CmoCh05G011930 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G011930
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description, putative, unclassified, expressed
LocationCmo_Chr05 : 9360602 .. 9361234 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGTGTAAAGGCCCCCACAAGGTATCCTACTGTCCTCATCGGGCCTCTCTCACTGCACTTCAAGTATCCATTCAAGAGAGCAATGAAGCAAGGGTCGAAACTTTGCTAGACAAGAAGGAAGATCACGACAACCCCCGAATGGGCGCACTCAAATTCTTGTCAGCCCTCCAACGGAAAGTCGAACCGAAGGAGGTAATAGAGAAAGGGCTCATGTTCGTAGATGCCACAATAAACTCTCAACCGAGCAAGAGCACTCTGATAGACTCTGGAGCAACCCACAACTTCATTGCCGATCAAGAAGCCAGAAGATTGAGACTCACCATAGGAAAAGACCCGAGGAAAATGAAAGCTGTCAACTCCGAGGCCTTGCCTATTGTGGGAGTTTCCAAGAGAGTCCCCTTCAAAATAGGGGTTTGGACTGGGGAGCTAGATCTTGTTGTGGTTCGCATGGACGACTTCGACGTGGTACTTGGGATGGAGTTCCTCCTAGAGCACAAGGTCATCCCAATGCCATTGGCAAAATGCTTGGTGATCACCGACCGTAACCCCACAGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATCTCGGCCATACAACTGAAAAGGGGACTTGCATGA

mRNA sequence

ATGCTGTGTAAAGGCCCCCACAAGGTATCCTACTGTCCTCATCGGGCCTCTCTCACTGCACTTCAAGTATCCATTCAAGAGAGCAATGAAGCAAGGGTCGAAACTTTGCTAGACAAGAAGGAAGATCACGACAACCCCCGAATGGGCGCACTCAAATTCTTGTCAGCCCTCCAACGGAAAGTCGAACCGAAGGAGGTAATAGAGAAAGGGCTCATGTTCGTAGATGCCACAATAAACTCTCAACCGAGCAAGAGCACTCTGATAGACTCTGGAGCAACCCACAACTTCATTGCCGATCAAGAAGCCAGAAGATTGAGACTCACCATAGGAAAAGACCCGAGGAAAATGAAAGCTGTCAACTCCGAGGCCTTGCCTATTGTGGGAGTTTCCAAGAGAGTCCCCTTCAAAATAGGGGTTTGGACTGGGGAGCTAGATCTTGTTGTGGTTCGCATGGACGACTTCGACGTGGTACTTGGGATGGAGTTCCTCCTAGAGCACAAGGTCATCCCAATGCCATTGGCAAAATGCTTGGTGATCACCGACCGTAACCCCACAGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATCTCGGCCATACAACTGAAAAGGGGACTTGCATGA

Coding sequence (CDS)

ATGCTGTGTAAAGGCCCCCACAAGGTATCCTACTGTCCTCATCGGGCCTCTCTCACTGCACTTCAAGTATCCATTCAAGAGAGCAATGAAGCAAGGGTCGAAACTTTGCTAGACAAGAAGGAAGATCACGACAACCCCCGAATGGGCGCACTCAAATTCTTGTCAGCCCTCCAACGGAAAGTCGAACCGAAGGAGGTAATAGAGAAAGGGCTCATGTTCGTAGATGCCACAATAAACTCTCAACCGAGCAAGAGCACTCTGATAGACTCTGGAGCAACCCACAACTTCATTGCCGATCAAGAAGCCAGAAGATTGAGACTCACCATAGGAAAAGACCCGAGGAAAATGAAAGCTGTCAACTCCGAGGCCTTGCCTATTGTGGGAGTTTCCAAGAGAGTCCCCTTCAAAATAGGGGTTTGGACTGGGGAGCTAGATCTTGTTGTGGTTCGCATGGACGACTTCGACGTGGTACTTGGGATGGAGTTCCTCCTAGAGCACAAGGTCATCCCAATGCCATTGGCAAAATGCTTGGTGATCACCGACCGTAACCCCACAGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATCTCGGCCATACAACTGAAAAGGGGACTTGCATGA
Homology
[Close]
BLAST of CmoCh05G011930 vs. TrEMBL
Match: A5B4X8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020318 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.6e-33
Identity = 81/209 (38.76%), Postives = 124/209 (59.33%), Query Frame = 1 

Query: 2   LCKGPHKVSYCPHRASLTALQVSIQESNEARVETLLDKKEDHDNPRMGALKFLSALQRKV 61
           LC GPH    CP R +L A+               +++KE   + +MG+L+ L+AL+ K 
Sbjct: 297 LCDGPHWARDCPKRKALNAM---------------IEEKEQEGDAKMGSLQLLNALKAKP 356

Query: 62  EPKEVIEKGLMFVDATINSQPSKSTLIDSGATHNFIADQEARRLRLTIGKDPRKMKAVNS 121
            PK    KGLM+V+A +N + +K+ L+D+GATHNF++  EARRL L   K+   +KAVNS
Sbjct: 357 MPKMPQSKGLMYVEALVNGKATKA-LVDTGATHNFVSKDEARRLELQASKEGGWLKAVNS 416

Query: 122 EALPIVGVSKRVPFKIGVWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCL-VIT 181
            A P  GV++ V   IG W G +D  V  MDDF +VLGM+FL +   +P+P  + + ++ 
Sbjct: 417 AAKPSHGVAREVTMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVXAVPLPFLRSMAILE 476

Query: 182 DRNPTVIPASIKQPGNLRMISAIQLKRGL 210
           +  P ++P   +      M+SA+Q+K+GL
Sbjct: 477 EEKPCMVPTVTEGTPKTPMLSAMQVKKGL 489

[Close]
BLAST of CmoCh05G011930 vs. TrEMBL
Match: A5AQF1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014071 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.8e-32
Identity = 84/213 (39.44%), Postives = 125/213 (58.69%), Query Frame = 1 

Query: 2   LCKGPHKVSYCPHRASLTALQVSIQESNEARVETLLDKKEDHDNPRMGALKFLSALQRKV 61
           LC GPH    CP R +L A+               + +KE+  + ++G+L+ L+AL+ K 
Sbjct: 80  LCDGPHWARDCPKRKALNAM---------------IKEKENEGDAQVGSLQLLNALKAKP 139

Query: 62  EPKEVIEKGLMFVDATINSQPSKSTLIDSGATHNFIADQEARRLRLTIGKDPRKMKAVNS 121
            PK    KGLM+V+A +N + +K+ L+D+GATHNF+++ EARRL L   K+   +KAVNS
Sbjct: 140 IPKTPQSKGLMYVEAIVNGKATKA-LVDTGATHNFVSEDEARRLELQASKEGGWLKAVNS 199

Query: 122 EALPIVGVSKRVPFKIGVWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVITD 181
            A P  GV++ V   IG W G +D  V  MDDF +VLGM+FL + K +P+P  + +   +
Sbjct: 200 TAKPSHGVARGVTMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVKAVPLPFLRSMAFLE 259

Query: 182 RN-----PTVIPASIKQPGNLRMISAIQLKRGL 210
                  PTV   ++K P    M+SA+Q+K GL
Sbjct: 260 EEKSCMVPTVTEGTLKTP----MLSAMQVKNGL 272

[Close]
BLAST of CmoCh05G011930 vs. TrEMBL
Match: A5BX03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032357 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.4e-32
Identity = 79/209 (37.80%), Postives = 122/209 (58.37%), Query Frame = 1 

Query: 2   LCKGPHKVSYCPHRASLTALQVSIQESNEARVETLLDKKEDHDNPRMGALKFLSALQRKV 61
           LC GPH    CP R +L A+               +++K    + +MG+L  L AL+ K 
Sbjct: 376 LCDGPHXARDCPKRKALNAM---------------IEEKXQEGDAKMGSLXLLXALKAKX 435

Query: 62  EPKEVIEKGLMFVDATINSQPSKSTLIDSGATHNFIADQEARRLRLTIGKDPRKMKAVNS 121
            PK    K LM+V+  +N + +K+ L+D+GATHNF+++ EARRL L   K+   +KAVNS
Sbjct: 436 MPKTPQSKXLMYVETLVNGKATKA-LVDTGATHNFVSEDEARRLELQASKEGGWLKAVNS 495

Query: 122 EALPIVGVSKRVPFKIGVWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCL-VIT 181
            A P  GV++ V   IG+W G +D  V  MDDF +VLGM+FL + K +P+P  + + ++ 
Sbjct: 496 AAKPSHGVARGVTMHIGLWEGRVDFTVAPMDDFKMVLGMDFLQKVKAVPLPFLRSMAILE 555

Query: 182 DRNPTVIPASIKQPGNLRMISAIQLKRGL 210
           +  P ++P   +      M+SA+Q+K+GL
Sbjct: 556 EEKPCMVPTVTEGTPKTPMLSAMQVKKGL 568

[Close]
BLAST of CmoCh05G011930 vs. TrEMBL
Match: A5B9K1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036524 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.0e-31
Identity = 76/209 (36.36%), Postives = 125/209 (59.81%), Query Frame = 1 

Query: 2   LCKGPHKVSYCPHRASLTALQVSIQESNEARVETLLDKKEDHDNPRMGALKFLSALQRKV 61
           LC GPH    CP R +L A+               +++KE   + ++G+L+ L+AL+ K+
Sbjct: 199 LCDGPHWAWDCPKRKALNAM---------------IEEKEQEGDAKVGSLQLLNALKAKL 258

Query: 62  EPKEVIEKGLMFVDATINSQPSKSTLIDSGATHNFIADQEARRLRLTIGKDPRKMKAVNS 121
            PK    KGLM+++A +N + +K+ L+D+GATHNF+++ EARRL L   K+   +KA+NS
Sbjct: 259 MPKMPQSKGLMYMEALVNGKATKA-LVDTGATHNFVSENEARRLELQASKEGGWLKAINS 318

Query: 122 EALPIVGVSKRVPFKIGVWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCL-VIT 181
              P  GV++ +   IG W G +D +V  MDDF +VL M+FL   K +P+P  + + ++ 
Sbjct: 319 ATKPSHGVARGMTMHIGSWEGRVDFIVAPMDDFKMVLRMDFLQRVKAVPLPFLRSMAILE 378

Query: 182 DRNPTVIPASIKQPGNLRMISAIQLKRGL 210
           ++ P ++P   K      M+SA+Q+ +GL
Sbjct: 379 EKKPCMVPTVTKGTLKTPMLSAMQVMKGL 391

[Close]
BLAST of CmoCh05G011930 vs. TrEMBL
Match: A5BDH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001313 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.4e-31
Identity = 83/213 (38.97%), Postives = 124/213 (58.22%), Query Frame = 1 

Query: 2   LCKGPHKVSYCPHRASLTALQVSIQESNEARVETLLDKKEDHDNPRMGALKFLSALQRKV 61
           LC GPH    CP R +L A+               +++KE   + ++G+L+ L+ L+ K 
Sbjct: 381 LCDGPHWARDCPKRKALNAM---------------IEEKEQEGDAKVGSLQLLNXLKAKS 440

Query: 62  EPKEVIEKGLMFVDATINSQPSKSTLIDSGATHNFIADQEARRLRLTIGKDPRKMKAVNS 121
             K    K LM+V+A +N + +K+ L+D+GATHNF+A+ EARRL L   K+   +KAVNS
Sbjct: 441 MFKTPQSKRLMYVEALVNGKATKA-LVDTGATHNFVAEDEARRLELQASKEGGWLKAVNS 500

Query: 122 EALPIVGVSKRVPFKIGVWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVITD 181
            A P  GV++ V   IG W G +D  V  MDDF +VLGM+FL + K +P+P  + + I +
Sbjct: 501 AAKPSHGVARGVSMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVKAVPLPFLRSMAILE 560

Query: 182 RN-----PTVIPASIKQPGNLRMISAIQLKRGL 210
                  PTV   ++K P    M+SA+Q+K+GL
Sbjct: 561 EEKPCMVPTVTEGTLKTP----MLSAMQVKKGL 573

[Close]
BLAST of CmoCh05G011930 vs. NCBI nr
Match: gi|1009161831|ref|XP_015899105.1| (PREDICTED: uncharacterized protein LOC107432471 [Ziziphus jujuba])

HSP 1 Score: 208.0 bits (528), Expect = 1.6e-50
Identity = 107/211 (50.71%), Postives = 149/211 (70.62%), Query Frame = 1 

Query: 2   LCKGPHKVSYCPHRASLTALQVSI--QESNEARVETLLDKKEDHDNPRMGALKFLSALQR 61
           LC GPH+V  CPH+ SL+ALQ SI  QE    R E +   +E  D  ++GAL+FL+AL  
Sbjct: 187 LCNGPHRVGECPHKTSLSALQASIRSQEHEGGREEVV---EEGEDGAQVGALRFLNALNG 246

Query: 62  KV-EPKEVIEKGLMFVDATINSQPSKSTLIDSGATHNFIADQEARRLRLTIGKDPRKMKA 121
           +V + ++  EKGLMFVDATIN + +KS ++D+GATHNF ++ EARRL L + KD  +MKA
Sbjct: 247 QVVQARKTNEKGLMFVDATINGKAAKSVMVDTGATHNFCSESEARRLGLRLQKDAGQMKA 306

Query: 122 VNSEALPIVGVSKRVPFKIGVWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLV 181
           VNS+ALP VG++K+VP K+G W   +DL+VV MDDFDV+LGM+FL++ K IP+P A  L+
Sbjct: 307 VNSKALPTVGLAKQVPLKLGTWEDRVDLIVVPMDDFDVILGMDFLVKKKAIPIPAANSLL 366

Query: 182 ITDRNPTVIPASIKQPGNLRMISAIQLKRGL 210
           +      V+P   KQ  N +++SA Q K+G+
Sbjct: 367 MMGEQTGVVPVQRKQLNNPKLLSAFQFKKGV 394

[Close]
BLAST of CmoCh05G011930 vs. NCBI nr
Match: gi|1009175511|ref|XP_015868924.1| (PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba])

HSP 1 Score: 204.9 bits (520), Expect = 1.4e-49
Identity = 106/211 (50.24%), Postives = 149/211 (70.62%), Query Frame = 1 

Query: 2   LCKGPHKVSYCPHRASLTALQVSI--QESNEARVETLLDKKEDHDNPRMGALKFLSALQR 61
           LC GPH+V  CPH+ +L+ALQ SI  QE    R E +   +E  D  ++GAL+FL+AL  
Sbjct: 545 LCNGPHRVGECPHKTALSALQASIRSQEHEGGREEVV---EEGEDGAQVGALRFLNALNG 604

Query: 62  KV-EPKEVIEKGLMFVDATINSQPSKSTLIDSGATHNFIADQEARRLRLTIGKDPRKMKA 121
           +V + ++  EKGLMFVDA IN + +KS ++D+GATHNF ++ EARRL L + KD  +MKA
Sbjct: 605 QVVQARKTNEKGLMFVDAAINGKAAKSVMVDTGATHNFCSEIEARRLGLRLQKDAGQMKA 664

Query: 122 VNSEALPIVGVSKRVPFKIGVWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLV 181
           VNS+ALP VG++K+VP K+G W   +DL+VV MDDFDV+LGM+FL++ K IP+P A  L+
Sbjct: 665 VNSKALPTVGLAKQVPLKLGTWEDRVDLIVVPMDDFDVILGMDFLVKKKAIPIPAANSLL 724

Query: 182 ITDRNPTVIPASIKQPGNLRMISAIQLKRGL 210
           +      VIP   KQ  N +++SA+Q K+G+
Sbjct: 725 MMGEQTGVIPVQRKQLNNPKLLSALQFKKGV 752

[Close]
BLAST of CmoCh05G011930 vs. NCBI nr
Match: gi|1009181571|ref|XP_015872243.1| (PREDICTED: uncharacterized protein LOC107409324, partial [Ziziphus jujuba])

HSP 1 Score: 204.5 bits (519), Expect = 1.8e-49
Identity = 105/211 (49.76%), Postives = 149/211 (70.62%), Query Frame = 1 

Query: 2   LCKGPHKVSYCPHRASLTALQVSI--QESNEARVETLLDKKEDHDNPRMGALKFLSALQR 61
           LC GPH+V  CPH+ +L+ALQ SI  QE    R E +   +E  D  ++GAL+FL+AL  
Sbjct: 258 LCNGPHRVGECPHKTALSALQASIRSQEHEGGREEVV---EEGEDGAQVGALRFLNALNG 317

Query: 62  KV-EPKEVIEKGLMFVDATINSQPSKSTLIDSGATHNFIADQEARRLRLTIGKDPRKMKA 121
           +V + ++  EKGLMFVDA IN + +KS ++D+GATHNF ++ EARRL L + KD  +MKA
Sbjct: 318 QVVQARKTNEKGLMFVDAAINGKAAKSVMVDTGATHNFCSEIEARRLGLRLQKDAGQMKA 377

Query: 122 VNSEALPIVGVSKRVPFKIGVWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLV 181
           VNS+ALP VG++K+VP K+G W   +DL+VV MDDFDV+LGM+FL++ K IP+P A  L+
Sbjct: 378 VNSKALPTVGLAKQVPLKLGTWEDRVDLIVVPMDDFDVILGMDFLVKKKAIPIPAANSLL 437

Query: 182 ITDRNPTVIPASIKQPGNLRMISAIQLKRGL 210
           +      V+P   KQ  N +++SA+Q K+G+
Sbjct: 438 MMGEQTGVVPVQRKQLNNPKLLSALQFKKGV 465

[Close]
BLAST of CmoCh05G011930 vs. NCBI nr
Match: gi|1009180560|ref|XP_015871689.1| (PREDICTED: uncharacterized protein LOC107408784 [Ziziphus jujuba])

HSP 1 Score: 203.4 bits (516), Expect = 4.0e-49
Identity = 103/211 (48.82%), Postives = 148/211 (70.14%), Query Frame = 1 

Query: 2   LCKGPHKVSYCPHRASLTALQVSI--QESNEARVETLLDKKEDHDNPRMGALKFLSALQR 61
           LC GPH+   CPH+ +L+ALQ SI  QE    R E +   +E  D  ++GAL+FL+AL  
Sbjct: 211 LCNGPHRAGECPHKTALSALQASIRSQEHEGGREEVV---EEGEDGAQVGALRFLNALNG 270

Query: 62  KV-EPKEVIEKGLMFVDATINSQPSKSTLIDSGATHNFIADQEARRLRLTIGKDPRKMKA 121
           +V + ++  EKGLMFVDA IN + +KS ++D+GATHNF ++ EARRL L + KD  +MKA
Sbjct: 271 QVVQARKTNEKGLMFVDAAINGKAAKSVMVDTGATHNFCSETEARRLGLCLQKDAGQMKA 330

Query: 122 VNSEALPIVGVSKRVPFKIGVWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLV 181
           +NS+ALP VG++K+VP K+G W   +DL+VV MDDFDV+LGM+FL++ K IP+P A  L+
Sbjct: 331 INSKALPTVGLAKQVPLKLGTWEDRVDLIVVPMDDFDVILGMDFLVKKKAIPIPAANSLL 390

Query: 182 ITDRNPTVIPASIKQPGNLRMISAIQLKRGL 210
           +      V+P   KQ  N +++SA+Q K+G+
Sbjct: 391 MMGEQTGVVPVQRKQLNNPKLLSALQFKKGV 418

[Close]
BLAST of CmoCh05G011930 vs. NCBI nr
Match: gi|1009165187|ref|XP_015900908.1| (PREDICTED: uncharacterized protein LOC107434012 [Ziziphus jujuba])

HSP 1 Score: 193.7 bits (491), Expect = 3.2e-46
Identity = 99/211 (46.92%), Postives = 145/211 (68.72%), Query Frame = 1 

Query: 2   LCKGPHKVSYCPHRASLTALQVSI--QESNEARVETLLDKKEDHDNPRMGALKFLSALQR 61
           LC GPH+V  CPH+ +L+ALQ +I  QE    R E +   +E  D  ++GAL+FL+AL  
Sbjct: 363 LCNGPHRVGECPHKTALSALQAAIRSQEHEGGREEVV---EEGEDGAQVGALRFLNALNG 422

Query: 62  KV-EPKEVIEKGLMFVDATINSQPSKSTLIDSGATHNFIADQEARRLRLTIGKDPRKMKA 121
           +V + ++  EKGLM +DA IN + +KS ++D+GATHNF ++ E  RL L + KD  +MKA
Sbjct: 423 QVVQARKTNEKGLMLMDAAINGKAAKSVMVDTGATHNFCSEIEIERLGLRLQKDAGQMKA 482

Query: 122 VNSEALPIVGVSKRVPFKIGVWTGELDLVVVRMDDFDVVLGMEFLLEHKVIPMPLAKCLV 181
           VNS+ALP VG++K+VP K+G W   +DL+VV MDDFDV+LGM+FL++ K IP+P A  L+
Sbjct: 483 VNSKALPTVGLAKQVPLKLGTWEDRVDLIVVPMDDFDVILGMDFLVKKKAIPIPAANSLL 542

Query: 182 ITDRNPTVIPASIKQPGNLRMISAIQLKRGL 210
           +       +P   KQ  N +++SA+Q K+G+
Sbjct: 543 MMGEQTGEVPVQRKQLNNPKLLSALQFKKGV 570

The following BLAST results are available for this feature:
BLAST of CmoCh05G011930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh05G011930 vs. TrEMBL
Match NameE-valueIdentityDescription
A5B4X8_VITVI3.6e-3338.76Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020318 PE=4 SV=1[more]
A5AQF1_VITVI1.8e-3239.44Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014071 PE=4 SV=1[more]
A5BX03_VITVI2.4e-3237.80Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032357 PE=4 SV=1[more]
A5B9K1_VITVI2.0e-3136.36Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036524 PE=4 SV=1[more]
A5BDH9_VITVI3.4e-3138.97Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001313 PE=4 SV=1[more]
BLAST of CmoCh05G011930 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh05G011930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1009161831|ref|XP_015899105.1|1.6e-5050.71PREDICTED: uncharacterized protein LOC107432471 [Ziziphus jujuba][more]
gi|1009175511|ref|XP_015868924.1|1.4e-4950.24PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba][more]
gi|1009181571|ref|XP_015872243.1|1.8e-4949.76PREDICTED: uncharacterized protein LOC107409324, partial [Ziziphus jujuba][more]
gi|1009180560|ref|XP_015871689.1|4.0e-4948.82PREDICTED: uncharacterized protein LOC107408784 [Ziziphus jujuba][more]
gi|1009165187|ref|XP_015900908.1|3.2e-4646.92PREDICTED: uncharacterized protein LOC107434012 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G011930.1CmoCh05G011930.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domainunknownSSF50630Acid proteasescoord: 69..168
score: 3.8
NoneNo IPR availablePFAMPF13975gag-asp_proteascoord: 74..163
score: 3.9

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G011930Cucurbita pepo (Zucchini)cmocpeB721
CmoCh05G011930Cucurbita pepo (Zucchini)cmocpeB742
CmoCh05G011930Bottle gourd (USVL1VR-Ls)cmolsiB706
CmoCh05G011930Cucumber (Gy14) v2cgybcmoB243
CmoCh05G011930Melon (DHL92) v3.6.1cmomedB821
CmoCh05G011930Silver-seed gourdcarcmoB0405
CmoCh05G011930Silver-seed gourdcarcmoB0974
CmoCh05G011930Cucumber (Chinese Long) v3cmocucB0924
CmoCh05G011930Watermelon (97103) v2cmowmbB785
CmoCh05G011930Wax gourdcmowgoB0919
CmoCh05G011930Cucurbita moschata (Rifu)cmocmoB148
CmoCh05G011930Cucumber (Gy14) v1cgycmoB0362
CmoCh05G011930Cucurbita maxima (Rimu)cmacmoB190
CmoCh05G011930Cucurbita maxima (Rimu)cmacmoB787
CmoCh05G011930Wild cucumber (PI 183967)cmocpiB787
CmoCh05G011930Cucumber (Chinese Long) v2cmocuB783
CmoCh05G011930Melon (DHL92) v3.5.1cmomeB724
CmoCh05G011930Watermelon (Charleston Gray)cmowcgB700
CmoCh05G011930Watermelon (97103) v1cmowmB757