CmoCh05G011850 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G011850
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	TIR-NBS-LRR disease resistance protein
Location	Cmo_Chr05 : 9297724 .. 9302663 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAATCATCGACTTTGTTTCCAAATTTCAAGTGGAGTTATGATGTGTTTTTGAGTTTTAGAGGAGAGGATACTCGATCCAATTTCACCAGTCATCTTGACATGGCTTTGCGATAAAAGGGAGTCAACGTCCTCACAAACGACAACCTAAAAAGGGGTGAGAAAATTTTTGAATTCCTCTACGGATCTATAGAGGAAACTTTGATTTCTATTGTTATACTCTCTGAAAATTATGCATCTTCTTCCTAGTTCCTAGTGTCTGGATGAATTGGTGAAAATAATCGAGTGTAAGAAATCAAAGGGCCAAATAGTTTGGCCAATTTTCTATAAGGTAGATCCATATGATATACGAAAACAAATTGGAAGTTTTGGAGAAGCATTCACTACACATGAAGATAAGTTCAAGACGAAAATCCAAATTTGGAGGGAAGCTTTAACTCATGTTGCTAACCTAGTTGCTGTAATAGCCCAAAAATAAATAAAGAAATTAACAAATAAAAATAATTATAAAAAAAAATAGTTAAAATAATAAATAAATAAATAAAAATTAAAGAAGAAAAATATTTGGTAACCGATCCCTCCTCCTTCCTTCAATCTCTCACCACTCCTTCCCTAAAAATAAATCTTGGCAACAAATTAGGAATTTCTCTCTAAAAACAAAGGCAGATTTACCCCGAATTTCTTCTTCCTACAAAAACAAATAGAAAAAAAACAAAAGATTTAAACAGACTTAGTTCGGCCAAAAGAGATATGTCCAGGTCAGTGTGTTAAATCTTCCTTTTATTTTATTAAATAATACTAATTTGGTTACAGTTATTTAGTTTTGAATTAGAGATTAAATGAAAAGAATTCTGTATGAGGTTAGGAAATCAAAACCAATTATATTTTAAATCTACTAAATTGTTGCAATGATTTAGATTGTAATTTTATATGAATTATAGGAAAAGAATATAATCAAATGAATTCAATTAAAAACTAAGAATATAATTGTTAACTAAATAAGAAGGAAGACAAAGAAAATAAGAAAAAATGAAATAGAGATAGAAATCTAGAACACTGTTAACTGAAAAGAAAAATAATAATAAAAATAAAAAGGGAAGATTTGGAAGTAGGAATAGATTAACAAAATTGAATAATACCTTCTTAAAAATAATTACAGAAGAAGAAGGGAAGATTGAGGAAAGATTTGTTGAACACAATTTAAAAATAAAATAGGAAATATTAGAGGGCATGGAACTCCCTTAAATTTTGTCTAACCGTAAATATTAGAATTTTAACCATGTAAACGAGAGAAATAATTTGATAGAGTTCAAACTTGAAACTGATGTCATGAGCTCGCATAGGTTGACTTGGATTTCAAAGGACGGAATCGAACTTTCATTAAGGATATATTCGTGACAACGACTTAAGCTAACCAGGTAAGTGACCTTACTATCGGCATGGTTATATTGATGTTGACACGTGCCCTGTGGTTCTGCATGCGTCATATATATTGATATGTGTGAATTGTCTATGGATCGATGTGCTTCCTATATGTTATGTTATGTTATTATATGTGGTTTGTATGATAATAATTATGGTACGATGTGCTCAAGGATATGTTTGAGATAGAATACGAGAAGGATGCACAAAATGAAATGTAACGATAGAAGTAAGTTACGTTCATGAAACGTTAAGGTTATGTTACATACCGGAGTGCTATGGATAGGAGAGATTGATGAAAGAATACGGTTAGGTTATGGGTAGAAAGGGATAGGTTTGTGATAGATTGATAGAACGATAGTGTTATGGTAAGTTAGAGAACGATATGACTATGAAGTGTTTACGTTATGACCTGTTTATGATATGGTACATTGTATGCTAGATTATTGTGCTTAAGTACGAAATCATGTGAACGTGAATGTATGTTATGTATGCTGCTTAATTGATGTGATATGTTATGCATGTGACGATGTGTGGCCCTTGTACGAATATGGCTTGTTTGTATGAATATTTGAATGTAACTGTATGAATTGTATGACATGAAATACGGTAAATTGCATGAAACATAACCCCACTAGGAATATGTATATATGTAACGAAATGAGAATGAGAATGACATGTAAGCATGAAAACGTGATACGAGGTTATGTTCATTAATGATAACTGTAGGACTAGTGAGATCTCATGCATATTGTGTGTTCATGCATTTGGGGAGATACCCCTATCCCATCACGAGGGTACGGACGCGTACATCCAATGGCAGGACAACGATCGTTATGCCTTGCATAGCGCTGCCATGACGGTTCTAGTTTTAACGGGTCCCGGTATAAGGGCTCCCAGAGTATGCCCACCGGCTAGGGACAGCGGTGTGCGAACTAGCTGGTGAGCCCATACTCGCATGTATGGGCTGCATGTAGAGTATATGGTACACGTCCACGATTATCTGTTAGGATTACACCGTAGGGAAAACGAAACGAAACGAAAGATAGGTCCCATCATTTCATTGCATGTGATTGTTGCATTTAACCCCAATAGTGGGGTCACTTACTGAGTATTTCTTTAAATACTCAAGCCATGTGCTACTACATTTTTCAGGTTAAGGCAAGGCATTCCTGTACGGCTGACGACAGTATCGCAACTCGAGATCATGGCACATGCATAGGATAGTGGTATTTATTTTCTTAGACTTAGGATAGAATAGGATGTTTTAAACTTAAATGCTTATTTATTTTATTTCAGGTCTTTTGTTGCGTCGTTTTAAAGATGTTTTCGAAACACGTAAGTCTATGGCTGTGTTTTAAGTTAAAGGTTATGTTCTATGGAATTTAAATGAAGTCTTCTGCATTCAATGTTTATGGTACGTATACAGTAGCGACCTTAAATTAAGTAGAAAATTTTGGATCGTTACAGTTGGGATCTAAGAACCAGGTATATAATGTTAAGAAATTTAACTCCATCTACTATTGCATCCAATATCTATCATCTCTAATTCTAATATTACATGGTTAACAACCGGAAGAAAGCTGATCTTATTCAAGATCTTGTTAAAAAAATATTGTCGATATTAAATCGTACTTGCACGCCCTTATATGTAGAGAAGTATCCTATTGAAATTGATTCACAACTAGAAAAAATGATGTTACACTACGATTATTGGACACAAGATGAGTCTAGTATTGGTGTTTACATGGTGGGGATATATGGGATTGGAGGCATTGGTAAGACGACTTTGGCCAAAGCTTTATACAACAAAATTGCTAACCAATTTGAAGCTTGCTTCTTTCTATCCAATGTTAAGGGAGCTTCAAAGCAATTCAATGGCCTTGTTCAACTACAGAAAATCCTACTCCATGAAATCTTAAAGGAAGATTTGGAGGTTGGAAATCTTGAAAACGGAATTAGCATCATAAGAAATAAATTGTGTTAACACAAAAAAAAAAAGTTGCTCTTGACGATGTGGATAAACTTGAGCAGTTGGAAGCATTGGTTGGTGGGCGTATCATTTACTTTCTATCCATGAATTTGATCCAGAGTATCATATTCAATGAAAGAAGGAATAGAAATGATGACCAAACCCCCCCCCCCCCTCCTTTTTTTGTTCTCTTCCATGTATTTTCGGATTGTCAAATGTCGAAGCATGTTGATCTTAGGTACTCTACTTTATTAGGGAAAATTCCTGATTTCTCTTCCGAATAAAATTAAGAATCATTCCTAAGTCAATTTTTTCTCTTGGTAAGCTTGTTACCTTAGACCTTAATCATTGTTCGAATGTTAAAAAGCTTCAAAGGCACCCTATATTAAAGTCTCTGAAAATTTTGAAGCTTAATTACGAAAAAAACTTGAGGAACTTCCAAACTTTTCTCCATTATCAAACCTTCAAAACTTATATTTCAACCATGGCACAAAATTAATAGCGATTCTCGAGTCTATTAGAGCTTTAGATAGTCTTCTTACCTTAAACCTTACAAAATGCACTAACCTTGAAGAGCTTCTAAGCTACTTTGAGTCAAAGTCCCTTCAATATTTAAAGCTATCTGGGTGTTCTAAGCTCGAAAAGTTTCCAAAAATCGCTGAAAACATGAAATCTGTAAGGTTTTTGGATTTGGATTTTAAGGCCATAAAGGAGCTAGACCTTGAAGGAGAACAAATTCTCTAATCTAATGTTGTCTAAAAACAAATCCTCGAGTCCACCTTCATTTCTCCATAAGTTTATGCCGTTATGGAATCTCCAATCAAGAAATTCAAACTTAGATCGTTGAGTAGAAGTCCAGTCAAGATCAAGCACAAGCAGGTTCATCTCTTCTCATTTCAATTCTTCTTTGAGTTTGTAGTGTTCTTATGCTTTATAGGTCATTATAAGTATTTATAGACATTTCATTCGAATGAAGGAAGAAATTTTGAGAAGGTTCAACTATCGTACTATATCAAATTCAATGAAAGTTAGCTTTCTACACTATCTCAATATGGAAACAACTTTGACTATCTATGTTTTGAGACATTGTGATGTGACTTTTGATGAAAATACTATGTACCAGGACAAAGAAAAGAAAAGCTCTGAGATTACGAAGCAAGTGGGAGTTGAACTTGAGTTGCAAAAAAACTCATCGGTGTTATTACATTAGAAATTTAAAAAACTCCTAAAACTCCTAAAACTGATGCCGAAGAACTAGAGGTACATTAAGCGACACCTAAGAAAGTGTTGAGAAGATCATCTAGAACTATCACGGGATAGATATTTCATCTTTATTACATTGTCGGTAGCTCCATCTCATAGTCACCATGGCTGGCCATGATAAGATCTTAATTTCAATTCCCAGATGAATGGCTACACTTGGACATATTAGGACAGTAAAGATGTGATGGAGAATAAGTTATGTAATAGAACTTGCAACGCCAAACGTGAAGAATTTGCAAAATCTGTACAGAAGTACTACAAGAAGCTGACCGAATCATGA

mRNA sequence

ATGGCAGAATCATCGACTTTGTTTCCAAATTTCAAGTGGAGTTATGATGGAGTCAACGTCCTCACAAACGACAACCTAAAAAGGGGTGAGAAAATTTTTGAATTCCTCTACGGATCTATAGAGGAAACTTTGATTTCTATTTGTCTGGATGAATTGGTGAAAATAATCGAGTGTAAGAAATCAAAGGGCCAAATAGTTTGGCCAATTTTCTATAAGATCCATATGATATACGAAAACAAATTGGAAGTTTTGGAGAAGCATTCACTACACATGAAGATAAAGAAGTATCCTATTGAAATTGATTCACAACTAGAAAAAATGATGTTACACTACGATTATTGGACACAAGATGAGTCTAGTATTGGTGTTTACATGGTGGGGATATATGGGATTGGAGGCATTGGTAAGACGACTTTGGCCAAAGCTTTATACAACAAAATTGCTAACCAATTTGAAGCTTGCTTCTTTCTATCCAATGTTAAGGGAGCTTCAAAGCAATTCAATGGCCTTGTTCAACTACAGAAAATCCTACTCCATGAAATCTTAAAGGAAGATTTGGAGGACAGTAAAGATGTGATGGAGAATAAGTTATGTAATAGAACTTGCAACGCCAAACGTGAAGAATTTGCAAAATCTGTACAGAAGTACTACAAGAAGCTGACCGAATCATGA

Coding sequence (CDS)

ATGGCAGAATCATCGACTTTGTTTCCAAATTTCAAGTGGAGTTATGATGGAGTCAACGTCCTCACAAACGACAACCTAAAAAGGGGTGAGAAAATTTTTGAATTCCTCTACGGATCTATAGAGGAAACTTTGATTTCTATTTGTCTGGATGAATTGGTGAAAATAATCGAGTGTAAGAAATCAAAGGGCCAAATAGTTTGGCCAATTTTCTATAAGATCCATATGATATACGAAAACAAATTGGAAGTTTTGGAGAAGCATTCACTACACATGAAGATAAAGAAGTATCCTATTGAAATTGATTCACAACTAGAAAAAATGATGTTACACTACGATTATTGGACACAAGATGAGTCTAGTATTGGTGTTTACATGGTGGGGATATATGGGATTGGAGGCATTGGTAAGACGACTTTGGCCAAAGCTTTATACAACAAAATTGCTAACCAATTTGAAGCTTGCTTCTTTCTATCCAATGTTAAGGGAGCTTCAAAGCAATTCAATGGCCTTGTTCAACTACAGAAAATCCTACTCCATGAAATCTTAAAGGAAGATTTGGAGGACAGTAAAGATGTGATGGAGAATAAGTTATGTAATAGAACTTGCAACGCCAAACGTGAAGAATTTGCAAAATCTGTACAGAAGTACTACAAGAAGCTGACCGAATCATGA

Homology

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BLAST of CmoCh05G011850 vs. Swiss-Prot
Match: TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08
Identity = 70/256 (27.34%), Postives = 113/256 (44.14%), Query Frame = 1


Query: 17  GVNVLTNDN-LKRGEKIFEFLYGSIEETLISI------------CLDELVKIIECKKSKG 76
           G+    +D  L+ G  I   L  +IEE+  +I            CL+ELVKI+ECK    
Sbjct: 39  GIKTFQDDKRLEYGATIPGELCKAIEESQFAIVVFSENYATSRWCLNELVKIMECKTRFK 98

Query: 77  QIVWPIFYKIHMIY-----ENKLEVLEKHSLHMK-------------------------- 136
           Q V PIFY +   +     E+  +  E+H    K                          
Sbjct: 99  QTVIPIFYDVDPSHVRNQKESFAKAFEEHETKYKDDVEGIQRWRIALNEAANLKGSCDNR 158

Query: 137 -------IKKYPIEIDSQLEKMMLHY--------DYWTQDESSI-----GVYMVGIYGIG 196
                  I++   +I S+L K+ L Y         +  + ES +     GV ++GI+G+G
Sbjct: 159 DKTDADCIRQIVDQISSKLCKISLSYLQNIVGIDTHLEKIESLLEIGINGVRIMGIWGMG 218

Query: 197 GIGKTTLAKALYNKI------ANQFEACFFLSNVKGASKQFNGLVQLQKILLHEILKE-- 198
           G+GKTT+A+A+++ +      + QF+   FL ++K   +   G+  LQ  LL E+L+E  
Sbjct: 219 GVGKTTIARAIFDTLLGRMDSSYQFDGACFLKDIK---ENKRGMHSLQNALLSELLREKA 278

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BLAST of CmoCh05G011850 vs. Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.6e-08
Identity = 53/183 (28.96%), Postives = 89/183 (48.63%), Query Frame = 1


Query: 46  SICLDELVKIIECKKSKGQIVWPIFYKIHMIYENKLEVLEK---HSLHMKIKKYPIEIDS 105
           ++ LD+LVK+++C+K+K Q+V P+ Y +       L  L+     S+H   K+     DS
Sbjct: 67  TVSLDKLVKVLDCQKNKDQVVVPVLYGVRSSETEWLSALDSKGFSSVHHSRKECS---DS 126

Query: 106 QLEKMMLH--------------YDYWTQDESSIG-----VYMVGIYGIGGIGKTTLAKAL 165
           QL K  +               Y    + E  I      +  VGI+G+ GIGKTTLAKA+
Sbjct: 127 QLVKETVRDVYEKLFYMERIGIYSKLLEIEKMINKQPLDIRCVGIWGMPGIGKTTLAKAV 186

Query: 166 YNKIANQFEACFFLSNVKGASKQFNGLVQLQKILLHEILKEDLEDSKDVMENKLCNRTCN 207
           +++++ +F+A  F+ +   A ++      +  +L  + LKE+   S  V +  L     N
Sbjct: 187 FDQMSGEFDAHCFIEDYTKAIQEKG----VYCLLEEQFLKENAGASGTVTKLSLLRDRLN 242

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BLAST of CmoCh05G011850 vs. TrEMBL
Match: A0A0A0LLL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020940 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-28
Identity = 73/126 (57.94%), Postives = 90/126 (71.43%), Query Frame = 1


Query: 73  IHMIYENKLEVLEKHSLHMKIKKYPIEIDSQLEKMMLH---------YDYWTQDE--SSI 132
           I  + +  L  + +    + + KYP+ IDSQLE M  H         + YWTQ+E  S I
Sbjct: 167 IRDLVKEVLSTINRTRTPLYVAKYPVGIDSQLEYMKFHSHHLNKGNKFQYWTQNEYESDI 226

Query: 133 GVYMVGIYGIGGIGKTTLAKALYNKIANQFEACFFLSNVKGASKQFNGLVQLQKILLHEI 188
           GVYMVGIYGIGG+GKTTLAKALYNKIA+QFE C FLSNV+ AS QFNGLVQLQ+ LL+EI
Sbjct: 227 GVYMVGIYGIGGLGKTTLAKALYNKIASQFEGCCFLSNVRQASNQFNGLVQLQQNLLYEI 286

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BLAST of CmoCh05G011850 vs. TrEMBL
Match: D9I8I4_CUCSA (TIR-NBS-LRR-AAA+ATPase class resistance protein OS=Cucumis sativus PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.6e-26
Identity = 74/135 (54.81%), Postives = 90/135 (66.67%), Query Frame = 1


Query: 81  LEVLEKHSLHMKIKKYPIEIDSQLEKMML------------HYDYWTQDESSIGVYMVGI 140
           L VL +    + + KYP+ IDS+LE M L            HY    + ES  GVYMVG+
Sbjct: 204 LSVLNRTCTPLYVAKYPVGIDSKLEYMKLRSHNLFEKSNKFHYRKQHEYESDTGVYMVGL 263

Query: 141 YGIGGIGKTTLAKALYNKIANQFEACFFLSNVKGASKQFNGLVQLQKILLHEILKED--- 199
           YGIGGIGKTTLAKALYNKIA+QFEAC FLSNV+ ASKQFNGL QLQ+ LL+EIL  D   
Sbjct: 264 YGIGGIGKTTLAKALYNKIASQFEACCFLSNVREASKQFNGLAQLQETLLYEILTVDLKV 323

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BLAST of CmoCh05G011850 vs. TrEMBL
Match: A0A0A0LJM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022270 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.6e-26
Identity = 73/135 (54.07%), Postives = 89/135 (65.93%), Query Frame = 1


Query: 81  LEVLEKHSLHMKIKKYPIEIDSQLEKMML------------HYDYWTQDESSIGVYMVGI 140
           L VL +    + + KYP+ IDS+LE M L            HY    + ES  GVYMVG+
Sbjct: 174 LSVLNRTCTPLYVAKYPVGIDSKLEYMKLRSHSLFEKSNKFHYRKQHEYESDTGVYMVGL 233

Query: 141 YGIGGIGKTTLAKALYNKIANQFEACFFLSNVKGASKQFNGLVQLQKILLHEILKED--- 199
           YGIGGIGKTTLAKALYNKIA+QFE C FLSNV+ ASKQFNGL QLQ+ LL+EIL  D   
Sbjct: 234 YGIGGIGKTTLAKALYNKIASQFEGCCFLSNVREASKQFNGLAQLQETLLYEILTVDLKV 293

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BLAST of CmoCh05G011850 vs. TrEMBL
Match: E7CHD3_CUCSA (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.6e-26
Identity = 73/135 (54.07%), Postives = 89/135 (65.93%), Query Frame = 1


Query: 81  LEVLEKHSLHMKIKKYPIEIDSQLEKMML------------HYDYWTQDESSIGVYMVGI 140
           L VL +    + + KYP+ IDS+LE M L            HY    + ES  GVYMVG+
Sbjct: 174 LSVLNRTCTPLYVAKYPVGIDSKLEYMKLRSHSLFEKSNKFHYRKQHEYESDTGVYMVGL 233

Query: 141 YGIGGIGKTTLAKALYNKIANQFEACFFLSNVKGASKQFNGLVQLQKILLHEILKED--- 199
           YGIGGIGKTTLAKALYNKIA+QFE C FLSNV+ ASKQFNGL QLQ+ LL+EIL  D   
Sbjct: 234 YGIGGIGKTTLAKALYNKIASQFEGCCFLSNVREASKQFNGLAQLQETLLYEILTVDLKV 293

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BLAST of CmoCh05G011850 vs. TrEMBL
Match: E5GB33_CUCME (TIR-NBS-LRR disease resistance protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.0e-25
Identity = 71/142 (50.00%), Postives = 92/142 (64.79%), Query Frame = 1


Query: 76  IYENKLEVLEKHSLHMKIKKYPIEIDSQLEKMML------------HYDYWTQDESSIGV 135
           I +  L  L +  + + + KYP+ IDS+LE + L            HY    + E   G+
Sbjct: 169 IVKKVLSTLNRTCMPLYVAKYPVGIDSKLEYIKLRSHNMFEKNNKFHYRTQHEYEFDTGI 228

Query: 136 YMVGIYGIGGIGKTTLAKALYNKIANQFEACFFLSNVKGASKQFNGLVQLQKILLHEILK 195
           YMVGIYGIGGIGKTTLAKALYNKIA+QFE C FLSNV+ ASKQFNGL QLQ+ LL+EIL 
Sbjct: 229 YMVGIYGIGGIGKTTLAKALYNKIASQFEGCCFLSNVREASKQFNGLAQLQESLLYEILM 288

Query: 196 ED-----LEDSKDVMENKLCNR 201
            D     L+   +++ N+LC++
Sbjct: 289 VDLKVVNLDRGINIIRNRLCSK 310

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BLAST of CmoCh05G011850 vs. TAIR10
Match: AT1G27170.1 (AT1G27170.1 transmembrane receptors;ATP binding)

HSP 1 Score: 75.5 bits (184), Expect = 4.7e-14
Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = 1


Query: 92  KIKKYPIEIDSQLEKMMLHYDYWTQDESSIGVYMVGIYGIGGIGKTTLAKALYNKIANQF 151
           K+ ++ + ++S L+ +    D     ESS GV ++G+YG+GGIGKTTLAKA YNKI   F
Sbjct: 184 KVGEFIVGLESPLKDLTGLID----TESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNF 243

Query: 152 EACFFLSNVKGASKQFNGLVQLQKILLHEI--LKEDLED 189
           E   F+S+++  S   NGLV LQK L+ E+  L  ++ED
Sbjct: 244 EQRAFISDIRERSSAENGLVTLQKTLIKELFRLVPEIED 278

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BLAST of CmoCh05G011850 vs. TAIR10
Match: AT1G27180.1 (AT1G27180.1 disease resistance protein (TIR-NBS-LRR class), putative)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-12
Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = 1


Query: 93  IKKYPIEIDSQLEKMMLHYDYWTQDESSIGVYMVGIYGIGGIGKTTLAKALYNKIANQFE 152
           +  Y + ++S ++ +M  ++     ESS G+ ++G+YG+GGIGKTTLAKA YNKI   F 
Sbjct: 358 VADYTVGLESPIKDLMKLFN----TESSSGIQVMGLYGMGGIGKTTLAKAFYNKIIVNFN 417

Query: 153 A-CFFLSNVKGASKQFNGLVQLQKILLHEI--LKEDLED 189
               F+ +V+G S   +GLV LQK L+ E+  L  ++ED
Sbjct: 418 RHRVFIESVRGKSSDQDGLVNLQKTLIKELFRLVPEIED 452

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BLAST of CmoCh05G011850 vs. TAIR10
Match: AT5G41740.2 (AT5G41740.2 Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 65.9 bits (159), Expect = 3.7e-11
Identity = 63/221 (28.51%), Postives = 110/221 (49.77%), Query Frame = 1


Query: 17  GVNVLTNDNLKRGEKIFEFLYGSIEETLISI------------CLDELVKIIECKKSKGQ 76
           G+    + N++RG+ I   L   I+E  +SI            CLDELV+I++CK++ GQ
Sbjct: 43  GITTFNDQNIERGQTIGPELIQGIKEARVSIVVLSKNYASSSWCLDELVEILKCKEALGQ 102

Query: 77  IVWP--IFYK------------IHMIYENKLE----VLEKHSL-----HMKIKKYPIEID 136
           IV    +F K            + + + N L     +  +HSL        I+K   ++ 
Sbjct: 103 IVMTSGVFGKAFEKTCQGKNEEVKIRWRNALAHVATIAGEHSLNWDNEAKMIQKIATDVS 162

Query: 137 SQLE-------KMMLHYDYWTQDESSI------GVYMVGIYGIGGIGKTTLAKALY-NKI 186
            +L        + M+  +   +  +S+       V M+GI+G  GIGKTT+A+AL+ +++
Sbjct: 163 DKLNLTPSRDFEGMVGMEAHLKRLNSLLCLESDEVKMIGIWGPAGIGKTTIARALFDDRL 222

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BLAST of CmoCh05G011850 vs. TAIR10
Match: AT5G40100.1 (AT5G40100.1 Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 65.5 bits (158), Expect = 4.8e-11
Identity = 38/107 (35.51%), Postives = 67/107 (62.62%), Query Frame = 1


Query: 98  IEIDSQLEKMMLHYDYWTQDESSIGVYMVGIYGIGGIGKTTLAKALYNKIANQFEACFFL 157
           + +D+ L+ +    D    D ++  V M+GI+G+GGIGKTT+AK LY+++++QF A +F 
Sbjct: 186 VGVDTHLQGLKSLLD---MDSNNDEVRMIGIWGMGGIGKTTIAKCLYDQLSSQFTASYFT 245

Query: 158 SNVKGASKQFNGLVQLQKILLHEILKEDL-----EDSKDVMENKLCN 200
            ++KG  K+ + L+ LQ  LL+  L +D+     E  ++V+  +L N
Sbjct: 246 QDIKGIHKELD-LLHLQNRLLYNTLGDDIMPWSVEAGREVIAARLGN 288

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BLAST of CmoCh05G011850 vs. TAIR10
Match: AT5G17680.1 (AT5G17680.1 disease resistance protein (TIR-NBS-LRR class), putative)

HSP 1 Score: 65.1 bits (157), Expect = 6.3e-11
Identity = 70/251 (27.89%), Postives = 111/251 (44.22%), Query Frame = 1


Query: 17  GVNVLTND-NLKRGEKIFEFLYGSIEETLISI------------CLDELVKIIECKKSKG 76
           G+    +D +L+RG+ I   L  +I+ +  +I            CLDEL+KI+EC K   
Sbjct: 45  GIKAFRDDLDLQRGKSISPELIDAIKGSRFAIVVVSRNYAASSWCLDELLKIMECNK--- 104

Query: 77  QIVWPIFYKIHMIYENKL-----EVLEKHSLHMKIKKYPIEI---------------DSQ 136
             + PIFY++      +      E +E HS   K+ K+   +               DS+
Sbjct: 105 DTIVPIFYEVDPSDVRRQRGSFGEDVESHSDKEKVGKWKEALKKLAAISGEDSRNWDDSK 164

Query: 137 LEKMM-------LHYDYWTQDESSIG------------------VYMVGIYGIGGIGKTT 196
           L K +       L    W   +  IG                  V M+GI+G+GG+GKTT
Sbjct: 165 LIKKIVKDISDKLVSTSWDDSKGLIGMSSHMDFLQSMISIVDKDVRMLGIWGMGGVGKTT 224

Query: 197 LAKALYNKIANQFEACFFLSNVKGASKQFNGLVQLQKILLHEILKEDLEDSKDVMENKLC 210
           +AK LYN+++ QF+   F+ NVK    ++ G+ +LQ   L  + +   E  K+   +  C
Sbjct: 225 IAKYLYNQLSGQFQVHCFMENVKEVCNRY-GVRRLQVEFLCRMFQ---ERDKEAWSSVSC 284

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BLAST of CmoCh05G011850 vs. NCBI nr
Match: gi|778666722|ref|XP_011648798.1| (PREDICTED: TMV resistance protein N-like [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 2.4e-28
Identity = 73/126 (57.94%), Postives = 90/126 (71.43%), Query Frame = 1


Query: 73  IHMIYENKLEVLEKHSLHMKIKKYPIEIDSQLEKMMLH---------YDYWTQDE--SSI 132
           I  + +  L  + +    + + KYP+ IDSQLE M  H         + YWTQ+E  S I
Sbjct: 167 IRDLVKEVLSTINRTRTPLYVAKYPVGIDSQLEYMKFHSHHLNKGNKFQYWTQNEYESDI 226

Query: 133 GVYMVGIYGIGGIGKTTLAKALYNKIANQFEACFFLSNVKGASKQFNGLVQLQKILLHEI 188
           GVYMVGIYGIGG+GKTTLAKALYNKIA+QFE C FLSNV+ AS QFNGLVQLQ+ LL+EI
Sbjct: 227 GVYMVGIYGIGGLGKTTLAKALYNKIASQFEGCCFLSNVRQASNQFNGLVQLQQNLLYEI 286

[Close]

BLAST of CmoCh05G011850 vs. NCBI nr
Match: gi|298953299|gb|ADI99934.1| (TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 2.3e-26
Identity = 74/135 (54.81%), Postives = 90/135 (66.67%), Query Frame = 1


Query: 81  LEVLEKHSLHMKIKKYPIEIDSQLEKMML------------HYDYWTQDESSIGVYMVGI 140
           L VL +    + + KYP+ IDS+LE M L            HY    + ES  GVYMVG+
Sbjct: 204 LSVLNRTCTPLYVAKYPVGIDSKLEYMKLRSHNLFEKSNKFHYRKQHEYESDTGVYMVGL 263

Query: 141 YGIGGIGKTTLAKALYNKIANQFEACFFLSNVKGASKQFNGLVQLQKILLHEILKED--- 199
           YGIGGIGKTTLAKALYNKIA+QFEAC FLSNV+ ASKQFNGL QLQ+ LL+EIL  D   
Sbjct: 264 YGIGGIGKTTLAKALYNKIASQFEACCFLSNVREASKQFNGLAQLQETLLYEILTVDLKV 323

[Close]

BLAST of CmoCh05G011850 vs. NCBI nr
Match: gi|778666836|ref|XP_011648823.1| (PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis sativus])

HSP 1 Score: 126.3 bits (316), Expect = 6.6e-26
Identity = 73/135 (54.07%), Postives = 89/135 (65.93%), Query Frame = 1


Query: 81  LEVLEKHSLHMKIKKYPIEIDSQLEKMML------------HYDYWTQDESSIGVYMVGI 140
           L VL +    + + KYP+ IDS+LE M L            HY    + ES  GVYMVG+
Sbjct: 174 LSVLNRTCTPLYVAKYPVGIDSKLEYMKLRSHSLFEKSNKFHYRKQHEYESDTGVYMVGL 233

Query: 141 YGIGGIGKTTLAKALYNKIANQFEACFFLSNVKGASKQFNGLVQLQKILLHEILKED--- 199
           YGIGGIGKTTLAKALYNKIA+QFE C FLSNV+ ASKQFNGL QLQ+ LL+EIL  D   
Sbjct: 234 YGIGGIGKTTLAKALYNKIASQFEGCCFLSNVREASKQFNGLAQLQETLLYEILTVDLKV 293

[Close]

BLAST of CmoCh05G011850 vs. NCBI nr
Match: gi|700205788|gb|KGN60907.1| (hypothetical protein Csa_2G022270 [Cucumis sativus])

HSP 1 Score: 126.3 bits (316), Expect = 6.6e-26
Identity = 73/135 (54.07%), Postives = 89/135 (65.93%), Query Frame = 1


Query: 81  LEVLEKHSLHMKIKKYPIEIDSQLEKMML------------HYDYWTQDESSIGVYMVGI 140
           L VL +    + + KYP+ IDS+LE M L            HY    + ES  GVYMVG+
Sbjct: 174 LSVLNRTCTPLYVAKYPVGIDSKLEYMKLRSHSLFEKSNKFHYRKQHEYESDTGVYMVGL 233

Query: 141 YGIGGIGKTTLAKALYNKIANQFEACFFLSNVKGASKQFNGLVQLQKILLHEILKED--- 199
           YGIGGIGKTTLAKALYNKIA+QFE C FLSNV+ ASKQFNGL QLQ+ LL+EIL  D   
Sbjct: 234 YGIGGIGKTTLAKALYNKIASQFEGCCFLSNVREASKQFNGLAQLQETLLYEILTVDLKV 293

[Close]

BLAST of CmoCh05G011850 vs. NCBI nr
Match: gi|315507085|gb|ADU33178.1| (putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus])

HSP 1 Score: 126.3 bits (316), Expect = 6.6e-26
Identity = 73/135 (54.07%), Postives = 89/135 (65.93%), Query Frame = 1


Query: 81  LEVLEKHSLHMKIKKYPIEIDSQLEKMML------------HYDYWTQDESSIGVYMVGI 140
           L VL +    + + KYP+ IDS+LE M L            HY    + ES  GVYMVG+
Sbjct: 174 LSVLNRTCTPLYVAKYPVGIDSKLEYMKLRSHSLFEKSNKFHYRKQHEYESDTGVYMVGL 233

Query: 141 YGIGGIGKTTLAKALYNKIANQFEACFFLSNVKGASKQFNGLVQLQKILLHEILKED--- 199
           YGIGGIGKTTLAKALYNKIA+QFE C FLSNV+ ASKQFNGL QLQ+ LL+EIL  D   
Sbjct: 234 YGIGGIGKTTLAKALYNKIASQFEGCCFLSNVREASKQFNGLAQLQETLLYEILTVDLKV 293

The following BLAST results are available for this feature:

BLAST of CmoCh05G011850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TMVRN_NICGU	1.2e-08	27.34	TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1	[more]
WRK16_ARATH	3.6e-08	28.96	Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=...	[more]

BLAST of CmoCh05G011850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLL0_CUCSA	1.7e-28	57.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020940 PE=4 SV=1	[more]
D9I8I4_CUCSA	1.6e-26	54.81	TIR-NBS-LRR-AAA+ATPase class resistance protein OS=Cucumis sativus PE=4 SV=1	[more]
A0A0A0LJM0_CUCSA	4.6e-26	54.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022270 PE=4 SV=1	[more]
E7CHD3_CUCSA	4.6e-26	54.07	Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus PE=4 SV=1	[more]
E5GB33_CUCME	3.0e-25	50.00	TIR-NBS-LRR disease resistance protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]

BLAST of CmoCh05G011850 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27170.1	4.7e-14	44.44	transmembrane receptors;ATP binding	[more]
AT1G27180.1	2.0e-12	41.41	disease resistance protein (TIR-NBS-LRR class), putative	[more]
AT5G41740.2	3.7e-11	28.51	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT5G40100.1	4.8e-11	35.51	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT5G17680.1	6.3e-11	27.89	disease resistance protein (TIR-NBS-LRR class), putative	[more]

BLAST of CmoCh05G011850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778666722\|ref\|XP_011648798.1\|	2.4e-28	57.94	PREDICTED: TMV resistance protein N-like [Cucumis sativus]	[more]
gi\|298953299\|gb\|ADI99934.1\|	2.3e-26	54.81	TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]	[more]
gi\|778666836\|ref\|XP_011648823.1\|	6.6e-26	54.07	PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis sativus]	[more]
gi\|700205788\|gb\|KGN60907.1\|	6.6e-26	54.07	hypothetical protein Csa_2G022270 [Cucumis sativus]	[more]
gi\|315507085\|gb\|ADU33178.1\|	6.6e-26	54.07	putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000157	TIR_dom
IPR002182	NB-ARC
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0043531	ADP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007165	signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G011850.1	CmoCh05G011850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 48..80 score: 1.
IPR002182	NB-ARC	PFAM	PF00931	NB-ARC	coord: 121..198 score: 1.
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 123..173 score: 1.
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 122..203 score: 1.4
None	No IPR available	PANTHER	PTHR11017	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	coord: 17..194 score: 3.8
None	No IPR available	PANTHER	PTHR11017:SF169	DISEASE RESISTANCE PROTEIN-RELATED	coord: 17..194 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G011850	Cucumber (Gy14) v2	cgybcmoB243
CmoCh05G011850	Melon (DHL92) v3.6.1	cmomedB821
CmoCh05G011850	Silver-seed gourd	carcmoB0974
CmoCh05G011850	Cucumber (Chinese Long) v3	cmocucB0924
CmoCh05G011850	Watermelon (97103) v2	cmowmbB785
CmoCh05G011850	Cucurbita moschata (Rifu)	cmocmoB148
CmoCh05G011850	Cucumber (Gy14) v1	cgycmoB0179
CmoCh05G011850	Cucurbita maxima (Rimu)	cmacmoB190
CmoCh05G011850	Cucurbita maxima (Rimu)	cmacmoB787
CmoCh05G011850	Wild cucumber (PI 183967)	cmocpiB787
CmoCh05G011850	Cucumber (Chinese Long) v2	cmocuB783
CmoCh05G011850	Melon (DHL92) v3.5.1	cmomeB724
CmoCh05G011850	Watermelon (Charleston Gray)	cmowcgB700
CmoCh05G011850	Watermelon (97103) v1	cmowmB757
CmoCh05G011850	Cucurbita pepo (Zucchini)	cmocpeB721
CmoCh05G011850	Cucurbita pepo (Zucchini)	cmocpeB742
CmoCh05G011850	Bottle gourd (USVL1VR-Ls)	cmolsiB706