CmoCh05G010870 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G010870
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionBED zinc finger,hAT family dimerization domain
LocationCmo_Chr05 : 8716731 .. 8718686 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATAACATAGAAGGTAGAATCCTTTCGTGTACTCATGACAATAGCCAAGATGCCATGCATGCTTGTCATGCTTTGAAAGAGCATTTGGATGGTCAGAAAGTTGGGCGTTTCTGTTATATTCCTTGTGTTGCTCGTACTCTAAACTTGATCTTAGATGATGGATTAAGGCCTACAAAGGCAATAATTCCAAAAGTTCGGGAGTTTGTACTGGAAATGAATGCCTGCTTGGATATCTCAGAGGATTTTGTTCGATTTTCTACAGTTTATCAAGAAGCTAACTGGAAATTTCCACTTGATTGTTCTGTAAGATGGAGTGGAAATTATCAGATGCTCGATATAGTACGCAAGGTAATTTCTCTTGTATCTTAATTTTTTCATCCTGCTGAAATAATTTCCGTGATTTGTCTTTCATACTCGTGAAATATCTTTCCACGTTGGTTGGAGAGGGGAACGAAACATTTCTTGTAAGGGTGTGGAAACCTCTCTCTAGTAGATGCCTTTTGAAAACTTTCGGGGAAAGTCCAAAGAGGACAATATATGCTAGTGGTGAGGTTGGACTGTTACAAATGGTATAAGAGCCAGACATTGGGTTGTGGCCAGCGAGGACACTAGGCCTCCAAGGGGGTGGATTGTGATCTCACAGAGGTTGGAGAGTGGAACGAAACATTTTTTATAAGAGTGTGGAAACCTCTTGCTAACAGATGTTTTTTAAAAACCTTGAGGGGAAACCCTAAAGGGAAAGTCCAAAGAGGATAATATTTGCGGGTGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACACTGGGCGGCGTGCCAGCAAAGACGTTGGGCCCCCAAGGAGGGATGGATTGTGAGATCCCACATCGGTTGGGAGGGGAACGAAGCATTCCTTATAAAGATGTGGAAACCTCTCCTTAGCCGACGCGTTTTAAAAACGTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAGTATATGCTAGTGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACATTGGGCGGTGTGCCAGCGAGGACGATAGCCCCCAAGGGGGATGGATTGTGAGATCTCACATCAGTTGGAGAGGGGAACGAATCATTCCTTATAAGGGTATGGAAATCTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATAACCGCTAGTGGTGGGCTTGGACTGTTACAACGTCTAAGAACGGATACCTTGTAATCACGAACCGATATGAACTGCCTAACTATATATCAATATTTTCTTTCTCCTTGTCATGTTTATAATGTTTGGTCAACTAAGTTTACGTGGAGTTCTAATTCATATGCAGGCAGGGAAATCCATGGAAGCTGTTATCAGGAAGTACGAGGAAACACTTAGCAGTAAAATGCTTTTAAACTCTGCCGAGAAGAACATAGTTAATATTGTGCATCAATATTTAGAACCCTTTTACAAAACCACGAACAACATATGCACAAATAAGGTCCCGATCATATTTCCGAGACTATCGCCGCCTGTCGAGATTCTCGACACAACCCGGATTGGCTAAAGACTGCTGCCGAAGACATGGCCAAGAAAGCCAAGAATTATAGCCATCAAGTTTGCAACATTTCCAGATACATGGCCTCAATTCTCGACCCTCGAATCAAAGTCGAGTTGCTTCCAGAAATTCTCAACTCAGGGAATCACTTGGAAGAAGCCAGATCTCATTTCATAAGACACTATTCCTCCAACCACTTCCCATCACTGACCAGTAGCTATAGTGCTCATGAGATCGAGGACGGAGAGAGCGTCTGTTTCGCCGAGGAAATCGCTAGAAAGAAGCGAAGGGCGAGCACGAGCAACGCCACGGATGAGCTAACGCAGTATTTATCAGAGCCTCCAGCTCCAATACCCCAACAGATGTTCTAG

mRNA sequence

ATGTATAACATAGAAGGTAGAATCCTTTCGTGTACTCATGACAATAGCCAAGATGCCATGCATGCTTGTCATGCTTTGAAAGAGCATTTGGATGGTCAGAAAGTTGGGCGTTTCTGTTATATTCCTTGTGTTGCTCGTACTCTAAACTTGATCTTAGATGATGGATTAAGGCCTACAAAGGCAATAATTCCAAAAGTTCGGGAGTTTGTACTGGAAATGAATGCCTGCTTGGATATCTCAGAGGATTTTGTTCGATTTTCTACAGTTTATCAAGAAGCTAACTGGAAATTTCCACTTGATTGTTCTGTAAGATGGAGTGGAAATTATCAGATGCTCGATATAGTACGCAAGGCAGGGAAATCCATGGAAGCTGTTATCAGGAAGTACGAGGAAACACTTAGCAGTCCCGATCATATTTCCGAGACTATCGCCGCCTGTCGAGATTCTCGACACAACCCGGATTGGCTAAAGACTGCTGCCGAAGACATGGCCAAGAAAGCCAAGAATTATAGCCATCAAGTTTGCAACATTTCCAGATACATGGCCTCAATTCTCGACCCTCGAATCAAAGTCGAGTTGCTTCCAGAAATTCTCAACTCAGGGAATCACTTGGAAGAAGCCAGATCTCATTTCATAAGACACTATTCCTCCAACCACTTCCCATCACTGACCAGTAGCTATAGTGCTCATGAGATCGAGGACGGAGAGAGCGTCTGTTTCGCCGAGGAAATCGCTAGAAAGAAGCGAAGGGCGAGCACGAGCAACGCCACGGATGAGCTAACGCAGTATTTATCAGAGCCTCCAGCTCCAATACCCCAACAGATGTTCTAG

Coding sequence (CDS)

ATGTATAACATAGAAGGTAGAATCCTTTCGTGTACTCATGACAATAGCCAAGATGCCATGCATGCTTGTCATGCTTTGAAAGAGCATTTGGATGGTCAGAAAGTTGGGCGTTTCTGTTATATTCCTTGTGTTGCTCGTACTCTAAACTTGATCTTAGATGATGGATTAAGGCCTACAAAGGCAATAATTCCAAAAGTTCGGGAGTTTGTACTGGAAATGAATGCCTGCTTGGATATCTCAGAGGATTTTGTTCGATTTTCTACAGTTTATCAAGAAGCTAACTGGAAATTTCCACTTGATTGTTCTGTAAGATGGAGTGGAAATTATCAGATGCTCGATATAGTACGCAAGGCAGGGAAATCCATGGAAGCTGTTATCAGGAAGTACGAGGAAACACTTAGCAGTCCCGATCATATTTCCGAGACTATCGCCGCCTGTCGAGATTCTCGACACAACCCGGATTGGCTAAAGACTGCTGCCGAAGACATGGCCAAGAAAGCCAAGAATTATAGCCATCAAGTTTGCAACATTTCCAGATACATGGCCTCAATTCTCGACCCTCGAATCAAAGTCGAGTTGCTTCCAGAAATTCTCAACTCAGGGAATCACTTGGAAGAAGCCAGATCTCATTTCATAAGACACTATTCCTCCAACCACTTCCCATCACTGACCAGTAGCTATAGTGCTCATGAGATCGAGGACGGAGAGAGCGTCTGTTTCGCCGAGGAAATCGCTAGAAAGAAGCGAAGGGCGAGCACGAGCAACGCCACGGATGAGCTAACGCAGTATTTATCAGAGCCTCCAGCTCCAATACCCCAACAGATGTTCTAG
Homology
[Close]
BLAST of CmoCh05G010870 vs. TrEMBL
Match: A0A0A0LGZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034510 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 1.4e-130
Identity = 240/315 (76.19%), Postives = 253/315 (80.32%), Query Frame = 1 

Query: 1   MYNIEGRILSCTHDNSQDAMHACHALKEHLDGQKVGRFCYIPCVARTLNLILDDGLRPTK 60
           MYNIE RILSCTHDNSQDA+HACHALKEHLDGQKVG FCYIPC ARTLNLI+DDGLRPTK
Sbjct: 278 MYNIESRILSCTHDNSQDAVHACHALKEHLDGQKVGPFCYIPCAARTLNLIIDDGLRPTK 337

Query: 61  AIIPKVREFVLEMNACLDISEDFVRFSTVYQEANWKFPLDCSVRWSGNYQMLDIVRKAGK 120
           +II KVREFVLE+NACLDISEDFV+F+TVYQE NWKFPLD SVRWSGNYQMLDIVRK+GK
Sbjct: 338 SIIAKVREFVLELNACLDISEDFVQFTTVYQEGNWKFPLDASVRWSGNYQMLDIVRKSGK 397

Query: 121 SMEAVIRKYEETLSSP-------------------------------------------D 180
           SMEAVIRKYEETL S                                            D
Sbjct: 398 SMEAVIRKYEETLGSKMLLNSAEKNVVNIVHQYLEPFYKTTNNICTNKVATVGLVLFFMD 457

Query: 181 HISETIAACRDSRHNPDWLKTAAEDMAKKAKNYSHQVCNISRYMASILDPRIKVELLPEI 240
           HISETIAACRDSRHNPDWLK+AAEDMAKKAKNYS QVCNI  YM +ILDPRIK EL+PE 
Sbjct: 458 HISETIAACRDSRHNPDWLKSAAEDMAKKAKNYSSQVCNIFTYMTAILDPRIKGELIPES 517

Query: 241 LNSGNHLEEARSHFIRHYSSNHFPSLTSSYSAHEIEDGESVCFAEEIARKKRRASTSNAT 273
           LNSGNHLEEARSHF+R+YSSNHFPS+TS YSA EIEDG SV FAEEIARKKRRAS SNAT
Sbjct: 518 LNSGNHLEEARSHFMRYYSSNHFPSVTSGYSAQEIEDGGSVSFAEEIARKKRRASMSNAT 577

[Close]
BLAST of CmoCh05G010870 vs. TrEMBL
Match: A0A067JKR1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05843 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.3e-107
Identity = 195/315 (61.90%), Postives = 232/315 (73.65%), Query Frame = 1 

Query: 1   MYNIEGRILSCTHDNSQDAMHACHALKEHLDGQKVGRFCYIPCVARTLNLILDDGLRPTK 60
           MYN+E RILSCTHDNSQ+A+HACH LKE LDGQK G FCYIPC AR LNLI+DDGLR TK
Sbjct: 246 MYNLENRILSCTHDNSQNAIHACHTLKEDLDGQKAGPFCYIPCAARALNLIIDDGLRTTK 305

Query: 61  AIIPKVREFVLEMNACLDISEDFVRFSTVYQEANWKFPLDCSVRWSGNYQMLDIVRKAGK 120
            +I K+REFVLE+N+  ++++DF + +T +QE +WKFPL+ S RWSGNYQMLD+VRKAGK
Sbjct: 306 PVISKIREFVLELNSSTEMADDFTQLATAFQEGSWKFPLETSARWSGNYQMLDLVRKAGK 365

Query: 121 SMEAVIRKYEETLSSP-------------------------------------------D 180
           +M+ VIRKYEETL S                                            D
Sbjct: 366 AMDGVIRKYEETLGSRMLLSSTEKNAVSIVHGYLEPFYKTTNNICTSKLLTIGLVLFFMD 425

Query: 181 HISETIAACRDSRHNPDWLKTAAEDMAKKAKNYSHQVCNISRYMASILDPRIKVELLPEI 240
           HISE I  CR+ RH+PDWLK AAE+MAKKA++Y+ QVCNI  +M +ILDPRIK EL+PE 
Sbjct: 426 HISEMITICRECRHSPDWLKNAAEEMAKKARSYNSQVCNIFTFMTAILDPRIKSELIPES 485

Query: 241 LNSGNHLEEARSHFIRHYSSNHFPSLTSSYSAHEIEDGESVCFAEEIARKKRRASTSNAT 273
           L++GN+LEEAR+HFIR+YSS+HFPS+ S Y A E EDG SV FAEEIARKKRRA+ SNAT
Sbjct: 486 LSTGNYLEEARNHFIRNYSSSHFPSMASGYGAQETEDGGSVSFAEEIARKKRRATLSNAT 545

[Close]
BLAST of CmoCh05G010870 vs. TrEMBL
Match: V4TL96_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019100mg PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 3.8e-107
Identity = 196/314 (62.42%), Postives = 227/314 (72.29%), Query Frame = 1 

Query: 2   YNIEGRILSCTHDNSQDAMHACHALKEHLDGQKVGRFCYIPCVARTLNLILDDGLRPTKA 61
           YNIE ++LSCTHDNSQ+A+HACH LKE  DGQKVG FCYIPC ARTL+LI+DDGLR TK 
Sbjct: 282 YNIENKVLSCTHDNSQNAIHACHTLKEKFDGQKVGPFCYIPCAARTLSLIIDDGLRTTKP 341

Query: 62  IIPKVREFVLEMNACLDISEDFVRFSTVYQEANWKFPLDCSVRWSGNYQMLDIVRKAGKS 121
           +I +VREF L++N C D SEDF++FS  Y+E +WKFPLD S RWSG+YQMLDIV KAGK+
Sbjct: 342 VISRVREFALQLNECTDFSEDFIQFSMAYREGSWKFPLDTSARWSGSYQMLDIVHKAGKT 401

Query: 122 MEAVIRKYEETLSSP-------------------------------------------DH 181
           MEAV+RK  E L                                              DH
Sbjct: 402 MEAVVRKNGEKLGDRMILTAAEKTAVSIVHGYLEPFYKTTNNMCTTKMPTIGLILFFMDH 461

Query: 182 ISETIAACRDSRHNPDWLKTAAEDMAKKAKNYSHQVCNISRYMASILDPRIKVELLPEIL 241
           ISE I  CR+SRH P+WLK+AAEDMAKKA++YS QVCNI  YM +ILDPRIK EL+PE L
Sbjct: 462 ISEMITVCRESRHTPEWLKSAAEDMAKKARSYSSQVCNIFTYMTAILDPRIKCELIPENL 521

Query: 242 NSGNHLEEARSHFIRHYSSNHFPSLTSSYSAHEIEDGESVCFAEEIARKKRRASTSNATD 273
           NS NHLEEAR+HF+R+YS+ HFPS+TS Y AHEIEDG SV FAEEIARKKRR S  +ATD
Sbjct: 522 NSENHLEEARAHFMRNYSTGHFPSVTSGYGAHEIEDGGSVSFAEEIARKKRRGSIVSATD 581

[Close]
BLAST of CmoCh05G010870 vs. TrEMBL
Match: A0A151SLJ1_CAJCA (Putative AC transposase OS=Cajanus cajan GN=KK1_001865 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 5.5e-106
Identity = 198/314 (63.06%), Postives = 228/314 (72.61%), Query Frame = 1 

Query: 2   YNIEGRILSCTHDNSQDAMHACHALKEHLDGQKVGRFCYIPCVARTLNLILDDGLRPTKA 61
           YNIE RILSCTHD S  AMHACH LKE LDGQK+G FCYIPC ARTLN+I+DDGLR  K 
Sbjct: 264 YNIENRILSCTHDISTSAMHACHTLKEDLDGQKIGPFCYIPCAARTLNMIIDDGLRSAKQ 323

Query: 62  IIPKVREFVLEMNACLDISEDFVRFSTVYQEANWKFPLDCSVRWSGNYQMLDIVRKAGKS 121
           +I K+REFV+E+NA   ISEDF++ ST YQE  WKFPLD S RWSGNYQMLD+VRKAGKS
Sbjct: 324 LISKIREFVIELNASPMISEDFIQLSTAYQEGTWKFPLDVSARWSGNYQMLDLVRKAGKS 383

Query: 122 MEAVIRKYEETLSS-------------------------------------------PDH 181
           ++AVIRKYEE L S                                            DH
Sbjct: 384 VDAVIRKYEEMLGSRMLLGSSDKSVVNIMHQYLEPFYKTTNNICTSKLPTVGLVLFFMDH 443

Query: 182 ISETIAACRDSRHNPDWLKTAAEDMAKKAKNYSHQVCNISRYMASILDPRIKVELLPEIL 241
           ISETI +CR+SRH+PDWLK AAE+MAKKA+NY +QVCNI  YM +ILDPRIK EL+P+ L
Sbjct: 444 ISETITSCRESRHSPDWLKNAAEEMAKKARNYINQVCNIFTYMTAILDPRIKGELIPDSL 503

Query: 242 NSGNHLEEARSHFIRHYSSNHFPSLTSSYSAHEIEDGESVCFAEEIARKKRRASTSNATD 273
           NS N L+EAR+HFIR+YS++HF S++S Y+  EIEDG SV FAEEIARKKRR S S+ATD
Sbjct: 504 NSENFLDEARTHFIRNYSTSHFSSMSSGYNGQEIEDGGSVSFAEEIARKKRRTSMSSATD 563

[Close]
BLAST of CmoCh05G010870 vs. TrEMBL
Match: W9S674_9ROSA (Putative AC transposase OS=Morus notabilis GN=L484_022285 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 5.5e-106
Identity = 199/315 (63.17%), Postives = 231/315 (73.33%), Query Frame = 1 

Query: 1   MYNIEGRILSCTHDNSQDAMHACHALKEHLDGQKVGRFCYIPCVARTLNLILDDGLRPTK 60
           MYNIE R+LSCTHDNSQ A+HACH+LKE LD QK+G FCYIPC AR+LNLI++DGLR  K
Sbjct: 469 MYNIENRVLSCTHDNSQSAIHACHSLKEDLDTQKLGSFCYIPCAARSLNLIIEDGLRTMK 528

Query: 61  AIIPKVREFVLEMNACLDISEDFVRFSTVYQEANWKFPLDCSVRWSGNYQMLDIVRKAGK 120
            II K+REFVL +NA  +ISEDF++ +   QE +WKFPLD S RWSGNYQMLDIV+KA K
Sbjct: 529 PIISKIREFVLGLNASPEISEDFIQLAAACQEGSWKFPLDASARWSGNYQMLDIVKKASK 588

Query: 121 SMEAVIRKYEETLSSP-------------------------------------------D 180
           SM+AVIRKYEETL S                                            D
Sbjct: 589 SMDAVIRKYEETLGSRMLLSSAEKNAISVVHEYLEPFYKTTNNICTNKVPTIGLVLFFMD 648

Query: 181 HISETIAACRDSRHNPDWLKTAAEDMAKKAKNYSHQVCNISRYMASILDPRIKVELLPEI 240
           HISE IAACR++RH PDWLK AAEDMAKKA++Y++QVCNI  YM +ILDPRIK EL+PE 
Sbjct: 649 HISEMIAACREARHYPDWLKNAAEDMAKKARSYNNQVCNIFTYMTAILDPRIKGELIPEN 708

Query: 241 LNSGNHLEEARSHFIRHYSSNHFPSLTSSYSAHEIEDGESVCFAEEIARKKRRASTSNAT 273
           L++ N LEEARSHFIR+YS++HFPS+TS Y   +IEDG SV FAEEIARKKRRAS S+AT
Sbjct: 709 LSNENFLEEARSHFIRNYSTSHFPSMTSGYGTQDIEDGGSVSFAEEIARKKRRASMSSAT 768

[Close]
BLAST of CmoCh05G010870 vs. TAIR10
Match: AT1G18560.1 (AT1G18560.1 BED zinc finger ;hAT family dimerisation domain)

HSP 1 Score: 184.9 bits (468), Expect = 6.8e-47
Identity = 82/134 (61.19%), Postives = 106/134 (79.10%), Query Frame = 1 

Query: 2   YNIEGRILSCTHDNSQDAMHACHALKEHLDGQKVGRFCYIPCVARTLNLILDDGLRPTKA 61
           Y IE RIL CTHDNS++A+HACH+LKE+ DGQKV  FCYIPC A+TLN I+D+GL   K 
Sbjct: 264 YAIEDRILCCTHDNSENAIHACHSLKEYFDGQKVLPFCYIPCAAQTLNDIIDEGLATIKP 323

Query: 62  IIPKVREFVLEMNACLDISEDFVRFSTVYQEANWKFPLDCSVRWSGNYQMLDIVRKAGKS 121
           II KVREF  E+NA  ++S+DF++ +T YQE NWK P+D S RWSGNYQM++I+ KA KS
Sbjct: 324 IISKVREFTQELNASTELSDDFIQLTTAYQEGNWKLPIDASSRWSGNYQMVNILCKASKS 383

Query: 122 MEAVIRKYEETLSS 136
           +++VIRK E+ L +
Sbjct: 384 LDSVIRKNEDALEN 397

[Close]
BLAST of CmoCh05G010870 vs. NCBI nr
Match: gi|659070124|ref|XP_008453529.1| (PREDICTED: putative AC transposase isoform X2 [Cucumis melo])

HSP 1 Score: 474.9 bits (1221), Expect = 9.3e-131
Identity = 240/315 (76.19%), Postives = 254/315 (80.63%), Query Frame = 1 

Query: 1   MYNIEGRILSCTHDNSQDAMHACHALKEHLDGQKVGRFCYIPCVARTLNLILDDGLRPTK 60
           MYNIE RILSCTHDNSQDA+HACHALKEHLDGQKVG FCYIPC ARTLNLI+DDGLRPTK
Sbjct: 277 MYNIESRILSCTHDNSQDAVHACHALKEHLDGQKVGPFCYIPCAARTLNLIIDDGLRPTK 336

Query: 61  AIIPKVREFVLEMNACLDISEDFVRFSTVYQEANWKFPLDCSVRWSGNYQMLDIVRKAGK 120
           +II KVREFVLE+NACLDISEDFV+F+TVYQE NWKFPLD SVRWSGNYQMLDIVRKAGK
Sbjct: 337 SIIAKVREFVLELNACLDISEDFVQFTTVYQEGNWKFPLDASVRWSGNYQMLDIVRKAGK 396

Query: 121 SMEAVIRKYEETLSSP-------------------------------------------D 180
           SMEAVIRKYEETL S                                            D
Sbjct: 397 SMEAVIRKYEETLGSKMLLNSAEKNVVNIVHQYLEPFYKTTNNICTNKVATVGLVLFFMD 456

Query: 181 HISETIAACRDSRHNPDWLKTAAEDMAKKAKNYSHQVCNISRYMASILDPRIKVELLPEI 240
           HISET+AACRDSRHNPDWLK+AAEDMAKKAKNYS+QVCNI  YM +ILDPRIK EL+PE 
Sbjct: 457 HISETVAACRDSRHNPDWLKSAAEDMAKKAKNYSNQVCNIFTYMTAILDPRIKGELIPEN 516

Query: 241 LNSGNHLEEARSHFIRHYSSNHFPSLTSSYSAHEIEDGESVCFAEEIARKKRRASTSNAT 273
           LNSGNHLEEARSHF+R+YSSNHFPS+TS YSA EIEDG SV FAEEIARKKRRAS SNAT
Sbjct: 517 LNSGNHLEEARSHFMRYYSSNHFPSVTSGYSAQEIEDGGSVSFAEEIARKKRRASMSNAT 576

[Close]
BLAST of CmoCh05G010870 vs. NCBI nr
Match: gi|659070128|ref|XP_008453542.1| (PREDICTED: putative AC transposase isoform X3 [Cucumis melo])

HSP 1 Score: 474.9 bits (1221), Expect = 9.3e-131
Identity = 240/315 (76.19%), Postives = 254/315 (80.63%), Query Frame = 1 

Query: 1   MYNIEGRILSCTHDNSQDAMHACHALKEHLDGQKVGRFCYIPCVARTLNLILDDGLRPTK 60
           MYNIE RILSCTHDNSQDA+HACHALKEHLDGQKVG FCYIPC ARTLNLI+DDGLRPTK
Sbjct: 275 MYNIESRILSCTHDNSQDAVHACHALKEHLDGQKVGPFCYIPCAARTLNLIIDDGLRPTK 334

Query: 61  AIIPKVREFVLEMNACLDISEDFVRFSTVYQEANWKFPLDCSVRWSGNYQMLDIVRKAGK 120
           +II KVREFVLE+NACLDISEDFV+F+TVYQE NWKFPLD SVRWSGNYQMLDIVRKAGK
Sbjct: 335 SIIAKVREFVLELNACLDISEDFVQFTTVYQEGNWKFPLDASVRWSGNYQMLDIVRKAGK 394

Query: 121 SMEAVIRKYEETLSSP-------------------------------------------D 180
           SMEAVIRKYEETL S                                            D
Sbjct: 395 SMEAVIRKYEETLGSKMLLNSAEKNVVNIVHQYLEPFYKTTNNICTNKVATVGLVLFFMD 454

Query: 181 HISETIAACRDSRHNPDWLKTAAEDMAKKAKNYSHQVCNISRYMASILDPRIKVELLPEI 240
           HISET+AACRDSRHNPDWLK+AAEDMAKKAKNYS+QVCNI  YM +ILDPRIK EL+PE 
Sbjct: 455 HISETVAACRDSRHNPDWLKSAAEDMAKKAKNYSNQVCNIFTYMTAILDPRIKGELIPEN 514

Query: 241 LNSGNHLEEARSHFIRHYSSNHFPSLTSSYSAHEIEDGESVCFAEEIARKKRRASTSNAT 273
           LNSGNHLEEARSHF+R+YSSNHFPS+TS YSA EIEDG SV FAEEIARKKRRAS SNAT
Sbjct: 515 LNSGNHLEEARSHFMRYYSSNHFPSVTSGYSAQEIEDGGSVSFAEEIARKKRRASMSNAT 574

[Close]
BLAST of CmoCh05G010870 vs. NCBI nr
Match: gi|659070130|ref|XP_008453550.1| (PREDICTED: putative AC transposase isoform X4 [Cucumis melo])

HSP 1 Score: 474.9 bits (1221), Expect = 9.3e-131
Identity = 240/315 (76.19%), Postives = 254/315 (80.63%), Query Frame = 1 

Query: 1   MYNIEGRILSCTHDNSQDAMHACHALKEHLDGQKVGRFCYIPCVARTLNLILDDGLRPTK 60
           MYNIE RILSCTHDNSQDA+HACHALKEHLDGQKVG FCYIPC ARTLNLI+DDGLRPTK
Sbjct: 264 MYNIESRILSCTHDNSQDAVHACHALKEHLDGQKVGPFCYIPCAARTLNLIIDDGLRPTK 323

Query: 61  AIIPKVREFVLEMNACLDISEDFVRFSTVYQEANWKFPLDCSVRWSGNYQMLDIVRKAGK 120
           +II KVREFVLE+NACLDISEDFV+F+TVYQE NWKFPLD SVRWSGNYQMLDIVRKAGK
Sbjct: 324 SIIAKVREFVLELNACLDISEDFVQFTTVYQEGNWKFPLDASVRWSGNYQMLDIVRKAGK 383

Query: 121 SMEAVIRKYEETLSSP-------------------------------------------D 180
           SMEAVIRKYEETL S                                            D
Sbjct: 384 SMEAVIRKYEETLGSKMLLNSAEKNVVNIVHQYLEPFYKTTNNICTNKVATVGLVLFFMD 443

Query: 181 HISETIAACRDSRHNPDWLKTAAEDMAKKAKNYSHQVCNISRYMASILDPRIKVELLPEI 240
           HISET+AACRDSRHNPDWLK+AAEDMAKKAKNYS+QVCNI  YM +ILDPRIK EL+PE 
Sbjct: 444 HISETVAACRDSRHNPDWLKSAAEDMAKKAKNYSNQVCNIFTYMTAILDPRIKGELIPEN 503

Query: 241 LNSGNHLEEARSHFIRHYSSNHFPSLTSSYSAHEIEDGESVCFAEEIARKKRRASTSNAT 273
           LNSGNHLEEARSHF+R+YSSNHFPS+TS YSA EIEDG SV FAEEIARKKRRAS SNAT
Sbjct: 504 LNSGNHLEEARSHFMRYYSSNHFPSVTSGYSAQEIEDGGSVSFAEEIARKKRRASMSNAT 563

[Close]
BLAST of CmoCh05G010870 vs. NCBI nr
Match: gi|659070132|ref|XP_008453558.1| (PREDICTED: putative AC transposase isoform X5 [Cucumis melo])

HSP 1 Score: 474.9 bits (1221), Expect = 9.3e-131
Identity = 240/315 (76.19%), Postives = 254/315 (80.63%), Query Frame = 1 

Query: 1   MYNIEGRILSCTHDNSQDAMHACHALKEHLDGQKVGRFCYIPCVARTLNLILDDGLRPTK 60
           MYNIE RILSCTHDNSQDA+HACHALKEHLDGQKVG FCYIPC ARTLNLI+DDGLRPTK
Sbjct: 262 MYNIESRILSCTHDNSQDAVHACHALKEHLDGQKVGPFCYIPCAARTLNLIIDDGLRPTK 321

Query: 61  AIIPKVREFVLEMNACLDISEDFVRFSTVYQEANWKFPLDCSVRWSGNYQMLDIVRKAGK 120
           +II KVREFVLE+NACLDISEDFV+F+TVYQE NWKFPLD SVRWSGNYQMLDIVRKAGK
Sbjct: 322 SIIAKVREFVLELNACLDISEDFVQFTTVYQEGNWKFPLDASVRWSGNYQMLDIVRKAGK 381

Query: 121 SMEAVIRKYEETLSSP-------------------------------------------D 180
           SMEAVIRKYEETL S                                            D
Sbjct: 382 SMEAVIRKYEETLGSKMLLNSAEKNVVNIVHQYLEPFYKTTNNICTNKVATVGLVLFFMD 441

Query: 181 HISETIAACRDSRHNPDWLKTAAEDMAKKAKNYSHQVCNISRYMASILDPRIKVELLPEI 240
           HISET+AACRDSRHNPDWLK+AAEDMAKKAKNYS+QVCNI  YM +ILDPRIK EL+PE 
Sbjct: 442 HISETVAACRDSRHNPDWLKSAAEDMAKKAKNYSNQVCNIFTYMTAILDPRIKGELIPEN 501

Query: 241 LNSGNHLEEARSHFIRHYSSNHFPSLTSSYSAHEIEDGESVCFAEEIARKKRRASTSNAT 273
           LNSGNHLEEARSHF+R+YSSNHFPS+TS YSA EIEDG SV FAEEIARKKRRAS SNAT
Sbjct: 502 LNSGNHLEEARSHFMRYYSSNHFPSVTSGYSAQEIEDGGSVSFAEEIARKKRRASMSNAT 561

[Close]
BLAST of CmoCh05G010870 vs. NCBI nr
Match: gi|659070134|ref|XP_008453567.1| (PREDICTED: putative AC transposase isoform X6 [Cucumis melo])

HSP 1 Score: 474.9 bits (1221), Expect = 9.3e-131
Identity = 240/315 (76.19%), Postives = 254/315 (80.63%), Query Frame = 1 

Query: 1   MYNIEGRILSCTHDNSQDAMHACHALKEHLDGQKVGRFCYIPCVARTLNLILDDGLRPTK 60
           MYNIE RILSCTHDNSQDA+HACHALKEHLDGQKVG FCYIPC ARTLNLI+DDGLRPTK
Sbjct: 257 MYNIESRILSCTHDNSQDAVHACHALKEHLDGQKVGPFCYIPCAARTLNLIIDDGLRPTK 316

Query: 61  AIIPKVREFVLEMNACLDISEDFVRFSTVYQEANWKFPLDCSVRWSGNYQMLDIVRKAGK 120
           +II KVREFVLE+NACLDISEDFV+F+TVYQE NWKFPLD SVRWSGNYQMLDIVRKAGK
Sbjct: 317 SIIAKVREFVLELNACLDISEDFVQFTTVYQEGNWKFPLDASVRWSGNYQMLDIVRKAGK 376

Query: 121 SMEAVIRKYEETLSSP-------------------------------------------D 180
           SMEAVIRKYEETL S                                            D
Sbjct: 377 SMEAVIRKYEETLGSKMLLNSAEKNVVNIVHQYLEPFYKTTNNICTNKVATVGLVLFFMD 436

Query: 181 HISETIAACRDSRHNPDWLKTAAEDMAKKAKNYSHQVCNISRYMASILDPRIKVELLPEI 240
           HISET+AACRDSRHNPDWLK+AAEDMAKKAKNYS+QVCNI  YM +ILDPRIK EL+PE 
Sbjct: 437 HISETVAACRDSRHNPDWLKSAAEDMAKKAKNYSNQVCNIFTYMTAILDPRIKGELIPEN 496

Query: 241 LNSGNHLEEARSHFIRHYSSNHFPSLTSSYSAHEIEDGESVCFAEEIARKKRRASTSNAT 273
           LNSGNHLEEARSHF+R+YSSNHFPS+TS YSA EIEDG SV FAEEIARKKRRAS SNAT
Sbjct: 497 LNSGNHLEEARSHFMRYYSSNHFPSVTSGYSAQEIEDGGSVSFAEEIARKKRRASMSNAT 556

The following BLAST results are available for this feature:
BLAST of CmoCh05G010870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh05G010870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGZ3_CUCSA1.4e-13076.19Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034510 PE=4 SV=1[more]
A0A067JKR1_JATCU1.3e-10761.90Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05843 PE=4 SV=1[more]
V4TL96_9ROSI3.8e-10762.42Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019100mg PE=4 SV=1[more]
A0A151SLJ1_CAJCA5.5e-10663.06Putative AC transposase OS=Cajanus cajan GN=KK1_001865 PE=4 SV=1[more]
W9S674_9ROSA5.5e-10663.17Putative AC transposase OS=Morus notabilis GN=L484_022285 PE=4 SV=1[more]
BLAST of CmoCh05G010870 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G18560.16.8e-4761.19 BED zinc finger ;hAT family dimerisation domain[more]
BLAST of CmoCh05G010870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659070124|ref|XP_008453529.1|9.3e-13176.19PREDICTED: putative AC transposase isoform X2 [Cucumis melo][more]
gi|659070128|ref|XP_008453542.1|9.3e-13176.19PREDICTED: putative AC transposase isoform X3 [Cucumis melo][more]
gi|659070130|ref|XP_008453550.1|9.3e-13176.19PREDICTED: putative AC transposase isoform X4 [Cucumis melo][more]
gi|659070132|ref|XP_008453558.1|9.3e-13176.19PREDICTED: putative AC transposase isoform X5 [Cucumis melo][more]
gi|659070134|ref|XP_008453567.1|9.3e-13176.19PREDICTED: putative AC transposase isoform X6 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G010870.1CmoCh05G010870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 2..270
score: 1.06
NoneNo IPR availablePANTHERPTHR23272BED FINGER-RELATEDcoord: 1..272
score: 4.7E
NoneNo IPR availablePANTHERPTHR23272:SF21BED ZINC FINGER AND HAT DIMERIZATION DOMAIN-CONTAINING PROTEINcoord: 1..272
score: 4.7E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G010870Wild cucumber (PI 183967)cmocpiB787
CmoCh05G010870Cucumber (Chinese Long) v2cmocuB775
CmoCh05G010870Cucumber (Chinese Long) v2cmocuB784
CmoCh05G010870Melon (DHL92) v3.5.1cmomeB712
CmoCh05G010870Melon (DHL92) v3.5.1cmomeB724
CmoCh05G010870Watermelon (Charleston Gray)cmowcgB700
CmoCh05G010870Watermelon (97103) v1cmowmB757
CmoCh05G010870Cucurbita pepo (Zucchini)cmocpeB721
CmoCh05G010870Cucurbita pepo (Zucchini)cmocpeB742
CmoCh05G010870Bottle gourd (USVL1VR-Ls)cmolsiB702
CmoCh05G010870Bottle gourd (USVL1VR-Ls)cmolsiB706
CmoCh05G010870Bottle gourd (USVL1VR-Ls)cmolsiB723
CmoCh05G010870Cucumber (Gy14) v2cgybcmoB128
CmoCh05G010870Cucumber (Gy14) v2cgybcmoB243
CmoCh05G010870Melon (DHL92) v3.6.1cmomedB808
CmoCh05G010870Melon (DHL92) v3.6.1cmomedB821
CmoCh05G010870Silver-seed gourdcarcmoB0101
CmoCh05G010870Silver-seed gourdcarcmoB0769
CmoCh05G010870Silver-seed gourdcarcmoB1191
CmoCh05G010870Cucumber (Chinese Long) v3cmocucB0914
CmoCh05G010870Cucumber (Chinese Long) v3cmocucB0924
CmoCh05G010870Watermelon (97103) v2cmowmbB785
CmoCh05G010870Watermelon (97103) v2cmowmbB797
CmoCh05G010870Wax gourdcmowgoB0928
CmoCh05G010870Cucurbita moschata (Rifu)cmocmoB148
CmoCh05G010870Cucurbita moschata (Rifu)cmocmoB307
CmoCh05G010870Cucumber (Gy14) v1cgycmoB0179
CmoCh05G010870Cucurbita maxima (Rimu)cmacmoB190
CmoCh05G010870Cucurbita maxima (Rimu)cmacmoB787