTGAGAGAGTGCCTAAACTTGATTGGATGGTATAAGGTTCATGTTTATGTTCATGTTTCCTGTAACTATATTGATATCCATTGCAGCTCAGAGTCTTTAAGATGGCCCACTGTTGGGAGGTATAAAGTTGATATAGCATCATTTGAGTCATTGGCATTGCCAGAATTGCAGGTAATATGGGTTATTTGGAACTTAGAATGTGCACAGATGAAGAAGAACTCACACTTGACTTTTGAAAAGATTTGGAAGAACTCTATTTTGAATGGCTAAAGCAATGATCTCTGTCTAGGATGAAAAGACAGTATTCTCCATCGTGTTTATCTAAATAAATAAATAAAAACAGGGAAGCGTTCTCCTTCGAGGTTACGGGTTTATGGCCTTAACATAACTTCTGAAGAAATGGTATCTGGCAGGTTGAAAAAGATACAGATCTGTTCATCATAGACGAGGTTGGGAAGATGGAATTGTTTAGTTCATCATTTTTTCCGGCAGTTCTTAAGGTTTTGGAATCAAATACTCCAGTTTTGGCTTCAATTCCCATCCCCAAGTCTGGACGGGATATACCTGGAGGTACATTATTCCCATAAATTCAATACTCAGCTTTGTCTTTCACTTGGATTAAGATTTGGGTTTAGGGTTTTTTGTGTTGTATGGTGATTCCACAGAATCTAAACTTGCGTGAACTGTGAAATTAGGAACAGTTGCAAGGCTGAGAAATCATCCAGAGGCAAATATATTTACGTTGAATCCAAGTAATAGGGATGGTGCTACAGAGCAAGTTCATGCCCAACTGTTGAACATCCTGGAACAGCAGCATCAGCAGCATTAGCTGTTCTACTTTTAAGTAAGTTTTAGGGCAGGGCAGGGCATGTCTAAACTTGTGATAAGTTGGTGGCGGATCTAAATCTTCAAGGATCTTTATGATTTCAAATTTATGTACTGTTTGTTGGATTTTACAGTGGTTTATATTTATGATTACCCAGCTTAGTGCTAACCATTTCGATGAACATGCAAAGCCACTGGTAAATGTCCTATGTAAGTGGAAATTTTGCTACAATAATTTTAGATTTGGAGGAGCTACATAGAATTTCAAGTTAA ATGGGAGGGCCAGGGCGGTGCTTGCTGGTTACGGGGCCTCCGGTAAGCTTTTGCCCCGCCGCTGTGGGCAAAACCACTCTGATCGTCAGGGTATTTGAGATGCTTAAAGCCTCTAACCCTAACTTGAAGATCAAAGGCTTCTATACTCGAGAAGTCAGGCAAGGAAGCCAGCGTGTTGGCTTTGAAGTCGTTACCTTAGATGGCCGAACATCTCCCCTTGCTTCGACCTCTGTGTCCAGTCTTCAAAGTTCATACGCACAAATTTGTTTGTGCCCTGAGCATGTTTATGTTTATGTGTTGAGCTCAGAGTCTTTAAGATGGCCCACTGTTGGGAGGTATAAAGTTGATATAGCATCATTTGAGTCATTGGCATTGCCAGAATTGCAGGTAATATGGGTTGAAAAAGATACAGATCTGTTCATCATAGACGAGGTTGGGAAGATGGAATTGTTTAGTTCATCATTTTTTCCGGCAGTTCTTAAGGTTTTGGAATCAAATACTCCAGTTTTGGCTTCAATTCCCATCCCCAAGTCTGGACGGGATATACCTGGAGGAACAGTTGCAAGGCTGAGAAATCATCCAGAGGCAAATATATTTACGTTGAATCCAAGTAATAGGGATGGTGCTACAGAGCAAGTTCATGCCCAACTGTTGAACATCCTGGAACAGCAGCATCAGCAGCATTAGCTGTTCTACTTTTAAGTAAGTTTTAGGGCAGGGCAGGGCATGTCTAAACTTGTGATAAGTTGGTGGCGGATCTAAATCTTCAAGGATCTTTATGATTTCAAATTTATGTACTGTTTGTTGGATTTTACAGTGGTTTATATTTATGATTACCCAGCTTAGTGCTAACCATTTCGATGAACATGCAAAGCCACTGGTAAATGTCCTATGTAAGTGGAAATTTTGCTACAATAATTTTAGATTTGGAGGAGCTACATAGAATTTCAAGTTAA ATGGGAGGGCCAGGGCGGTGCTTGCTGGTTACGGGGCCTCCGGTAAGCTTTTGCCCCGCCGCTGTGGGCAAAACCACTCTGATCGTCAGGGTATTTGAGATGCTTAAAGCCTCTAACCCTAACTTGAAGATCAAAGGCTTCTATACTCGAGAAGTCAGGCAAGGAAGCCAGCGTGTTGGCTTTGAAGTCGTTACCTTAGATGGCCGAACATCTCCCCTTGCTTCGACCTCTGTGTCCAGTCTTCAAAGTTCATACGCACAAATTTGTTTGTGCCCTGAGCATGTTTATGTTTATGTGTTGAGCTCAGAGTCTTTAAGATGGCCCACTGTTGGGAGGTATAAAGTTGATATAGCATCATTTGAGTCATTGGCATTGCCAGAATTGCAGGTAATATGGGTTGAAAAAGATACAGATCTGTTCATCATAGACGAGGTTGGGAAGATGGAATTGTTTAGTTCATCATTTTTTCCGGCAGTTCTTAAGGTTTTGGAATCAAATACTCCAGTTTTGGCTTCAATTCCCATCCCCAAGTCTGGACGGGATATACCTGGAGGAACAGTTGCAAGGCTGAGAAATCATCCAGAGGCAAATATATTTACGTTGAATCCAAGTAATAGGGATGGTGCTACAGAGCAAGTTCATGCCCAACTGTTGAACATCCTGGAACAGCAGCATCAGCAGCATTAG
BLAST of CmoCh06G001470 vs. Swiss-Prot
Match: NTPCR_BOVIN (Cancer-related nucleoside-triphosphatase homolog OS=Bos taurus GN=NTPCR PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 8.2e-24 Identity = 79/205 (38.54%), Postives = 104/205 (50.73%), Query Frame = 1
BLAST of CmoCh06G001470 vs. Swiss-Prot
Match: NTPCR_HUMAN (Cancer-related nucleoside-triphosphatase OS=Homo sapiens GN=NTPCR PE=1 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 5.3e-23 Identity = 76/205 (37.07%), Postives = 104/205 (50.73%), Query Frame = 1
BLAST of CmoCh06G001470 vs. Swiss-Prot
Match: NTPCR_MOUSE (Cancer-related nucleoside-triphosphatase homolog OS=Mus musculus GN=Ntpcr PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.5e-20 Identity = 78/215 (36.28%), Postives = 108/215 (50.23%), Query Frame = 1
BLAST of CmoCh06G001470 vs. Swiss-Prot
Match: NTPTH_THEMA (Nucleoside-triphosphatase THEP1 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_0036 PE=3 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.9e-18 Identity = 68/206 (33.01%), Postives = 102/206 (49.51%), Query Frame = 1
BLAST of CmoCh06G001470 vs. Swiss-Prot
Match: NTPTH_THESQ (Nucleoside-triphosphatase THEP1 OS=Thermotoga sp. (strain RQ2) GN=TRQ2_0909 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.6e-17 Identity = 68/206 (33.01%), Postives = 101/206 (49.03%), Query Frame = 1
BLAST of CmoCh06G001470 vs. TrEMBL
Match: A0A0A0L3K2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002300 PE=3 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 2.4e-83 Identity = 174/224 (77.68%), Postives = 184/224 (82.14%), Query Frame = 1
BLAST of CmoCh06G001470 vs. TrEMBL
Match: M5VS19_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011922mg PE=3 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 9.0e-70 Identity = 146/224 (65.18%), Postives = 172/224 (76.79%), Query Frame = 1
BLAST of CmoCh06G001470 vs. TrEMBL
Match: A0A067L986_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22395 PE=3 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 9.0e-70 Identity = 152/224 (67.86%), Postives = 170/224 (75.89%), Query Frame = 1
BLAST of CmoCh06G001470 vs. TrEMBL
Match: A0A059ARC2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02225 PE=3 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 1.5e-69 Identity = 145/224 (64.73%), Postives = 173/224 (77.23%), Query Frame = 1
BLAST of CmoCh06G001470 vs. TrEMBL
Match: B9S6V1_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_0874350 PE=3 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.6e-69 Identity = 145/221 (65.61%), Postives = 170/221 (76.92%), Query Frame = 1
BLAST of CmoCh06G001470 vs. TAIR10
Match: AT5G66005.3 (AT5G66005.3 Expressed protein) HSP 1 Score: 229.6 bits (584), Expect = 2.0e-60 Identity = 126/213 (59.15%), Postives = 153/213 (71.83%), Query Frame = 1
BLAST of CmoCh06G001470 vs. NCBI nr
Match: gi|659095239|ref|XP_008448475.1| (PREDICTED: cancer-related nucleoside-triphosphatase homolog isoform X2 [Cucumis melo]) HSP 1 Score: 328.2 bits (840), Expect = 1.2e-86 Identity = 179/226 (79.20%), Postives = 188/226 (83.19%), Query Frame = 1
BLAST of CmoCh06G001470 vs. NCBI nr
Match: gi|449456875|ref|XP_004146174.1| (PREDICTED: cancer-related nucleoside-triphosphatase homolog [Cucumis sativus]) HSP 1 Score: 316.6 bits (810), Expect = 3.5e-83 Identity = 174/224 (77.68%), Postives = 184/224 (82.14%), Query Frame = 1
BLAST of CmoCh06G001470 vs. NCBI nr
Match: gi|659095235|ref|XP_008448472.1| (PREDICTED: cancer-related nucleoside-triphosphatase isoform X1 [Cucumis melo]) HSP 1 Score: 314.7 bits (805), Expect = 1.3e-82 Identity = 179/250 (71.60%), Postives = 188/250 (75.20%), Query Frame = 1
BLAST of CmoCh06G001470 vs. NCBI nr
Match: gi|802555369|ref|XP_012065396.1| (PREDICTED: cancer-related nucleoside-triphosphatase [Jatropha curcas]) HSP 1 Score: 271.6 bits (693), Expect = 1.3e-69 Identity = 152/224 (67.86%), Postives = 170/224 (75.89%), Query Frame = 1
BLAST of CmoCh06G001470 vs. NCBI nr
Match: gi|595807527|ref|XP_007202622.1| (hypothetical protein PRUPE_ppa011922mg [Prunus persica]) HSP 1 Score: 271.6 bits (693), Expect = 1.3e-69 Identity = 146/224 (65.18%), Postives = 172/224 (76.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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