CmoCh05G011820 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G011820
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Disease resistance protein (TIR-NBS-LRR class), putative
Location	Cmo_Chr05 : 9281386 .. 9283596 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAGTCTCTCAAAGATTTGAATCTCTCTTATTGCAATAAACTTGAGGAACTTCTAGACTTGTCCGCACTATCAAACCTTGAAATATTGGATCTCAATTACTGCACAAATTTAAGAATAATTTACTCGCTTGGATCTTTAGATAAGCTTGTTTTCTTATTCTTTCATCATTGTTCGAACCTTAAAAAGCTTCCAAACTACCTCATGTTGAAGTCTCTTGAATATTTGGATCTCTCTTATTGCAATAAACTTGAGGAAAGAGGGAGGGAGATTGAGGAAAGATTTGTTAAACAGTATTTAGTAATAAAAGGAAATATCGCCCCTCTAAATTTTGTCTAACAGAAAACATCAAAATTTTTATCAGCGGGCAGGGAGCTTCTTTAAATTTTGTCTAATAGAAAAGATCAAAATTTTAAGATGGCCAATGAAAATTAGGGAAATAATTTTATAGAGTTCATACTTGAAACTGATGTCATGAGCTCATATAGGTTGACTCGGATTTCAAAGGACGGAATCGAACTTTCATTAAAGATATATTTGTGACAATGACTTAAGCGAGCCAGGTAAGTGACCTTACTATCGACATGGTTATATTTGATGTTGACACGTGCCCTGTGGTTCTGTACGTGTCATATATATTGATATGTGTGAATTGTTTGTAAATCGATATGCTTCCTATATGTTATGTTATGTTATAATATGTGGTTTGTATGATAATAATTATGGTACGATGTGCTCAAGGATATGTTTGAGATAGGGTACGAGAAGGATGCACAAAACGAAATGTAACGATAGGAGTAAGATACGTTCATGAAACATTAGAGTTAGGTTACATACCGGAGTGCTATGGATAGGAGAGATTGATGAAAGAATACGGTTAGGTTATGGGTAGAAAGGGATAGGTTTGTGATAGATTGATAGAACGATAGCGTTAGGGTACATTCTTGTGACGATATGACTAAGGTACGTCACGTAATGATATGTCTGTGATAGGTATAAGAACGTTAAGGCTATGGTAAGTTAGAGAACGATATGACTATGAAGTGTTTACGTTATGACTTGGTTATGATATGATACATTGTATGCTAGATTATTGTGCTTAAGTACGAAATCAAGTGAACGTGAATGTATGTTATTTATGCTGCTTAGTTGATGTGATATGAATGTATGTGACGATGTGTGGCCCTTGTACGATTATGGCTTGTTGTATGAGTATTGGAATGTAACTGAATGAATTGTATGACATGAAATACGGTAAATTGCATGATACATAACCCCGCTAGGAATATGAATGATATGTAACGAAATGAGAATGGCATGTAAGCATGAAAATGCGACACGGGGTTATGTTCATTAAATGATGACTGTAGGACTAGTGGGACCTCATGCATATTGTGTGATCATGCATTTGGGGGGATACCCCTATCCCATCACGAGGGTACGGACGCGTACATCCAAATGGCAGGACAATGACCGTTATGCCCTGCATAGCGCTGCCATGACGGTTTTAGTTTTAACGGGTCCCGGTGGGCCCCTAGAGCATGCCCACCGGCTAGGGACAGTGACCCAGCGGTGTGCGAACTAGCTGGTGAGCCCATACTCGCACGTATGGGCTACGTTAGAGTATATGGTACACGTCCACGATTACCTGTTAGGATTACACCGTAGGGGAAACGAAACGAAACGAAATGAAACGAAACGAAAGATAGGTCCCATCATTTCATTGCATGTGATTGTTGCATTTAACCCCAATAGTGGGGTCACTTACTGAGTATTTCTTTAAATACTCAAGCCATGTGCTACTACATTTTTCAGGTTAAGGCAAGGCATTCCTGTACGGCTAACGACGACATCGCAACTCGAGATCATGGCACATGCATAGGATAGTGGCATTTATTTTCTTAGACTTAGGATAGAATAGGATGTTTTAAACTTAAACGTTTATTTATTTTATTTCGAGTCTTTTGTTGTGTCATTTTAAAGATGTTTTCGAAACACGTAAGTCCATGGCTGTGTTTTAAGATAAAGGTTATGTTTTATGGAATTTAAATGAAGTCTTCCGCATTCAATATTTATGGTATGTATACAGTAGCGACCTTAAATTAAGTAGAAAATTTCGGGTCGTTACACATTAATTTTGTGTGGTTGGAGTTTATAATCAATAATGTGATAAAGTTCTCTTGTAAACTTACAAAAACATTAAAATGA

mRNA sequence

ATGTTGAAGTCTCTCAAAGATTTGAATCTCTCTTATTGCAATAAACTTGAGGAACTTCTAGACTTGTCCGCACTATCAAACCTTGAAATATTGGATCTCAATTACTGCACAAATTTAAGAATAATTTACTCGCTTGGATCTTTAGATAAGCTTGTTTTCTTATTCTTTCATCATTGTTCGAACCTTAAAAAGCTTCCAAACTACCTCATGTTGAAGTCTCTTGAATATTTGGATCTCTCTTATTGCAATAAACTTGAGGAAAGAGGGAGGGAGATTGAGGAAAGATTTGTTAAACAGTATTTAGTAATAAAAGGAAATATCGCCCCTCTAAATTTTGTCTAACAGAAAACATCAAAATTTTTATCAGCGGGCAGGGAGCTTCTTTAAATTTTGTCTAATAGAAAAGATCAAAATTTTAAGATGGCCAATGAAAATTAGGGAAATAATTTTATAGAGTTCATACTTGAAACTGATGTCATGAGCTCATATAGGTTGACTCGGATTTCAAAGGACGGAATCGAACTTTCATTAAAGATATATTTGTGACAATGACTTAAGCGAGCCAGGTAAGTGACCTTACTATCGACATGGTTATATTTGATGTTGACACGTGCCCTGTGGTTCTGTACGTGTCATATATATTGATATGTGTGAATTGTTTGTAAATCGATATGCTTCCTATATGTTATGTTATGTTATAATATGTGGTTTGTATGATAATAATTATGGTACGATGTGCTCAAGGATATGTTTGAGATAGGGTACGAGAAGGATGCACAAAACGAAATGTAACGATAGGAGTAAGATACGTTCATGAAACATTAGAGTTAGGTTACATACCGGAGTGCTATGGATAGGAGAGATTGATGAAAGAATACGGTTAGGTTATGGGTAGAAAGGGATAGGTTTGTGATAGATTGATAGAACGATAGCGTTAGGGTACATTCTTGTGACGATATGACTAAGGTACGTCACGTAATGATATGTCTGTGATAGGTATAAGAACGTTAAGGCTATGGTAAGTTAGAGAACGATATGACTATGAAGTGTTTACGTTATGACTTGGTTATGATATGATACATTGTATGCTAGATTATTGTGCTTAAGTACGAAATCAAGTGAACGTGAATGTATGTTATTTATGCTGCTTAGTTGATGTGATATGAATGTATGTGACGATGTGTGGCCCTTGTACGATTATGGCTTGTTGTATGAGTATTGGAATGTAACTGAATGAATTGTATGACATGAAATACGGTAAATTGCATGATACATAACCCCGCTAGGAATATGAATGATATGTAACGAAATGAGAATGGCATGTAAGCATGAAAATGCGACACGGGGTTATGTTCATTAAATGATGACTGTAGGACTAGTGGGACCTCATGCATATTGTGTGATCATGCATTTGGGGGGATACCCCTATCCCATCACGAGGGTACGGACGCGTACATCCAAATGGCAGGACAATGACCGTTATGCCCTGCATAGCGCTGCCATGACGGTTTTAGTTTTAACGGGTCCCGGTGGGCCCCTAGAGCATGCCCACCGGCTAGGGACAGTGACCCAGCGGTGTGCGAACTAGCTGGTGAGCCCATACTCGCACGTATGGGCTACGTTAGAGTATATGGTACACGTCCACGATTACCTGTTAGGATTACACCGTAGGGGAAACGAAACGAAACGAAATGAAACGAAACGAAAGATAGGTCCCATCATTTCATTGCATGTGATTGTTGCATTTAACCCCAATAGTGGGGTCACTTACTGAGTATTTCTTTAAATACTCAAGCCATGTGCTACTACATTTTTCAGGTTAAGGCAAGGCATTCCTGTACGGCTAACGACGACATCGCAACTCGAGATCATGGCACATGCATAGGATAGTGGCATTTATTTTCTTAGACTTAGGATAGAATAGGATGTTTTAAACTTAAACGTTTATTTATTTTATTTCGAGTCTTTTGTTGTGTCATTTTAAAGATGTTTTCGAAACACGTAAGTCCATGGCTGTGTTTTAAGATAAAGGTTATGTTTTATGGAATTTAAATGAAGTCTTCCGCATTCAATATTTATGGTATGTATACAGTAGCGACCTTAAATTAAGTAGAAAATTTCGGGTCGTTACACATTAATTTTGTGTGGTTGGAGTTTATAATCAATAATGTGATAAAGTTCTCTTGTAAACTTACAAAAACATTAAAATGA

Coding sequence (CDS)

ATGTTGAAGTCTCTCAAAGATTTGAATCTCTCTTATTGCAATAAACTTGAGGAACTTCTAGACTTGTCCGCACTATCAAACCTTGAAATATTGGATCTCAATTACTGCACAAATTTAAGAATAATTTACTCGCTTGGATCTTTAGATAAGCTTGTTTTCTTATTCTTTCATCATTGTTCGAACCTTAAAAAGCTTCCAAACTACCTCATGTTGAAGTCTCTTGAATATTTGGATCTCTCTTATTGCAATAAACTTGAGGAAAGAGGGAGGGAGATTGAGGAAAGATTTGTTAAACAGTATTTAGTAATAAAAGGAAATATCGCCCCTCTAAATTTTGTCTAA

Homology

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BLAST of CmoCh05G011820 vs. Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-08
Identity = 37/85 (43.53%), Postives = 56/85 (65.88%), Query Frame = 1


Query: 2    LKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNL-RIIYSLGSLDKLVFLFFHHCS 61
            L+ LK + LSY ++L ++  LS+ +NLE +DL  C +L  +  S+  L KLVFL    CS
Sbjct: 1257 LEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCS 1316

Query: 62   NLKKLPNYLMLKSLEYLDLSYCNKL 86
             L+ +P+ + L+SLE L+LS C+KL
Sbjct: 1317 KLENIPSMVDLESLEVLNLSGCSKL 1341

[Close]

BLAST of CmoCh05G011820 vs. Swiss-Prot
Match: SNC1_ARATH (Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=4)

HSP 1 Score: 59.3 bits (142), Expect = 3.1e-08
Identity = 38/85 (44.71%), Postives = 52/85 (61.18%), Query Frame = 1


Query: 2   LKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNL-RIIYSLGSLDKLVFLFFHHCS 61
           L SLK++NL Y N L+E+ DLS   NLE LDL  C +L  +  S+ +  KL++L    C 
Sbjct: 621 LGSLKEMNLRYSNNLKEIPDLSLAINLEELDLVGCKSLVTLPSSIQNATKLIYLDMSDCK 680

Query: 62  NLKKLPNYLMLKSLEYLDLSYCNKL 86
            L+  P  L L+SLEYL+L+ C  L
Sbjct: 681 KLESFPTDLNLESLEYLNLTGCPNL 705

[Close]

BLAST of CmoCh05G011820 vs. Swiss-Prot
Match: RPP5_ARATH (Disease resistance protein RPP5 OS=Arabidopsis thaliana GN=RPP5 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.9e-07
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 1


Query: 2   LKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNLRIIYS-LGSLDKLVFLFFHHCS 61
           L SL++++LS    L E+ DLS  +NL+ L LN C +L  + S +G+L KLV L    C+
Sbjct: 915 LGSLEEMDLSESENLTEIPDLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECT 974

Query: 62  NLKKLPNYLMLKSLEYLDLSYCNKL 86
            L+ LP  + L SLE LDLS C+ L
Sbjct: 975 GLEVLPTDVNLSSLETLDLSGCSSL 999

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BLAST of CmoCh05G011820 vs. Swiss-Prot
Match: LAZ5_ARATH (Disease resistance protein LAZ5 OS=Arabidopsis thaliana GN=LAZ5 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.8e-06
Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 1


Query: 5   LKDLNLSYCNKLEELLDLSALSNLEILDLNYCTN-LRIIYSLGSLDKLVFLFFHHCSNLK 64
           LK  NLSY +KL  LL LS   NLE L+L  CT+ L++   + ++  LVFL    C++L 
Sbjct: 703 LKWANLSYSSKLTNLLGLSNAKNLERLNLEGCTSLLKLPQEMENMKSLVFLNMRRCTSLT 762

Query: 65  KLPNYLMLKSLEYLDLSYCNKLEERGREIEERFVKQYL---VIKG 106
            L + + + SL+ L LS C+KLEE    I E   + YL    IKG
Sbjct: 763 CLQS-IKVSSLKILILSDCSKLEE-FEVISENLEELYLDGTAIKG 805

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BLAST of CmoCh05G011820 vs. Swiss-Prot
Match: VICTR_ARATH (Protein VARIATION IN COMPOUND TRIGGERED ROOT growth response OS=Arabidopsis thaliana GN=VICTR PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 8.5e-06
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 1


Query: 5   LKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNL-RIIYSLGSLDKLVFLFFHHCSNLK 64
           LK+L++     L+E+ DLS  +N+E LD  +C +L  +  S+ +L+KL+ L   +C  L+
Sbjct: 632 LKELDMWASKYLKEIPDLSKATNIEKLDFGHCWSLVELPSSIRNLNKLLELNMEYCGELE 691

Query: 65  KLPNYLMLKSLEYLDLSYCNKL 86
            LP    LKSL+YL+ + C KL
Sbjct: 692 TLPTGFNLKSLDYLNFNECWKL 713

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BLAST of CmoCh05G011820 vs. TrEMBL
Match: A0A0A0LLK3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020890 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 8.0e-19
Identity = 58/88 (65.91%), Postives = 68/88 (77.27%), Query Frame = 1


Query: 1   MLKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNLRIIY-SLGSLDKLVFLFFHHC 60
           MLKSLK L L+YC KLE+L D S  SNLE L L  CTNLR+I+ S+GSL KLV L    C
Sbjct: 696 MLKSLKVLKLAYCKKLEKLPDFSTASNLEKLYLKECTNLRMIHDSIGSLSKLVTLDLGKC 755

Query: 61  SNLKKLPNYLMLKSLEYLDLSYCNKLEE 88
           SNL+KLP+YL LKSLEYL+L++C KLEE
Sbjct: 756 SNLEKLPSYLTLKSLEYLNLAHCKKLEE 783

[Close]

BLAST of CmoCh05G011820 vs. TrEMBL
Match: A6YTE0_CUCME (TIR-NBS-LRR disease resistance protein OS=Cucumis melo subsp. melo PE=4 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 7.5e-17
Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 1   MLKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNLRIIY-SLGSLDKLVFLFFHHC 60
           ML SLK+L LSYC KLE++ DLSA SNLE L L  CTNLR+I+ S+GSLDKL  L    C
Sbjct: 648 MLSSLKELRLSYCKKLEKIPDLSAASNLERLYLQECTNLRLIHESVGSLDKLDHLDLRQC 707

Query: 61  SNLKKLPNYLMLKSLEYLDLSYCNKLE 87
           +NL KLP++L LKSL+ L+LS C KLE
Sbjct: 708 TNLSKLPSHLRLKSLQNLELSRCCKLE 734

[Close]

BLAST of CmoCh05G011820 vs. TrEMBL
Match: A0A0A0LIP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022780 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-16
Identity = 55/87 (63.22%), Postives = 63/87 (72.41%), Query Frame = 1


Query: 1   MLKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNLRIIY-SLGSLDKLVFLFFHHC 60
           M  SLK LNLSYC KLE++ DLS+ SNL  L L  CTNLR+I+ S+GSLDKL  L    C
Sbjct: 83  MFSSLKILNLSYCKKLEKIPDLSSASNLTSLHLYECTNLRVIHESVGSLDKLDHLNLRQC 142

Query: 61  SNLKKLPNYLMLKSLEYLDLSYCNKLE 87
           +NL KLP+YL LKSL YL LS C KLE
Sbjct: 143 TNLVKLPSYLRLKSLRYLSLSGCCKLE 169

[Close]

BLAST of CmoCh05G011820 vs. TrEMBL
Match: D9I8I4_CUCSA (TIR-NBS-LRR-AAA+ATPase class resistance protein OS=Cucumis sativus PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.8e-16
Identity = 54/87 (62.07%), Postives = 64/87 (73.56%), Query Frame = 1


Query: 1   MLKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNLRIIY-SLGSLDKLVFLFFHHC 60
           ML SLK LNLSYC KLE++ DLS+ SNL  L +  CTNLR+I+ S+GSLDKL  L+   C
Sbjct: 677 MLSSLKKLNLSYCKKLEKIPDLSSASNLTSLHIYECTNLRVIHESVGSLDKLEGLYLKQC 736

Query: 61  SNLKKLPNYLMLKSLEYLDLSYCNKLE 87
           +NL KLP+YL LKSL  L LS C KLE
Sbjct: 737 TNLVKLPSYLSLKSLLCLSLSGCCKLE 763

[Close]

BLAST of CmoCh05G011820 vs. TrEMBL
Match: A0A0A0LJM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022270 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.8e-16
Identity = 54/87 (62.07%), Postives = 64/87 (73.56%), Query Frame = 1


Query: 1   MLKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNLRIIY-SLGSLDKLVFLFFHHC 60
           ML SLK LNLSYC KLE++ DLS+ SNL  L +  CTNLR+I+ S+GSLDKL  L+   C
Sbjct: 669 MLSSLKKLNLSYCKKLEKIPDLSSASNLTSLHIYECTNLRVIHESVGSLDKLEGLYLKQC 728

Query: 61  SNLKKLPNYLMLKSLEYLDLSYCNKLE 87
           +NL KLP+YL LKSL  L LS C KLE
Sbjct: 729 TNLVKLPSYLSLKSLLCLSLSGCCKLE 755

[Close]

BLAST of CmoCh05G011820 vs. TAIR10
Match: AT4G12020.2 (AT4G12020.2 protein kinase family protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.3e-09
Identity = 37/85 (43.53%), Postives = 56/85 (65.88%), Query Frame = 1


Query: 2    LKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNL-RIIYSLGSLDKLVFLFFHHCS 61
            L+ LK + LSY ++L ++  LS+ +NLE +DL  C +L  +  S+  L KLVFL    CS
Sbjct: 1257 LEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCS 1316

Query: 62   NLKKLPNYLMLKSLEYLDLSYCNKL 86
             L+ +P+ + L+SLE L+LS C+KL
Sbjct: 1317 KLENIPSMVDLESLEVLNLSGCSKL 1341

[Close]

BLAST of CmoCh05G011820 vs. TAIR10
Match: AT4G16890.1 (AT4G16890.1 disease resistance protein (TIR-NBS-LRR class), putative)

HSP 1 Score: 59.3 bits (142), Expect = 1.8e-09
Identity = 38/85 (44.71%), Postives = 52/85 (61.18%), Query Frame = 1


Query: 2   LKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNL-RIIYSLGSLDKLVFLFFHHCS 61
           L SLK++NL Y N L+E+ DLS   NLE LDL  C +L  +  S+ +  KL++L    C 
Sbjct: 612 LGSLKEMNLRYSNNLKEIPDLSLAINLEELDLVGCKSLVTLPSSIQNATKLIYLDMSDCK 671

Query: 62  NLKKLPNYLMLKSLEYLDLSYCNKL 86
            L+  P  L L+SLEYL+L+ C  L
Sbjct: 672 KLESFPTDLNLESLEYLNLTGCPNL 696

[Close]

BLAST of CmoCh05G011820 vs. TAIR10
Match: AT5G40060.1 (AT5G40060.1 Disease resistance protein (NBS-LRR class) family)

HSP 1 Score: 59.3 bits (142), Expect = 1.8e-09
Identity = 37/85 (43.53%), Postives = 55/85 (64.71%), Query Frame = 1


Query: 2   LKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNL-RIIYSLGSLDKLVFLFFHHCS 61
           L  LKD++L     L+E+ DLS  +NL+ L+L YC++L +I  S+ +L+KL  L    C+
Sbjct: 439 LTCLKDMDLEKSKNLKEIPDLSMATNLKTLNLKYCSSLVKISSSIQNLNKLTKLNMEGCT 498

Query: 62  NLKKLPNYLMLKSLEYLDLSYCNKL 86
           NL+ LP  + LKSL  LDL  C++L
Sbjct: 499 NLETLPAGINLKSLHRLDLRGCSRL 523

[Close]

BLAST of CmoCh05G011820 vs. TAIR10
Match: AT5G41750.1 (AT5G41750.1 Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 57.0 bits (136), Expect = 8.7e-09
Identity = 34/85 (40.00%), Postives = 56/85 (65.88%), Query Frame = 1


Query: 2   LKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNL-RIIYSLGSLDKLVFLFFHHCS 61
           L +LK +++S+   L+E+ +LS  +NLEIL L +C +L  + +S+ +L KL  L   +CS
Sbjct: 625 LPNLKSIDMSFSYSLKEIPNLSKATNLEILSLEFCKSLVELPFSILNLHKLEILNVENCS 684

Query: 62  NLKKLPNYLMLKSLEYLDLSYCNKL 86
            LK +P  + L SLE LD++ C++L
Sbjct: 685 MLKVIPTNINLASLERLDMTGCSEL 709

[Close]

BLAST of CmoCh05G011820 vs. TAIR10
Match: AT4G16940.1 (AT4G16940.1 Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-08
Identity = 44/111 (39.64%), Postives = 61/111 (54.95%), Query Frame = 1


Query: 2   LKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNLRIIYS-LGSLDKLVFLFFHHCS 61
           L  LK ++LS C  + E+ DLS  +NLEILDL+ C +L ++ S +G+L KL  L    C+
Sbjct: 720 LGKLKRVDLSECENMIEIPDLSKATNLEILDLSNCKSLVMLPSTIGNLQKLYTLNMEECT 779

Query: 62  NLKKLPNYLMLKSLEYLDLSYCNKLEERGREIEERFVKQYLVIKGNIAPLN 112
            LK LP  + L SL  + L  C+ L         RF+ Q   I  +IA LN
Sbjct: 780 GLKVLPMDINLSSLHTVHLKGCSSL---------RFIPQ---ISKSIAVLN 818

[Close]

BLAST of CmoCh05G011820 vs. NCBI nr
Match: gi|778666709|ref|XP_011648797.1| (PREDICTED: TMV resistance protein N-like [Cucumis sativus])

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-18
Identity = 58/88 (65.91%), Postives = 68/88 (77.27%), Query Frame = 1


Query: 1   MLKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNLRIIY-SLGSLDKLVFLFFHHC 60
           MLKSLK L L+YC KLE+L D S  SNLE L L  CTNLR+I+ S+GSL KLV L    C
Sbjct: 696 MLKSLKVLKLAYCKKLEKLPDFSTASNLEKLYLKECTNLRMIHDSIGSLSKLVTLDLGKC 755

Query: 61  SNLKKLPNYLMLKSLEYLDLSYCNKLEE 88
           SNL+KLP+YL LKSLEYL+L++C KLEE
Sbjct: 756 SNLEKLPSYLTLKSLEYLNLAHCKKLEE 783

[Close]

BLAST of CmoCh05G011820 vs. NCBI nr
Match: gi|700205747|gb|KGN60866.1| (hypothetical protein Csa_2G020890 [Cucumis sativus])

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-18
Identity = 58/88 (65.91%), Postives = 68/88 (77.27%), Query Frame = 1


Query: 1   MLKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNLRIIY-SLGSLDKLVFLFFHHC 60
           MLKSLK L L+YC KLE+L D S  SNLE L L  CTNLR+I+ S+GSL KLV L    C
Sbjct: 696 MLKSLKVLKLAYCKKLEKLPDFSTASNLEKLYLKECTNLRMIHDSIGSLSKLVTLDLGKC 755

Query: 61  SNLKKLPNYLMLKSLEYLDLSYCNKLEE 88
           SNL+KLP+YL LKSLEYL+L++C KLEE
Sbjct: 756 SNLEKLPSYLTLKSLEYLNLAHCKKLEE 783

[Close]

BLAST of CmoCh05G011820 vs. NCBI nr
Match: gi|659070453|ref|XP_008455171.1| (PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 99.4 bits (246), Expect = 4.4e-18
Identity = 57/88 (64.77%), Postives = 67/88 (76.14%), Query Frame = 1


Query: 1   MLKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNLRIIY-SLGSLDKLVFLFFHHC 60
           MLKSLK L LSYC KLE+L D S  SNLE L L  CTNL++I+ S+G L KLV L    C
Sbjct: 694 MLKSLKVLKLSYCKKLEKLPDFSTASNLEKLYLKECTNLKMIHDSIGCLSKLVTLDLGKC 753

Query: 61  SNLKKLPNYLMLKSLEYLDLSYCNKLEE 88
           SNL+KLP+YL LKSLEYL+L++C KLEE
Sbjct: 754 SNLEKLPSYLTLKSLEYLNLAHCKKLEE 781

[Close]

BLAST of CmoCh05G011820 vs. NCBI nr
Match: gi|311992493|gb|ABR67409.2| (TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo])

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-16
Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 1   MLKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNLRIIY-SLGSLDKLVFLFFHHC 60
           ML SLK+L LSYC KLE++ DLSA SNLE L L  CTNLR+I+ S+GSLDKL  L    C
Sbjct: 648 MLSSLKELRLSYCKKLEKIPDLSAASNLERLYLQECTNLRLIHESVGSLDKLDHLDLRQC 707

Query: 61  SNLKKLPNYLMLKSLEYLDLSYCNKLE 87
           +NL KLP++L LKSL+ L+LS C KLE
Sbjct: 708 TNLSKLPSHLRLKSLQNLELSRCCKLE 734

[Close]

BLAST of CmoCh05G011820 vs. NCBI nr
Match: gi|659071574|ref|XP_008460703.1| (PREDICTED: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-16
Identity = 55/87 (63.22%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 1   MLKSLKDLNLSYCNKLEELLDLSALSNLEILDLNYCTNLRIIY-SLGSLDKLVFLFFHHC 60
           ML SLK+L LSYC KLE++ DLSA SNLE L L  CTNLR+I+ S+GSLDKL  L    C
Sbjct: 707 MLSSLKELRLSYCKKLEKIPDLSAASNLERLYLQECTNLRLIHESVGSLDKLDHLDLRQC 766

Query: 61  SNLKKLPNYLMLKSLEYLDLSYCNKLE 87
           +NL KLP++L LKSL+ L+LS C KLE
Sbjct: 767 TNLSKLPSHLRLKSLQNLELSRCCKLE 793

The following BLAST results are available for this feature:

BLAST of CmoCh05G011820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WRK19_ARATH	2.4e-08	43.53	Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=...	[more]
SNC1_ARATH	3.1e-08	44.71	Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=...	[more]
RPP5_ARATH	5.9e-07	44.71	Disease resistance protein RPP5 OS=Arabidopsis thaliana GN=RPP5 PE=1 SV=1	[more]
LAZ5_ARATH	3.8e-06	41.90	Disease resistance protein LAZ5 OS=Arabidopsis thaliana GN=LAZ5 PE=1 SV=1	[more]
VICTR_ARATH	8.5e-06	39.02	Protein VARIATION IN COMPOUND TRIGGERED ROOT growth response OS=Arabidopsis thal...	[more]

BLAST of CmoCh05G011820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLK3_CUCSA	8.0e-19	65.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020890 PE=4 SV=1	[more]
A6YTE0_CUCME	7.5e-17	63.22	TIR-NBS-LRR disease resistance protein OS=Cucumis melo subsp. melo PE=4 SV=2	[more]
A0A0A0LIP1_CUCSA	1.7e-16	63.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022780 PE=4 SV=1	[more]
D9I8I4_CUCSA	4.8e-16	62.07	TIR-NBS-LRR-AAA+ATPase class resistance protein OS=Cucumis sativus PE=4 SV=1	[more]
A0A0A0LJM0_CUCSA	4.8e-16	62.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022270 PE=4 SV=1	[more]

BLAST of CmoCh05G011820 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G12020.2	1.3e-09	43.53	protein kinase family protein	[more]
AT4G16890.1	1.8e-09	44.71	disease resistance protein (TIR-NBS-LRR class), putative	[more]
AT5G40060.1	1.8e-09	43.53	Disease resistance protein (NBS-LRR class) family	[more]
AT5G41750.1	8.7e-09	40.00	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G16940.1	1.1e-08	39.64	Disease resistance protein (TIR-NBS-LRR class) family	[more]

BLAST of CmoCh05G011820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778666709\|ref\|XP_011648797.1\|	1.1e-18	65.91	PREDICTED: TMV resistance protein N-like [Cucumis sativus]	[more]
gi\|700205747\|gb\|KGN60866.1\|	1.1e-18	65.91	hypothetical protein Csa_2G020890 [Cucumis sativus]	[more]
gi\|659070453\|ref\|XP_008455171.1\|	4.4e-18	64.77	PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo]	[more]
gi\|311992493\|gb\|ABR67409.2\|	1.1e-16	63.22	TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]	[more]
gi\|659071574\|ref\|XP_008460703.1\|	1.1e-16	63.22	PREDICTED: TMV resistance protein N-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001611	Leu-rich_rpt

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0032559	adenyl ribonucleotide binding
molecular_function	GO:0043168	anion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0032550	purine ribonucleoside binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G011820.1	CmoCh05G011820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001611	Leucine-rich repeat	PROFILE	PS51450	LRR	coord: 73..95 score: 5.048coord: 4..26 score: 7.45coord: 50..72 score: 4.716coord: 27..49 score: 5
None	No IPR available	PANTHER	PTHR11017	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	coord: 1..87 score: 4.2
None	No IPR available	PANTHER	PTHR11017:SF155	SUBFAMILY NOT NAMED	coord: 1..87 score: 4.2
None	No IPR available	unknown	SSF52047	RNI-like	coord: 2..91 score: 4.32

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G011820	Cucumber (Chinese Long) v3	cmocucB0924
CmoCh05G011820	Watermelon (97103) v2	cmowmbB785
CmoCh05G011820	Cucurbita moschata (Rifu)	cmocmoB148
CmoCh05G011820	Cucumber (Gy14) v1	cgycmoB0179
CmoCh05G011820	Cucurbita maxima (Rimu)	cmacmoB190
CmoCh05G011820	Cucurbita maxima (Rimu)	cmacmoB787
CmoCh05G011820	Wild cucumber (PI 183967)	cmocpiB787
CmoCh05G011820	Cucumber (Chinese Long) v2	cmocuB782
CmoCh05G011820	Cucumber (Chinese Long) v2	cmocuB783
CmoCh05G011820	Melon (DHL92) v3.5.1	cmomeB724
CmoCh05G011820	Watermelon (Charleston Gray)	cmowcgB700
CmoCh05G011820	Watermelon (97103) v1	cmowmB757
CmoCh05G011820	Cucurbita pepo (Zucchini)	cmocpeB721
CmoCh05G011820	Cucurbita pepo (Zucchini)	cmocpeB742
CmoCh05G011820	Bottle gourd (USVL1VR-Ls)	cmolsiB706
CmoCh05G011820	Cucumber (Gy14) v2	cgybcmoB243
CmoCh05G011820	Melon (DHL92) v3.6.1	cmomedB821
CmoCh05G011820	Silver-seed gourd	carcmoB0974