CmoCh05G012260 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G012260
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	AUX/IAA transcription factor
Location	Cmo_Chr05 : 9595289 .. 9597051 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCGTCCTGCAAATAAAATTCTCGATCTCGGCGATTTCATAAGCAAAATCAGACGAATTATCGCAAAATTCCGACGAATTCGAAAGCGAAAAAGAGTAGCAGAGTCATGGAATCGGAGCAGAACGATGAGTACAGAGCGATCTTGATCAATTTCGAGCAGACAGAGCTCCGCCTCGGCTTGCCCGGTGGCGACGGCGGCGACACCAGCGGCGGGAAGAGTAGCTCGGCGGCGAAGAGAGGTTTCATGGAAACTGTGGATTTGAAGCTTAATCTATCGTCGTCAATGGCGCCGGAGAAGGAGGAGGCGACGAATTTGGAAGAGACTAAAAGCTCTTCGCAACGGCCTAACGATTTCGCTAAGCCTCCTTCCAAGTAATTTTCTTTTTCTCTATTTAAAATTAATTAAAATTGAGAATTATACATGAAAAAAATAGGTAATTAATTATAAAATTAAGATTATAATTATATTTTAGTGAAAAAAACCCAATTTTTTATTATTATTTATTACTTTAAGAATGTCTCAATAAATCAAAATTGATTAAATAATTGTAAAAATTTAATTTATAATGAAAATGCTAATAAATTGTTTTATTTATTTTTGGTTGAAATTCAAAAATAAAAAATAAAAAAAACATAATTTTCCCTAATAATTTTTTATGAATTTATTATTAACAGAGCACAAGTAGTCGGTTGGCCGCCGGTTCGATCATCAAGGAAGAATTTGGGGGCGCAGAGGACCGGTGGGGAAGACGGCGGCGGGGGCGGCGGCGCGTTCGTGAAAGTTAGCATGGACGGCGCTCCTTATTTACGGAAGGTGGACTTGAAGCTATATGGTAGCTACAAAGACCTTTCCCACGCGCTTGCCAAAATGTTTAGCTCTTTCACCGTTGGTAATTTTTTTTTTTTACTTTTTTACTGTCGGTAACTTTTTAAGACGTACTATAAGATTAATAGTATATTTTACCCAAATGGTAAAAATAAAATTTCGTTGGAAATTTTTTAGTCGAAAGTTTTAGTCATGTTTGAATGGCAGGAACGTGCGAGTCGGAAGGAATGAAGGATTTCATGAACGAAAGAAAATTAGTAGACCTTTTGAACGGTTCAGAATACGTACCGACTTATGAAGACAAAGATGGAGATTGGATGCTCGTCGGCGATGTACCATGGGAGTAAGCTTTCTTTTTTTCATTTAGCTTATGAAATGCTCGGTTTATGAAAAATCTAACGTCTTAAAGTTTTGGGTCGGGTAGACAAACGAACCCTAACTTAATTACGAGTCAAATACCTTCAACGTCTGCGTAGAAAGACTCGAAATCCCTCTAATTGTACTGTCTTGCTAAACAGGATGTTTGTCGATTCATGCAAACGTTTACGGATCATGAAAGAGTCTGAAGCGATTGGACTCGGTAAGTCACACAAATCTCTCGTGTATAATTTTTTTAATACCTTATAAAAGAGAAAATTTTGATTCTCTTATTAATTTTATTTTTAAAATTTGATTTAATTATGGACAGCACCAAGAACAATGGAGAAAAGCAAGAACAGAAGCTGAGGTGTTTTTATTTACGAAAATTTGTTTGATATTTACCGATTTAAATTTATTTTCTAATTATTATATATTAAGAACAAGAGGGGTTTATGTGCAATTTCTAATTATTATATATTGAGTTTGTAAGGACTTATAAATATAACATTAGCATAGAGGGGTTTATGTGCAATTTCTACTTAAAACTTAATATTTTACATATTATGCTGTATTATTA

mRNA sequence

TTCGTCCTGCAAATAAAATTCTCGATCTCGGCGATTTCATAAGCAAAATCAGACGAATTATCGCAAAATTCCGACGAATTCGAAAGCGAAAAAGAGTAGCAGAGTCATGGAATCGGAGCAGAACGATGAGTACAGAGCGATCTTGATCAATTTCGAGCAGACAGAGCTCCGCCTCGGCTTGCCCGGTGGCGACGGCGGCGACACCAGCGGCGGGAAGAGTAGCTCGGCGGCGAAGAGAGGTTTCATGGAAACTGTGGATTTGAAGCTTAATCTATCGTCGTCAATGGCGCCGGAGAAGGAGGAGGCGACGAATTTGGAAGAGACTAAAAGCTCTTCGCAACGGCCTAACGATTTCGCTAAGCCTCCTTCCAAAGCACAAGTAGTCGGTTGGCCGCCGGTTCGATCATCAAGGAAGAATTTGGGGGCGCAGAGGACCGGTGGGGAAGACGGCGGCGGGGGCGGCGGCGCGTTCGTGAAAGTTAGCATGGACGGCGCTCCTTATTTACGGAAGGTGGACTTGAAGCTATATGGTAGCTACAAAGACCTTTCCCACGCGCTTGCCAAAATGTTTAGCTCTTTCACCGTTGGAACGTGCGAGTCGGAAGGAATGAAGGATTTCATGAACGAAAGAAAATTAGTAGACCTTTTGAACGGTTCAGAATACGTACCGACTTATGAAGACAAAGATGGAGATTGGATGCTCGTCGGCGATGTACCATGGGAGATGTTTGTCGATTCATGCAAACGTTTACGGATCATGAAAGAGTCTGAAGCGATTGGACTCGCACCAAGAACAATGGAGAAAAGCAAGAACAGAAGCTGAGGTGTTTTTATTTACGAAAATTTGTTTGATATTTACCGATTTAAATTTATTTTCTAATTATTATATATTAAGAACAAGAGGGGTTTATGTGCAATTTCTAATTATTATATATTGAGTTTGTAAGGACTTATAAATATAACATTAGCATAGAGGGGTTTATGTGCAATTTCTACTTAAAACTTAATATTTTACATATTATGCTGTATTATTA

Coding sequence (CDS)

ATGGAATCGGAGCAGAACGATGAGTACAGAGCGATCTTGATCAATTTCGAGCAGACAGAGCTCCGCCTCGGCTTGCCCGGTGGCGACGGCGGCGACACCAGCGGCGGGAAGAGTAGCTCGGCGGCGAAGAGAGGTTTCATGGAAACTGTGGATTTGAAGCTTAATCTATCGTCGTCAATGGCGCCGGAGAAGGAGGAGGCGACGAATTTGGAAGAGACTAAAAGCTCTTCGCAACGGCCTAACGATTTCGCTAAGCCTCCTTCCAAAGCACAAGTAGTCGGTTGGCCGCCGGTTCGATCATCAAGGAAGAATTTGGGGGCGCAGAGGACCGGTGGGGAAGACGGCGGCGGGGGCGGCGGCGCGTTCGTGAAAGTTAGCATGGACGGCGCTCCTTATTTACGGAAGGTGGACTTGAAGCTATATGGTAGCTACAAAGACCTTTCCCACGCGCTTGCCAAAATGTTTAGCTCTTTCACCGTTGGAACGTGCGAGTCGGAAGGAATGAAGGATTTCATGAACGAAAGAAAATTAGTAGACCTTTTGAACGGTTCAGAATACGTACCGACTTATGAAGACAAAGATGGAGATTGGATGCTCGTCGGCGATGTACCATGGGAGATGTTTGTCGATTCATGCAAACGTTTACGGATCATGAAAGAGTCTGAAGCGATTGGACTCGCACCAAGAACAATGGAGAAAAGCAAGAACAGAAGCTGA

Homology

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BLAST of CmoCh05G012260 vs. Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.8e-75
Identity = 155/245 (63.27%), Postives = 177/245 (72.24%), Query Frame = 1


Query: 13  LINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSMAPEKEEATNLEE 72
           +INFE TELRLGLPGG+ G    GK++   KRGF ETVDLKLNLSS+ A +     +LE 
Sbjct: 1   MINFEATELRLGLPGGNHGGEMAGKNNG--KRGFSETVDLKLNLSST-AMDSVSKVDLEN 60

Query: 73  TKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNL-------------GAQRTGGEDGGGGG 132
            K          KPP+KAQVVGWPPVRS RKN+             G  +T G  G    
Sbjct: 61  MKEK------VVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSS 120

Query: 133 G------AFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMN 192
                  A+VKVSMDGAPYLRK+DLKLY +Y+DLS+AL+KMFSSFT+G    +GMKDFMN
Sbjct: 121 ASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMN 180

Query: 193 ERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEK 239
           E KL+DLLNGS+YVPTYEDKDGDWMLVGDVPWEMFVDSCKR+RIMK SEAIGLAPR +EK
Sbjct: 181 ESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEK 236

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BLAST of CmoCh05G012260 vs. Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 274.6 bits (701), Expect = 1.0e-72
Identity = 151/230 (65.65%), Postives = 173/230 (75.22%), Query Frame = 1


Query: 14  INFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSMAPEKEEATNLEET 73
           +N ++TEL LGLPGG     S  KS    KRGF ETVDLKLNL S+     +  TN    
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPK 60

Query: 74  KSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLGAQRTGGE-----DGGGGGGAFVKVSMD 133
           + +  +  D +KPP+KAQVVGWPPVR+ RKN+ A +  GE       GGG  AFVKVSMD
Sbjct: 61  EKTFLK--DPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMD 120

Query: 134 GAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMNERKLVDLLNGSEYVP 193
           GAPYLRKVDLK+Y SYKDLS ALAKMFSSFT+G+  ++GM DFMNE K++DLLN SEYVP
Sbjct: 121 GAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVP 180

Query: 194 TYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEKSKNRS 239
           +YEDKDGDWMLVGDVPW MFV+SCKRLRIMK SEAIGLAPR MEK KNRS
Sbjct: 181 SYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228

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BLAST of CmoCh05G012260 vs. Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.8e-69
Identity = 147/243 (60.49%), Postives = 174/243 (71.60%), Query Frame = 1


Query: 13  LINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSMAPEKEEATNLEE 72
           L+N + TEL LGLPGG     S  KS+  +KRGF ETVDL LNL S+    KE + +L+ 
Sbjct: 5   LMNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSN----KEGSVDLKN 64

Query: 73  TKSSSQRPN---DFAKPPSKAQVVGWPPVRSSRKNL-------------GAQRTGGEDGG 132
             +  +      D +KPP+KAQVVGWPPVR+ RKN+              +++ G   GG
Sbjct: 65  VSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGG 124

Query: 133 GGGGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMNERK 192
             G   VKVSMDGAPYLRKVDLK+Y SY+DLS ALAKMFSSFT+G   ++GM DFMNE K
Sbjct: 125 AAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESK 184

Query: 193 LVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEK-SK 239
           L++LLN SEYVP+YEDKDGDWMLVGDVPWEMFV+SCKRLRIMK SEA+GLAPR MEK  K
Sbjct: 185 LMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCK 243

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BLAST of CmoCh05G012260 vs. Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.6e-67
Identity = 157/272 (57.72%), Postives = 172/272 (63.24%), Query Frame = 1


Query: 16  FEQTELRLGLPGG--DGGDTSGGKSSSAAKRGFMETVDLKLNLSSSMA-----PEKEEAT 75
           FE TELRLGLPGG  DG   +    SS+ KRGF ET+DLKL L  + A      +KEEA 
Sbjct: 7   FEATELRLGLPGGGGDGDAAAAAARSSSGKRGFAETIDLKLKLEPAAAAVDDDDDKEEAA 66

Query: 76  --NLEETKSSSQRPNDFAKPPS-----------------------------KAQVVGWPP 135
             + E+        ND A PP+                             KAQVVGWPP
Sbjct: 67  ADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKAQVVGWPP 126

Query: 136 VRSSRKN-LGAQRTGGEDGGGGGG----------AFVKVSMDGAPYLRKVDLKLYGSYKD 195
           VRS RKN L  Q   G+D   GGG          AFVKVSMDGAPYLRKVDLK+Y SY +
Sbjct: 127 VRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLE 186

Query: 196 LSHALAKMFSSFTVGTCESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWE 239
           LS AL KMFSSFT+G C S G+   MNE K+ DLLNGSEYVPTYEDKDGDWMLVGDVPWE
Sbjct: 187 LSKALEKMFSSFTIGNCGSHGVNG-MNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWE 246

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BLAST of CmoCh05G012260 vs. Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.2e-67
Identity = 152/248 (61.29%), Postives = 170/248 (68.55%), Query Frame = 1


Query: 14  INFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMET-----------VDLKLNLSSSMAP 73
           + FE+TELRLGLPG  G +          KRGF ET           VDL LNLSS  A 
Sbjct: 1   MGFEETELRLGLPGNGGTE-----EVLIRKRGFSETETGHEDESATTVDLMLNLSSKEAA 60

Query: 74  EKEEA----TNLEET--KSSSQRPNDFAKPPSKAQVVGWPPVRSSRKN-LGAQRTGGEDG 133
               A    T+  +T  K  +  P D AKPP+K QVVGWPPVRS RKN L  Q++ GE+ 
Sbjct: 61  TTAAAAADPTDKHKTLPKEKTLLPADPAKPPAKTQVVGWPPVRSFRKNMLAVQKSVGEES 120

Query: 134 ---GGGGGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFM 193
                   +FVKVSMDGAPYLRKVDLK+Y SY++LS +L KMFSSFT G CES+GMKDFM
Sbjct: 121 EKNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGMKDFM 180

Query: 194 NERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAI--GLAPRT 239
           NE KL DLLN S+YVPTYEDKDGDWMLVGDVPWEMFV+SCKRLRIMK  EAI  GLAPR 
Sbjct: 181 NESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRA 240

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BLAST of CmoCh05G012260 vs. TrEMBL
Match: A0A0A0LG78_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_2G010920 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 4.6e-109
Identity = 207/238 (86.97%), Postives = 219/238 (92.02%), Query Frame = 1


Query: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSM 60
           MES QNDEYRAILINFEQTELRLGLPGGDGG   GGKSSSA KRGFMETVDLKLNL+SSM
Sbjct: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGG---GGKSSSAGKRGFMETVDLKLNLASSM 60

Query: 61  APEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLG--AQRTGGEDGGGG 120
           A  KEEATNLEE K+SSQ+PNDFAKPPSKAQVVGWPPVRSSRKNLG  + R GG++GG G
Sbjct: 61  ASTKEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAG 120

Query: 121 GGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMNERKLV 180
           G +FVKVSMDGAPYLRKVDLKLY SYK+LSHALA+MFSSFT+G CESEGMKDFMNE K V
Sbjct: 121 G-SFVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSV 180

Query: 181 DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEKSKN 237
           DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKES+AIGLAPR+MEK KN
Sbjct: 181 DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGLAPRSMEKQKN 234

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BLAST of CmoCh05G012260 vs. TrEMBL
Match: A0A061F988_THECC (Auxin-responsive protein OS=Theobroma cacao GN=TCM_026343 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.4e-78
Identity = 160/238 (67.23%), Postives = 182/238 (76.47%), Query Frame = 1


Query: 13  LINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSMAPEKEEATNLEE 72
           +INFE+TELRLGLPGG+G D  G  + +  KRGF ETVDLKLNLS++     +EA  +++
Sbjct: 14  MINFEETELRLGLPGGNGND--GEMTKNNGKRGFSETVDLKLNLSTAKEAVADEAEKVKK 73

Query: 73  TKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLGAQRTGGEDGGGG------------GG 132
             + + R  D AKPP+KAQVVGWPPVRS RKN+ A +    D  G               
Sbjct: 74  KSTVAPRSADPAKPPAKAQVVGWPPVRSFRKNIMAVQKNSSDVEGEKAGSSNTTTATVAA 133

Query: 133 AFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMNERKLVDL 192
           AFVKVSMDGAPYLRKVDLKLY SY++LS AL KMFSSFT+G C S+GMKDFMNE KL+DL
Sbjct: 134 AFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDL 193

Query: 193 LNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEKSKNRS 239
           LNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK SEAIGLAPR +EK KNRS
Sbjct: 194 LNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 249

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BLAST of CmoCh05G012260 vs. TrEMBL
Match: W9RTC2_9ROSA (Auxin-responsive protein OS=Morus notabilis GN=L484_024574 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.9e-78
Identity = 165/252 (65.48%), Postives = 183/252 (72.62%), Query Frame = 1


Query: 13  LINFEQTELRLGLPGGDGGDTSGGKSSSAA---------------KRGFMETVDLKLNLS 72
           LINFE+TELRLGLPGG GG  S   +++                 KRGF ETVDLKLNLS
Sbjct: 6   LINFEETELRLGLPGGKGGGNSSTSTTTTTAAATEGGIEATKNNGKRGFPETVDLKLNLS 65

Query: 73  SSMAPEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNL-GAQRTGGED-- 132
           S  +   ++    E   S      D  KPP+KAQVVGWPPVRS RKN+  AQ+  G+   
Sbjct: 66  SKDSGSLDQVDKKEIKTSPVSPSTDSVKPPAKAQVVGWPPVRSFRKNIVSAQKNSGDHEA 125

Query: 133 ---GGGGGG-----AFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESE 192
              GGGGGG     AFVKVSMDGAPYLRKVDLKLY SY++LS AL KMFSSFT+G C S+
Sbjct: 126 VKAGGGGGGSSSSAAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQ 185

Query: 193 GMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGL 239
           GMKDFMNE KL+DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK SEAIGL
Sbjct: 186 GMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 245

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BLAST of CmoCh05G012260 vs. TrEMBL
Match: A0A067JIG3_JATCU (Auxin-responsive protein OS=Jatropha curcas GN=JCGZ_23500 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.2e-78
Identity = 163/255 (63.92%), Postives = 190/255 (74.51%), Query Frame = 1


Query: 3   SEQNDEYRAILINFEQTELRLGLPGGDGGDTSGGKSSSAA---------KRGFMETVDLK 62
           S + D+Y  + INFE+TELRLGLPGG GG   GG +++           KRGF ETVDLK
Sbjct: 2   SAEADKY--VTINFEETELRLGLPGGGGG--GGGNTTNEGDQIAKINNGKRGFSETVDLK 61

Query: 63  LNLSSSMAPEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKN-LGAQRTGG 122
           LNLS+  + ++E+     +  SS    ND AKPP+KAQVVGWPP+RS RKN +  Q++ G
Sbjct: 62  LNLSTKESGKEEKMKEKTDVPSS----NDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNG 121

Query: 123 EDG---------GGGGGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTC 182
           ++          G    AFVKVSMDGAPYLRKVDLKLY SY++LS AL KMFSSFT+G C
Sbjct: 122 DEAEKAATATAAGSSSAAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNC 181

Query: 183 ESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEA 239
            S+GMKDFMNE KL+DLLNGSEYVPTYEDKDGDWMLVGDVPWEMF+DSCKRLRIMK SEA
Sbjct: 182 GSQGMKDFMNESKLIDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGSEA 241

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BLAST of CmoCh05G012260 vs. TrEMBL
Match: B9I5F9_POPTR (Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0013s03870g PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 7.2e-78
Identity = 158/232 (68.10%), Postives = 179/232 (77.16%), Query Frame = 1


Query: 13  LINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSMAPEK-EEATNLE 72
           +INFE+TELRLGLPGG G    G  + S  KRGF ETVDLKLNLS+  + +  +E   ++
Sbjct: 14  MINFEETELRLGLPGGIGNGNDGEVAKSNGKRGFSETVDLKLNLSTKESGKGGDEEKVMK 73

Query: 73  ETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLGAQRTGGEDGG------GGGGAFVKV 132
           E   +     D AKPP+KAQVVGWPP+RS RKN+ A +    D G      G G AFVKV
Sbjct: 74  EKTVAPPASTDPAKPPAKAQVVGWPPIRSFRKNVMAVQKNSNDNGEKSGSSGTGVAFVKV 133

Query: 133 SMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMNERKLVDLLNGSE 192
           SMDGAPYLRKVDLKLY SY++LS AL KMFSSFT+G C S+GMKDFMNE KL+DLLNGS+
Sbjct: 134 SMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSD 193

Query: 193 YVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEKSKNR 238
           YVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK SEAIGLAPR +EK KNR
Sbjct: 194 YVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNR 245

[Close]

BLAST of CmoCh05G012260 vs. TAIR10
Match: AT3G04730.1 (AT3G04730.1 indoleacetic acid-induced protein 16)

HSP 1 Score: 282.3 bits (721), Expect = 2.7e-76
Identity = 155/245 (63.27%), Postives = 177/245 (72.24%), Query Frame = 1


Query: 13  LINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSMAPEKEEATNLEE 72
           +INFE TELRLGLPGG+ G    GK++   KRGF ETVDLKLNLSS+ A +     +LE 
Sbjct: 1   MINFEATELRLGLPGGNHGGEMAGKNNG--KRGFSETVDLKLNLSST-AMDSVSKVDLEN 60

Query: 73  TKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNL-------------GAQRTGGEDGGGGG 132
            K          KPP+KAQVVGWPPVRS RKN+             G  +T G  G    
Sbjct: 61  MKEK------VVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSS 120

Query: 133 G------AFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMN 192
                  A+VKVSMDGAPYLRK+DLKLY +Y+DLS+AL+KMFSSFT+G    +GMKDFMN
Sbjct: 121 ASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMN 180

Query: 193 ERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEK 239
           E KL+DLLNGS+YVPTYEDKDGDWMLVGDVPWEMFVDSCKR+RIMK SEAIGLAPR +EK
Sbjct: 181 ESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEK 236

[Close]

BLAST of CmoCh05G012260 vs. TAIR10
Match: AT4G14550.1 (AT4G14550.1 indole-3-acetic acid inducible 14)

HSP 1 Score: 274.6 bits (701), Expect = 5.6e-74
Identity = 151/230 (65.65%), Postives = 173/230 (75.22%), Query Frame = 1


Query: 14  INFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSMAPEKEEATNLEET 73
           +N ++TEL LGLPGG     S  KS    KRGF ETVDLKLNL S+     +  TN    
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPK 60

Query: 74  KSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLGAQRTGGE-----DGGGGGGAFVKVSMD 133
           + +  +  D +KPP+KAQVVGWPPVR+ RKN+ A +  GE       GGG  AFVKVSMD
Sbjct: 61  EKTFLK--DPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMD 120

Query: 134 GAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMNERKLVDLLNGSEYVP 193
           GAPYLRKVDLK+Y SYKDLS ALAKMFSSFT+G+  ++GM DFMNE K++DLLN SEYVP
Sbjct: 121 GAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVP 180

Query: 194 TYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEKSKNRS 239
           +YEDKDGDWMLVGDVPW MFV+SCKRLRIMK SEAIGLAPR MEK KNRS
Sbjct: 181 SYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228

[Close]

BLAST of CmoCh05G012260 vs. TAIR10
Match: AT3G23050.1 (AT3G23050.1 indole-3-acetic acid 7)

HSP 1 Score: 263.8 bits (673), Expect = 9.9e-71
Identity = 147/243 (60.49%), Postives = 174/243 (71.60%), Query Frame = 1


Query: 13  LINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSMAPEKEEATNLEE 72
           L+N + TEL LGLPGG     S  KS+  +KRGF ETVDL LNL S+    KE + +L+ 
Sbjct: 5   LMNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSN----KEGSVDLKN 64

Query: 73  TKSSSQRPN---DFAKPPSKAQVVGWPPVRSSRKNL-------------GAQRTGGEDGG 132
             +  +      D +KPP+KAQVVGWPPVR+ RKN+              +++ G   GG
Sbjct: 65  VSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGG 124

Query: 133 GGGGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMNERK 192
             G   VKVSMDGAPYLRKVDLK+Y SY+DLS ALAKMFSSFT+G   ++GM DFMNE K
Sbjct: 125 AAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESK 184

Query: 193 LVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEK-SK 239
           L++LLN SEYVP+YEDKDGDWMLVGDVPWEMFV+SCKRLRIMK SEA+GLAPR MEK  K
Sbjct: 185 LMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCK 243

[Close]

BLAST of CmoCh05G012260 vs. TAIR10
Match: AT1G04250.1 (AT1G04250.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 254.6 bits (649), Expect = 6.0e-68
Identity = 141/234 (60.26%), Postives = 172/234 (73.50%), Query Frame = 1


Query: 11  AILINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSMAPEKEEATN- 70
           ++ +N  +TEL LGLPGGD      G      KRGF ETVDLKLNL++  A ++   T+ 
Sbjct: 4   SVELNLRETELCLGLPGGDTVAPVTGN-----KRGFSETVDLKLNLNNEPANKEGSTTHD 63

Query: 71  --LEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKN--LGAQRTGGEDGGGGGGAFVKV 130
               ++K  S  P D AKPP+KAQVVGWPPVRS RKN  +  Q++    GG    AFVKV
Sbjct: 64  VVTFDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKS---SGGPEAAAFVKV 123

Query: 131 SMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGT-CESEGMKDFMNERKLVDLLNGS 190
           SMDGAPYLRK+DL++Y SY +LS+AL+ MFSSFT+G     EGM DFMNERKL+DL+N  
Sbjct: 124 SMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSW 183

Query: 191 EYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEKSKNRS 239
           +YVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MK S+AIGLAPR MEK K+R+
Sbjct: 184 DYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSRA 229

[Close]

BLAST of CmoCh05G012260 vs. TAIR10
Match: AT5G65670.1 (AT5G65670.1 indole-3-acetic acid inducible 9)

HSP 1 Score: 203.4 bits (516), Expect = 1.6e-52
Identity = 133/278 (47.84%), Postives = 160/278 (57.55%), Query Frame = 1


Query: 14  INFEQTELRLGLPGGDGG------------------------------DTSGGKSSSAAK 73
           I+ + TEL LGLPG                                   +S   ++S  K
Sbjct: 61  ISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDEICSSSQKNNASGNK 120

Query: 74  RGFMETVDLKLNLSSSMAPEK-----EEATNLEETKS----------SSQRPNDFAKPPS 133
           RGF +T+D      SS+  EK     E A     TK           SS   N  + P +
Sbjct: 121 RGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNSSSPPAA 180

Query: 134 KAQVVGWPPVRSSRKNLGA---QRTGGEDGGGGGGA-FVKVSMDGAPYLRKVDLKLYGSY 193
           KAQ+VGWPPVRS RKN  A   + +   DG  G GA FVKVSMDGAPYLRKVDL+ Y +Y
Sbjct: 181 KAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNY 240

Query: 194 KDLSHALAKMFSSFTVGTCESEGM--KDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGD 239
            +LS AL KMF++FT+G C S G   KD ++E KL DLLNG +YV TYEDKDGDWMLVGD
Sbjct: 241 GELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGD 300

[Close]

BLAST of CmoCh05G012260 vs. NCBI nr
Match: gi|778666511|ref|XP_011648754.1| (PREDICTED: auxin-responsive protein IAA16 isoform X1 [Cucumis sativus])

HSP 1 Score: 402.1 bits (1032), Expect = 6.6e-109
Identity = 207/238 (86.97%), Postives = 219/238 (92.02%), Query Frame = 1


Query: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSM 60
           MES QNDEYRAILINFEQTELRLGLPGGDGG   GGKSSSA KRGFMETVDLKLNL+SSM
Sbjct: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGG---GGKSSSAGKRGFMETVDLKLNLASSM 60

Query: 61  APEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLG--AQRTGGEDGGGG 120
           A  KEEATNLEE K+SSQ+PNDFAKPPSKAQVVGWPPVRSSRKNLG  + R GG++GG G
Sbjct: 61  ASTKEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAG 120

Query: 121 GGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMNERKLV 180
           G +FVKVSMDGAPYLRKVDLKLY SYK+LSHALA+MFSSFT+G CESEGMKDFMNE K V
Sbjct: 121 G-SFVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSV 180

Query: 181 DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEKSKN 237
           DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKES+AIGLAPR+MEK KN
Sbjct: 181 DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGLAPRSMEKQKN 234

[Close]

BLAST of CmoCh05G012260 vs. NCBI nr
Match: gi|659070641|ref|XP_008455985.1| (PREDICTED: auxin-responsive protein IAA16 isoform X1 [Cucumis melo])

HSP 1 Score: 397.9 bits (1021), Expect = 1.2e-107
Identity = 205/238 (86.13%), Postives = 215/238 (90.34%), Query Frame = 1


Query: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSM 60
           MES +NDEY AILINFEQTELRLGLPGGDGG   GGKSSSA KRGFMETVDLKLNL+SSM
Sbjct: 1   MESGKNDEYSAILINFEQTELRLGLPGGDGG--GGGKSSSAGKRGFMETVDLKLNLASSM 60

Query: 61  APEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLG--AQRTGGEDGGGG 120
           A  KEE TNLEE KS SQ+PNDFAKPPSK QVVGWPPVRSSRKNLG  + R GG++GGG 
Sbjct: 61  ASAKEEGTNLEEIKSCSQQPNDFAKPPSKTQVVGWPPVRSSRKNLGVSSSRKGGDEGGG- 120

Query: 121 GGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMNERKLV 180
             +FVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFT+G CESEGMKDFMNE K V
Sbjct: 121 --SFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTIGKCESEGMKDFMNESKSV 180

Query: 181 DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEKSKN 237
           DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKES+AIGLAPR+MEK KN
Sbjct: 181 DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGLAPRSMEKQKN 233

[Close]

BLAST of CmoCh05G012260 vs. NCBI nr
Match: gi|778666514|ref|XP_011648755.1| (PREDICTED: auxin-responsive protein IAA16 isoform X2 [Cucumis sativus])

HSP 1 Score: 386.3 bits (991), Expect = 3.8e-104
Identity = 199/228 (87.28%), Postives = 210/228 (92.11%), Query Frame = 1


Query: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSM 60
           MES QNDEYRAILINFEQTELRLGLPGGDGG   GGKSSSA KRGFMETVDLKLNL+SSM
Sbjct: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGG---GGKSSSAGKRGFMETVDLKLNLASSM 60

Query: 61  APEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLG--AQRTGGEDGGGG 120
           A  KEEATNLEE K+SSQ+PNDFAKPPSKAQVVGWPPVRSSRKNLG  + R GG++GG G
Sbjct: 61  ASTKEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAG 120

Query: 121 GGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMNERKLV 180
           G +FVKVSMDGAPYLRKVDLKLY SYK+LSHALA+MFSSFT+G CESEGMKDFMNE K V
Sbjct: 121 G-SFVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSV 180

Query: 181 DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGL 227
           DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKES+AIGL
Sbjct: 181 DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 224

[Close]

BLAST of CmoCh05G012260 vs. NCBI nr
Match: gi|659070643|ref|XP_008455992.1| (PREDICTED: auxin-responsive protein IAA16 isoform X2 [Cucumis melo])

HSP 1 Score: 382.5 bits (981), Expect = 5.4e-103
Identity = 197/228 (86.40%), Postives = 206/228 (90.35%), Query Frame = 1


Query: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSM 60
           MES +NDEY AILINFEQTELRLGLPGGDGG   GGKSSSA KRGFMETVDLKLNL+SSM
Sbjct: 1   MESGKNDEYSAILINFEQTELRLGLPGGDGG--GGGKSSSAGKRGFMETVDLKLNLASSM 60

Query: 61  APEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLG--AQRTGGEDGGGG 120
           A  KEE TNLEE KS SQ+PNDFAKPPSK QVVGWPPVRSSRKNLG  + R GG++GGG 
Sbjct: 61  ASAKEEGTNLEEIKSCSQQPNDFAKPPSKTQVVGWPPVRSSRKNLGVSSSRKGGDEGGG- 120

Query: 121 GGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMNERKLV 180
             +FVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFT+G CESEGMKDFMNE K V
Sbjct: 121 --SFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTIGKCESEGMKDFMNESKSV 180

Query: 181 DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGL 227
           DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKES+AIGL
Sbjct: 181 DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 223

[Close]

BLAST of CmoCh05G012260 vs. NCBI nr
Match: gi|590642617|ref|XP_007030567.1| (Indoleacetic acid-induced protein 16 [Theobroma cacao])

HSP 1 Score: 300.8 bits (769), Expect = 2.1e-78
Identity = 160/238 (67.23%), Postives = 182/238 (76.47%), Query Frame = 1


Query: 13  LINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSMAPEKEEATNLEE 72
           +INFE+TELRLGLPGG+G D  G  + +  KRGF ETVDLKLNLS++     +EA  +++
Sbjct: 14  MINFEETELRLGLPGGNGND--GEMTKNNGKRGFSETVDLKLNLSTAKEAVADEAEKVKK 73

Query: 73  TKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLGAQRTGGEDGGGG------------GG 132
             + + R  D AKPP+KAQVVGWPPVRS RKN+ A +    D  G               
Sbjct: 74  KSTVAPRSADPAKPPAKAQVVGWPPVRSFRKNIMAVQKNSSDVEGEKAGSSNTTTATVAA 133

Query: 133 AFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMNERKLVDL 192
           AFVKVSMDGAPYLRKVDLKLY SY++LS AL KMFSSFT+G C S+GMKDFMNE KL+DL
Sbjct: 134 AFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDL 193

Query: 193 LNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRTMEKSKNRS 239
           LNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK SEAIGLAPR +EK KNRS
Sbjct: 194 LNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAVEKCKNRS 249

The following BLAST results are available for this feature:

BLAST of CmoCh05G012260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IAA16_ARATH	4.8e-75	63.27	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1	[more]
IAA14_ARATH	1.0e-72	65.65	Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2	[more]
IAA7_ARATH	1.8e-69	60.49	Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1	[more]
IAA30_ORYSJ	1.6e-67	57.72	Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=...	[more]
AUX28_SOYBN	2.2e-67	61.29	Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1	[more]

BLAST of CmoCh05G012260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG78_CUCSA	4.6e-109	86.97	Auxin-responsive protein OS=Cucumis sativus GN=Csa_2G010920 PE=3 SV=1	[more]
A0A061F988_THECC	1.4e-78	67.23	Auxin-responsive protein OS=Theobroma cacao GN=TCM_026343 PE=3 SV=1	[more]
W9RTC2_9ROSA	1.9e-78	65.48	Auxin-responsive protein OS=Morus notabilis GN=L484_024574 PE=3 SV=1	[more]
A0A067JIG3_JATCU	4.2e-78	63.92	Auxin-responsive protein OS=Jatropha curcas GN=JCGZ_23500 PE=3 SV=1	[more]
B9I5F9_POPTR	7.2e-78	68.10	Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0013s03870g PE=3 SV=1	[more]

BLAST of CmoCh05G012260 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04730.1	2.7e-76	63.27	indoleacetic acid-induced protein 16	[more]
AT4G14550.1	5.6e-74	65.65	indole-3-acetic acid inducible 14	[more]
AT3G23050.1	9.9e-71	60.49	indole-3-acetic acid 7	[more]
AT1G04250.1	6.0e-68	60.26	AUX/IAA transcriptional regulator family protein	[more]
AT5G65670.1	1.6e-52	47.84	indole-3-acetic acid inducible 9	[more]

BLAST of CmoCh05G012260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778666511\|ref\|XP_011648754.1\|	6.6e-109	86.97	PREDICTED: auxin-responsive protein IAA16 isoform X1 [Cucumis sativus]	[more]
gi\|659070641\|ref\|XP_008455985.1\|	1.2e-107	86.13	PREDICTED: auxin-responsive protein IAA16 isoform X1 [Cucumis melo]	[more]
gi\|778666514\|ref\|XP_011648755.1\|	3.8e-104	87.28	PREDICTED: auxin-responsive protein IAA16 isoform X2 [Cucumis sativus]	[more]
gi\|659070643\|ref\|XP_008455992.1\|	5.4e-103	86.40	PREDICTED: auxin-responsive protein IAA16 isoform X2 [Cucumis melo]	[more]
gi\|590642617\|ref\|XP_007030567.1\|	2.1e-78	67.23	Indoleacetic acid-induced protein 16 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000270	PB1_dom
IPR003311	AUX_IAA

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G012260.1	CmoCh05G012260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000270	PB1 domain	PROFILE	PS51745	PB1	coord: 120..220 score: 25
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	FAMILY NOT NAMED	coord: 1..234 score: 2.5E
None	No IPR available	PANTHER	PTHR31734:SF28	AUXIN-RESPONSIVE PROTEIN IAA16	coord: 1..234 score: 2.5E
None	No IPR available	unknown	SSF54277	CAD & PB1 domains	coord: 118..219 score: 1.37

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G012260	Cucsa.133250	Cucumber (Gy14) v1	cgycmoB0362
CmoCh05G012260	CmaCh05G012030	Cucurbita maxima (Rimu)	cmacmoB787
CmoCh05G012260	Cla019805	Watermelon (97103) v1	cmowmB757
CmoCh05G012260	Csa2G010920	Cucumber (Chinese Long) v2	cmocuB783
CmoCh05G012260	MELO3C004382	Melon (DHL92) v3.5.1	cmomeB724
CmoCh05G012260	ClCG02G016650	Watermelon (Charleston Gray)	cmowcgB700
CmoCh05G012260	CSPI02G02980	Wild cucumber (PI 183967)	cmocpiB787
CmoCh05G012260	Lsi11G004450	Bottle gourd (USVL1VR-Ls)	cmolsiB706
CmoCh05G012260	MELO3C004382.2	Melon (DHL92) v3.6.1	cmomedB821
CmoCh05G012260	CsaV3_2G004120	Cucumber (Chinese Long) v3	cmocucB0924
CmoCh05G012260	CsaV3_7G027600	Cucumber (Chinese Long) v3	cmocucB0950
CmoCh05G012260	Cla97C02G042430	Watermelon (97103) v2	cmowmbB785
CmoCh05G012260	Cla97C09G170160	Watermelon (97103) v2	cmowmbB805
CmoCh05G012260	Bhi06G001522	Wax gourd	cmowgoB0919
CmoCh05G012260	CsGy2G003090	Cucumber (Gy14) v2	cgybcmoB243
CmoCh05G012260	Carg22985	Silver-seed gourd	carcmoB1442

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh05G012260	CmoCh17G011940	Cucurbita moschata (Rifu)	cmocmoB305

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G012260	Cucurbita moschata (Rifu)	cmocmoB148
CmoCh05G012260	Cucurbita maxima (Rimu)	cmacmoB190
CmoCh05G012260	Cucurbita pepo (Zucchini)	cmocpeB714
CmoCh05G012260	Cucurbita pepo (Zucchini)	cmocpeB717
CmoCh05G012260	Cucurbita pepo (Zucchini)	cmocpeB721
CmoCh05G012260	Cucurbita pepo (Zucchini)	cmocpeB742
CmoCh05G012260	Silver-seed gourd	carcmoB0974