CmoCh05G009350 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G009350
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Paired amphipathic helix protein Sin3-like 4
Location	Cmo_Chr05 : 7366112 .. 7371408 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTGCTATAGATCACCGTAGTTAACAGGTGCTTTGTCAGAAATGAAGAACCGCGGGGAGGCAGATGGCAGTACCCGGAAATTAACAGCGGAGGATGCCCTAGAATTTCTCAAGAATGTGAAGGACGTCATTGGAAACGAGGCGGAAAAATATGAAGAATTTCTTCAACTCATGAAGGATTTAGCGTTTCAAAGGTTTGGTTGCAATATAAAATCTAGTTTATAGGTTTCTCCATTTTAGTTTTGAAGTGATCTGTGTTGTTATCGATTTGCAGAATTGACATTGTGGGCGTCATAACAGGGGTAAAGCGTCTATTCAGAGGTCATAATGACCTGATTTTGGGCTTTAATACTTTTTTGCCACAAAGATATGCAATAGCTTGTCCTCTTGAGGATGAAACGCCTCCTCGAAGGAGGCGGCCTCTTAAACTTGGAGACGCTTTGGACTATGTCAGTGAGGTTAAGGTAAATTTTGTCTCAAAACTTGAAAACTTTCATTTTAACCATTGAAGTTTGGAATTTGATGTTTTTTCTCGTTAAATTCATGATGGAAAAGTTTGTATCTGCTTATATATTGTTGAAATGAACAATCTAAACACATGCGGGATGAAAATTTTGGTTTAGGTTTAGTGAAGAAGTTACAAACAGAAGAAAGAAAATTTGGGGCTTGAGGTTGAAGGATGAGGACGACCAGATGAACAATGTGTTTCTATTGTTCACTTATGCAAATTTAACCTTTTTTGTCTATGAATTTAATAGCGAAAGGTTGTTTTGAAACAAACTTCAAACTTCAAAAGTTAAAAGAAGCATTTACGAGTTTCGGTATAAATGAAACCAACTTCGTAGTTTAGGAGTATTTTCAATCACTTTTTGACGTAGTTTGATGTCATTATTTTGCTTTCCTGCATTGTATACATTTTTGTTTTTGTATATGCAGAGACGGTTTGAAGGTGAGTTCCATATATTCAATTCATTTATGAGAAATTTGCATTTGTACAAAAGAGGAAAAAAGCCTCTAAATGAGCTCCACCGGGAGGTTTGTTTTCACTTTTAAAGTTCAAGTAAGAAACAAAATTTCTGTTTTTGTTGCTTCATTCAAGATTAATAGTTTTGGGTTTGCAGGTTTGTGTACTGATGCAAGACCACCCAGACCTTGTTGAGGGTTTTGCTGATTTTCTTCCTTGTCCTTCACTCACAACAACCTCAAACAATGATCCTGAGCAGAACATTGGTGTTGACCGTCCTGATGAAGAAGGTGATGAGCTTTCTGAAGTGGGTTTCATAATGTCCTAATCATAATGCAATGAAAAGATAATATTGTTTTCATTACACATCCTTTCTGCTTGGTGGTTCTGTTTGGTTATTCAAGTTTTTCGTCTCTGTTTAAACAAGATCTTGGCATTGATCAATATCTTTGTTCTTCTTGCTTAAAAAACCATTGTTCTTTTTTGGCGTCTTTGAGTATTCTTTTTAATGCATCTGTATTCTTGGTGTCAGCGTTTCTTGTTCTCGTAAGGGTTCTAGCTTTTAGTCCTATTGATTCTCATTTTGCATTCAATTCTTCTTCCTTTTCACCAATCAATCAAAAGTTTGTTTCGTTTCTTTCTTTGGGGTCTGTAATATTGTCCCTGTATTTCATGACAGGTATGTCTTTAATTGAGAAGATGAATCAAAAGTTACCAGAAGTTGATGTTCCACAACAATTTGTGAAATGCCTTGATGTTTTTGACAGGGAAATAATCACTCCATCGGAACTGCATTCTATGGTATAGAAGAAACTCATTTGTTACTGTTATATTCGAAACTATGGATCATGCTCAATATTCTTGTGTTCTCAAGGGAAGATGTTTACTGATGTTGACGTGTATGACAGGTGGCTCTTCTACTAATTACACGTGTAGCTGACGTGGATTCGGAACACAGGGAAGATTTCTATAAGCGTTCAACTTTCAGGTTAGCATGTTTTTCCCTGTTTTTGTTTTTTGTTTTACTCTTCAACTCAATCCTTCTCACATTCAATTGCACCATTTTCTTGAATTTGAGTCGAGTCTGGAGGCTCTTGGTTTGATTACCCTTTAAAAGAAACTGTTACAGATTTAGGTTTTCATAATTTTGAACTGGAAAAAAGCTTGAATATGGGTCAGTTTTGTAACTCACATCTCAATCTTCCTTTAATCATGAACAAGGGAATTGATGGTTTGGTAAAGATTAGTTCCCTTCCAAACTCTTGAGTAAATATCTTGTTAGATCAGTCTTTAACCTTTTAGGGAAGCTTGAAGATAAGTCCAAGTCTAAACCATAATAGAAAATTAAGACAAAATTCTTATCAAGGAAGAACTCGCTTTTTTGTTTTTAATTTTTAAATATGGAGCTTATTAATACTATTTACACCTATTAATTTCTTTGTTTTGTTACCTATTTTATACTAAAAAATTTAAAATTTAAAATTTAAATTTATTGAACACTAATTTAATTAGGGTAATGACTATTTTACAAGTAATAATAATCTCAAACTAAGTCAAGTTAGTTTTGAAAAAAAATTGTAGTTGCACAAAGTCTCTTAAACTAACCCGATAGGGTCTATGTTTATTAAAGTATATAAGAAATTTAATTTAATTTTTATTTTTGTCTTCACCCTCTTTGTCGTTTTTTTTTTCTTTTTCTTTTATGATCAGTTGCTTCACTACCTTGTTTTCCAACTTGTCTGTTCTATAGTAAGTAATTAATACTAAATTGTTGTGATTTAGTTATTATAACTAAAATAATGTCTATTTTTGTGCTTTAAATATAAAACTATGTAATAAAGATAGATATCTAACTTCATATATAAAAAAGGGAAATAGACGTGATAAATAATAATTTTTTAAAAATGTCCATTTCAGTAATAAAGTCCTAATTTATGTGACTTTTTTTTTCTTCTCTTGAAGTTTTTATTTATTTATTTATTTATTTTAATTTTGAAACAGGAATGGATGCAGGATTTACAAATATCACCTTGAAAAACCGACAATGACCAATCCAAAAGCCATAAACAAAAAAATTGAAGTAATTAAACACAAAATCAATAGTTTAAAAGTATAGCGGATATGATTTTGGGGGTACTAACATACATCACCATATTCAATTAGGTGTTTTGATTAAATTTCTTTTTATAAGATCTACAAGTTTGAAAGAATAACAAACAAAAAAAAAAATTGAAATTTGTGAACCAAAAATTTAAATGATAGTGGCGCCGACTTGAGAAGGTACAGCCTCCCTAAATCAGAGGTCAATATAGGGTAAATAAGAACAAAAAAGTGGCAACTCAAATTCATTAATTTTCAATATTTTATTCCGTCCAATTTCTCCATCTTTTTTGTTTTAGGACCCAAAAATAAAGGTTTTCTTAATCTTCAAATTTTAAAATTAAGAAAAAACTTGTAATTTAATATTAAATTTATACCATTTTGAGTGTATGACAAACTCTTTCAATTTATTTAATCTTTTTTTATTTTTTATTTTTTATTTTTTTTATTAATATATTTCTTAAATCAAAGTCAATTTTGATCAATATAACTAAATAAATTAAGGCAACTTGCATTTAATCTAAAAAAATGTTAAAAAGTGGTCAAATCTCGACTCCTATATTATTTATTCGGCAAGCACTAGCTCCCAGTGCGACTTCATAAAAAGCAAGAAAAGATAAGATCGAAGCGCCCGGTCACTAGTCACTCTTTTTTATAAGGTTGATTTGATGATCTACTAGTTAATTCAAGATCTGATTGATCGCTAATCACTCTTTGGTATAGAGTTGATTTGATGATCTACTAGTTGATTCAAGATCTGGGTGATTCACCCATTTCGCGTTTCCAGCAACCATTTATTTTATTTTTGATATTTTTTCTTTTTTTTTTTATTGATATTTTTCTTTCTTTAGGGCTTACGGACGAATGATTTTACCGGTAATACTTGGGTGTACATGCTACAGGAAGAAAAAAAAAAAAAAAAACAAAAACAAAAAGACAATGAGCAGATACATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAACAAAAACAAAAAGACAATGAGCAGATACATAATTTCTTTTGTGATGTGAATCCAAGAAACAAATAAAGAAATGCTAAATCGCGCGTCTCAACAGGAAATCAACTTAACCTCAAAATATAAAATCATCCAAATATTTACCAAAACTCAGCTTTAAATTTGAGCAAGCACTACTACAACATCATGGAACTACTAGTATAGAATGGAACTTCAACAAAAAAAATATAAATAAATAAAAATAAAAAAGGGAAAATGAAGAGCCAGGTTTTGGCATTTCGAACCCAAACTGGAAACCTTCGTTTCTCATTAACTAGAGGAGTGAATACAGGGAACCCCTGGTACAGCTTTAA

mRNA sequence

GAGTGCTATAGATCACCGTAGTTAACAGGTGCTTTGTCAGAAATGAAGAACCGCGGGGAGGCAGATGGCAGTACCCGGAAATTAACAGCGGAGGATGCCCTAGAATTTCTCAAGAATGTGAAGGACGTCATTGGAAACGAGGCGGAAAAATATGAAGAATTTCTTCAACTCATGAAGGATTTAGCGTTTCAAAGAATTGACATTGTGGGCGTCATAACAGGGGTAAAGCGTCTATTCAGAGGTCATAATGACCTGATTTTGGGCTTTAATACTTTTTTGCCACAAAGATATGCAATAGCTTGTCCTCTTGAGGATGAAACGCCTCCTCGAAGGAGGCGGCCTCTTAAACTTGGAGACGCTTTGGACTATGTCAGTGAGGTTAAGAGACGGTTTGAAGGTGAGTTCCATATATTCAATTCATTTATGAGAAATTTGCATTTGTACAAAAGAGGAAAAAAGCCTCTAAATGAGCTCCACCGGGAGGTTTGTGTACTGATGCAAGACCACCCAGACCTTGTTGAGGGTTTTGCTGATTTTCTTCCTTGTCCTTCACTCACAACAACCTCAAACAATGATCCTGAGCAGAACATTGGTGTTGACCGTCCTGATGAAGAAGGTATGTCTTTAATTGAGAAGATGAATCAAAAGTTACCAGAAGTTGATGTTCCACAACAATTTGTGAAATGCCTTGATGTTTTTGACAGGGAAATAATCACTCCATCGGAACTGCATTCTATGGTGGCTCTTCTACTAATTACACGTGTAGCTGACGTGGATTCGGAACACAGGGAAGATTTCTATAAGCGTTCAACTTTCAGGAGTGAATACAGGGAACCCCTGGTACAGCTTTAA

Coding sequence (CDS)

ATGAAGAACCGCGGGGAGGCAGATGGCAGTACCCGGAAATTAACAGCGGAGGATGCCCTAGAATTTCTCAAGAATGTGAAGGACGTCATTGGAAACGAGGCGGAAAAATATGAAGAATTTCTTCAACTCATGAAGGATTTAGCGTTTCAAAGAATTGACATTGTGGGCGTCATAACAGGGGTAAAGCGTCTATTCAGAGGTCATAATGACCTGATTTTGGGCTTTAATACTTTTTTGCCACAAAGATATGCAATAGCTTGTCCTCTTGAGGATGAAACGCCTCCTCGAAGGAGGCGGCCTCTTAAACTTGGAGACGCTTTGGACTATGTCAGTGAGGTTAAGAGACGGTTTGAAGGTGAGTTCCATATATTCAATTCATTTATGAGAAATTTGCATTTGTACAAAAGAGGAAAAAAGCCTCTAAATGAGCTCCACCGGGAGGTTTGTGTACTGATGCAAGACCACCCAGACCTTGTTGAGGGTTTTGCTGATTTTCTTCCTTGTCCTTCACTCACAACAACCTCAAACAATGATCCTGAGCAGAACATTGGTGTTGACCGTCCTGATGAAGAAGGTATGTCTTTAATTGAGAAGATGAATCAAAAGTTACCAGAAGTTGATGTTCCACAACAATTTGTGAAATGCCTTGATGTTTTTGACAGGGAAATAATCACTCCATCGGAACTGCATTCTATGGTGGCTCTTCTACTAATTACACGTGTAGCTGACGTGGATTCGGAACACAGGGAAGATTTCTATAAGCGTTCAACTTTCAGGAGTGAATACAGGGAACCCCTGGTACAGCTTTAA

Homology

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BLAST of CmoCh05G009350 vs. Swiss-Prot
Match: SNL3_ARATH (Paired amphipathic helix protein Sin3-like 3 OS=Arabidopsis thaliana GN=SNL3 PE=1 SV=3)

HSP 1 Score: 159.8 bits (403), Expect = 4.0e-38
Identity = 82/193 (42.49%), Postives = 125/193 (64.77%), Query Frame = 1


Query: 9   GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGH 68
           GS +KLT  DAL +LK VKD   ++  KY+EFL++MK+   QR+D  GVIT VK LF+GH
Sbjct: 5   GSAQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKELFKGH 64

Query: 69  NDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIFNSFM 128
            +LILGFNTFLP+ + I    ED  PP ++R ++  +A+ +V+++K RF+G+  ++ SF+
Sbjct: 65  QELILGFNTFLPKGFEITLQPEDGQPPLKKR-VEFEEAISFVNKIKTRFQGDDRVYKSFL 124

Query: 129 RNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRP 188
             L++Y+R  K + E+++EV +L +DH DL+  F  FLP  S T +    P     V   
Sbjct: 125 DILNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSATASI---PSVKTSV--- 184

Query: 189 DEEGMSLIEKMNQ 202
            E G+SL +K ++
Sbjct: 185 RERGVSLADKKDR 190

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BLAST of CmoCh05G009350 vs. Swiss-Prot
Match: SNL4_ARATH (Paired amphipathic helix protein Sin3-like 4 OS=Arabidopsis thaliana GN=SNL4 PE=3 SV=3)

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-37
Identity = 72/168 (42.86%), Postives = 115/168 (68.45%), Query Frame = 1


Query: 10  STRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHN 69
           S +KLT  DAL +LK VKD   ++ +KY+EFL++MKD   QR+D  GVI  VK LF+G+ 
Sbjct: 6   SAQKLTTNDALAYLKAVKDKFQDKRDKYDEFLEVMKDFKAQRVDTTGVILRVKELFKGNR 65

Query: 70  DLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIFNSFMR 129
           +LILGFNTFLP+ + I    ED+ P   ++P++  +A+ +V+++K RF+G+  ++ SF+ 
Sbjct: 66  ELILGFNTFLPKGFEITLRPEDDQPAAPKKPVEFEEAISFVNKIKTRFQGDDRVYKSFLD 125

Query: 130 NLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN 178
            L++Y++  K + E++ EV +L +DH DL+  F  FLP  S T ++N+
Sbjct: 126 ILNMYRKENKSITEVYHEVAILFRDHHDLLGEFTHFLPDTSATASTND 173

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BLAST of CmoCh05G009350 vs. Swiss-Prot
Match: SNL5_ARATH (Paired amphipathic helix protein Sin3-like 5 OS=Arabidopsis thaliana GN=SNL5 PE=2 SV=3)

HSP 1 Score: 147.5 bits (371), Expect = 2.1e-34
Identity = 77/171 (45.03%), Postives = 110/171 (64.33%), Query Frame = 1


Query: 9   GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGH 68
           G+T  LT  DAL +LK VKD+  +  EKYE FL +MKD   QR+D  GVI  VK LF+G+
Sbjct: 36  GTTGGLTTVDALTYLKAVKDMFQDNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGY 95

Query: 69  NDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIFNSFM 128
           +DL+LGFNTFLP+ Y I    EDE P   ++P+    A+++V+ +K RF G+   +  F+
Sbjct: 96  DDLLLGFNTFLPKGYKITLQPEDEKP---KKPVDFQVAIEFVNRIKARFGGDDRAYKKFL 155

Query: 129 RNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDP 180
             L++Y++  K +NE+++EV +L QDH DL+  F  FLP     + S NDP
Sbjct: 156 DILNMYRKETKSINEVYQEVTLLFQDHEDLLGEFVHFLP-DFRGSVSVNDP 202

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BLAST of CmoCh05G009350 vs. Swiss-Prot
Match: SNL1_ARATH (Paired amphipathic helix protein Sin3-like 1 OS=Arabidopsis thaliana GN=SNL1 PE=1 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 4.6e-34
Identity = 72/165 (43.64%), Postives = 109/165 (66.06%), Query Frame = 1


Query: 6   EADGSTR---KLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVK 65
           E  GS R   KLT  DAL +L+ VK++  ++ EKY+ FL++MKD   QR D  GVI  VK
Sbjct: 42  EEGGSRRVSQKLTTNDALSYLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVK 101

Query: 66  RLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFH 125
            LF+GHN+LI GFNTFLP+ Y I    ED+  P  ++ ++   A+++V+++K RF+ + H
Sbjct: 102 ELFKGHNNLIYGFNTFLPKGYEITLIEEDDALP--KKTVEFEQAINFVNKIKMRFKHDEH 161

Query: 126 IFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLP 168
           ++ SF+  L++Y++  K + E++ EV +L Q H DL+E F  FLP
Sbjct: 162 VYKSFLEILNMYRKENKEIKEVYNEVSILFQGHLDLLEQFTRFLP 204

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BLAST of CmoCh05G009350 vs. Swiss-Prot
Match: SNL2_ARATH (Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana GN=SNL2 PE=1 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 6.7e-33
Identity = 68/163 (41.72%), Postives = 110/163 (67.48%), Query Frame = 1


Query: 5   GEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRL 64
           GE   +T+KLT +DAL +LK VK++  ++ +KY+ FL++MKD   Q+ D  GVI+ VK L
Sbjct: 39  GEGGINTQKLTTDDALTYLKEVKEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKEL 98

Query: 65  FRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIF 124
           F+GHN+LI GFNTFLP+ + I   L+D   P  ++ ++  +A+ +V+++K RF+    ++
Sbjct: 99  FKGHNNLIFGFNTFLPKGFEIT--LDDVEAP-SKKTVEFEEAISFVNKIKTRFQHNELVY 158

Query: 125 NSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLP 168
            SF+  L++Y++  K + E++ EV  L +DH DL+E F  FLP
Sbjct: 159 KSFLEILNMYRKDNKDITEVYNEVSTLFEDHSDLLEEFTRFLP 198

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BLAST of CmoCh05G009350 vs. TrEMBL
Match: A0A0A0KQL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G484650 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51
Identity = 94/169 (55.62%), Postives = 134/169 (79.29%), Query Frame = 1


Query: 9   GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGH 68
           GS +KLT  DALE+LKNVKD+  ++ EKYE+FL++MK+   QRID VGVI  VK+LF+GH
Sbjct: 26  GSLQKLTTNDALEYLKNVKDIFRDKKEKYEDFLEVMKEFKAQRIDTVGVIARVKQLFKGH 85

Query: 69  NDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIFNSFM 128
            DLILGFNTFLP+ YAI CPLEDETPP++++P++  +A+++V ++K RFEG+ H++ SF+
Sbjct: 86  RDLILGFNTFLPKGYAITCPLEDETPPQKKKPVQFEEAINFVGKIKTRFEGDNHVYKSFL 145

Query: 129 RNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN 178
             L+LY++  K ++E++REV  L+QDHPDL+  F  FLP  S TT++N+
Sbjct: 146 EILNLYRKENKSISEVYREVSALLQDHPDLLREFVHFLPDASATTSNNH 194

[Close]

BLAST of CmoCh05G009350 vs. TrEMBL
Match: B9S2H7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0699610 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.4e-42
Identity = 86/196 (43.88%), Postives = 131/196 (66.84%), Query Frame = 1


Query: 5   GEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRL 64
           G A G  +KLT  DAL +LK VKD+  ++ +KY++FL++MKD   QRID  GVI  VK L
Sbjct: 55  GGASGGGQKLTTNDALAYLKAVKDIFQDKRDKYDDFLEVMKDFKAQRIDTAGVIARVKDL 114

Query: 65  FRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIF 124
           F+GH DLILGFNTFLP+ Y I  PLEDE PP +++P++  +A+++V+++K RF+G+ H++
Sbjct: 115 FKGHRDLILGFNTFLPKGYEITLPLEDEQPP-QKKPVEFEEAINFVNKIKTRFQGDDHVY 174

Query: 125 NSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIG 184
            SF+  L++Y++  K + E+++EV  L QDH DL+  F  FLP  S T +++  P     
Sbjct: 175 KSFLDILNMYRKENKSITEVYQEVATLFQDHNDLLMEFTHFLPDSSATASAHYAPSVRNS 234

Query: 185 VDRPDEEGMSLIEKMN 201
           + R     M  + +M+
Sbjct: 235 IHRDRSSAMPTMRQMH 249

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BLAST of CmoCh05G009350 vs. TrEMBL
Match: V4TPJ6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030507mg PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 9.4e-42
Identity = 82/163 (50.31%), Postives = 118/163 (72.39%), Query Frame = 1


Query: 5   GEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRL 64
           G   G  +KLT  DAL +LK VKD+  ++ EKY++FL++MKD   QRID  GVI  VK L
Sbjct: 34  GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93

Query: 65  FRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIF 124
           F+GH DLILGFNTFLP+ Y I  PLEDE PP  ++P++  +A+++V+++K RF+G+ H++
Sbjct: 94  FKGHRDLILGFNTFLPKGYEITLPLEDEQPP-PKKPVEFEEAINFVNKIKTRFQGDDHVY 153

Query: 125 NSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLP 168
            SF+  L++Y++  K + E+++EV  L QDHPDL+E F  FLP
Sbjct: 154 KSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195

[Close]

BLAST of CmoCh05G009350 vs. TrEMBL
Match: V4TJI4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030507mg PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 9.4e-42
Identity = 82/163 (50.31%), Postives = 118/163 (72.39%), Query Frame = 1


Query: 5   GEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRL 64
           G   G  +KLT  DAL +LK VKD+  ++ EKY++FL++MKD   QRID  GVI  VK L
Sbjct: 34  GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93

Query: 65  FRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIF 124
           F+GH DLILGFNTFLP+ Y I  PLEDE PP  ++P++  +A+++V+++K RF+G+ H++
Sbjct: 94  FKGHRDLILGFNTFLPKGYEITLPLEDEQPP-PKKPVEFEEAINFVNKIKTRFQGDDHVY 153

Query: 125 NSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLP 168
            SF+  L++Y++  K + E+++EV  L QDHPDL+E F  FLP
Sbjct: 154 KSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195

[Close]

BLAST of CmoCh05G009350 vs. TrEMBL
Match: A0A067H4P8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001681mg PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 9.4e-42
Identity = 82/163 (50.31%), Postives = 118/163 (72.39%), Query Frame = 1


Query: 5   GEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRL 64
           G   G  +KLT  DAL +LK VKD+  ++ EKY++FL++MKD   QRID  GVI  VK L
Sbjct: 34  GGGGGGAQKLTTNDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKEL 93

Query: 65  FRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIF 124
           F+GH DLILGFNTFLP+ Y I  PLEDE PP  ++P++  +A+++V+++K RF+G+ H++
Sbjct: 94  FKGHRDLILGFNTFLPKGYEITLPLEDEQPP-PKKPVEFEEAINFVNKIKTRFQGDDHVY 153

Query: 125 NSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLP 168
            SF+  L++Y++  K + E+++EV  L QDHPDL+E F  FLP
Sbjct: 154 KSFLDILNMYRKENKSITEVYQEVEALFQDHPDLLEEFTHFLP 195

[Close]

BLAST of CmoCh05G009350 vs. TAIR10
Match: AT1G24190.1 (AT1G24190.1 SIN3-like 3)

HSP 1 Score: 159.8 bits (403), Expect = 2.3e-39
Identity = 82/193 (42.49%), Postives = 125/193 (64.77%), Query Frame = 1


Query: 9   GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGH 68
           GS +KLT  DAL +LK VKD   ++  KY+EFL++MK+   QR+D  GVIT VK LF+GH
Sbjct: 5   GSAQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKELFKGH 64

Query: 69  NDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIFNSFM 128
            +LILGFNTFLP+ + I    ED  PP ++R ++  +A+ +V+++K RF+G+  ++ SF+
Sbjct: 65  QELILGFNTFLPKGFEITLQPEDGQPPLKKR-VEFEEAISFVNKIKTRFQGDDRVYKSFL 124

Query: 129 RNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRP 188
             L++Y+R  K + E+++EV +L +DH DL+  F  FLP  S T +    P     V   
Sbjct: 125 DILNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSATASI---PSVKTSV--- 184

Query: 189 DEEGMSLIEKMNQ 202
            E G+SL +K ++
Sbjct: 185 RERGVSLADKKDR 190

[Close]

BLAST of CmoCh05G009350 vs. TAIR10
Match: AT1G70060.1 (AT1G70060.1 SIN3-like 4)

HSP 1 Score: 158.3 bits (399), Expect = 6.6e-39
Identity = 72/168 (42.86%), Postives = 115/168 (68.45%), Query Frame = 1


Query: 10  STRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGHN 69
           S +KLT  DAL +LK VKD   ++ +KY+EFL++MKD   QR+D  GVI  VK LF+G+ 
Sbjct: 6   SAQKLTTNDALAYLKAVKDKFQDKRDKYDEFLEVMKDFKAQRVDTTGVILRVKELFKGNR 65

Query: 70  DLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIFNSFMR 129
           +LILGFNTFLP+ + I    ED+ P   ++P++  +A+ +V+++K RF+G+  ++ SF+ 
Sbjct: 66  ELILGFNTFLPKGFEITLRPEDDQPAAPKKPVEFEEAISFVNKIKTRFQGDDRVYKSFLD 125

Query: 130 NLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN 178
            L++Y++  K + E++ EV +L +DH DL+  F  FLP  S T ++N+
Sbjct: 126 ILNMYRKENKSITEVYHEVAILFRDHHDLLGEFTHFLPDTSATASTND 173

[Close]

BLAST of CmoCh05G009350 vs. TAIR10
Match: AT1G59890.2 (AT1G59890.2 SIN3-like 5)

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35
Identity = 77/171 (45.03%), Postives = 110/171 (64.33%), Query Frame = 1


Query: 9   GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGH 68
           G+T  LT  DAL +LK VKD+  +  EKYE FL +MKD   QR+D  GVI  VK LF+G+
Sbjct: 36  GTTGGLTTVDALTYLKAVKDMFQDNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGY 95

Query: 69  NDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIFNSFM 128
           +DL+LGFNTFLP+ Y I    EDE P   ++P+    A+++V+ +K RF G+   +  F+
Sbjct: 96  DDLLLGFNTFLPKGYKITLQPEDEKP---KKPVDFQVAIEFVNRIKARFGGDDRAYKKFL 155

Query: 129 RNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDP 180
             L++Y++  K +NE+++EV +L QDH DL+  F  FLP     + S NDP
Sbjct: 156 DILNMYRKETKSINEVYQEVTLLFQDHEDLLGEFVHFLP-DFRGSVSVNDP 202

[Close]

BLAST of CmoCh05G009350 vs. TAIR10
Match: AT3G01320.1 (AT3G01320.1 SIN3-like 1)

HSP 1 Score: 146.4 bits (368), Expect = 2.6e-35
Identity = 72/165 (43.64%), Postives = 109/165 (66.06%), Query Frame = 1


Query: 6   EADGSTR---KLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVK 65
           E  GS R   KLT  DAL +L+ VK++  ++ EKY+ FL++MKD   QR D  GVI  VK
Sbjct: 42  EEGGSRRVSQKLTTNDALSYLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVK 101

Query: 66  RLFRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFH 125
            LF+GHN+LI GFNTFLP+ Y I    ED+  P  ++ ++   A+++V+++K RF+ + H
Sbjct: 102 ELFKGHNNLIYGFNTFLPKGYEITLIEEDDALP--KKTVEFEQAINFVNKIKMRFKHDEH 161

Query: 126 IFNSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLP 168
           ++ SF+  L++Y++  K + E++ EV +L Q H DL+E F  FLP
Sbjct: 162 VYKSFLEILNMYRKENKEIKEVYNEVSILFQGHLDLLEQFTRFLP 204

[Close]

BLAST of CmoCh05G009350 vs. TAIR10
Match: AT5G15020.1 (AT5G15020.1 SIN3-like 2)

HSP 1 Score: 142.5 bits (358), Expect = 3.8e-34
Identity = 68/163 (41.72%), Postives = 110/163 (67.48%), Query Frame = 1


Query: 5   GEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRL 64
           GE   +T+KLT +DAL +LK VK++  ++ +KY+ FL++MKD   Q+ D  GVI+ VK L
Sbjct: 39  GEGGINTQKLTTDDALTYLKEVKEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKEL 98

Query: 65  FRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIF 124
           F+GHN+LI GFNTFLP+ + I   L+D   P  ++ ++  +A+ +V+++K RF+    ++
Sbjct: 99  FKGHNNLIFGFNTFLPKGFEIT--LDDVEAP-SKKTVEFEEAISFVNKIKTRFQHNELVY 158

Query: 125 NSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLP 168
            SF+  L++Y++  K + E++ EV  L +DH DL+E F  FLP
Sbjct: 159 KSFLEILNMYRKDNKDITEVYNEVSTLFEDHSDLLEEFTRFLP 198

[Close]

BLAST of CmoCh05G009350 vs. NCBI nr
Match: gi|778702996|ref|XP_011655296.1| (PREDICTED: paired amphipathic helix protein Sin3-like 4 isoform X1 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 1.9e-51
Identity = 94/169 (55.62%), Postives = 134/169 (79.29%), Query Frame = 1


Query: 9   GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGH 68
           GS +KLT  DALE+LKNVKD+  ++ EKYE+FL++MK+   QRID VGVI  VK+LF+GH
Sbjct: 35  GSLQKLTTNDALEYLKNVKDIFRDKKEKYEDFLEVMKEFKAQRIDTVGVIARVKQLFKGH 94

Query: 69  NDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIFNSFM 128
            DLILGFNTFLP+ YAI CPLEDETPP++++P++  +A+++V ++K RFEG+ H++ SF+
Sbjct: 95  RDLILGFNTFLPKGYAITCPLEDETPPQKKKPVQFEEAINFVGKIKTRFEGDNHVYKSFL 154

Query: 129 RNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN 178
             L+LY++  K ++E++REV  L+QDHPDL+  F  FLP  S TT++N+
Sbjct: 155 EILNLYRKENKSISEVYREVSALLQDHPDLLREFVHFLPDASATTSNNH 203

[Close]

BLAST of CmoCh05G009350 vs. NCBI nr
Match: gi|700196007|gb|KGN51184.1| (hypothetical protein Csa_5G484650 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 1.9e-51
Identity = 94/169 (55.62%), Postives = 134/169 (79.29%), Query Frame = 1


Query: 9   GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGH 68
           GS +KLT  DALE+LKNVKD+  ++ EKYE+FL++MK+   QRID VGVI  VK+LF+GH
Sbjct: 26  GSLQKLTTNDALEYLKNVKDIFRDKKEKYEDFLEVMKEFKAQRIDTVGVIARVKQLFKGH 85

Query: 69  NDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIFNSFM 128
            DLILGFNTFLP+ YAI CPLEDETPP++++P++  +A+++V ++K RFEG+ H++ SF+
Sbjct: 86  RDLILGFNTFLPKGYAITCPLEDETPPQKKKPVQFEEAINFVGKIKTRFEGDNHVYKSFL 145

Query: 129 RNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNN 178
             L+LY++  K ++E++REV  L+QDHPDL+  F  FLP  S TT++N+
Sbjct: 146 EILNLYRKENKSISEVYREVSALLQDHPDLLREFVHFLPDASATTSNNH 194

[Close]

BLAST of CmoCh05G009350 vs. NCBI nr
Match: gi|659131489|ref|XP_008465713.1| (PREDICTED: paired amphipathic helix protein Sin3-like 4 isoform X1 [Cucumis melo])

HSP 1 Score: 207.6 bits (527), Expect = 2.7e-50
Identity = 98/200 (49.00%), Postives = 142/200 (71.00%), Query Frame = 1


Query: 9   GSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRLFRGH 68
           GS +KLT  DALE+LKNVK +  +  EKYE+FL++MK+   QRID VGVI  VK+LF+GH
Sbjct: 35  GSLQKLTTNDALEYLKNVKTIFRDRKEKYEDFLEVMKEFKAQRIDTVGVIARVKQLFKGH 94

Query: 69  NDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIFNSFM 128
            DLILGFNTFLP+ YAI CPLEDETPP++++P++  +A+++V ++K RFEG+ H++ SF+
Sbjct: 95  RDLILGFNTFLPKGYAITCPLEDETPPQKKKPVQFEEAINFVGKIKTRFEGDNHVYKSFL 154

Query: 129 RNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIGVDRP 188
             L+LY++  K ++E++REV  L+QDHPDL+  F  FLP  S TT++N+       V R 
Sbjct: 155 EILNLYRKENKSISEVYREVSALLQDHPDLLREFVHFLPDASATTSNNHVSSMRNSVLRD 214

Query: 189 DEEGMSLIEKMNQKL-PEVD 208
               +  I++  + + P  D
Sbjct: 215 RNSSIPPIQQKERAMAPHAD 234

[Close]

BLAST of CmoCh05G009350 vs. NCBI nr
Match: gi|255558338|ref|XP_002520196.1| (PREDICTED: paired amphipathic helix protein Sin3-like 4 isoform X1 [Ricinus communis])

HSP 1 Score: 181.4 bits (459), Expect = 2.1e-42
Identity = 86/196 (43.88%), Postives = 131/196 (66.84%), Query Frame = 1


Query: 5   GEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRL 64
           G A G  +KLT  DAL +LK VKD+  ++ +KY++FL++MKD   QRID  GVI  VK L
Sbjct: 55  GGASGGGQKLTTNDALAYLKAVKDIFQDKRDKYDDFLEVMKDFKAQRIDTAGVIARVKDL 114

Query: 65  FRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIF 124
           F+GH DLILGFNTFLP+ Y I  PLEDE PP +++P++  +A+++V+++K RF+G+ H++
Sbjct: 115 FKGHRDLILGFNTFLPKGYEITLPLEDEQPP-QKKPVEFEEAINFVNKIKTRFQGDDHVY 174

Query: 125 NSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIG 184
            SF+  L++Y++  K + E+++EV  L QDH DL+  F  FLP  S T +++  P     
Sbjct: 175 KSFLDILNMYRKENKSITEVYQEVATLFQDHNDLLMEFTHFLPDSSATASAHYAPSVRNS 234

Query: 185 VDRPDEEGMSLIEKMN 201
           + R     M  + +M+
Sbjct: 235 IHRDRSSAMPTMRQMH 249

[Close]

BLAST of CmoCh05G009350 vs. NCBI nr
Match: gi|1000964302|ref|XP_015575286.1| (PREDICTED: paired amphipathic helix protein Sin3-like 4 isoform X2 [Ricinus communis])

HSP 1 Score: 181.4 bits (459), Expect = 2.1e-42
Identity = 86/196 (43.88%), Postives = 131/196 (66.84%), Query Frame = 1


Query: 5   GEADGSTRKLTAEDALEFLKNVKDVIGNEAEKYEEFLQLMKDLAFQRIDIVGVITGVKRL 64
           G A G  +KLT  DAL +LK VKD+  ++ +KY++FL++MKD   QRID  GVI  VK L
Sbjct: 55  GGASGGGQKLTTNDALAYLKAVKDIFQDKRDKYDDFLEVMKDFKAQRIDTAGVIARVKDL 114

Query: 65  FRGHNDLILGFNTFLPQRYAIACPLEDETPPRRRRPLKLGDALDYVSEVKRRFEGEFHIF 124
           F+GH DLILGFNTFLP+ Y I  PLEDE PP +++P++  +A+++V+++K RF+G+ H++
Sbjct: 115 FKGHRDLILGFNTFLPKGYEITLPLEDEQPP-QKKPVEFEEAINFVNKIKTRFQGDDHVY 174

Query: 125 NSFMRNLHLYKRGKKPLNELHREVCVLMQDHPDLVEGFADFLPCPSLTTTSNNDPEQNIG 184
            SF+  L++Y++  K + E+++EV  L QDH DL+  F  FLP  S T +++  P     
Sbjct: 175 KSFLDILNMYRKENKSITEVYQEVATLFQDHNDLLMEFTHFLPDSSATASAHYAPSVRNS 234

Query: 185 VDRPDEEGMSLIEKMN 201
           + R     M  + +M+
Sbjct: 235 IHRDRSSAMPTMRQMH 249

The following BLAST results are available for this feature:

BLAST of CmoCh05G009350 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SNL3_ARATH	4.0e-38	42.49	Paired amphipathic helix protein Sin3-like 3 OS=Arabidopsis thaliana GN=SNL3 PE=...	[more]
SNL4_ARATH	1.2e-37	42.86	Paired amphipathic helix protein Sin3-like 4 OS=Arabidopsis thaliana GN=SNL4 PE=...	[more]
SNL5_ARATH	2.1e-34	45.03	Paired amphipathic helix protein Sin3-like 5 OS=Arabidopsis thaliana GN=SNL5 PE=...	[more]
SNL1_ARATH	4.6e-34	43.64	Paired amphipathic helix protein Sin3-like 1 OS=Arabidopsis thaliana GN=SNL1 PE=...	[more]
SNL2_ARATH	6.7e-33	41.72	Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana GN=SNL2 PE=...	[more]

BLAST of CmoCh05G009350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQL9_CUCSA	1.3e-51	55.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G484650 PE=4 SV=1	[more]
B9S2H7_RICCO	1.4e-42	43.88	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0699610 PE=4 SV=1	[more]
V4TPJ6_9ROSI	9.4e-42	50.31	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030507mg PE=4 SV=1	[more]
V4TJI4_9ROSI	9.4e-42	50.31	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030507mg PE=4 SV=1	[more]
A0A067H4P8_CITSI	9.4e-42	50.31	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001681mg PE=4 SV=1	[more]

BLAST of CmoCh05G009350 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G24190.1	2.3e-39	42.49	SIN3-like 3	[more]
AT1G70060.1	6.6e-39	42.86	SIN3-like 4	[more]
AT1G59890.2	1.2e-35	45.03	SIN3-like 5	[more]
AT3G01320.1	2.6e-35	43.64	SIN3-like 1	[more]
AT5G15020.1	3.8e-34	41.72	SIN3-like 2	[more]

BLAST of CmoCh05G009350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778702996\|ref\|XP_011655296.1\|	1.9e-51	55.62	PREDICTED: paired amphipathic helix protein Sin3-like 4 isoform X1 [Cucumis sati...	[more]
gi\|700196007\|gb\|KGN51184.1\|	1.9e-51	55.62	hypothetical protein Csa_5G484650 [Cucumis sativus]	[more]
gi\|659131489\|ref\|XP_008465713.1\|	2.7e-50	49.00	PREDICTED: paired amphipathic helix protein Sin3-like 4 isoform X1 [Cucumis melo...	[more]
gi\|255558338\|ref\|XP_002520196.1\|	2.1e-42	43.88	PREDICTED: paired amphipathic helix protein Sin3-like 4 isoform X1 [Ricinus comm...	[more]
gi\|1000964302\|ref\|XP_015575286.1\|	2.1e-42	43.88	PREDICTED: paired amphipathic helix protein Sin3-like 4 isoform X2 [Ricinus comm...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003822	PAH

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G009350.1	CmoCh05G009350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003822	Paired amphipathic helix	GENE3D	G3DSA:1.20.1160.11		coord: 12..81 score: 3.2E-15coord: 98..167 score: 3.1
IPR003822	Paired amphipathic helix	PFAM	PF02671	PAH	coord: 123..166 score: 6.5E-9coord: 35..79 score: 1.5
IPR003822	Paired amphipathic helix	PROFILE	PS51477	PAH	coord: 12..82 score: 14.932coord: 99..169 score: 1
IPR003822	Paired amphipathic helix	unknown	SSF47762	PAH2 domain	coord: 98..167 score: 3.92E-18coord: 12..80 score: 1.83
None	No IPR available	PANTHER	PTHR12346	SIN3B-RELATED	coord: 3..202 score: 5.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G009350	Cucsa.275250	Cucumber (Gy14) v1	cgycmoB0764
CmoCh05G009350	CmaCh05G009120	Cucurbita maxima (Rimu)	cmacmoB788
CmoCh05G009350	Csa5G484650	Cucumber (Chinese Long) v2	cmocuB794
CmoCh05G009350	MELO3C002931	Melon (DHL92) v3.5.1	cmomeB705
CmoCh05G009350	ClCG09G022170	Watermelon (Charleston Gray)	cmowcgB689
CmoCh05G009350	CSPI05G16450	Wild cucumber (PI 183967)	cmocpiB798
CmoCh05G009350	Lsi02G017450	Bottle gourd (USVL1VR-Ls)	cmolsiB711
CmoCh05G009350	Cp4.1LG11g07470	Cucurbita pepo (Zucchini)	cmocpeB726
CmoCh05G009350	MELO3C002931.2	Melon (DHL92) v3.6.1	cmomedB802
CmoCh05G009350	CsaV3_5G025460	Cucumber (Chinese Long) v3	cmocucB0935
CmoCh05G009350	Cla97C09G183620	Watermelon (97103) v2	cmowmbB807
CmoCh05G009350	Bhi06G000672	Wax gourd	cmowgoB0922
CmoCh05G009350	CsGy5G016150	Cucumber (Gy14) v2	cgybcmoB673
CmoCh05G009350	Carg26442	Silver-seed gourd	carcmoB1425

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G009350	Cucurbita moschata (Rifu)	cmocmoB155
CmoCh05G009350	Cucurbita moschata (Rifu)	cmocmoB157
CmoCh05G009350	Cucurbita maxima (Rimu)	cmacmoB201
CmoCh05G009350	Cucurbita maxima (Rimu)	cmacmoB787
CmoCh05G009350	Cucurbita pepo (Zucchini)	cmocpeB721
CmoCh05G009350	Cucurbita pepo (Zucchini)	cmocpeB753
CmoCh05G009350	Silver-seed gourd	carcmoB0183