CmoCh05G012290 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G012290
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Wound-induced protein
Location	Cmo_Chr05 : 9604878 .. 9606195 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACAAAGGGTTTGATGCTGATAACGTTGTCGTGTCTATGTCTTGTAATGTTGTCCAAAGCTCAAAGTGTGAGCAACGTGAGGGCAACATTTAACTTGTACAATGCCCCCGAAATCAATTGGGACTTGAACGCTGTGAGTGCATTTTGTTCCACATGGGATGCCGACCAGCCTTTGGAGTGGCGCAGCCAATATGGATGGACTGCCTTTTGTGGCCCCGTTGGACCTCAAGGCGAGGACTCTTGTGGCCTATGCTTACTGGTACGAGTATTTCGAATGACTTTTTAAGTGCTTAAAAATATATTTTTGTGTTTATGAACGTACTTCGAAAGATATTCTGACAGGCTCGTAATGATGTTCGGTTGGATGATAGAACCTTTAACCTTTTGCATACGTAAAAAATTCGGGTTTTTTTTTTTTTTTGTTTTATGGATAATGTACTTGCATTATCGTTATATAGATGAATTATATCGAGATAATGGGGTAGGTATATAACAGCTCAAGTCACCGCTAGCAGATATTATCCTTTTTGGGCTTTCTTCTTCAGGCTTCCTCTCGAAGTTTTTAAAACGCGTCTATTCATGAGAGATTTCCACACTCTTATAAAGAATGTTTCGTTCTCTCCTCTAACCACCGTTGTGGGATCTCACAATCCTCACCCTTATAAAGAATATATAATGTTTATAACTGATGTTAATGATGTGTGACGGGTGAATGTTTAATATTTGAATTTTATGAAAATTTAGTTAATAATGAGACATGCATAAGTAATATTTTTTAAAATAATTATAAAAAAAACCAACCAATCAACCTTAATCCAACCCAAAAAATAGGAGGTTAGGTTGAGAACACTGTTCGAGTTGCTCGAGTCACCAGCTCAACCAGCTTAAAATTTCTGGTGGGTCTAAATGATTTCCGAATTCAACCCAACAAGTATACAACCCTATAATGTGAATTTGTCACTCCCTCACTGTACCATTGTAATTGTTACTTTAATACGAGAGTAAAGTATCGATCTTTATAATATGAACATAACTCAACTAATTAAAACATATATCGATTAAGAAGTCGAAAATTTGAATCGAGCGTTAGTTGCATGAAAAAATTATAATAGTTCGTCTAATAGTGAAAAAAATACATGAACATGCAGGTGACTAACACGGAAACAGGCGCTCAACAAATCGTAAGAATTGTGGATCAATGTAACAACGGAGGTCTAGATTTAGACGTCGGAGTGTTTCAAAGTCTCGACACGGATGGAAATGGCAATGCTAATGGCTTTCTCACAGTCGACTATGATTTTGTGAATTGTTGA

mRNA sequence

ATGGAGACAAAGGGTTTGATGCTGATAACGTTGTCGTGTCTATGTCTTGTAATGTTGTCCAAAGCTCAAAGTGTGAGCAACGTGAGGGCAACATTTAACTTGTACAATGCCCCCGAAATCAATTGGGACTTGAACGCTGTGAGTGCATTTTGTTCCACATGGGATGCCGACCAGCCTTTGGAGTGGCGCAGCCAATATGGATGGACTGCCTTTTGTGGCCCCGTTGGACCTCAAGGCGAGGACTCTTGTGGCCTATGCTTACTGGTACGAGTGACTAACACGGAAACAGGCGCTCAACAAATCGTAAGAATTGTGGATCAATGTAACAACGGAGGTCTAGATTTAGACGTCGGAGTGTTTCAAAGTCTCGACACGGATGGAAATGGCAATGCTAATGGCTTTCTCACAGTCGACTATGATTTTGTGAATTGTTGA

Coding sequence (CDS)

ATGGAGACAAAGGGTTTGATGCTGATAACGTTGTCGTGTCTATGTCTTGTAATGTTGTCCAAAGCTCAAAGTGTGAGCAACGTGAGGGCAACATTTAACTTGTACAATGCCCCCGAAATCAATTGGGACTTGAACGCTGTGAGTGCATTTTGTTCCACATGGGATGCCGACCAGCCTTTGGAGTGGCGCAGCCAATATGGATGGACTGCCTTTTGTGGCCCCGTTGGACCTCAAGGCGAGGACTCTTGTGGCCTATGCTTACTGGTACGAGTGACTAACACGGAAACAGGCGCTCAACAAATCGTAAGAATTGTGGATCAATGTAACAACGGAGGTCTAGATTTAGACGTCGGAGTGTTTCAAAGTCTCGACACGGATGGAAATGGCAATGCTAATGGCTTTCTCACAGTCGACTATGATTTTGTGAATTGTTGA

Homology

[Close]

BLAST of CmoCh05G012290 vs. Swiss-Prot
Match: WIN1_SOLTU (Wound-induced protein WIN1 OS=Solanum tuberosum GN=WIN1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.9e-48
Identity = 85/121 (70.25%), Postives = 99/121 (81.82%), Query Frame = 1


Query: 24  SVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQGEDSC 83
           S  NVRAT+++YN   + WDLNAVSA+CSTWDA++PL WR +YGWTAFCGPVGP+G DSC
Sbjct: 79  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSC 138

Query: 84  GLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTVDYDFVN 143
           G CL  RVTNT TGAQ  VRIVDQC+NGGLDLDV VF+ +DTDGNGN  G L V+Y FV+
Sbjct: 139 GKCL--RVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVD 197

Query: 144 C 145
           C
Sbjct: 199 C 197

[Close]

BLAST of CmoCh05G012290 vs. Swiss-Prot
Match: WIN2_SOLTU (Wound-induced protein WIN2 OS=Solanum tuberosum GN=WIN2 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 6.7e-48
Identity = 85/121 (70.25%), Postives = 98/121 (80.99%), Query Frame = 1


Query: 24  SVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQGEDSC 83
           S  NVRAT+++YN   + WDLNAVSA+CSTWDA++P  WRS+YGWTAFCGPVGP+G DSC
Sbjct: 78  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSC 137

Query: 84  GLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTVDYDFVN 143
           G CL  RVTNT TGAQ  VRIVDQC+NGGLDLD+ VFQ +DTDG GN  G L V+Y FVN
Sbjct: 138 GKCL--RVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVN 196

Query: 144 C 145
           C
Sbjct: 198 C 196

[Close]

BLAST of CmoCh05G012290 vs. Swiss-Prot
Match: PR4A_TOBAC (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.5e-47
Identity = 89/139 (64.03%), Postives = 108/139 (77.70%), Query Frame = 1


Query: 7   MLITLSCLCLVM-LSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQ 66
           + + L  + +VM ++ AQS +NVR+T++LYN   INWDL A SAFC+TWDAD+PL WR +
Sbjct: 9   LCVALLIISMVMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 67  YGWTAFCGPVGPQGEDSCGLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDT 126
           YGWTAFCGP GP+G+DSCG CL  RVTNT TG Q  VRIVDQC+NGGLDLDV VF  LDT
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCL--RVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDT 128

Query: 127 DGNGNANGFLTVDYDFVNC 145
           +G G   G LTV+Y+FVNC
Sbjct: 129 NGVGYQQGHLTVNYEFVNC 145

[Close]

BLAST of CmoCh05G012290 vs. Swiss-Prot
Match: PR4B_TOBAC (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.3e-47
Identity = 85/129 (65.89%), Postives = 102/129 (79.07%), Query Frame = 1


Query: 16  LVMLSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPV 75
           ++ ++ AQS +NVR+T++LYN   INWDL A SAFC+TWDAD+PL WR +YGWTAFCGP 
Sbjct: 19  MMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQKYGWTAFCGPA 78

Query: 76  GPQGEDSCGLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFL 135
           GP+G+DSCG CL  RVTNT TG Q  VRIVDQC+NGGLDLDV VF  LDT+G G   G L
Sbjct: 79  GPRGQDSCGRCL--RVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNGLGYQQGHL 138

Query: 136 TVDYDFVNC 145
            V+Y+FVNC
Sbjct: 139 IVNYEFVNC 145

[Close]

BLAST of CmoCh05G012290 vs. Swiss-Prot
Match: PRP2_SOLLC (Pathogenesis-related protein P2 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.4e-45
Identity = 83/129 (64.34%), Postives = 99/129 (76.74%), Query Frame = 1


Query: 16  LVMLSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPV 75
           ++ ++ AQS +NVRAT++LYN   INWDL   S +C+TWDAD+PLEWR +YGWTAFCGP 
Sbjct: 17  MMAVAAAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPA 76

Query: 76  GPQGEDSCGLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFL 135
           GP G+ SCG CL  RVTNT TG Q+ VRIVDQC NGGLDLDV VF  LDT+G G   G L
Sbjct: 77  GPTGQASCGRCL--RVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNL 136

Query: 136 TVDYDFVNC 145
            V+Y+FVNC
Sbjct: 137 NVNYEFVNC 143

[Close]

BLAST of CmoCh05G012290 vs. TrEMBL
Match: A0A0A0LG74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010340 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 7.7e-59
Identity = 109/126 (86.51%), Postives = 118/126 (93.65%), Query Frame = 1


Query: 19  LSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQ 78
           +SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA+QPLEWRSQYGWTAFCGP+GP 
Sbjct: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPL 60

Query: 79  GEDSCGLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTVD 138
           G+ SCGLCLL  VTN +TGAQQ VRIVDQC+NGGLDLDVGVFQSLDTDGNG ANGFLT++
Sbjct: 61  GQHSCGLCLL--VTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMN 120

Query: 139 YDFVNC 145
           YDFVNC
Sbjct: 121 YDFVNC 124

[Close]

BLAST of CmoCh05G012290 vs. TrEMBL
Match: A0A088NF29_9FABA (Pseudo-hevein (Fragment) OS=Dipteryx odorata PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.2e-51
Identity = 97/139 (69.78%), Postives = 117/139 (84.17%), Query Frame = 1


Query: 6   LMLITLSCLCLVMLSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQ 65
           L L+ +S +C+V L+ AQS SNVRAT++LY   + NWDL AVSA+C+TWDA++PL WRS+
Sbjct: 4   LSLLVVSLVCVVALASAQSASNVRATYHLYQPEQHNWDLGAVSAYCATWDANKPLSWRSK 63

Query: 66  YGWTAFCGPVGPQGEDSCGLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDT 125
           YGWTAFCGPVGPQG+ +CG CL  +VTNT T AQQ VRIVDQC+NGGLDLD+GVFQ LDT
Sbjct: 64  YGWTAFCGPVGPQGQAACGKCL--KVTNTRTQAQQTVRIVDQCSNGGLDLDIGVFQKLDT 123

Query: 126 DGNGNANGFLTVDYDFVNC 145
           DGNGNA G LTV+YDFV+C
Sbjct: 124 DGNGNAQGHLTVNYDFVDC 140

[Close]

BLAST of CmoCh05G012290 vs. TrEMBL
Match: M5W1Q5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012991mg PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.9e-49
Identity = 94/140 (67.14%), Postives = 111/140 (79.29%), Query Frame = 1


Query: 5   GLMLITLSCLCLVMLSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRS 64
           G +L+T+  +C+V  + AQS SNVRAT+NLYN   INWDL   S FC+TWDAD+PL WRS
Sbjct: 7   GKVLLTMMIVCVVGSASAQSASNVRATYNLYNPQNINWDLRTASVFCATWDADKPLSWRS 66

Query: 65  QYGWTAFCGPVGPQGEDSCGLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLD 124
           +YGWTAFCGPVGP G+DSCG CLL  VTNT TGA+  VRIVDQC+NGGLDLDV VF  +D
Sbjct: 67  KYGWTAFCGPVGPTGQDSCGKCLL--VTNTGTGAKVTVRIVDQCSNGGLDLDVNVFNQID 126

Query: 125 TDGNGNANGFLTVDYDFVNC 145
           T+G GNA G L V+YDFV+C
Sbjct: 127 TNGQGNAQGHLIVNYDFVDC 144

[Close]

BLAST of CmoCh05G012290 vs. TrEMBL
Match: A0A0A0LIC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010390 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.6e-48
Identity = 93/139 (66.91%), Postives = 111/139 (79.86%), Query Frame = 1


Query: 6   LMLITLSCLCLVMLSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQ 65
           +M+I +  L ++ L+ AQS +NVRAT++LYN  +INWD    S FC+TWDAD+PLEWR Q
Sbjct: 6   IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQ 65

Query: 66  YGWTAFCGPVGPQGEDSCGLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDT 125
           YGWTAFCGPVGP+G DSCG CL  RVTNTETGA +IVRIVDQC NGGLDLDV VF+ +DT
Sbjct: 66  YGWTAFCGPVGPRGRDSCGRCL--RVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDT 125

Query: 126 DGNGNANGFLTVDYDFVNC 145
           +GNGN  G L V+Y FVNC
Sbjct: 126 NGNGNLRGHLIVNYQFVNC 142

[Close]

BLAST of CmoCh05G012290 vs. TrEMBL
Match: A0A072VY59_MEDTR (Chitinase / Hevein / PR-4 / Wheatwin2 OS=Medicago truncatula GN=MTR_1g080780 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.6e-48
Identity = 96/139 (69.06%), Postives = 114/139 (82.01%), Query Frame = 1


Query: 6   LMLITLSCLCLVMLSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQ 65
           L L  LS  C+++L+ AQS + V++TFNLYN  + NWDL AVSAFC+TWDADQPL WRS+
Sbjct: 4   LALCMLSLFCILVLATAQSAT-VQSTFNLYNPEQHNWDLRAVSAFCATWDADQPLSWRSK 63

Query: 66  YGWTAFCGPVGPQGEDSCGLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDT 125
           YGWTAFCGPVGPQG+ SCG CL  RVTNT+TG QQI RI+DQC+NGGLDLDVGVFQ LD+
Sbjct: 64  YGWTAFCGPVGPQGQASCGRCL--RVTNTKTGDQQIARIIDQCHNGGLDLDVGVFQRLDS 123

Query: 126 DGNGNANGFLTVDYDFVNC 145
           D +GNA G L V+Y FV+C
Sbjct: 124 DRSGNAQGHLIVNYAFVDC 139

[Close]

BLAST of CmoCh05G012290 vs. TAIR10
Match: AT3G04720.1 (AT3G04720.1 pathogenesis-related 4)

HSP 1 Score: 176.4 bits (446), Expect = 1.3e-44
Identity = 80/122 (65.57%), Postives = 93/122 (76.23%), Query Frame = 1


Query: 23  QSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQGEDS 82
           +S SNVRAT++ YN  + NWDL AVSA+CSTWDAD+P  WRS+YGWTAFCGP GP+G+ S
Sbjct: 72  ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQAS 131

Query: 83  CGLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTVDYDFV 142
           CG CL  RV NT T A   VRIVDQC+NGGLDLDV +F  +DTDG G   G L VDY FV
Sbjct: 132 CGKCL--RVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFV 191

Query: 143 NC 145
           +C
Sbjct: 192 DC 191

[Close]

BLAST of CmoCh05G012290 vs. NCBI nr
Match: gi|449442943|ref|XP_004139240.1| (PREDICTED: pathogenesis-related protein PR-4-like [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-62
Identity = 119/145 (82.07%), Postives = 130/145 (89.66%), Query Frame = 1


Query: 1   METKGLM-LITLSCLCLVMLSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQP 60
           ME K L+  + L C CLVM+SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA+QP
Sbjct: 1   MEKKSLVSFVMLLCSCLVMMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQP 60

Query: 61  LEWRSQYGWTAFCGPVGPQGEDSCGLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGV 120
           LEWRSQYGWTAFCGP+GP G+ SCGLCLL  VTN +TGAQQ VRIVDQC+NGGLDLDVGV
Sbjct: 61  LEWRSQYGWTAFCGPLGPLGQHSCGLCLL--VTNVQTGAQQTVRIVDQCSNGGLDLDVGV 120

Query: 121 FQSLDTDGNGNANGFLTVDYDFVNC 145
           FQSLDTDGNG ANGFLT++YDFVNC
Sbjct: 121 FQSLDTDGNGIANGFLTMNYDFVNC 143

[Close]

BLAST of CmoCh05G012290 vs. NCBI nr
Match: gi|700205679|gb|KGN60798.1| (hypothetical protein Csa_2G010340 [Cucumis sativus])

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-58
Identity = 109/126 (86.51%), Postives = 118/126 (93.65%), Query Frame = 1


Query: 19  LSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQYGWTAFCGPVGPQ 78
           +SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA+QPLEWRSQYGWTAFCGP+GP 
Sbjct: 1   MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPLGPL 60

Query: 79  GEDSCGLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDTDGNGNANGFLTVD 138
           G+ SCGLCLL  VTN +TGAQQ VRIVDQC+NGGLDLDVGVFQSLDTDGNG ANGFLT++
Sbjct: 61  GQHSCGLCLL--VTNVQTGAQQTVRIVDQCSNGGLDLDVGVFQSLDTDGNGIANGFLTMN 120

Query: 139 YDFVNC 145
           YDFVNC
Sbjct: 121 YDFVNC 124

[Close]

BLAST of CmoCh05G012290 vs. NCBI nr
Match: gi|684194203|gb|AIN56735.1| (pseudo-hevein, partial [Dipteryx odorata])

HSP 1 Score: 210.7 bits (535), Expect = 1.7e-51
Identity = 97/139 (69.78%), Postives = 117/139 (84.17%), Query Frame = 1


Query: 6   LMLITLSCLCLVMLSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRSQ 65
           L L+ +S +C+V L+ AQS SNVRAT++LY   + NWDL AVSA+C+TWDA++PL WRS+
Sbjct: 4   LSLLVVSLVCVVALASAQSASNVRATYHLYQPEQHNWDLGAVSAYCATWDANKPLSWRSK 63

Query: 66  YGWTAFCGPVGPQGEDSCGLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLDT 125
           YGWTAFCGPVGPQG+ +CG CL  +VTNT T AQQ VRIVDQC+NGGLDLD+GVFQ LDT
Sbjct: 64  YGWTAFCGPVGPQGQAACGKCL--KVTNTRTQAQQTVRIVDQCSNGGLDLDIGVFQKLDT 123

Query: 126 DGNGNANGFLTVDYDFVNC 145
           DGNGNA G LTV+YDFV+C
Sbjct: 124 DGNGNAQGHLTVNYDFVDC 140

[Close]

BLAST of CmoCh05G012290 vs. NCBI nr
Match: gi|645280296|ref|XP_008245121.1| (PREDICTED: pathogenesis-related protein PR-4-like [Prunus mume])

HSP 1 Score: 206.1 bits (523), Expect = 4.2e-50
Identity = 95/140 (67.86%), Postives = 111/140 (79.29%), Query Frame = 1


Query: 5   GLMLITLSCLCLVMLSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRS 64
           G +L+T+  +C+V  + AQS SNVRAT+NLYN   INWDL   S +C+TWDAD+PL WRS
Sbjct: 7   GKVLLTMMIVCVVGSASAQSASNVRATYNLYNPQNINWDLRTASVYCATWDADKPLSWRS 66

Query: 65  QYGWTAFCGPVGPQGEDSCGLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLD 124
           +YGWTAFCGPVGP G+DSCG CLL  VTNT TGA   VRIVDQC+NGGLDLDV VF  +D
Sbjct: 67  KYGWTAFCGPVGPTGQDSCGKCLL--VTNTGTGANVTVRIVDQCSNGGLDLDVNVFNQID 126

Query: 125 TDGNGNANGFLTVDYDFVNC 145
           TDG GNA G LTV+YDFV+C
Sbjct: 127 TDGKGNAQGHLTVNYDFVDC 144

[Close]

BLAST of CmoCh05G012290 vs. NCBI nr
Match: gi|645304835|ref|XP_008245943.1| (PREDICTED: pathogenesis-related protein PR-4 [Prunus mume])

HSP 1 Score: 204.9 bits (520), Expect = 9.4e-50
Identity = 94/140 (67.14%), Postives = 112/140 (80.00%), Query Frame = 1


Query: 5   GLMLITLSCLCLVMLSKAQSVSNVRATFNLYNAPEINWDLNAVSAFCSTWDADQPLEWRS 64
           G +L+T+  +C+V  + AQS SNVRAT+NLYN   INWDL   S +C+TWDAD+PL WRS
Sbjct: 7   GKVLLTMMIVCVVGSASAQSASNVRATYNLYNPQNINWDLRTASVYCATWDADKPLSWRS 66

Query: 65  QYGWTAFCGPVGPQGEDSCGLCLLVRVTNTETGAQQIVRIVDQCNNGGLDLDVGVFQSLD 124
           +YGWTAFCGPVGP G+DSCG CLL  VTNT TGA+  VRIVDQC+NGGLDLDV VF  +D
Sbjct: 67  KYGWTAFCGPVGPTGQDSCGKCLL--VTNTATGAKVTVRIVDQCSNGGLDLDVNVFNQID 126

Query: 125 TDGNGNANGFLTVDYDFVNC 145
           T+G GNA G LTV+YDFV+C
Sbjct: 127 TNGQGNAQGHLTVNYDFVDC 144

The following BLAST results are available for this feature:

BLAST of CmoCh05G012290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WIN1_SOLTU	3.9e-48	70.25	Wound-induced protein WIN1 OS=Solanum tuberosum GN=WIN1 PE=2 SV=1	[more]
WIN2_SOLTU	6.7e-48	70.25	Wound-induced protein WIN2 OS=Solanum tuberosum GN=WIN2 PE=2 SV=1	[more]
PR4A_TOBAC	1.5e-47	64.03	Pathogenesis-related protein PR-4A OS=Nicotiana tabacum PE=2 SV=1	[more]
PR4B_TOBAC	3.3e-47	65.89	Pathogenesis-related protein PR-4B OS=Nicotiana tabacum PE=2 SV=1	[more]
PRP2_SOLLC	1.4e-45	64.34	Pathogenesis-related protein P2 OS=Solanum lycopersicum PE=2 SV=1	[more]

BLAST of CmoCh05G012290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG74_CUCSA	7.7e-59	86.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010340 PE=4 SV=1	[more]
A0A088NF29_9FABA	1.2e-51	69.78	Pseudo-hevein (Fragment) OS=Dipteryx odorata PE=2 SV=1	[more]
M5W1Q5_PRUPE	1.9e-49	67.14	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012991mg PE=4 SV=1	[more]
A0A0A0LIC8_CUCSA	1.6e-48	66.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010390 PE=4 SV=1	[more]
A0A072VY59_MEDTR	1.6e-48	69.06	Chitinase / Hevein / PR-4 / Wheatwin2 OS=Medicago truncatula GN=MTR_1g080780 PE=...	[more]

BLAST of CmoCh05G012290 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04720.1	1.3e-44	65.57	pathogenesis-related 4	[more]

BLAST of CmoCh05G012290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442943\|ref\|XP_004139240.1\|	1.6e-62	82.07	PREDICTED: pathogenesis-related protein PR-4-like [Cucumis sativus]	[more]
gi\|700205679\|gb\|KGN60798.1\|	1.1e-58	86.51	hypothetical protein Csa_2G010340 [Cucumis sativus]	[more]
gi\|684194203\|gb\|AIN56735.1\|	1.7e-51	69.78	pseudo-hevein, partial [Dipteryx odorata]	[more]
gi\|645280296\|ref\|XP_008245121.1\|	4.2e-50	67.86	PREDICTED: pathogenesis-related protein PR-4-like [Prunus mume]	[more]
gi\|645304835\|ref\|XP_008245943.1\|	9.4e-50	67.14	PREDICTED: pathogenesis-related protein PR-4 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001153	Barwin_dom
IPR009009	RlpA-like_DPBB
IPR018226	Barwin_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0042742	defense response to bacterium
GO:0050832	defense response to fungus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G012290.1	CmoCh05G012290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001153	Barwin domain	PRODOM	PD004535		coord: 31..144 score: 6.0
IPR001153	Barwin domain	PRINTS	PR00602	BARWIN	coord: 58..76 score: 2.0E-22coord: 119..143 score: 2.0E-22coord: 77..95 score: 2.0
IPR001153	Barwin domain	PFAM	PF00967	Barwin	coord: 25..144 score: 2.4
IPR001153	Barwin domain	PROFILE	PS51174	BARWIN_3	coord: 23..144 score: 70
IPR009009	RlpA-like protein, double-psi beta-barrel domain	GENE3D	G3DSA:2.40.40.10		coord: 24..144 score: 2.6
IPR009009	RlpA-like protein, double-psi beta-barrel domain	unknown	SSF50685	Barwin-like endoglucanases	coord: 24..144 score: 1.46
IPR018226	Barwin, conserved site	PROSITE	PS00772	BARWIN_2	coord: 137..144 scor
None	No IPR available	PANTHER	PTHR22595	CHITINASE-RELATED	coord: 1..144 score: 2.6
None	No IPR available	PANTHER	PTHR22595:SF62	HEVEIN-LIKE PREPROPROTEIN	coord: 1..144 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G012290	Cucurbita pepo (Zucchini)	cmocpeB714
CmoCh05G012290	Cucurbita pepo (Zucchini)	cmocpeB717
CmoCh05G012290	Cucurbita pepo (Zucchini)	cmocpeB721
CmoCh05G012290	Cucurbita pepo (Zucchini)	cmocpeB742
CmoCh05G012290	Bottle gourd (USVL1VR-Ls)	cmolsiB706
CmoCh05G012290	Cucumber (Gy14) v2	cgybcmoB243
CmoCh05G012290	Melon (DHL92) v3.6.1	cmomedB821
CmoCh05G012290	Silver-seed gourd	carcmoB0974
CmoCh05G012290	Silver-seed gourd	carcmoB1442
CmoCh05G012290	Cucumber (Chinese Long) v3	cmocucB0924
CmoCh05G012290	Cucumber (Chinese Long) v3	cmocucB0950
CmoCh05G012290	Watermelon (97103) v2	cmowmbB785
CmoCh05G012290	Watermelon (97103) v2	cmowmbB805
CmoCh05G012290	Wax gourd	cmowgoB0919
CmoCh05G012290	Cucurbita moschata (Rifu)	cmocmoB148
CmoCh05G012290	Cucurbita moschata (Rifu)	cmocmoB305
CmoCh05G012290	Cucumber (Gy14) v1	cgycmoB0362
CmoCh05G012290	Cucurbita maxima (Rimu)	cmacmoB190
CmoCh05G012290	Cucurbita maxima (Rimu)	cmacmoB787
CmoCh05G012290	Wild cucumber (PI 183967)	cmocpiB787
CmoCh05G012290	Cucumber (Chinese Long) v2	cmocuB783
CmoCh05G012290	Melon (DHL92) v3.5.1	cmomeB724
CmoCh05G012290	Watermelon (Charleston Gray)	cmowcgB700
CmoCh05G012290	Watermelon (97103) v1	cmowmB757