CmoCh06G000680 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCGAAACAAAGACTATTGTTTTAACTCCATTCTTCTTCGAGATCTTTTCGATGTTCTTCGCCGATTCCATCCTTCTTCGGAATCCTCGTATCTTCTTCCAATTCCCTCTACATCGAGCTATTGAATGATCGTTGTAAATCTTTCCTTTTTGATTCTTCGACGGTTCGTTGTAATGGCAGAAAACCCTAAATGATCGTGTTTATTGCTTGTTGATTCTCTTCCGTGTGACACGAGCTTTGGATTCTGCATTAAATTGTGCTGATTTAGTTGAATTCGGGCGTTTTGTGCCTTGATTCCCGATGGAGAACGAACATGAATCTGCTTCAAGTTCAGCTCTTGCCTGGCGTTGGACCGTCGAAGCCCTTGCAAGTTTCAAGGAAGTGAAACACTCTCTATTACGTGGTACTCACTGTCAATTCTTTAGATCCTTTAGAGTCAAATTATTATTGTATAACTCAGCGTTCTATCTTTTTACAGATGTAATTGATGAGGGTAAAGAATTACCTGAGGTTACAAGAAAGAACGCTGGGGAAATGATTGCTTTGAGATGCTTGGAGGGTTTGTTTGGCCCTTTAAATTACAGTGGAGAAAATGGCCCTCCTGCTGAACAATCAAAAGTTATGTTCGATTCATCTGAGTGCTGTGAAGATGTTCTTAAACGCGTATGTAAGGAGGTAATACTTCTTCAAAATTTTGTTGTAGATTTCTGATTTCCTAGCCCTATGGTGCATTGTGTTTAGGAAGCGAACTGAGCCTGATTATCTCCATATCAGATAGATACATCCTGGCTTTCAAGAAATGGGTATGCATTGACATAGAATTTTGTTTTTTGCTGTTGTTATTAGACTTCAAAATCTGCCTTAAGAGTGGCTGAACCAGATATGTCAAAATGGGATGTTAGTCCCTTTATTGCACAAAAAAGAGCATCCATGAGGTGTACATTGCTTCAGGTGAAAACAATTCATGACTTGTCTCTACTCTCTACTTTATTTGCTCCCATCCTTTTTCGAATGTATGGCCATTTGTGAAGTTGTTGTTTTGTTTCTGTTTGTACAGCTGCAAGATTCAATTCTTGATGGTACACATCCATATGCTGATTTCTTAATGCAGAAGAGTGGGTTGATGCCCGTAAAAAAGCAGGATAGGATTTTTCTGAATAACGGTGATCTTAACAAGCGCTGCAGGAGACTAGATACTAGCTCTTCTGATCCTCAAGCTCAAAAAGAAAAAAGCAGAGGAAGCCCTGTACTGCTTGAGGAAGAAAGAAGAAGACTGTCTGTGGCAGACCCATCTACTTCTAGTTTGTTACCATCTAAAAGGAGTATTGTTGATTTAACATCTGAAGATGAGGCAAGACAGTTACTTGGTTGTAATGATGGTTACGTGAATGCTAAGAGGCGTAAGGTGCTTGATGCACATACTTCGCATTCAGGACATGAAGTGGCTTCTTCACATGGAGCTGAGGTGTTTGAAGCTTCACCTGAAATAGTTGTGCCACAAGAGAGAGATGATATTGATCATCAGATGACTTCCGTGGAAGACAAAGTTGTAGAGGAGGAGTATTTTGGGTCAAAGAAGTCAGGACAGTATACTGCTACTGATGAATTGCATCAGGTTGAATCAAGTACTCCTTGTTATACTAAGTTGCGACCTTCACTAGATGTTGAGATGGATGAAGTTATTAGTTTGGAGAAATCAAAAGATGGAAATGAACTGCCAGTTGAACAAAAAGCATCTAATAATTCTCCTGTTGAAGGCAACCTGCATGATATCATCACCGGTGATTCCGAGCATGACTTCGGGGTTGATAATCATGTAAATGAAATGAACACTCTTTCTCATTGTGGATTCCTGCCGAAGACCGTTGATACCGATATTGATGTTGGCATGAATCCCGATGAGGAAGAGAAAGATATGTTAAGTGATAGTGATGGATACCATAATCGAACGATTGCAGCGAAAAAGAAAGAATTTATTAGTTCTCAATGTATGGCAGATCGTGATTCTTTTCTATTAGCTGAGGGGAGCGTTTGTGTGAAATGTAATGAAGGTGGTCAGTTATTGTCCTGTAATGGTAGTGGTTGTCCTTTGGTGGTTCATGATAAGTGCTTGGATTCCTCAGCTAGGATGCATGGTGAAGGCGGTTTTAGTTGTCCATTCTGCTTATGCTCACTTGCTATATCAGAATACCTTGAAGCTAAGAAGAATGCTGCATTGGCAAAGAAAAATATTGCTACCTTTTTTCGTACTTGTTTGGGACATCACTCGATAGTTATTCAAGAGGCATTGCAACAAAAAGATCTTGATCCTTCACGAAATGCTAGAGTTGAGGATGCTGCTAAAATTAGTGAACAACACTTGGAAAATCAAGACAATCAAGTAACTCTAGATGGAGAACATGTAAAGGAAGCTGTTAACCATCAATCCGCGACAGTTACAGATATTGAGGGAAGAATAGAGCTGTCAAAGCCATTGCATATTCCTAATTCCAATCACCGAGAAAACGAGGCAAGTTCTTCGAGAGTTGCACCTGATGTTTTATCTGGAGAGAAAGACGGCGATGAATTGGTGAACCAAGAGTGTCTAGGAGATGTTGCAGAACTGAAAGATGGTCTAGAAGCCACAGAGCAACATGACATTTATGATACTCTCCACGAAGATCAAGGGCCAGTTGAAGCAGCGGCTATGCAAGAAGGTTTACAGTATCATACTGATGACAAGGAAGAGGAACCTTCTTATGCTATAAATATAGGAGGAGAAAAATATTCTGATGATGATGACAATGATCAGTCTATCATTTCTAGATATTCCATAAGGTTTCGACGGAAATATCATCAGTTAGTTTCTTCATACTTCTGTGGTAGTTAGTTTCTATTTGCTATTACCCTCCATTCCTGTTTTGGTTTAGGCTAACTGTGAATTCTTCAAGTAGGGAATAATGGTGATTTTTTCGATATGGTCTTAACGAATCACTCTTTCAAGAACACAAACGCCCTATTATGGAAAAATTTCATCATGGCTTTCTTTTCGAATCTGTGAAAAGAAAAAAATCAGAGAATATTTGCAGAAAAGGCACAGACCTACACAAAAGTTATATCTTGGTGTAAACGGTAGATATTGGAAAGGTCTTTTGTAAACACCACGGATTATTCACCCCTCTCGTAAATTTTGAAATTGTCTCTGGAATACTTGTGTAAGCCTGAATAGTATCCATAATAAATTAGTGGGATAAAAACTCACATGTTCCATCTATGGGGCACCTTGCATCAAAGAAGTGATAGATTTCACAATCATCGATGAACTTTTTGCTCCTTCGTTTGGGCGAGCAAGTTGTTGTATGACTTTGGGGAGAAATTATTTGAGAAGGGTTTCAACGCGGTAAACGGTCTTGTACCATCGTAATTTATGCTAGTTTTTGAACTTAAATAGAGGGTAGGATGTGGTTATAAGTAAGCATATTTTAGATGCACTATGATATTCGTTGTTATATGAGTAATGATTTGAGATTGAAACCATTAATCAGATGTGGATAACACGTGTTTCTTAGGTTTGGATGA GCGAAACAAAGACTATTGTTTTAACTCCATTCTTCTTCGAGATCTTTTCGATGTTCTTCGCCGATTCCATCCTTCTTCGGAATCCTCGTATCTTCTTCCAATTCCCTCTACATCGAGCTATTGAATGATCGTTGTAAATCTTTCCTTTTTGATTCTTCGACGGTTCGTTGTAATGGCAGAAAACCCTAAATGATCGTGTTTATTGCTTGTTGATTCTCTTCCGTGTGACACGAGCTTTGGATTCTGCATTAAATTGTGCTGATTTAGTTGAATTCGGGCGTTTTGTGCCTTGATTCCCGATGGAGAACGAACATGAATCTGCTTCAAGTTCAGCTCTTGCCTGGCGTTGGACCGTCGAAGCCCTTGCAAGTTTCAAGGAAGTGAAACACTCTCTATTACGTGATGTAATTGATGAGGGTAAAGAATTACCTGAGGTTACAAGAAAGAACGCTGGGGAAATGATTGCTTTGAGATGCTTGGAGGGTTTGTTTGGCCCTTTAAATTACAGTGGAGAAAATGGCCCTCCTGCTGAACAATCAAAAGTTATGTTCGATTCATCTGAGTGCTGTGAAGATGTTCTTAAACGCGTATGTAAGGAGACTTCAAAATCTGCCTTAAGAGTGGCTGAACCAGATATGTCAAAATGGGATGTTAGTCCCTTTATTGCACAAAAAAGAGCATCCATGAGGTGTACATTGCTTCAGCTGCAAGATTCAATTCTTGATGGTACACATCCATATGCTGATTTCTTAATGCAGAAGAGTGGGTTGATGCCCGTAAAAAAGCAGGATAGGATTTTTCTGAATAACGGTGATCTTAACAAGCGCTGCAGGAGACTAGATACTAGCTCTTCTGATCCTCAAGCTCAAAAAGAAAAAAGCAGAGGAAGCCCTGTACTGCTTGAGGAAGAAAGAAGAAGACTGTCTGTGGCAGACCCATCTACTTCTAGTTTGTTACCATCTAAAAGGAGTATTGTTGATTTAACATCTGAAGATGAGGCAAGACAGTTACTTGGTTGTAATGATGGTTACGTGAATGCTAAGAGGCGTAAGGTGCTTGATGCACATACTTCGCATTCAGGACATGAAGTGGCTTCTTCACATGGAGCTGAGGTGTTTGAAGCTTCACCTGAAATAGTTGTGCCACAAGAGAGAGATGATATTGATCATCAGATGACTTCCGTGGAAGACAAAGTTGTAGAGGAGGAGTATTTTGGGTCAAAGAAGTCAGGACAGTATACTGCTACTGATGAATTGCATCAGGTTGAATCAAGTACTCCTTGTTATACTAAGTTGCGACCTTCACTAGATGTTGAGATGGATGAAGTTATTAGTTTGGAGAAATCAAAAGATGGAAATGAACTGCCAGTTGAACAAAAAGCATCTAATAATTCTCCTGTTGAAGGCAACCTGCATGATATCATCACCGGTGATTCCGAGCATGACTTCGGGGTTGATAATCATGTAAATGAAATGAACACTCTTTCTCATTGTGGATTCCTGCCGAAGACCGTTGATACCGATATTGATGTTGGCATGAATCCCGATGAGGAAGAGAAAGATATGTTAAGTGATAGTGATGGATACCATAATCGAACGATTGCAGCGAAAAAGAAAGAATTTATTAGTTCTCAATGTATGGCAGATCGTGATTCTTTTCTATTAGCTGAGGGGAGCGTTTGTGTGAAATGTAATGAAGGTGGTCAGTTATTGTCCTGTAATGGTAGTGGTTGTCCTTTGGTGGTTCATGATAAGTGCTTGGATTCCTCAGCTAGGATGCATGGTGAAGGCGGTTTTAGTTGTCCATTCTGCTTATGCTCACTTGCTATATCAGAATACCTTGAAGCTAAGAAGAATGCTGCATTGGCAAAGAAAAATATTGCTACCTTTTTTCGTACTTGTTTGGGACATCACTCGATAGTTATTCAAGAGGCATTGCAACAAAAAGATCTTGATCCTTCACGAAATGCTAGAGTTGAGGATGCTGCTAAAATTAGTGAACAACACTTGGAAAATCAAGACAATCAAGTAACTCTAGATGGAGAACATGTAAAGGAAGCTGTTAACCATCAATCCGCGACAGTTACAGATATTGAGGGAAGAATAGAGCTGTCAAAGCCATTGCATATTCCTAATTCCAATCACCGAGAAAACGAGGCAAGTTCTTCGAGAGTTGCACCTGATGTTTTATCTGGAGAGAAAGACGGCGATGAATTGGTGAACCAAGAGTGTCTAGGAGATGTTGCAGAACTGAAAGATGGTCTAGAAGCCACAGAGCAACATGACATTTATGATACTCTCCACGAAGATCAAGGGCCAGTTGAAGCAGCGGCTATGCAAGAAGGTTTACAGTATCATACTGATGACAAGGAAGAGGAACCTTCTTATGCTATAAATATAGGAGGAGAAAAATATTCTGATGATGATGACAATGATCAGTCTATCATTTCTAGATATTCCATAAGGTTTCGACGGAAATATCATCAGTTTGGATGA ATGGAGAACGAACATGAATCTGCTTCAAGTTCAGCTCTTGCCTGGCGTTGGACCGTCGAAGCCCTTGCAAGTTTCAAGGAAGTGAAACACTCTCTATTACGTGATGTAATTGATGAGGGTAAAGAATTACCTGAGGTTACAAGAAAGAACGCTGGGGAAATGATTGCTTTGAGATGCTTGGAGGGTTTGTTTGGCCCTTTAAATTACAGTGGAGAAAATGGCCCTCCTGCTGAACAATCAAAAGTTATGTTCGATTCATCTGAGTGCTGTGAAGATGTTCTTAAACGCGTATGTAAGGAGACTTCAAAATCTGCCTTAAGAGTGGCTGAACCAGATATGTCAAAATGGGATGTTAGTCCCTTTATTGCACAAAAAAGAGCATCCATGAGGTGTACATTGCTTCAGCTGCAAGATTCAATTCTTGATGGTACACATCCATATGCTGATTTCTTAATGCAGAAGAGTGGGTTGATGCCCGTAAAAAAGCAGGATAGGATTTTTCTGAATAACGGTGATCTTAACAAGCGCTGCAGGAGACTAGATACTAGCTCTTCTGATCCTCAAGCTCAAAAAGAAAAAAGCAGAGGAAGCCCTGTACTGCTTGAGGAAGAAAGAAGAAGACTGTCTGTGGCAGACCCATCTACTTCTAGTTTGTTACCATCTAAAAGGAGTATTGTTGATTTAACATCTGAAGATGAGGCAAGACAGTTACTTGGTTGTAATGATGGTTACGTGAATGCTAAGAGGCGTAAGGTGCTTGATGCACATACTTCGCATTCAGGACATGAAGTGGCTTCTTCACATGGAGCTGAGGTGTTTGAAGCTTCACCTGAAATAGTTGTGCCACAAGAGAGAGATGATATTGATCATCAGATGACTTCCGTGGAAGACAAAGTTGTAGAGGAGGAGTATTTTGGGTCAAAGAAGTCAGGACAGTATACTGCTACTGATGAATTGCATCAGGTTGAATCAAGTACTCCTTGTTATACTAAGTTGCGACCTTCACTAGATGTTGAGATGGATGAAGTTATTAGTTTGGAGAAATCAAAAGATGGAAATGAACTGCCAGTTGAACAAAAAGCATCTAATAATTCTCCTGTTGAAGGCAACCTGCATGATATCATCACCGGTGATTCCGAGCATGACTTCGGGGTTGATAATCATGTAAATGAAATGAACACTCTTTCTCATTGTGGATTCCTGCCGAAGACCGTTGATACCGATATTGATGTTGGCATGAATCCCGATGAGGAAGAGAAAGATATGTTAAGTGATAGTGATGGATACCATAATCGAACGATTGCAGCGAAAAAGAAAGAATTTATTAGTTCTCAATGTATGGCAGATCGTGATTCTTTTCTATTAGCTGAGGGGAGCGTTTGTGTGAAATGTAATGAAGGTGGTCAGTTATTGTCCTGTAATGGTAGTGGTTGTCCTTTGGTGGTTCATGATAAGTGCTTGGATTCCTCAGCTAGGATGCATGGTGAAGGCGGTTTTAGTTGTCCATTCTGCTTATGCTCACTTGCTATATCAGAATACCTTGAAGCTAAGAAGAATGCTGCATTGGCAAAGAAAAATATTGCTACCTTTTTTCGTACTTGTTTGGGACATCACTCGATAGTTATTCAAGAGGCATTGCAACAAAAAGATCTTGATCCTTCACGAAATGCTAGAGTTGAGGATGCTGCTAAAATTAGTGAACAACACTTGGAAAATCAAGACAATCAAGTAACTCTAGATGGAGAACATGTAAAGGAAGCTGTTAACCATCAATCCGCGACAGTTACAGATATTGAGGGAAGAATAGAGCTGTCAAAGCCATTGCATATTCCTAATTCCAATCACCGAGAAAACGAGGCAAGTTCTTCGAGAGTTGCACCTGATGTTTTATCTGGAGAGAAAGACGGCGATGAATTGGTGAACCAAGAGTGTCTAGGAGATGTTGCAGAACTGAAAGATGGTCTAGAAGCCACAGAGCAACATGACATTTATGATACTCTCCACGAAGATCAAGGGCCAGTTGAAGCAGCGGCTATGCAAGAAGGTTTACAGTATCATACTGATGACAAGGAAGAGGAACCTTCTTATGCTATAAATATAGGAGGAGAAAAATATTCTGATGATGATGACAATGATCAGTCTATCATTTCTAGATATTCCATAAGGTTTCGACGGAAATATCATCAGTTTGGATGA
BLAST of CmoCh06G000680 vs. TrEMBL
Match: A0A0A0LH18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G812180 PE=4 SV=1) HSP 1 Score: 488.8 bits (1257), Expect = 1.1e-134 Identity = 284/480 (59.17%), Postives = 333/480 (69.38%), Query Frame = 1
BLAST of CmoCh06G000680 vs. TrEMBL
Match: V4S792_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004349mg PE=4 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 7.1e-68 Identity = 249/767 (32.46%), Postives = 369/767 (48.11%), Query Frame = 1
BLAST of CmoCh06G000680 vs. TrEMBL
Match: A0A067DRC6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0037502mg PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.6e-67 Identity = 249/767 (32.46%), Postives = 368/767 (47.98%), Query Frame = 1
BLAST of CmoCh06G000680 vs. TrEMBL
Match: B9SL53_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0089480 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 3.0e-66 Identity = 232/750 (30.93%), Postives = 363/750 (48.40%), Query Frame = 1
BLAST of CmoCh06G000680 vs. TrEMBL
Match: M5WWX5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021429mg PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 1.3e-64 Identity = 212/586 (36.18%), Postives = 294/586 (50.17%), Query Frame = 1
BLAST of CmoCh06G000680 vs. TAIR10
Match: AT1G68030.1 (AT1G68030.1 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 72.4 bits (176), Expect = 1.3e-12 Identity = 69/251 (27.49%), Postives = 111/251 (44.22%), Query Frame = 1
BLAST of CmoCh06G000680 vs. NCBI nr
Match: gi|659084876|ref|XP_008443120.1| (PREDICTED: uncharacterized protein LOC103486808 isoform X1 [Cucumis melo]) HSP 1 Score: 499.2 bits (1284), Expect = 1.2e-137 Identity = 291/502 (57.97%), Postives = 342/502 (68.13%), Query Frame = 1
BLAST of CmoCh06G000680 vs. NCBI nr
Match: gi|659084883|ref|XP_008443123.1| (PREDICTED: uncharacterized protein LOC103486808 isoform X2 [Cucumis melo]) HSP 1 Score: 495.4 bits (1274), Expect = 1.8e-136 Identity = 288/491 (58.66%), Postives = 338/491 (68.84%), Query Frame = 1
BLAST of CmoCh06G000680 vs. NCBI nr
Match: gi|700204213|gb|KGN59346.1| (hypothetical protein Csa_3G812180 [Cucumis sativus]) HSP 1 Score: 488.8 bits (1257), Expect = 1.6e-134 Identity = 284/480 (59.17%), Postives = 333/480 (69.38%), Query Frame = 1
BLAST of CmoCh06G000680 vs. NCBI nr
Match: gi|778684929|ref|XP_011652124.1| (PREDICTED: uncharacterized protein LOC101206592 [Cucumis sativus]) HSP 1 Score: 486.9 bits (1252), Expect = 6.3e-134 Identity = 283/479 (59.08%), Postives = 332/479 (69.31%), Query Frame = 1
BLAST of CmoCh06G000680 vs. NCBI nr
Match: gi|1009161638|ref|XP_015899006.1| (PREDICTED: uncharacterized protein LOC107432393 [Ziziphus jujuba]) HSP 1 Score: 325.9 bits (834), Expect = 1.8e-85 Identity = 261/769 (33.94%), Postives = 390/769 (50.72%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|