CmoCh05G010590 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G010590
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description26S proteasome non-ATPase regulatory subunit-like protein
LocationCmo_Chr05 : 8539728 .. 8543872 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTTCAATTCCATTTTGAAAGCTTTGGATCGGGAAAAATGGTGGCTTCCAATTTGAAGTCGGAGACTATGGATCTGATGCAGAAGAGGAGCGCTATCGAGGCCCAGATGGATGCCATCATTTCGCGCCTTTGTCAGCCTGGAGGTCCTGGACTCTCTGGAAATCTCGTCGACTCTGAGGTGATTGCAATGCCTTCTTTTCCCTCGACTTCCATGAACGAATCAAATTTATTGCAGTTCCTCTAGTTGATTAGGTTTTGTTTCGAAAACTCCGTAGTGGAAATTTTCGGTTCGGCTAGTGTTGTCATGCTCGATTACAACGCTTTCTTTTGAGGTTCTGTGGAGTAGCTAAAAACTAACGAGCACAATTAGAGTTTGTTTTTAATTCCTTTGCTGAGTTGTACTTGGAAAGTTGTTTCGAAGACTTGTTCATGCTCGATGGAAAATTTATTGGATATTGATCTTGAAAAGCTTTGGTAAGACCATGAACGGGGTTGGAATTTGTTTGGATTGTAAAAATTCAAACAATGCTTGTTTTTCTGTGGAATTGATAGTAGTTTCGGTAAAGCTGAGTCCAGAAGAAGCTTGATTGATTGCTGCAGTAACTTGATTACATTTAGTTTGTTTTAAACTTAATTTGTACTCTATTTTTTGGTATCTTTTGCAGGGGTTTCCTCGTTCGGACATTGACATTCCAGTTATTAGGTCCGAGCGTCGTCAGCTGACTGGTAGATTGCTAATCTTTTCATTGTAGACATAGTTGCATTTGCCAACTCTAGAATCTCTCACTGTCTCTAAACATTCTAGAATTCCTCTCTACACAAATTTCCCAAATAATAGAAAAATATTAGCATGCCATAGGATTTTGGCCTTCTCCCTCGATCATGGCCCTGAATCTCTACTTCATGCTAGAGAGACTTTGAAATCACCTCGGAATCTGTACCAAATAGACTAAGCTTAGTGGCACCTCCACAGAATATGGTTAAGGCCCTTGGACGCTCCTCTGCACAGAAGCACAGAAAAGGAGTAGTGCCCTGCATACAACCTAAAGTATTGACTTTCTTATGAAAGACTGACTTGCTAGGCAAAGAACTTATTCTTCTTTGGAATCTAAGCCTTCCAGAGCAAGACAAACAAAGGGATCACAGGGGAAAGCAAGGGAACAATAGAAAGATAGGAAGAGAAGCCCTAGGGCGGGGTCCAAGAATGCACTTCACCCTTCAAGAATTCAAAAGTAAAAGAAAGGTAGAGGCCTCCAACAATTCCCTGTCTTAGAGGGGGATGGAGAAACCCAAAAAGTTTTAGTAAGGAAAATTAAAAAAAAAAAAAAATTAAGTCGATTCAAACTTTCCAACGAGGTCTCTTTAATCTTAGAGTTAGTGGATACTCTATTCCAAAAAAAAAATTGATGTAATGACTCTATATGCATGTCACTATCGGTCTGTGCGTAAAACTATTTAAACACATTTCATATTAAAATTTGTCATGGACTTAAATATTCATAAAGTTGCAAACATAACAAAATCAAAATGGAAATAAAGATAAAACATCCCCTAAAAACTGAGCTATCCTAACAATGAAAATATAATTAGAATGTGGAAAAGTTTGTCTACAGCTTTATTTTATGACCTCAGCAACGCCATCATTCGTACACAGGACTCTTGTCTTTATTTGGAAAAATGTTTAATAATAATAAGATGAATATTTAAAAATACTCAATAAGTGATCCCACTACTAGAGTTGGCAAATGCAAACACATGACTACGTTTTCGTGTTTTATGGAATCTAAAATCATGTCTGTAGCCTTCAATTCAAATTTAATTCCCAGGTAGATTTGGATGCATAGTACTTCTCTACACAAGCTCACGCACATTCACACAGACTCACTAGGAAAATACCCCGTTTTTGTAAACCCTAGGCCTGTATAGGCTTACGGATTCTCCACAACCAATGCTTTCGAGTTTGAAGCTTGAAGCCAAAATTAGCAAAGGGGAAATGCTTGTAGAAGGTTTCTAAACCGAATGAGAGGGTATTTGAGAGGAGTGGAGGTATAGAGGATCTGAATTGACCGCAAGAAGTTAAACACGTGAAAATTCTGGCAACTCACTGGAATTCATGCAACCGTCGATGACCAACTAAGTTGGAAATGTGTTCTTCTTCTCTATTCTGCGACTTAGGTGTATAAAGATTTGAATCAAAATGTGGAATTTATTCTTATTTCTGTTGTTTCCCATAGTGAGATATTACTTCTGAGTTCTGAATGCCTCTGTAAGTCCACTGTCTACTTGCTTTTTCATTTTGGATGGTGGGATGCAAATAGTAGATCAAGAGGTTCGCTATTAATGTCTTCCTGATACTAAATATCGACTTATTTTCTTCAAGCATATCACTAAATGAAGATTTCTTCATTTTATAACATTTCTCACAAATTATTATACTTTGAAATGTTGACCTTCTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGAGCTGAGAAATGACCATACGGAGATCACTGAAAAGATTAATCAGAACATACAAATTTTGCATTCTGCAAAGCCTGCTTCGAGCTTGGCACTCTCTAAGGATGCAGGTAATTGTGAGATAGATGCTATGCTGCAGAATAACACATCGTTTATCCTTGCATGCCTCAGCTGCGGCTGCACTAGAATTTCTATGCCATAGTTAACTAACTCATGGAGGTTTCCACACTTATACACTCATAGTTTGTTGCTTGGCTCCCCCTTTTTGTGGGCTTCTTTTTTATTGCCCTTCTCGATTAAACTTTAATGCCCTTCTCAACTATATATCATTTGGATTCTGCTTCTGTGTTGCCTAATTGTCTTTGTGGGGGAATTGATCTCCCCTCGCGTTTACGGTTGCCTTTTCAAGAATTTTGTTCTTATGAAACTTTCTTGTGAAACAAAAGTAACAATAATGATAACCAGAATAGAAAAGCCATCACATGCCTGCTGATTTCACAAGTACATATATCCTGTACTAGAATCACCTGCAGATATCTCTATTGAAAATTGTCTCGTGATATGTGTGCCATTTGAATAATTATCATGGGATCAATCCTGATTCTACCTATCTCATGCATCTATTAGGGAATACAGAGGTTTCAAATGGCCAAAGGTCATCTGTCACAACTGTTGCAGTACCATCCTCAAATGTATCGTCCACTGCAATGGACATAGATGCAAATGGAGGTATACCTTTTGCACTGGTTGACGAAATAGCCGATGCATCGCCAGCAGCAGATGATGGATTACAACTAGGCGATCAAGTTCTTAAATTTGGGAATGTAGAAGGCGGTGATGTTCTGTTGCATAGGCTTGCCTCTGAAGCACAGAGTAATCAAGGTCGTCCAATACCTGTTGTGGTTACGAGGCATGGTACTCCAGTCAATTTAACCGTGACACCCAGATCATGGCATGGCCGGGGTCTCCTTGGGTATGTGTGTTGCTCGTCCTTTCTATACCCGCTTAATTCTCAATTCAATGGTGAATGTTCTACTAGACCTGACCACTAATTCATTGCTATTGGGTGCTTGCAGATGCCATTTTCGGATGTTGTAGCTGGCTCTAACCACAATTTCAACCTGTCCCTGGTGGCTGTTGATAAAAACAGTAACCATTTCTGCTCAACTCTCATGTTCTACACTCAATCTACTGGTTTAATTCTAGGTTCCACGTGTTTGACTGGTTTTATAATCCAATTATTGCCCACACTGCCCTTTTTTTTTTTTGTCATTTTGCATAGATTTTCTGTAAATTGAAACAATAGGATAAGTTGCAGTTTTATGCTATTTTAGTGGTGTACTTCTTATGATGTCAATCTTTACTGTTTCTTGTTGCTTTGTGTGTAAAGTTACTTCAGAAGACATGATACTTTTCTTGAGAACATCATTTTGTTAATGGAATCAAAGGACTTTTAGCTTA

mRNA sequence

TGTTTCAATTCCATTTTGAAAGCTTTGGATCGGGAAAAATGGTGGCTTCCAATTTGAAGTCGGAGACTATGGATCTGATGCAGAAGAGGAGCGCTATCGAGGCCCAGATGGATGCCATCATTTCGCGCCTTTGTCAGCCTGGAGGTCCTGGACTCTCTGGAAATCTCGTCGACTCTGAGGTGTATAAAGATTTGAATCAAAATGTGGAATTTATTCTTATTTCTGTTGTTTCCCATAGTGAGATATTACTTCTGAGTTCTGAATGCCTCTAGCTGAGAAATGACCATACGGAGATCACTGAAAAGATTAATCAGAACATACAAATTTTGCATTCTGCAAAGCCTGCTTCGAGCTTGGCACTCTCTAAGGATGCAGGTAATTGGAATACAGAGGTTTCAAATGGCCAAAGGTCATCTGTCACAACTGTTGCAGTACCATCCTCAAATGTATCGTCCACTGCAATGGACATAGATGCAAATGGAGGTATACCTTTTGCACTGGTTGACGAAATAGCCGATGCATCGCCAGCAGCAGATGATGGATTACAACTAGGCGATCAAGTTCTTAAATTTGGGAATGTAGAAGGCGGTGATGTTCTGTTGCATAGGCTTGCCTCTGAAGCACAGAGTAATCAAGGTCGTCCAATACCTGTTGTGGTTACGAGGCATGGTACTCCAGTCAATTTAACCGTGACACCCAGATCATGGCATGGCCGGGGTCTCCTTGGATGCCATTTTCGGATGTTGTAGCTGGCTCTAACCACAATTTCAACCTGTCCCTGGTGGCTGTTGATAAAAACAGTAACCATTTCTGCTCAACTCTCATGTTCTACACTCAATCTACTGGTTTAATTCTAGGTTCCACGTGTTTGACTGGTTTTATAATCCAATTATTGCCCACACTGCCCTTTTTTTTTTTTGTCATTTTGCATAGATTTTCTGTAAATTGAAACAATAGGATAAGTTGCAGTTTTATGCTATTTTAGTGGTGTACTTCTTATGATGTCAATCTTTACTGTTTCTTGTTGCTTTGTGTGTAAAGTTACTTCAGAAGACATGATACTTTTCTTGAGAACATCATTTTGTTAATGGAATCAAAGGACTTTTAGCTTA

Coding sequence (CDS)

ATGGACATAGATGCAAATGGAGGTATACCTTTTGCACTGGTTGACGAAATAGCCGATGCATCGCCAGCAGCAGATGATGGATTACAACTAGGCGATCAAGTTCTTAAATTTGGGAATGTAGAAGGCGGTGATGTTCTGTTGCATAGGCTTGCCTCTGAAGCACAGAGTAATCAAGGTCGTCCAATACCTGTTGTGGTTACGAGGCATGGTACTCCAGTCAATTTAACCGTGACACCCAGATCATGGCATGGCCGGGGTCTCCTTGGATGCCATTTTCGGATGTTGTAG
Homology
[Close]
BLAST of CmoCh05G010590 vs. Swiss-Prot
Match: PSMD9_HUMAN (26S proteasome non-ATPase regulatory subunit 9 OS=Homo sapiens GN=PSMD9 PE=1 SV=3)

HSP 1 Score: 67.8 bits (164), Expect = 7.4e-11
Identity = 33/82 (40.24%), Postives = 51/82 (62.20%), Query Frame = 1 

Query: 11  FALVDEIADASPAADDGLQLGDQVLKFGNVEGGDV-LLHRLASEAQSNQGRPIPVVVTRH 70
           FA V+ I+  SPA+  GLQ+ D++++FG+V   +   LH + S  Q ++G+P+ V V R 
Sbjct: 136 FAKVNSISPGSPASIAGLQVDDEIVEFGSVNTQNFQSLHNIGSVVQHSEGKPLNVTVIRR 195

Query: 71  GTPVNLTVTPRSWHGRGLLGCH 92
           G    L + P  W G+GLLGC+
Sbjct: 196 GEKHQLRLVPTRWAGKGLLGCN 217

[Close]
BLAST of CmoCh05G010590 vs. Swiss-Prot
Match: PSMD9_RAT (26S proteasome non-ATPase regulatory subunit 9 OS=Rattus norvegicus GN=Psmd9 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.1e-10
Identity = 33/86 (38.37%), Postives = 53/86 (61.63%), Query Frame = 1 

Query: 11  FALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVL-LHRLASEAQSNQGRPIPVVVTRH 70
           FA V+ I+  SPA+  GLQ+ D++++FG+V   +   L  + +  Q ++G+P+ V+V R 
Sbjct: 135 FARVNSISPGSPASIAGLQVDDEIVEFGSVNTQNFQSLQNVGTVVQHSEGKPLNVMVIRR 194

Query: 71  GTPVNLTVTPRSWHGRGLLGCHFRML 96
           G    L +TP  W G+GLLGC+   L
Sbjct: 195 GEKHQLRLTPTRWAGKGLLGCNITPL 220

[Close]
BLAST of CmoCh05G010590 vs. Swiss-Prot
Match: PSMD9_BOVIN (26S proteasome non-ATPase regulatory subunit 9 OS=Bos taurus GN=PSMD9 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.8e-10
Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 1 

Query: 11  FALVDEIADASPAADDGLQLGDQVLKFGNVEGGDV-LLHRLASEAQSNQGRPIPVVVTRH 70
           FA V+ I+  SPA+  GLQ+ D++L+FG+V   +   L  + S  Q ++G+P+ V V R 
Sbjct: 134 FAKVNSISPGSPASIAGLQVDDEILEFGSVNTQNFQSLQNIGSVVQHSEGKPLNVTVMRR 193

Query: 71  GTPVNLTVTPRSWHGRGLLGCH 92
           G    L + P  W G+GLLGC+
Sbjct: 194 GEKHQLRLVPTRWAGKGLLGCN 215

[Close]
BLAST of CmoCh05G010590 vs. Swiss-Prot
Match: PSMD9_YEAST (Probable 26S proteasome regulatory subunit p27 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NAS2 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.8e-10
Identity = 31/89 (34.83%), Postives = 52/89 (58.43%), Query Frame = 1 

Query: 9   IPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD-VLLHRLASEAQSNQGRPIPVVVT 68
           IPFA + E+   SP+    +++ D+++  GNV   +   L  +      N+ RP+PV++ 
Sbjct: 132 IPFAFISEVVPGSPSDKADIKVDDKLISIGNVHAANHSKLQNIQMVVMKNEDRPLPVLLL 191

Query: 69  RHGTPVNLTVTP-RSWHGRGLLGCHFRML 96
           R G  +  ++TP R+W+GRGLLGC  + L
Sbjct: 192 REGQILKTSLTPSRNWNGRGLLGCRIQEL 220

[Close]
BLAST of CmoCh05G010590 vs. Swiss-Prot
Match: PSMD9_MOUSE (26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus GN=Psmd9 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.3e-09
Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 1 

Query: 11  FALVDEIADASPAADDGLQLGDQVLKFGNVEGGDV-LLHRLASEAQSNQGRPIPVVVTRH 70
           FA V+ I+  SPA+  GLQ+ D++++FG+V   +   +  + +  Q ++G+P+ V V R 
Sbjct: 135 FARVNSISPGSPASIAGLQVDDEIVEFGSVNTQNFQSVQNVGTVVQHSEGKPLNVTVIRR 194

Query: 71  GTPVNLTVTPRSWHGRGLLGCH 92
           G    L + P  W G+GLLGC+
Sbjct: 195 GEKHQLRLIPTRWAGKGLLGCN 216

[Close]
BLAST of CmoCh05G010590 vs. TrEMBL
Match: A0A0A0LGM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G035450 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.5e-42
Identity = 87/95 (91.58%), Postives = 89/95 (93.68%), Query Frame = 1 

Query: 1   MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGR 60
           MDIDANG IPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD LL RLASEAQ+NQGR
Sbjct: 135 MDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDLLRRLASEAQNNQGR 194

Query: 61  PIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML 96
            IPVVV RHGTPVNLTVTPRSW GRGLLGCHFRM+
Sbjct: 195 AIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 229

[Close]
BLAST of CmoCh05G010590 vs. TrEMBL
Match: I3SW57_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 9.6e-34
Identity = 71/95 (74.74%), Postives = 81/95 (85.26%), Query Frame = 1 

Query: 1   MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGR 60
           MD+D     PFA+VDEIADASPA +DGLQLGDQ+LKFGNVE GD LL RL+SE+QSN  R
Sbjct: 134 MDVDVLVSRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDDLLQRLSSESQSNLDR 193

Query: 61  PIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML 96
           PIPVV+TR GT VNLT+TPR+W GRGLLGCHFR+L
Sbjct: 194 PIPVVITRQGTVVNLTITPRTWQGRGLLGCHFRIL 228

[Close]
BLAST of CmoCh05G010590 vs. TrEMBL
Match: V7B1D5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G195100g PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.7e-33
Identity = 69/95 (72.63%), Postives = 80/95 (84.21%), Query Frame = 1 

Query: 1   MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGR 60
           MD+D     PFA+VDEIADASPA +DGLQLGDQ+LKFGNVE GD LL RL+SEAQSN GR
Sbjct: 128 MDVDVLISRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDNLLQRLSSEAQSNLGR 187

Query: 61  PIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML 96
            +PVV+ R GT +N+T+TPRSW GRGLLGCHFR+L
Sbjct: 188 AVPVVIVRQGTVINITITPRSWQGRGLLGCHFRIL 222

[Close]
BLAST of CmoCh05G010590 vs. TrEMBL
Match: V7AXA1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G195100g PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.7e-33
Identity = 69/95 (72.63%), Postives = 80/95 (84.21%), Query Frame = 1 

Query: 1   MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGR 60
           MD+D     PFA+VDEIADASPA +DGLQLGDQ+LKFGNVE GD LL RL+SEAQSN GR
Sbjct: 134 MDVDVLISRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDNLLQRLSSEAQSNLGR 193

Query: 61  PIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML 96
            +PVV+ R GT +N+T+TPRSW GRGLLGCHFR+L
Sbjct: 194 AVPVVIVRQGTVINITITPRSWQGRGLLGCHFRIL 228

[Close]
BLAST of CmoCh05G010590 vs. TrEMBL
Match: A0A061GJ37_THECC (26S proteasome regulatory subunit, putative isoform 1 OS=Theobroma cacao GN=TCM_037055 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 4.8e-33
Identity = 68/94 (72.34%), Postives = 79/94 (84.04%), Query Frame = 1 

Query: 2   DIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGRP 61
           D+D    +PFA+VDEIADASPAA+DGLQLGDQ++KFGNV+ GD LL RLASEAQ NQG P
Sbjct: 134 DVDMISSVPFAMVDEIADASPAAEDGLQLGDQIVKFGNVKAGDNLLQRLASEAQVNQGHP 193

Query: 62  IPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML 96
           IPV++ R G  VNL VTPR+W GRGLLGCHFRM+
Sbjct: 194 IPVIIMRQGALVNLAVTPRTWQGRGLLGCHFRMM 227

[Close]
BLAST of CmoCh05G010590 vs. TAIR10
Match: AT5G57950.1 (AT5G57950.1 26S proteasome regulatory subunit, putative)

HSP 1 Score: 136.3 bits (342), Expect = 9.5e-33
Identity = 66/95 (69.47%), Postives = 77/95 (81.05%), Query Frame = 1 

Query: 1   MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGR 60
           MD+D    IPFA+VDEI ++SPAA+ GLQLGDQVLKFGNVEGGD LL RLA+EAQSNQG+
Sbjct: 133 MDVDVVTSIPFAMVDEINESSPAAEGGLQLGDQVLKFGNVEGGDNLLQRLAAEAQSNQGQ 192

Query: 61  PIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML 96
            + V V R G  V L+VTPR W GRGLLGCHFR++
Sbjct: 193 AVSVQVMRQGAKVVLSVTPRIWQGRGLLGCHFRLV 227

[Close]
BLAST of CmoCh05G010590 vs. NCBI nr
Match: gi|449453980|ref|XP_004144734.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 3.6e-42
Identity = 87/95 (91.58%), Postives = 89/95 (93.68%), Query Frame = 1 

Query: 1   MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGR 60
           MDIDANG IPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD LL RLASEAQ+NQGR
Sbjct: 135 MDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDLLRRLASEAQNNQGR 194

Query: 61  PIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML 96
            IPVVV RHGTPVNLTVTPRSW GRGLLGCHFRM+
Sbjct: 195 AIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 229

[Close]
BLAST of CmoCh05G010590 vs. NCBI nr
Match: gi|659070006|ref|XP_008452868.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 4.7e-42
Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 1 

Query: 1   MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGR 60
           MDIDANG IPFALVDE+ADASPAADDGLQLGDQVLKFGNVEGGD LL RLASEAQ+NQGR
Sbjct: 135 MDIDANGSIPFALVDEVADASPAADDGLQLGDQVLKFGNVEGGDDLLRRLASEAQNNQGR 194

Query: 61  PIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML 96
            IPVVV RHGTPVNLTVTPRSW GRGLLGCHFRM+
Sbjct: 195 AIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 229

[Close]
BLAST of CmoCh05G010590 vs. NCBI nr
Match: gi|388512875|gb|AFK44499.1| (unknown [Lotus japonicus])

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-33
Identity = 71/95 (74.74%), Postives = 81/95 (85.26%), Query Frame = 1 

Query: 1   MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGR 60
           MD+D     PFA+VDEIADASPA +DGLQLGDQ+LKFGNVE GD LL RL+SE+QSN  R
Sbjct: 134 MDVDVLVSRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDDLLQRLSSESQSNLDR 193

Query: 61  PIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML 96
           PIPVV+TR GT VNLT+TPR+W GRGLLGCHFR+L
Sbjct: 194 PIPVVITRQGTVVNLTITPRTWQGRGLLGCHFRIL 228

[Close]
BLAST of CmoCh05G010590 vs. NCBI nr
Match: gi|593329701|ref|XP_007138277.1| (hypothetical protein PHAVU_009G195100g [Phaseolus vulgaris])

HSP 1 Score: 148.7 bits (374), Expect = 5.3e-33
Identity = 69/95 (72.63%), Postives = 80/95 (84.21%), Query Frame = 1 

Query: 1   MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGR 60
           MD+D     PFA+VDEIADASPA +DGLQLGDQ+LKFGNVE GD LL RL+SEAQSN GR
Sbjct: 128 MDVDVLISRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDNLLQRLSSEAQSNLGR 187

Query: 61  PIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML 96
            +PVV+ R GT +N+T+TPRSW GRGLLGCHFR+L
Sbjct: 188 AVPVVIVRQGTVINITITPRSWQGRGLLGCHFRIL 222

[Close]
BLAST of CmoCh05G010590 vs. NCBI nr
Match: gi|593329703|ref|XP_007138278.1| (hypothetical protein PHAVU_009G195100g [Phaseolus vulgaris])

HSP 1 Score: 148.7 bits (374), Expect = 5.3e-33
Identity = 69/95 (72.63%), Postives = 80/95 (84.21%), Query Frame = 1 

Query: 1   MDIDANGGIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDVLLHRLASEAQSNQGR 60
           MD+D     PFA+VDEIADASPA +DGLQLGDQ+LKFGNVE GD LL RL+SEAQSN GR
Sbjct: 134 MDVDVLISRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDNLLQRLSSEAQSNLGR 193

Query: 61  PIPVVVTRHGTPVNLTVTPRSWHGRGLLGCHFRML 96
            +PVV+ R GT +N+T+TPRSW GRGLLGCHFR+L
Sbjct: 194 AVPVVIVRQGTVINITITPRSWQGRGLLGCHFRIL 228

The following BLAST results are available for this feature:
BLAST of CmoCh05G010590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSMD9_HUMAN7.4e-1140.2426S proteasome non-ATPase regulatory subunit 9 OS=Homo sapiens GN=PSMD9 PE=1 SV=... [more]
PSMD9_RAT2.1e-1038.3726S proteasome non-ATPase regulatory subunit 9 OS=Rattus norvegicus GN=Psmd9 PE=... [more]
PSMD9_BOVIN2.8e-1040.2426S proteasome non-ATPase regulatory subunit 9 OS=Bos taurus GN=PSMD9 PE=1 SV=1[more]
PSMD9_YEAST2.8e-1034.83Probable 26S proteasome regulatory subunit p27 OS=Saccharomyces cerevisiae (stra... [more]
PSMD9_MOUSE5.3e-0936.5926S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus GN=Psmd9 PE=1 SV=... [more]
BLAST of CmoCh05G010590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGM6_CUCSA2.5e-4291.58Uncharacterized protein OS=Cucumis sativus GN=Csa_2G035450 PE=4 SV=1[more]
I3SW57_LOTJA9.6e-3474.74Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
V7B1D5_PHAVU3.7e-3372.63Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G195100g PE=4 SV=1[more]
V7AXA1_PHAVU3.7e-3372.63Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G195100g PE=4 SV=1[more]
A0A061GJ37_THECC4.8e-3372.3426S proteasome regulatory subunit, putative isoform 1 OS=Theobroma cacao GN=TCM_... [more]
BLAST of CmoCh05G010590 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G57950.19.5e-3369.47 26S proteasome regulatory subunit, putative[more]
BLAST of CmoCh05G010590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453980|ref|XP_004144734.1|3.6e-4291.58PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Cucumis sativus][more]
gi|659070006|ref|XP_008452868.1|4.7e-4290.53PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Cucumis melo][more]
gi|388512875|gb|AFK44499.1|1.4e-3374.74unknown [Lotus japonicus][more]
gi|593329701|ref|XP_007138277.1|5.3e-3372.63hypothetical protein PHAVU_009G195100g [Phaseolus vulgaris][more]
gi|593329703|ref|XP_007138278.1|5.3e-3372.63hypothetical protein PHAVU_009G195100g [Phaseolus vulgaris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042023 DNA endoreduplication
biological_process GO:0043248 proteasome assembly
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0051788 response to misfolded protein
biological_process GO:0008150 biological_process
biological_process GO:0070682 proteasome regulatory particle assembly
cellular_component GO:0000502 proteasome complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G010590.1CmoCh05G010590.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainGENE3DG3DSA:2.30.42.10coord: 11..91
score: 2.2
IPR001478PDZ domainunknownSSF50156PDZ domain-likecoord: 12..93
score: 7.62
NoneNo IPR availablePANTHERPTHR1265126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9coord: 1..95
score: 2.2
NoneNo IPR availablePANTHERPTHR12651:SF126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9coord: 1..95
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh05G010590CmaCh05G010500Cucurbita maxima (Rimu)cmacmoB787
CmoCh05G010590Cp4.1LG11g08500Cucurbita pepo (Zucchini)cmocpeB721
CmoCh05G010590Bhi06G001249Wax gourdcmowgoB0920
CmoCh05G010590Carg11979Silver-seed gourdcarcmoB0769
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G010590Watermelon (97103) v2cmowmbB785
CmoCh05G010590Wax gourdcmowgoB0928
CmoCh05G010590Wax gourdcmowgoB0935
CmoCh05G010590Cucurbita moschata (Rifu)cmocmoB153
CmoCh05G010590Cucumber (Gy14) v1cgycmoB0179
CmoCh05G010590Cucurbita maxima (Rimu)cmacmoB195
CmoCh05G010590Wild cucumber (PI 183967)cmocpiB787
CmoCh05G010590Cucumber (Chinese Long) v2cmocuB784
CmoCh05G010590Melon (DHL92) v3.5.1cmomeB724
CmoCh05G010590Watermelon (Charleston Gray)cmowcgB700
CmoCh05G010590Watermelon (97103) v1cmowmB757
CmoCh05G010590Cucurbita pepo (Zucchini)cmocpeB748
CmoCh05G010590Bottle gourd (USVL1VR-Ls)cmolsiB706
CmoCh05G010590Cucumber (Gy14) v2cgybcmoB243
CmoCh05G010590Melon (DHL92) v3.6.1cmomedB821
CmoCh05G010590Silver-seed gourdcarcmoB1224
CmoCh05G010590Cucumber (Chinese Long) v3cmocucB0924