CmoCh05G009250 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G009250
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTransposon Ty1-BR Gag-Pol polyprotein
LocationCmo_Chr05 : 7231422 .. 7233299 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCCTTACCCGAGTCATGGGATACTGTTGTTGCCGCAATCAGCAGTTCCCGAGGATCTGATAAACTGAAGTTTGATGAAATTCGAGATGTAGTTCTCAGCGAAAGTATTCGCAAACGGGAAACTGGAGATTCATCAGGCAATGCTCTCAGTGTTGATCGAAGGGGAAGAAGCAAATCAAAGAGCTCAAACAAACATGGGCGTTCAAAATCAAAGAACCGGGGAAAATCTCCAAACAAACCCAACGTAACTTGTTGGAGCTGTGGGGCAAAAGGACACTTTCGGACAGATTGTACAAAACTAAAGAAGAAGCAGAATCATAAATCTGAAGATGATGATGATTCTATATACACAACAGAAGATGCTGAGGACGTTTTAATCCTTAGTGTGGATAGCCCAGCTGAATCCTGGATTTTGGATTCTTGTGCATCGTTCCATTCGTCTCCAAGTAAAGAATTGTTTCGGAATTTCAAATCAGGAAATTTCGGGAAGGTGTATCTTGCCGACAACAAAGCCTTGGAGATTGAAGGAAAGGGAGATGTCTCTATACAAACTCCAGCAGGAAATCTATGGACATTACAAGATGTCAGATACATTCCTAGTCTCAAGAAGAACCCGATCTCTATTGGTCAGTTGGATAGCACAGGCTATGCAACAGAGTTTGGAAAGAGTTCCTGGAAGATTGTGAAGGGCGCCATGGTTGTTGCGCGTGGCACAAAATCCGGAACCTTATACACTACTGCAGAGTGTATAAACATGACTGCTGCTGCTGAGAGTGCTTCCAATTCAAGTCTATGGCACAATAGACTTGGACATATGAGCGTCAAAGGAATGAAGATGCTGACTGCGAAAGGAGCTTTAGAAGGCTTAAAATCTGTTGATATGGGTCTTTGTGAGAGCTGCGTTATGGGCAAACAGAAACGAGTTAGTTTCACAAAGGCTGCCAGAGAACCGAAGAAAGTGCGGTTGGAAATGGTCCATACAGACGTCTGGGGACCATCTCCAGTTTCATCACTTGGTGGATCAAGGTACTACGTCACCTTCATCGATGACTTCAGCAGGAAGGTATGGGTTTACTTTCTGAAACACAAGTCAGATGTGTTTACCACCTTCAAGAAGTGGAAAGCTGAAGTTGAAAATCAGACCGGCTTGAAGATCAAATGCCTGAGGTCTGACAATGGAGGAGAGTACAACAAATCAGAGTTTATAACATTTTGTGCAGCTGAGGGAATTAGATTAATAAGAACAATTCCCGGTAAGGCAAGACAAAATGGTATTGTAGAAAGGATGAACAGAACATTGAATGAGCGAGGAAGAAGCATGAGGATTCATTCTGGATTGCCAAAGACATTCTGGGCTGATGCTGTGAACACAGCAGCATATTTGATTAATAGAGGGCCGTCAGTACCCTTGAAGTTCAAATTGCCCGAAGAAGTATGGACAGGAAAAGAACTCAAGTACTCTCACTTGAGAACCTTTGGCTGTACTGCATATGTTCATGTTGATCCAGAGAAGAGAGATAAGCTTGATGCTAAGGCTGTGAAATGCTACTTCATAGGCTATGGCTCTGACATGTTCGGGTATAGGTTTTGGGATGAGAAAAATATGAAGATCCTAAGACACTGTGATGTGACCTTTGATGAAAATGTCATGTACAAGGATAGAGAGAAGATAAACTCTAAGACTACGAAGCAAGTGGGAGTTGAACTTGAGTGGCAAGAAAATTCACGCAGTGATAGTACAACAGAAGCAAAAGAAACTCCTGATCCTATTGCTGAAGAACCAGACGTGGAGCAAGTAGCACCTGAGCAGGTGTTGAGAAGATCATCCAGAACTACCAGAGCACCAGATAGATATTCAACCTCTAGCACCTGA

mRNA sequence

ATGTCATCCTTACCCGAGTCATGGGATACTGTTGTTGCCGCAATCAGCAGTTCCCGAGGATCTGATAAACTGAAGTTTGATGAAATTCGAGATGTAGTTCTCAGCGAAAGTATTCGCAAACGGGAAACTGGAGATTCATCAGGCAATGCTCTCAGTGTTGATCGAAGGGGAAGAAGCAAATCAAAGAGCTCAAACAAACATGGGCGTTCAAAATCAAAGAACCGGGGAAAATCTCCAAACAAACCCAACGTAACTTGTTGGAGCTGTGGGGCAAAAGGACACTTTCGGACAGATTGTACAAAACTAAAGAAGAAGCAGAATCATAAATCTGAAGATGATGATGATTCTATATACACAACAGAAGATGCTGAGGACGTTTTAATCCTTAGTGTGGATAGCCCAGCTGAATCCTGGATTTTGGATTCTTGTGCATCGTTCCATTCGTCTCCAAGTAAAGAATTGTTTCGGAATTTCAAATCAGGAAATTTCGGGAAGGTGTATCTTGCCGACAACAAAGCCTTGGAGATTGAAGGAAAGGGAGATGTCTCTATACAAACTCCAGCAGGAAATCTATGGACATTACAAGATGTCAGATACATTCCTAGTCTCAAGAAGAACCCGATCTCTATTGGTCAGTTGGATAGCACAGGCTATGCAACAGAGTTTGGAAAGAGTTCCTGGAAGATTGTGAAGGGCGCCATGGTTGTTGCGCGTGGCACAAAATCCGGAACCTTATACACTACTGCAGAGTGTATAAACATGACTGCTGCTGCTGAGAGTGCTTCCAATTCAAGTCTATGGCACAATAGACTTGGACATATGAGCGTCAAAGGAATGAAGATGCTGACTGCGAAAGGAGCTTTAGAAGGCTTAAAATCTGTTGATATGGGTCTTTGTGAGAGCTGCGTTATGGGCAAACAGAAACGAGTTAGTTTCACAAAGGCTGCCAGAGAACCGAAGAAAGTGCGGTTGGAAATGGTCCATACAGACGTCTGGGGACCATCTCCAGTTTCATCACTTGGTGGATCAAGGTACTACGTCACCTTCATCGATGACTTCAGCAGGAAGGTATGGGTTTACTTTCTGAAACACAAGTCAGATGTGTTTACCACCTTCAAGAAGTGGAAAGCTGAAGTTGAAAATCAGACCGGCTTGAAGATCAAATGCCTGAGGTCTGACAATGGAGGAGAGTACAACAAATCAGAGTTTATAACATTTTGTGCAGCTGAGGGAATTAGATTAATAAGAACAATTCCCGGTAAGGCAAGACAAAATGGTATTGTAGAAAGGATGAACAGAACATTGAATGAGCGAGGAAGAAGCATGAGGATTCATTCTGGATTGCCAAAGACATTCTGGGCTGATGCTGTGAACACAGCAGCATATTTGATTAATAGAGGGCCGTCAGTACCCTTGAAGTTCAAATTGCCCGAAGAAGTATGGACAGGAAAAGAACTCAAGTACTCTCACTTGAGAACCTTTGGCTGTACTGCATATGTTCATGTTGATCCAGAGAAGAGAGATAAGCTTGATGCTAAGGCTGTGAAATGCTACTTCATAGGCTATGGCTCTGACATGTTCGGGTATAGGTTTTGGGATGAGAAAAATATGAAGATCCTAAGACACTGTGATGTGACCTTTGATGAAAATGTCATGTACAAGGATAGAGAGAAGATAAACTCTAAGACTACGAAGCAAGTGGGAGTTGAACTTGAGTGGCAAGAAAATTCACGCAGTGATAGTACAACAGAAGCAAAAGAAACTCCTGATCCTATTGCTGAAGAACCAGACGTGGAGCAAGTAGCACCTGAGCAGGTGTTGAGAAGATCATCCAGAACTACCAGAGCACCAGATAGATATTCAACCTCTAGCACCTGA

Coding sequence (CDS)

ATGTCATCCTTACCCGAGTCATGGGATACTGTTGTTGCCGCAATCAGCAGTTCCCGAGGATCTGATAAACTGAAGTTTGATGAAATTCGAGATGTAGTTCTCAGCGAAAGTATTCGCAAACGGGAAACTGGAGATTCATCAGGCAATGCTCTCAGTGTTGATCGAAGGGGAAGAAGCAAATCAAAGAGCTCAAACAAACATGGGCGTTCAAAATCAAAGAACCGGGGAAAATCTCCAAACAAACCCAACGTAACTTGTTGGAGCTGTGGGGCAAAAGGACACTTTCGGACAGATTGTACAAAACTAAAGAAGAAGCAGAATCATAAATCTGAAGATGATGATGATTCTATATACACAACAGAAGATGCTGAGGACGTTTTAATCCTTAGTGTGGATAGCCCAGCTGAATCCTGGATTTTGGATTCTTGTGCATCGTTCCATTCGTCTCCAAGTAAAGAATTGTTTCGGAATTTCAAATCAGGAAATTTCGGGAAGGTGTATCTTGCCGACAACAAAGCCTTGGAGATTGAAGGAAAGGGAGATGTCTCTATACAAACTCCAGCAGGAAATCTATGGACATTACAAGATGTCAGATACATTCCTAGTCTCAAGAAGAACCCGATCTCTATTGGTCAGTTGGATAGCACAGGCTATGCAACAGAGTTTGGAAAGAGTTCCTGGAAGATTGTGAAGGGCGCCATGGTTGTTGCGCGTGGCACAAAATCCGGAACCTTATACACTACTGCAGAGTGTATAAACATGACTGCTGCTGCTGAGAGTGCTTCCAATTCAAGTCTATGGCACAATAGACTTGGACATATGAGCGTCAAAGGAATGAAGATGCTGACTGCGAAAGGAGCTTTAGAAGGCTTAAAATCTGTTGATATGGGTCTTTGTGAGAGCTGCGTTATGGGCAAACAGAAACGAGTTAGTTTCACAAAGGCTGCCAGAGAACCGAAGAAAGTGCGGTTGGAAATGGTCCATACAGACGTCTGGGGACCATCTCCAGTTTCATCACTTGGTGGATCAAGGTACTACGTCACCTTCATCGATGACTTCAGCAGGAAGGTATGGGTTTACTTTCTGAAACACAAGTCAGATGTGTTTACCACCTTCAAGAAGTGGAAAGCTGAAGTTGAAAATCAGACCGGCTTGAAGATCAAATGCCTGAGGTCTGACAATGGAGGAGAGTACAACAAATCAGAGTTTATAACATTTTGTGCAGCTGAGGGAATTAGATTAATAAGAACAATTCCCGGTAAGGCAAGACAAAATGGTATTGTAGAAAGGATGAACAGAACATTGAATGAGCGAGGAAGAAGCATGAGGATTCATTCTGGATTGCCAAAGACATTCTGGGCTGATGCTGTGAACACAGCAGCATATTTGATTAATAGAGGGCCGTCAGTACCCTTGAAGTTCAAATTGCCCGAAGAAGTATGGACAGGAAAAGAACTCAAGTACTCTCACTTGAGAACCTTTGGCTGTACTGCATATGTTCATGTTGATCCAGAGAAGAGAGATAAGCTTGATGCTAAGGCTGTGAAATGCTACTTCATAGGCTATGGCTCTGACATGTTCGGGTATAGGTTTTGGGATGAGAAAAATATGAAGATCCTAAGACACTGTGATGTGACCTTTGATGAAAATGTCATGTACAAGGATAGAGAGAAGATAAACTCTAAGACTACGAAGCAAGTGGGAGTTGAACTTGAGTGGCAAGAAAATTCACGCAGTGATAGTACAACAGAAGCAAAAGAAACTCCTGATCCTATTGCTGAAGAACCAGACGTGGAGCAAGTAGCACCTGAGCAGGTGTTGAGAAGATCATCCAGAACTACCAGAGCACCAGATAGATATTCAACCTCTAGCACCTGA
Homology
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BLAST of CmoCh05G009250 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 7.5e-128
Identity = 251/608 (41.28%), Postives = 376/608 (61.84%), Query Frame = 1 

Query: 1   MSSLPESWDTVVAAISSSRGSDKLKFDEIRDVVLSESIRKRETGDSSGNALSVDRRGRSK 60
           ++SLP S+D +   I   + + +LK D    ++L+E +RK+   ++ G AL  + RGRS 
Sbjct: 149 LNSLPSSYDNLATTILHGKTTIELK-DVTSALLLNEKMRKKP--ENQGQALITEGRGRSY 208

Query: 61  SKSSNKHGRSKSKNRGKSPNKPNV-TCWSCGAKGHFRTDCTKLKKKQNHKS--EDDDDSI 120
            +SSN +GRS ++ + K+ +K  V  C++C   GHF+ DC   +K +   S  ++DD++ 
Sbjct: 209 QRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTA 268

Query: 121 YTTEDAEDVLI--------LSVDSPAESWILDSCASFHSSPSKELFRNFKSGNFGKVYLA 180
              ++ ++V++        + +  P   W++D+ AS H++P ++LF  + +G+FG V + 
Sbjct: 269 AMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMG 328

Query: 181 DNKALEIEGKGDVSIQTPAGNLWTLQDVRYIPSLKKNPISIGQLDSTGYATEFGKSSWKI 240
           +    +I G GD+ I+T  G    L+DVR++P L+ N IS   LD  GY + F    W++
Sbjct: 329 NTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRL 388

Query: 241 VKGAMVVARGTKSGTLY-TTAE-CINMTAAAESASNSSLWHNRLGHMSVKGMKMLTAKGA 300
            KG++V+A+G   GTLY T AE C     AA+   +  LWH R+GHMS KG+++L  K  
Sbjct: 389 TKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSL 448

Query: 301 LEGLKSVDMGLCESCVMGKQKRVSFTKAAREPKKVRLEMVHTDVWGPSPVSSLGGSRYYV 360
           +   K   +  C+ C+ GKQ RVSF + + E K   L++V++DV GP  + S+GG++Y+V
Sbjct: 449 ISYAKGTTVKPCDYCLFGKQHRVSF-QTSSERKLNILDLVYSDVCGPMEIESMGGNKYFV 508

Query: 361 TFIDDFSRKVWVYFLKHKSDVFTTFKKWKAEVENQTGLKIKCLRSDNGGEYNKSEFITFC 420
           TFIDD SRK+WVY LK K  VF  F+K+ A VE +TG K+K LRSDNGGEY   EF  +C
Sbjct: 509 TFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYC 568

Query: 421 AAEGIRLIRTIPGKARQNGIVERMNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINRG 480
           ++ GIR  +T+PG  + NG+ ERMNRT+ E+ RSM   + LPK+FW +AV TA YLINR 
Sbjct: 569 SSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRS 628

Query: 481 PSVPLKFKLPEEVWTGKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCYFIGYGSDMF 540
           PSVPL F++PE VWT KE+ YSHL+ FGC A+ HV  E+R KLD K++ C FIGYG + F
Sbjct: 629 PSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEF 688

Query: 541 GYRFWDEKNMKILRHCDVTFDENVMYKDREKINSKTTKQVGVELEWQENSRSDSTTEAKE 596
           GYR WD    K++R  DV F E+ +    +   S+  K   +       S S++ T A+ 
Sbjct: 689 GYRLWDPVKKKVIRSRDVVFRESEVRTAADM--SEKVKNGIIPNFVTIPSTSNNPTSAES 748

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BLAST of CmoCh05G009250 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 243.0 bits (619), Expect = 8.4e-63
Identity = 178/578 (30.80%), Postives = 287/578 (49.65%), Query Frame = 1 

Query: 3   SLPESWDTVVAAISSSRGSDKLKFDEIRDVVLSESIR-KRETGDSSGNALSVDRRGRSKS 62
           +LP  +D ++ AI +    + L    +++ +L + I+ K +  D+S   ++      + +
Sbjct: 147 TLPSCYDGIITAIETL-SEENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNT 206

Query: 63  KSSN--KHGRSKSKNRGKSPNKPNVTCWSCGAKGHFRTDCTKLKKKQNHKSEDDDDSIYT 122
             +N  K+  +K K   K  +K  V C  CG +GH + DC   K+  N+K+++++  + T
Sbjct: 207 YKNNLFKNRVTKPKKIFKGNSKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQT 266

Query: 123 -TEDAEDVLILSVDSPAESWILDSCASFHSSPSKELFRNFKSGNFGKVYLADNKALEIEG 182
            T      ++  V++ +   ++D+C     S + +   N +S     V +     + +  
Sbjct: 267 ATSHGIAFMVKEVNNTS---VMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAK 326

Query: 183 KGDVSIQTPAGNLW-------TLQDVRYIPSLKKNPISIGQLDSTGYATEFGKSSWKIVK 242
           +G+    T  G +        TL+DV +      N +S+ +L   G + EF KS   I K
Sbjct: 327 QGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISK 386

Query: 243 GAMVVARGTKSGTLYTTAECINMTAAAESA---SNSSLWHNRLGHMS------VKGMKML 302
             ++V    K+  +      IN  A + +A   +N  LWH R GH+S      +K   M 
Sbjct: 387 NGLMVV---KNSGMLNNVPVINFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMF 446

Query: 303 TAKGALEGLKSVDMGLCESCVMGKQKRVSFTKAAREPKKVR--LEMVHTDVWGPSPVSSL 362
           + +  L  L+ +   +CE C+ GKQ R+ F K  ++   ++  L +VH+DV GP    +L
Sbjct: 447 SDQSLLNNLE-LSCEICEPCLNGKQARLPF-KQLKDKTHIKRPLFVVHSDVCGPITPVTL 506

Query: 363 GGSRYYVTFIDDFSRKVWVYFLKHKSDVFTTFKKWKAEVENQTGLKIKCLRSDNGGEYNK 422
               Y+V F+D F+     Y +K+KSDVF+ F+ + A+ E    LK+  L  DNG EY  
Sbjct: 507 DDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLS 566

Query: 423 SEFITFCAAEGIRLIRTIPGKARQNGIVERMNRTLNERGRSMRIHSGLPKTFWADAVNTA 482
           +E   FC  +GI    T+P   + NG+ ERM RT+ E+ R+M   + L K+FW +AV TA
Sbjct: 567 NEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTA 626

Query: 483 AYLINRGPSVPL--KFKLPEEVWTGKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCY 542
            YLINR PS  L    K P E+W  K+    HLR FG T YVH+   K+ K D K+ K  
Sbjct: 627 TYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHI-KNKQGKFDDKSFKSI 686

Query: 543 FIGYGSDMFGYRFWDEKNMKILRHCDVTFDENVMYKDR 557
           F+GY  +  G++ WD  N K +   DV  DE  M   R
Sbjct: 687 FVGYEPN--GFKLWDAVNEKFIVARDVVVDETNMVNSR 712

[Close]
BLAST of CmoCh05G009250 vs. Swiss-Prot
Match: M710_ARATH (Uncharacterized mitochondrial protein AtMg00710 OS=Arabidopsis thaliana GN=AtMg00710 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 9.1e-17
Identity = 41/76 (53.95%), Postives = 51/76 (67.11%), Query Frame = 1 

Query: 431 MNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINRGPSVPLKFKLPEEVWTGKELKYSH 490
           MNRT+ E+ RSM    GLPKTF ADA NTA ++IN+ PS  + F +P+EVW      YS+
Sbjct: 1   MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60

Query: 491 LRTFGCTAYVHVDPEK 507
           LR FGC AY+H D  K
Sbjct: 61  LRRFGCVAYIHCDEGK 76

[Close]
BLAST of CmoCh05G009250 vs. Swiss-Prot
Match: YG21B_YEAST (Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY2B-GR1 PE=5 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 2.7e-16
Identity = 136/651 (20.89%), Postives = 264/651 (40.55%), Query Frame = 1 

Query: 23  KLKFDEIRDVVLSESIRKRETGDSSGNALSVDRRGRSKSKSSNKHGRSKSKNRG-KSPNK 82
           +L +DE + + L++  + ++  +    + +      +K  + N H  + SK R  K+ N 
Sbjct: 340 QLIYDENKIMNLNKPSQYKQHSEYKNVSRTSPNTTNTKVTTRNYHRTNSSKPRAAKAHNI 399

Query: 83  PNVTCWSCGAKGH---------FRTDCTKLKKKQNHKSEDDDDSIYTTEDAEDVLILSVD 142
              + +S     H         + +D  +L   Q  K      +I + ++  D L+  +D
Sbjct: 400 ATSSKFSRVNNDHINESTVSSQYLSDDDELSLGQQQKESKPTHTIDSNDELPDHLL--ID 459

Query: 143 SPAESWILDSCASFH-SSPSKELFRNFKSGNFGKVYLADNKALEIEGKGDVSIQTPAGNL 202
           S A   ++ S    H ++P+ E+           +  A  + + I   G++      G  
Sbjct: 460 SGASQTLVRSAHYLHHATPNSEI----------NIVDAQKQDIPINAIGNLHFNFQNGTK 519

Query: 203 WTLQDVRYIPSLKKNPISIGQLDSTGYATEFGKSSWKIVKGAMVVARGTKSGTLYTTAE- 262
            +++ + + P++  + +S+ +L +      F +++ +   G  V+A   K G  Y  ++ 
Sbjct: 520 TSIKAL-HTPNIAYDLLSLSELANQNITACFTRNTLERSDGT-VLAPIVKHGDFYWLSKK 579

Query: 263 ----------CINMTAAAESASNSS--LWHNRLGHMSVKGMKMLTAKGALEGLKSVDMGL 322
                      IN    ++S +     L H  LGH + + ++    K A+  LK  D+  
Sbjct: 580 YLIPSHISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEW 639

Query: 323 -------CESCVMGKQKRVSFTKAAR---EPKKVRLEMVHTDVWGPSPVSSLGGSRYYVT 382
                  C  C++GK  +    K +R   +      + +HTD++GP          Y+++
Sbjct: 640 SNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFIS 699

Query: 383 FIDDFSRKVWVYFL--KHKSDVFTTFKKWKAEVENQTGLKIKCLRSDNGGEYNKSEFITF 442
           F D+ +R  WVY L  + +  +   F    A ++NQ   ++  ++ D G EY       F
Sbjct: 700 FTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKF 759

Query: 443 CAAEGIRLIRTIPGKARQNGIVERMNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINR 502
               GI    T    +R +G+ ER+NRTL    R++   SGLP   W  AV  +  + N 
Sbjct: 760 FTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNS 819

Query: 503 GPSVPLKFKLPEEVWTGKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCYFIGYGSDM 562
             S P K K   +      L  + +  FG    V+ +     K+  + +  Y +    + 
Sbjct: 820 LVS-PKKRKSARQHAGLAGLDITTILPFGQPVIVN-NHNPDSKIHPRGIPGYALHPSRNS 879

Query: 563 FGYRFW--------DEKNMKILR----------HCDVTFDENVMYKDREKINSKTTKQVG 618
           +GY  +        D  N  IL+          +  +TFD+++        N    +Q  
Sbjct: 880 YGYIIYLPSLKKTVDTTNYVILQNKQTKLDQFDYDTLTFDDDLNRLTAH--NQSFIEQNE 939

[Close]
BLAST of CmoCh05G009250 vs. Swiss-Prot
Match: YA11B_YEAST (Truncated transposon Ty1-A Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY1B-A PE=3 SV=3)

HSP 1 Score: 87.8 bits (216), Expect = 4.5e-16
Identity = 62/239 (25.94%), Postives = 102/239 (42.68%), Query Frame = 1 

Query: 299 CESCVMGKQKRVSFTKAAR---EPKKVRLEMVHTDVWGPSPVSSLGGSRYYVTFIDDFSR 358
           C  C++GK  +    K +R   +      + +HTD++GP          Y+++F D+ ++
Sbjct: 78  CPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTK 137

Query: 359 KVWVYFLKHKS-----DVFTTFKKWKAEVENQTGLKIKCLRSDNGGEYNKSEFITFCAAE 418
             WVY L  +      DVFTT     A ++NQ    +  ++ D G EY       F    
Sbjct: 138 LRWVYPLHDRREDSILDVFTTIL---AFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKN 197

Query: 419 GIRLIRTIPGKARQNGIVERMNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINRGPSV 478
           GI    T    +R +G+ ER+NRTL +  R+    SGLP   W  A+  +  ++    + 
Sbjct: 198 GITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFST-IVRNSLAS 257

Query: 479 PLKFKLPEEVWTGKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCYFIGYGSDMFGY 530
           P   K   +      L  S L  FG    V+ D     K+  + +  Y +    + +GY
Sbjct: 258 PKSKKSARQHAGLAGLDISTLLPFGQPVIVN-DHNPNSKIHPRGIPGYALHPSRNSYGY 311

[Close]
BLAST of CmoCh05G009250 vs. TrEMBL
Match: A0A151TNK0_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_022239 PE=4 SV=1)

HSP 1 Score: 725.7 bits (1872), Expect = 4.8e-206
Identity = 361/631 (57.21%), Postives = 465/631 (73.69%), Query Frame = 1 

Query: 1   MSSLPESWDTVVAAISSSRGSDKLKFDEIRDVVLSESIRKRETGD----SSGNALSVDRR 60
           +SSLPESW   V A+SSS   +KLK ++IRD++LSE +R+R++ +    +S +AL+ + R
Sbjct: 126 LSSLPESWAATVTAVSSSARDNKLKLNDIRDLILSEDVRRRDSEEPSSSTSSSALNTESR 185

Query: 61  GRSKSKSSNKHGRSKSKNRGKSPNKPNVTCWSCGAKGHFRTDCTKLKKKQNHKSEDDDDS 120
           GR+  K  N  GRSKS+ +G+   + ++ CW+C  +GHF   C   KK +NHK  DDD+S
Sbjct: 186 GRTTQKGYNSRGRSKSRAKGQPKFRNDIVCWNCDKRGHFTNQCKAPKKNKNHKKRDDDES 245

Query: 121 IYT-TEDAEDVLILSVDSPAESWILDSCASFHSSPSKELFRNFKSGNFGKVYLADNKALE 180
               T++ +D LI S+DSP ESWI+DS ASFH++PS EL  N+ SG FGKVYLAD K L 
Sbjct: 246 ANAATDEIDDALICSLDSPIESWIMDSGASFHTTPSNELLTNYVSGRFGKVYLADGKPLN 305

Query: 181 IEGKGDVSIQTPAGNLWTLQDVRYIPSLKKNPISIGQLDSTGYATEFGKSSWKIVKGAMV 240
           I GKGD++I+T +G+ WTL++VR+IP+LK+N IS+GQLD  G+ T FG  +WK+ KG ++
Sbjct: 306 IVGKGDIAIRTSSGSHWTLKNVRHIPALKRNLISVGQLDDEGHETTFGDGAWKVKKGNLI 365

Query: 241 VARGTKSGTLYTTAECINMTAAAESASNSSLWHNRLGHMSVKGMKMLTAKGALEGLKSVD 300
           VARG K G+LY  A+  NM A  E+A+NS LWH RLGHMS KGMK++  KG L  LK VD
Sbjct: 366 VARGKKRGSLYMVAD-ENMIAVTEAANNSFLWHQRLGHMSEKGMKLMATKGKLSKLKHVD 425

Query: 301 MGLCESCVMGKQKRVSFTKAAREPKKVRLEMVHTDVWGPSPVSSLGGSRYYVTFIDDFSR 360
           +G CE C++GKQ+++SF++  +  K  RLE+VHTDVWGP+PV SLGGS YYVTFIDD +R
Sbjct: 426 VGTCEHCILGKQRKISFSRQGKTLKTERLELVHTDVWGPAPVKSLGGSCYYVTFIDDATR 485

Query: 361 KVWVYFLKHKSDVFTTFKKWKAEVENQTGLKIKCLRSDNGGEYNKSEFITFCAAEGIRLI 420
           KVWVYFLK+KSDVF+ FK+WK EVENQTGLK+K L+SDNGGEYN  EF  FC+  GIR+I
Sbjct: 486 KVWVYFLKNKSDVFSVFKRWKTEVENQTGLKLKSLKSDNGGEYNSHEFKNFCSEHGIRMI 545

Query: 421 RTIPGKARQNGIVERMNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINRGPSVPLKFK 480
           +TIPG   QNG+ ERMNRTLNER R MRI SGLPK FWADA+NTAAYLINRGPSVPL ++
Sbjct: 546 KTIPGTPEQNGVAERMNRTLNERARCMRIQSGLPKVFWADAINTAAYLINRGPSVPLGYQ 605

Query: 481 LPEEVWTGKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCYFIGYGSDMFGYRFWDEK 540
           LPEEVW+GKE+  SHLR FGC +YV +D + RDKLD KA KCYFIGYGSDM+GYRFWD++
Sbjct: 606 LPEEVWSGKEVNLSHLRVFGCVSYVLIDSDSRDKLDPKAKKCYFIGYGSDMYGYRFWDDQ 665

Query: 541 NMKILRHCDVTFDENVMYKDR---EKINSKTTKQVGVELEWQENSRSDSTTEAKETPDPI 600
           N KI+R  +VTF+EN+ YKDR   E I++    +   ++E +E S SD T  ++ T   +
Sbjct: 666 NKKIIRSRNVTFNENLFYKDRFSAESIDTDKLPEPSEKVELEEISESDITNRSQSTDIEV 725

Query: 601 AEEPDVEQVAPEQVLRRSSRTTRAPDRYSTS 624
             EP          LRRS R + AP+RYS S
Sbjct: 726 ESEP------ASPPLRRSCRVSVAPERYSPS 749

[Close]
BLAST of CmoCh05G009250 vs. TrEMBL
Match: A5CBM1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001479 PE=4 SV=1)

HSP 1 Score: 710.7 bits (1833), Expect = 1.6e-201
Identity = 348/627 (55.50%), Postives = 468/627 (74.64%), Query Frame = 1 

Query: 1   MSSLPESWDTVVAAISSSRGSDKLKFDEIRDVVLSESIRKRETGDSSGN--ALSVDRRGR 60
           ++SLP SW+ +  A+S+S G +KLK+++IRD++L+E IR+R+ G++SG+  AL+++ RGR
Sbjct: 121 LASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNLETRGR 180

Query: 61  SKSKSSNK---HGRSKSKNRGKSPNKPNVTCWSCGAKGHFRTDCTKLKKKQNHKSEDDDD 120
             +++SN+   + R+ ++NR KS +   V CW+CG  GHF+  C   KKK      +DD 
Sbjct: 181 GNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKN-----EDDS 240

Query: 121 SIYTTEDAEDVLILSVDSPAESWILDSCASFHSSPSKELFRNFKSGNFGKVYLADNKALE 180
           +   TE+ +D L+L+VDSP + W+LDS ASFH++P +E+ +N+ +G+FGKVYLAD  AL+
Sbjct: 241 ANAVTEEVQDALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALD 300

Query: 181 IEGKGDVSIQTPAGNLWTLQDVRYIPSLKKNPISIGQLDSTGYATEFGKSSWKIVKGAMV 240
           + G GDV I  P G++W L+ VR+IP L++N IS+GQLD  G+A  F   +WK+ KGA V
Sbjct: 301 VVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARV 360

Query: 241 VARGTKSGTLYTTAECINMTAAAESASNSSLWHNRLGHMSVKGMKMLTAKGALEGLKSVD 300
           +ARG K+GTLY T+   +  A A++++++SLWH RLGHMS KGMKML +KG L  LKS+D
Sbjct: 361 LARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHMSEKGMKMLLSKGKLPELKSID 420

Query: 301 MGLCESCVMGKQKRVSFTKAAREPKKVRLEMVHTDVWGPSPVSSLGGSRYYVTFIDDFSR 360
             +CESC++GKQK+VSF K  R PK  +LE+VHTD+WGPSPV+SLGGSRYY+TFIDD SR
Sbjct: 421 FDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSSR 480

Query: 361 KVWVYFLKHKSDVFTTFKKWKAEVENQTGLKIKCLRSDNGGEYNKSEFITFCAAEGIRLI 420
           KVWVYFLK+KSDVF TFKKWK  VE +TGLK+KCLRSDNGGEY    F  +CAA+GIR+ 
Sbjct: 481 KVWVYFLKNKSDVFVTFKKWKXMVETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRME 540

Query: 421 RTIPGKARQNGIVERMNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINRGPSVPLKFK 480
           +TIPG  +QNG+ ERMNRTLNER RSMR+H+GLPKTFWADAV+TAAYLINRGPSVP++F+
Sbjct: 541 KTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFR 600

Query: 481 LPEEVWTGKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCYFIGYGSDMFGYRFWDEK 540
           LPEEVW+GKE+K+SHL+ FGC +YVH+D + R KLDAK+  C+FIGYG + FGYRFWDE+
Sbjct: 601 LPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYGDEKFGYRFWDEQ 660

Query: 541 NMKILRHCDVTFDENVMYKDREKINSKTTKQVGVELEWQE-NSRSDSTTEAKETPDPIAE 600
           N KI+R  +V F+E VMYKDR  + S  T+    + E+   +  ++ST +     D    
Sbjct: 661 NRKIIRSRNVIFNEQVMYKDRSTVTSDVTEIDQKKSEFVNLDELTESTVQKGGEEDKENV 720

Query: 601 EPDVEQVAPEQVLRRSSRTTRAPDRYS 622
              V+   P   +RRSSR TR P RYS
Sbjct: 721 NSQVDLSTPVVEVRRSSRNTRPPQRYS 742

[Close]
BLAST of CmoCh05G009250 vs. TrEMBL
Match: A5AS37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032634 PE=4 SV=1)

HSP 1 Score: 709.9 bits (1831), Expect = 2.7e-201
Identity = 351/628 (55.89%), Postives = 467/628 (74.36%), Query Frame = 1 

Query: 1   MSSLPESWDTVVAAISSSRGSDKLKFDEIRDVVLSESIRKRETGDSSGN--ALSVDRRGR 60
           ++SLP SW+ +  A+S+S G +KLK+++IRD++L+E IR+R+ G++SG+  AL+++ RGR
Sbjct: 149 LASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNLETRGR 208

Query: 61  SKSKSSNKHGRSKSKN----RGKSPNKPNVTCWSCGAKGHFRTDCTKLKKKQNHKSEDDD 120
             +++SN HGRS S+N    R KS +   V CW+CG  GHF+  C   KKK      +DD
Sbjct: 209 GNNRNSN-HGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKN-----EDD 268

Query: 121 DSIYTTEDAEDVLILSVDSPAESWILDSCASFHSSPSKELFRNFKSGNFGKVYLADNKAL 180
            +   TE+  D L+L+VDSP + W+LDS ASFH++P +E+ +N+ +G+FGKVYLAD  AL
Sbjct: 269 SANAVTEEVXDALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSAL 328

Query: 181 EIEGKGDVSIQTPAGNLWTLQDVRYIPSLKKNPISIGQLDSTGYATEFGKSSWKIVKGAM 240
           ++ G GDV I  P G++W L+ VR+IP L++N IS+GQLD  G+A  F   +WK+ KG  
Sbjct: 329 DVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGVR 388

Query: 241 VVARGTKSGTLYTTAECINMTAAAESASNSSLWHNRLGHMSVKGMKMLTAKGALEGLKSV 300
           V+ARG K+GTLY T+   +  A A++++++SLWH RLGHMS KGMKML +KG L  LKS+
Sbjct: 389 VLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHMSEKGMKMLLSKGKLPELKSI 448

Query: 301 DMGLCESCVMGKQKRVSFTKAAREPKKVRLEMVHTDVWGPSPVSSLGGSRYYVTFIDDFS 360
           D  +CESC++GKQK+VSF K  R PK  +LE+VHTD+WGPSPV+SLGGSRYY+TFIDD S
Sbjct: 449 DFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSS 508

Query: 361 RKVWVYFLKHKSDVFTTFKKWKAEVENQTGLKIKCLRSDNGGEYNKSEFITFCAAEGIRL 420
           RKVWVYFLK+KSDVF TFKKWKA VE +TGLK+KCLRSDNGGEY    F  +CAA+GIR+
Sbjct: 509 RKVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRM 568

Query: 421 IRTIPGKARQNGIVERMNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINRGPSVPLKF 480
            +TIPG  +QNG+ ERMNRTLNER RSMR+H+GLPKTFWADAV+TAAYLINRGPSVP++F
Sbjct: 569 EKTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEF 628

Query: 481 KLPEEVWTGKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCYFIGYGSDMFGYRFWDE 540
           +LPEEVW+GKE+K+SHL+ FGC +YVH+D + R KLDAK+  C+FIGYG + FGYRFWDE
Sbjct: 629 RLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYGDEKFGYRFWDE 688

Query: 541 KNMKILRHCDVTFDENVMYKDREKINSKTTKQVGVELEWQE-NSRSDSTTEAKETPDPIA 600
           +N KI+R  +V F+E VMYKDR  + S  T+    + E+   +  ++ST + +   D   
Sbjct: 689 QNRKIIRSRNVIFNEQVMYKDRLTVTSXVTEIDQKKSEFVNLDELTESTVQKRGEEDKEN 748

Query: 601 EEPDVEQVAPEQVLRRSSRTTRAPDRYS 622
               V+   P   +RRSSR  R P RYS
Sbjct: 749 VNSKVDLRTPVVEVRRSSRNIRPPQRYS 770

[Close]
BLAST of CmoCh05G009250 vs. TrEMBL
Match: A5BFU1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022356 PE=4 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 1.9e-194
Identity = 339/627 (54.07%), Postives = 460/627 (73.37%), Query Frame = 1 

Query: 1   MSSLPESWDTVVAAISSSRGSDKLKFDEIRDVVLSESIRKRETGDSSGN--ALSVDRRGR 60
           ++SL  SW+ +  A+S+S G +KLK+++IRD++L+E IR+R+ G++SG+  AL+++ RG+
Sbjct: 149 LASLLNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGSSSALNLETRGK 208

Query: 61  SKSKSSNK---HGRSKSKNRGKSPNKPNVTCWSCGAKGHFRTDCTKLKKKQNHKSEDDDD 120
             +++SN+   + R+ ++NR KS +   V CW+CG  GHF+  C   KKK      DDD 
Sbjct: 209 GNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKNPKKKN-----DDDS 268

Query: 121 SIYTTEDAEDVLILSVDSPAESWILDSCASFHSSPSKELFRNFKSGNFGKVYLADNKALE 180
           +   TE+ +D L+L+VDSP + W+LDS ASFH++P +E+ +N+ +G+FGKVYLAD  AL+
Sbjct: 269 TNAVTEEVQDALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALD 328

Query: 181 IEGKGDVSIQTPAGNLWTLQDVRYIPSLKKNPISIGQLDSTGYATEFGKSSWKIVKGAMV 240
           + G GDV I  P G++W L+ VR+IP L++N IS+GQLD  G+A  F   +WK+ KGA V
Sbjct: 329 VVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARV 388

Query: 241 VARGTKSGTLYTTAECINMTAAAESASNSSLWHNRLGHMSVKGMKMLTAKGALEGLKSVD 300
           +ARG K+ TL  T+   +  A A++++++SLWH RLGHMS K MKML +KG L  LKS+D
Sbjct: 389 LARGKKTDTLNMTSCPRDTIAVADASTDTSLWHRRLGHMSEKWMKMLLSKGKLPELKSID 448

Query: 301 MGLCESCVMGKQKRVSFTKAAREPKKVRLEMVHTDVWGPSPVSSLGGSRYYVTFIDDFSR 360
             +CESC++GKQK+ SF K  R PK  +LE+VHTD+WGPSPV+SLGGSRYY+TFIDD SR
Sbjct: 449 FDMCESCILGKQKKASFLKTGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSSR 508

Query: 361 KVWVYFLKHKSDVFTTFKKWKAEVENQTGLKIKCLRSDNGGEYNKSEFITFCAAEGIRLI 420
           KVWVYFLK+KSDVF TFKKWKA VE +TGLK+KCLRSDNGGEY    F  +CAA+GIR+ 
Sbjct: 509 KVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRME 568

Query: 421 RTIPGKARQNGIVERMNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINRGPSVPLKFK 480
           +TIPG  +QNG+ ERMNRTLNER RSMR+H+GLPKTFWAD V+T  YLINRGPSVP++F+
Sbjct: 569 KTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADVVSTTTYLINRGPSVPMEFR 628

Query: 481 LPEEVWTGKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCYFIGYGSDMFGYRFWDEK 540
           LPEEVW+GKE+K+SHL+ F C +YVH+D + R KLDAK+  C+FIGYG + FGYRFWDE+
Sbjct: 629 LPEEVWSGKEVKFSHLKVFCCVSYVHIDSDARSKLDAKSKICFFIGYGDEKFGYRFWDEQ 688

Query: 541 NMKILRHCDVTFDENVMYKDREKINSKTTKQVGVELEWQE-NSRSDSTTEAKETPDPIAE 600
           N KI+R  +V F+E VMYKDR  + S  T+    + E+   +  ++ST + +   D    
Sbjct: 689 NRKIIRSRNVIFNEQVMYKDRLTVTSDVTEIDQKKSEFVNLDELTESTVQKRGEEDKENV 748

Query: 601 EPDVEQVAPEQVLRRSSRTTRAPDRYS 622
              V+   P   +RRSSR  R P RYS
Sbjct: 749 NSKVDLRTPIVEVRRSSRNIRPPQRYS 770

[Close]
BLAST of CmoCh05G009250 vs. TrEMBL
Match: A5C844_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044399 PE=4 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 1.2e-193
Identity = 336/626 (53.67%), Postives = 456/626 (72.84%), Query Frame = 1 

Query: 1   MSSLPESWDTVVAAISSSRGSDKLKFDEIRDVVLSESIRKRETGDSSGN--ALSVDRRGR 60
           ++SLP SW+ +  A+S+S G +KLK+++IRD++L+E IR+R+ G++SG+  AL+++ RGR
Sbjct: 149 LASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNLETRGR 208

Query: 61  SKSKSSNK---HGRSKSKNRGKSPNKPNVTCWSCGAKGHFRTDCTKLKKKQNHKSEDDDD 120
             +++SN+   + R+ ++NR KS +   V CW+CG  GHF+  C   KKK      +DD 
Sbjct: 209 GNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKN-----EDDS 268

Query: 121 SIYTTEDAEDVLILSVDSPAESWILDSCASFHSSPSKELFRNFKSGNFGKVYLADNKALE 180
           +   TE+  D L+L+VDSP + W+LDS ASFH++P +E+ +N+ +G+FGKVYLAD  AL+
Sbjct: 269 ANAVTEEVXDALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALD 328

Query: 181 IEGKGDVSIQTPAGNLWTLQDVRYIPSLKKNPISIGQLDSTGYATEFGKSSWKIVKGAMV 240
           + G GDV I  P G++W L+ VR+IP L++N IS+GQLD  G+A  F   +WK+ KG  V
Sbjct: 329 VVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGVRV 388

Query: 241 VARGTKSGTLYTTAECINMTAAAESASNSSLWHNRLGHMSVKGMKMLTAKGALEGLKSVD 300
           +ARG K+GTLY T+   +  A A++++++SLWH RLGHMS KGMKML +KG L  LKS+D
Sbjct: 389 LARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHMSEKGMKMLLSKGKLPELKSID 448

Query: 301 MGLCESCVMGKQKRVSFTKAAREPKKVRLEMVHTDVWGPSPVSSLGGSRYYVTFIDDFSR 360
             +CESC++GKQK+VSF K  R PK  +LE+VHTD+WGPSPV+SLGGSRYY+TFIDD SR
Sbjct: 449 FDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSSR 508

Query: 361 KVWVYFLKHKSDVFTTFKKWKAEVENQTGLKIKCLRSDNGGEYNKSEFITFCAAEGIRLI 420
           KVWVYFLK+KSDVF TFKKWKA VE +TGLK+KCLRSDNGGEY    F  +CAA+GIR+ 
Sbjct: 509 KVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRME 568

Query: 421 RTIPGKARQNGIVERMNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINRGPSVPLKFK 480
           +TIPG  +QNG+ ERMNRTLNER RSMR+H+GLPKTFWADAV+TAAYLINRGPSVP++F+
Sbjct: 569 KTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFR 628

Query: 481 LPEEVWTGKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCYFIGYGSDMFGYRFWDEK 540
           LPEEVW GKE+K+SHL+ FGC +YVH+D + R KLDA +  C+FIGYG + FGYRFWDE+
Sbjct: 629 LPEEVWNGKEVKFSHLKVFGCVSYVHIDSDARSKLDAXSKICFFIGYGDEKFGYRFWDEQ 688

Query: 541 NMKILRHCDVTFDENVMYKDREKINSKTTKQVGVELEWQENSRSDSTTEAKETPDPIAEE 600
             KI+R+      +   + + +++   T ++ G   +   NS+ D +T       P+ E 
Sbjct: 689 XRKIIRNVTEIDQKKSEFVNLDELTESTVQKGGEXDKENVNSQVDLST-------PVXE- 748

Query: 601 PDVEQVAPEQVLRRSSRTTRAPDRYS 622
                      +RRSSR  R P RYS
Sbjct: 749 -----------VRRSSRNIRPPQRYS 750

[Close]
BLAST of CmoCh05G009250 vs. TAIR10
Match: ATMG00710.1 (ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 90.1 bits (222), Expect = 5.2e-18
Identity = 41/76 (53.95%), Postives = 51/76 (67.11%), Query Frame = 1 

Query: 431 MNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINRGPSVPLKFKLPEEVWTGKELKYSH 490
           MNRT+ E+ RSM    GLPKTF ADA NTA ++IN+ PS  + F +P+EVW      YS+
Sbjct: 1   MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60

Query: 491 LRTFGCTAYVHVDPEK 507
           LR FGC AY+H D  K
Sbjct: 61  LRRFGCVAYIHCDEGK 76

[Close]
BLAST of CmoCh05G009250 vs. TAIR10
Match: ATMG00300.1 (ATMG00300.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 74.3 bits (181), Expect = 2.9e-13
Identity = 39/113 (34.51%), Postives = 61/113 (53.98%), Query Frame = 1 

Query: 228 KIVKGAMVVARGTKSGTLYT---TAECINMTAAAESASNSSLWHNRLGHMSVKGMKMLTA 287
           K++KG   + +G +  +LY    + E      A  +   + LWH+RL HMS +GM++L  
Sbjct: 30  KVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKDETRLWHSRLAHMSQRGMELLVK 89

Query: 288 KGALEGLKSVDMGLCESCVMGKQKRVSFTKAAREPKKVRLEMVHTDVWGPSPV 338
           KG L+  K   +  CE C+ GK  RV+F+   +   K  L+ VH+D+WG   V
Sbjct: 90  KGFLDSSKVSSLKFCEDCIYGKTHRVNFS-TGQHTTKNPLDYVHSDLWGAPSV 141

[Close]
BLAST of CmoCh05G009250 vs. TAIR10
Match: AT3G21000.1 (AT3G21000.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 53.9 bits (128), Expect = 4.1e-07
Identity = 39/151 (25.83%), Postives = 63/151 (41.72%), Query Frame = 1 

Query: 80  NKPNVTCWSCGAKGHFRTDCTKLKKKQNHKSEDDDDSIYTTEDAEDVLILSVDSPAESWI 139
           +K    C  C    H + DC         + ED+    Y  E   ++   + D   + WI
Sbjct: 224 SKSEKWCGLCYKNNHNQEDCKFRIHTDKEEKEDEIVVDYRLETVPNLGAKTYDD--DIWI 283

Query: 140 LDSCASFHSSPSKELFRNFKSGNFGKVYLADNKALEIEGKGDVSIQTPAGNLWTLQDVRY 199
           +   A  + +P  + F          V   D   L +EGKGDV I+   G   T+++V +
Sbjct: 284 IHKMAPINMTPYVKYFTTLDRTFKATVGTVDGTVLLVEGKGDVKIRMKEGKKKTIRNVIF 343

Query: 200 IPSLKKNPISIGQLDSTGYATEFGKSSWKIV 231
           +P L +N +S G++ S  Y+   G     IV
Sbjct: 344 VPGLNRNVLSFGKMVSKRYSISTGMQGECIV 372

[Close]
BLAST of CmoCh05G009250 vs. NCBI nr
Match: gi|1012357422|gb|KYP68607.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 725.7 bits (1872), Expect = 6.9e-206
Identity = 361/631 (57.21%), Postives = 465/631 (73.69%), Query Frame = 1 

Query: 1   MSSLPESWDTVVAAISSSRGSDKLKFDEIRDVVLSESIRKRETGD----SSGNALSVDRR 60
           +SSLPESW   V A+SSS   +KLK ++IRD++LSE +R+R++ +    +S +AL+ + R
Sbjct: 126 LSSLPESWAATVTAVSSSARDNKLKLNDIRDLILSEDVRRRDSEEPSSSTSSSALNTESR 185

Query: 61  GRSKSKSSNKHGRSKSKNRGKSPNKPNVTCWSCGAKGHFRTDCTKLKKKQNHKSEDDDDS 120
           GR+  K  N  GRSKS+ +G+   + ++ CW+C  +GHF   C   KK +NHK  DDD+S
Sbjct: 186 GRTTQKGYNSRGRSKSRAKGQPKFRNDIVCWNCDKRGHFTNQCKAPKKNKNHKKRDDDES 245

Query: 121 IYT-TEDAEDVLILSVDSPAESWILDSCASFHSSPSKELFRNFKSGNFGKVYLADNKALE 180
               T++ +D LI S+DSP ESWI+DS ASFH++PS EL  N+ SG FGKVYLAD K L 
Sbjct: 246 ANAATDEIDDALICSLDSPIESWIMDSGASFHTTPSNELLTNYVSGRFGKVYLADGKPLN 305

Query: 181 IEGKGDVSIQTPAGNLWTLQDVRYIPSLKKNPISIGQLDSTGYATEFGKSSWKIVKGAMV 240
           I GKGD++I+T +G+ WTL++VR+IP+LK+N IS+GQLD  G+ T FG  +WK+ KG ++
Sbjct: 306 IVGKGDIAIRTSSGSHWTLKNVRHIPALKRNLISVGQLDDEGHETTFGDGAWKVKKGNLI 365

Query: 241 VARGTKSGTLYTTAECINMTAAAESASNSSLWHNRLGHMSVKGMKMLTAKGALEGLKSVD 300
           VARG K G+LY  A+  NM A  E+A+NS LWH RLGHMS KGMK++  KG L  LK VD
Sbjct: 366 VARGKKRGSLYMVAD-ENMIAVTEAANNSFLWHQRLGHMSEKGMKLMATKGKLSKLKHVD 425

Query: 301 MGLCESCVMGKQKRVSFTKAAREPKKVRLEMVHTDVWGPSPVSSLGGSRYYVTFIDDFSR 360
           +G CE C++GKQ+++SF++  +  K  RLE+VHTDVWGP+PV SLGGS YYVTFIDD +R
Sbjct: 426 VGTCEHCILGKQRKISFSRQGKTLKTERLELVHTDVWGPAPVKSLGGSCYYVTFIDDATR 485

Query: 361 KVWVYFLKHKSDVFTTFKKWKAEVENQTGLKIKCLRSDNGGEYNKSEFITFCAAEGIRLI 420
           KVWVYFLK+KSDVF+ FK+WK EVENQTGLK+K L+SDNGGEYN  EF  FC+  GIR+I
Sbjct: 486 KVWVYFLKNKSDVFSVFKRWKTEVENQTGLKLKSLKSDNGGEYNSHEFKNFCSEHGIRMI 545

Query: 421 RTIPGKARQNGIVERMNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINRGPSVPLKFK 480
           +TIPG   QNG+ ERMNRTLNER R MRI SGLPK FWADA+NTAAYLINRGPSVPL ++
Sbjct: 546 KTIPGTPEQNGVAERMNRTLNERARCMRIQSGLPKVFWADAINTAAYLINRGPSVPLGYQ 605

Query: 481 LPEEVWTGKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCYFIGYGSDMFGYRFWDEK 540
           LPEEVW+GKE+  SHLR FGC +YV +D + RDKLD KA KCYFIGYGSDM+GYRFWD++
Sbjct: 606 LPEEVWSGKEVNLSHLRVFGCVSYVLIDSDSRDKLDPKAKKCYFIGYGSDMYGYRFWDDQ 665

Query: 541 NMKILRHCDVTFDENVMYKDR---EKINSKTTKQVGVELEWQENSRSDSTTEAKETPDPI 600
           N KI+R  +VTF+EN+ YKDR   E I++    +   ++E +E S SD T  ++ T   +
Sbjct: 666 NKKIIRSRNVTFNENLFYKDRFSAESIDTDKLPEPSEKVELEEISESDITNRSQSTDIEV 725

Query: 601 AEEPDVEQVAPEQVLRRSSRTTRAPDRYSTS 624
             EP          LRRS R + AP+RYS S
Sbjct: 726 ESEP------ASPPLRRSCRVSVAPERYSPS 749

[Close]
BLAST of CmoCh05G009250 vs. NCBI nr
Match: gi|147828211|emb|CAN71109.1| (hypothetical protein VITISV_001479 [Vitis vinifera])

HSP 1 Score: 710.7 bits (1833), Expect = 2.3e-201
Identity = 348/627 (55.50%), Postives = 468/627 (74.64%), Query Frame = 1 

Query: 1   MSSLPESWDTVVAAISSSRGSDKLKFDEIRDVVLSESIRKRETGDSSGN--ALSVDRRGR 60
           ++SLP SW+ +  A+S+S G +KLK+++IRD++L+E IR+R+ G++SG+  AL+++ RGR
Sbjct: 121 LASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNLETRGR 180

Query: 61  SKSKSSNK---HGRSKSKNRGKSPNKPNVTCWSCGAKGHFRTDCTKLKKKQNHKSEDDDD 120
             +++SN+   + R+ ++NR KS +   V CW+CG  GHF+  C   KKK      +DD 
Sbjct: 181 GNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKN-----EDDS 240

Query: 121 SIYTTEDAEDVLILSVDSPAESWILDSCASFHSSPSKELFRNFKSGNFGKVYLADNKALE 180
           +   TE+ +D L+L+VDSP + W+LDS ASFH++P +E+ +N+ +G+FGKVYLAD  AL+
Sbjct: 241 ANAVTEEVQDALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALD 300

Query: 181 IEGKGDVSIQTPAGNLWTLQDVRYIPSLKKNPISIGQLDSTGYATEFGKSSWKIVKGAMV 240
           + G GDV I  P G++W L+ VR+IP L++N IS+GQLD  G+A  F   +WK+ KGA V
Sbjct: 301 VVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARV 360

Query: 241 VARGTKSGTLYTTAECINMTAAAESASNSSLWHNRLGHMSVKGMKMLTAKGALEGLKSVD 300
           +ARG K+GTLY T+   +  A A++++++SLWH RLGHMS KGMKML +KG L  LKS+D
Sbjct: 361 LARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHMSEKGMKMLLSKGKLPELKSID 420

Query: 301 MGLCESCVMGKQKRVSFTKAAREPKKVRLEMVHTDVWGPSPVSSLGGSRYYVTFIDDFSR 360
             +CESC++GKQK+VSF K  R PK  +LE+VHTD+WGPSPV+SLGGSRYY+TFIDD SR
Sbjct: 421 FDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSSR 480

Query: 361 KVWVYFLKHKSDVFTTFKKWKAEVENQTGLKIKCLRSDNGGEYNKSEFITFCAAEGIRLI 420
           KVWVYFLK+KSDVF TFKKWK  VE +TGLK+KCLRSDNGGEY    F  +CAA+GIR+ 
Sbjct: 481 KVWVYFLKNKSDVFVTFKKWKXMVETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRME 540

Query: 421 RTIPGKARQNGIVERMNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINRGPSVPLKFK 480
           +TIPG  +QNG+ ERMNRTLNER RSMR+H+GLPKTFWADAV+TAAYLINRGPSVP++F+
Sbjct: 541 KTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFR 600

Query: 481 LPEEVWTGKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCYFIGYGSDMFGYRFWDEK 540
           LPEEVW+GKE+K+SHL+ FGC +YVH+D + R KLDAK+  C+FIGYG + FGYRFWDE+
Sbjct: 601 LPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYGDEKFGYRFWDEQ 660

Query: 541 NMKILRHCDVTFDENVMYKDREKINSKTTKQVGVELEWQE-NSRSDSTTEAKETPDPIAE 600
           N KI+R  +V F+E VMYKDR  + S  T+    + E+   +  ++ST +     D    
Sbjct: 661 NRKIIRSRNVIFNEQVMYKDRSTVTSDVTEIDQKKSEFVNLDELTESTVQKGGEEDKENV 720

Query: 601 EPDVEQVAPEQVLRRSSRTTRAPDRYS 622
              V+   P   +RRSSR TR P RYS
Sbjct: 721 NSQVDLSTPVVEVRRSSRNTRPPQRYS 742

[Close]
BLAST of CmoCh05G009250 vs. NCBI nr
Match: gi|147788024|emb|CAN69340.1| (hypothetical protein VITISV_032634 [Vitis vinifera])

HSP 1 Score: 709.9 bits (1831), Expect = 3.9e-201
Identity = 351/628 (55.89%), Postives = 467/628 (74.36%), Query Frame = 1 

Query: 1   MSSLPESWDTVVAAISSSRGSDKLKFDEIRDVVLSESIRKRETGDSSGN--ALSVDRRGR 60
           ++SLP SW+ +  A+S+S G +KLK+++IRD++L+E IR+R+ G++SG+  AL+++ RGR
Sbjct: 149 LASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNLETRGR 208

Query: 61  SKSKSSNKHGRSKSKN----RGKSPNKPNVTCWSCGAKGHFRTDCTKLKKKQNHKSEDDD 120
             +++SN HGRS S+N    R KS +   V CW+CG  GHF+  C   KKK      +DD
Sbjct: 209 GNNRNSN-HGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKN-----EDD 268

Query: 121 DSIYTTEDAEDVLILSVDSPAESWILDSCASFHSSPSKELFRNFKSGNFGKVYLADNKAL 180
            +   TE+  D L+L+VDSP + W+LDS ASFH++P +E+ +N+ +G+FGKVYLAD  AL
Sbjct: 269 SANAVTEEVXDALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSAL 328

Query: 181 EIEGKGDVSIQTPAGNLWTLQDVRYIPSLKKNPISIGQLDSTGYATEFGKSSWKIVKGAM 240
           ++ G GDV I  P G++W L+ VR+IP L++N IS+GQLD  G+A  F   +WK+ KG  
Sbjct: 329 DVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGVR 388

Query: 241 VVARGTKSGTLYTTAECINMTAAAESASNSSLWHNRLGHMSVKGMKMLTAKGALEGLKSV 300
           V+ARG K+GTLY T+   +  A A++++++SLWH RLGHMS KGMKML +KG L  LKS+
Sbjct: 389 VLARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHMSEKGMKMLLSKGKLPELKSI 448

Query: 301 DMGLCESCVMGKQKRVSFTKAAREPKKVRLEMVHTDVWGPSPVSSLGGSRYYVTFIDDFS 360
           D  +CESC++GKQK+VSF K  R PK  +LE+VHTD+WGPSPV+SLGGSRYY+TFIDD S
Sbjct: 449 DFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSS 508

Query: 361 RKVWVYFLKHKSDVFTTFKKWKAEVENQTGLKIKCLRSDNGGEYNKSEFITFCAAEGIRL 420
           RKVWVYFLK+KSDVF TFKKWKA VE +TGLK+KCLRSDNGGEY    F  +CAA+GIR+
Sbjct: 509 RKVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRM 568

Query: 421 IRTIPGKARQNGIVERMNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINRGPSVPLKF 480
            +TIPG  +QNG+ ERMNRTLNER RSMR+H+GLPKTFWADAV+TAAYLINRGPSVP++F
Sbjct: 569 EKTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEF 628

Query: 481 KLPEEVWTGKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCYFIGYGSDMFGYRFWDE 540
           +LPEEVW+GKE+K+SHL+ FGC +YVH+D + R KLDAK+  C+FIGYG + FGYRFWDE
Sbjct: 629 RLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYGDEKFGYRFWDE 688

Query: 541 KNMKILRHCDVTFDENVMYKDREKINSKTTKQVGVELEWQE-NSRSDSTTEAKETPDPIA 600
           +N KI+R  +V F+E VMYKDR  + S  T+    + E+   +  ++ST + +   D   
Sbjct: 689 QNRKIIRSRNVIFNEQVMYKDRLTVTSXVTEIDQKKSEFVNLDELTESTVQKRGEEDKEN 748

Query: 601 EEPDVEQVAPEQVLRRSSRTTRAPDRYS 622
               V+   P   +RRSSR  R P RYS
Sbjct: 749 VNSKVDLRTPVVEVRRSSRNIRPPQRYS 770

[Close]
BLAST of CmoCh05G009250 vs. NCBI nr
Match: gi|147790177|emb|CAN67882.1| (hypothetical protein VITISV_022356 [Vitis vinifera])

HSP 1 Score: 687.2 bits (1772), Expect = 2.7e-194
Identity = 339/627 (54.07%), Postives = 460/627 (73.37%), Query Frame = 1 

Query: 1   MSSLPESWDTVVAAISSSRGSDKLKFDEIRDVVLSESIRKRETGDSSGN--ALSVDRRGR 60
           ++SL  SW+ +  A+S+S G +KLK+++IRD++L+E IR+R+ G++SG+  AL+++ RG+
Sbjct: 149 LASLLNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGSSSALNLETRGK 208

Query: 61  SKSKSSNK---HGRSKSKNRGKSPNKPNVTCWSCGAKGHFRTDCTKLKKKQNHKSEDDDD 120
             +++SN+   + R+ ++NR KS +   V CW+CG  GHF+  C   KKK      DDD 
Sbjct: 209 GNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKNPKKKN-----DDDS 268

Query: 121 SIYTTEDAEDVLILSVDSPAESWILDSCASFHSSPSKELFRNFKSGNFGKVYLADNKALE 180
           +   TE+ +D L+L+VDSP + W+LDS ASFH++P +E+ +N+ +G+FGKVYLAD  AL+
Sbjct: 269 TNAVTEEVQDALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALD 328

Query: 181 IEGKGDVSIQTPAGNLWTLQDVRYIPSLKKNPISIGQLDSTGYATEFGKSSWKIVKGAMV 240
           + G GDV I  P G++W L+ VR+IP L++N IS+GQLD  G+A  F   +WK+ KGA V
Sbjct: 329 VVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARV 388

Query: 241 VARGTKSGTLYTTAECINMTAAAESASNSSLWHNRLGHMSVKGMKMLTAKGALEGLKSVD 300
           +ARG K+ TL  T+   +  A A++++++SLWH RLGHMS K MKML +KG L  LKS+D
Sbjct: 389 LARGKKTDTLNMTSCPRDTIAVADASTDTSLWHRRLGHMSEKWMKMLLSKGKLPELKSID 448

Query: 301 MGLCESCVMGKQKRVSFTKAAREPKKVRLEMVHTDVWGPSPVSSLGGSRYYVTFIDDFSR 360
             +CESC++GKQK+ SF K  R PK  +LE+VHTD+WGPSPV+SLGGSRYY+TFIDD SR
Sbjct: 449 FDMCESCILGKQKKASFLKTGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSSR 508

Query: 361 KVWVYFLKHKSDVFTTFKKWKAEVENQTGLKIKCLRSDNGGEYNKSEFITFCAAEGIRLI 420
           KVWVYFLK+KSDVF TFKKWKA VE +TGLK+KCLRSDNGGEY    F  +CAA+GIR+ 
Sbjct: 509 KVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRME 568

Query: 421 RTIPGKARQNGIVERMNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINRGPSVPLKFK 480
           +TIPG  +QNG+ ERMNRTLNER RSMR+H+GLPKTFWAD V+T  YLINRGPSVP++F+
Sbjct: 569 KTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADVVSTTTYLINRGPSVPMEFR 628

Query: 481 LPEEVWTGKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCYFIGYGSDMFGYRFWDEK 540
           LPEEVW+GKE+K+SHL+ F C +YVH+D + R KLDAK+  C+FIGYG + FGYRFWDE+
Sbjct: 629 LPEEVWSGKEVKFSHLKVFCCVSYVHIDSDARSKLDAKSKICFFIGYGDEKFGYRFWDEQ 688

Query: 541 NMKILRHCDVTFDENVMYKDREKINSKTTKQVGVELEWQE-NSRSDSTTEAKETPDPIAE 600
           N KI+R  +V F+E VMYKDR  + S  T+    + E+   +  ++ST + +   D    
Sbjct: 689 NRKIIRSRNVIFNEQVMYKDRLTVTSDVTEIDQKKSEFVNLDELTESTVQKRGEEDKENV 748

Query: 601 EPDVEQVAPEQVLRRSSRTTRAPDRYS 622
              V+   P   +RRSSR  R P RYS
Sbjct: 749 NSKVDLRTPIVEVRRSSRNIRPPQRYS 770

[Close]
BLAST of CmoCh05G009250 vs. NCBI nr
Match: gi|147827119|emb|CAN62181.1| (hypothetical protein VITISV_044399 [Vitis vinifera])

HSP 1 Score: 684.5 bits (1765), Expect = 1.8e-193
Identity = 336/626 (53.67%), Postives = 456/626 (72.84%), Query Frame = 1 

Query: 1   MSSLPESWDTVVAAISSSRGSDKLKFDEIRDVVLSESIRKRETGDSSGN--ALSVDRRGR 60
           ++SLP SW+ +  A+S+S G +KLK+++IRD++L+E IR+R+ G++SG+  AL+++ RGR
Sbjct: 149 LASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNLETRGR 208

Query: 61  SKSKSSNK---HGRSKSKNRGKSPNKPNVTCWSCGAKGHFRTDCTKLKKKQNHKSEDDDD 120
             +++SN+   + R+ ++NR KS +   V CW+CG  GHF+  C   KKK      +DD 
Sbjct: 209 GNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKN-----EDDS 268

Query: 121 SIYTTEDAEDVLILSVDSPAESWILDSCASFHSSPSKELFRNFKSGNFGKVYLADNKALE 180
           +   TE+  D L+L+VDSP + W+LDS ASFH++P +E+ +N+ +G+FGKVYLAD  AL+
Sbjct: 269 ANAVTEEVXDALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALD 328

Query: 181 IEGKGDVSIQTPAGNLWTLQDVRYIPSLKKNPISIGQLDSTGYATEFGKSSWKIVKGAMV 240
           + G GDV I  P G++W L+ VR+IP L++N IS+GQLD  G+A  F   +WK+ KG  V
Sbjct: 329 VVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGVRV 388

Query: 241 VARGTKSGTLYTTAECINMTAAAESASNSSLWHNRLGHMSVKGMKMLTAKGALEGLKSVD 300
           +ARG K+GTLY T+   +  A A++++++SLWH RLGHMS KGMKML +KG L  LKS+D
Sbjct: 389 LARGKKTGTLYMTSCPRDTIAVADASTDTSLWHRRLGHMSEKGMKMLLSKGKLPELKSID 448

Query: 301 MGLCESCVMGKQKRVSFTKAAREPKKVRLEMVHTDVWGPSPVSSLGGSRYYVTFIDDFSR 360
             +CESC++GKQK+VSF K  R PK  +LE+VHTD+WGPSPV+SLGGSRYY+TFIDD SR
Sbjct: 449 FDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPVASLGGSRYYITFIDDSSR 508

Query: 361 KVWVYFLKHKSDVFTTFKKWKAEVENQTGLKIKCLRSDNGGEYNKSEFITFCAAEGIRLI 420
           KVWVYFLK+KSDVF TFKKWKA VE +TGLK+KCLRSDNGGEY    F  +CAA+GIR+ 
Sbjct: 509 KVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGEYIDGGFSEYCAAQGIRME 568

Query: 421 RTIPGKARQNGIVERMNRTLNERGRSMRIHSGLPKTFWADAVNTAAYLINRGPSVPLKFK 480
           +TIPG  +QNG+ ERMNRTLNER RSMR+H+GLPKTFWADAV+TAAYLINRGPSVP++F+
Sbjct: 569 KTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFR 628

Query: 481 LPEEVWTGKELKYSHLRTFGCTAYVHVDPEKRDKLDAKAVKCYFIGYGSDMFGYRFWDEK 540
           LPEEVW GKE+K+SHL+ FGC +YVH+D + R KLDA +  C+FIGYG + FGYRFWDE+
Sbjct: 629 LPEEVWNGKEVKFSHLKVFGCVSYVHIDSDARSKLDAXSKICFFIGYGDEKFGYRFWDEQ 688

Query: 541 NMKILRHCDVTFDENVMYKDREKINSKTTKQVGVELEWQENSRSDSTTEAKETPDPIAEE 600
             KI+R+      +   + + +++   T ++ G   +   NS+ D +T       P+ E 
Sbjct: 689 XRKIIRNVTEIDQKKSEFVNLDELTESTVQKGGEXDKENVNSQVDLST-------PVXE- 748

Query: 601 PDVEQVAPEQVLRRSSRTTRAPDRYS 622
                      +RRSSR  R P RYS
Sbjct: 749 -----------VRRSSRNIRPPQRYS 750

The following BLAST results are available for this feature:
BLAST of CmoCh05G009250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
POLX_TOBAC7.5e-12841.28Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
COPIA_DROME8.4e-6330.80Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
M710_ARATH9.1e-1753.95Uncharacterized mitochondrial protein AtMg00710 OS=Arabidopsis thaliana GN=AtMg0... [more]
YG21B_YEAST2.7e-1620.89Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
YA11B_YEAST4.5e-1625.94Truncated transposon Ty1-A Gag-Pol polyprotein OS=Saccharomyces cerevisiae (stra... [more]
BLAST of CmoCh05G009250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A151TNK0_CAJCA4.8e-20657.21Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=... [more]
A5CBM1_VITVI1.6e-20155.50Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001479 PE=4 SV=1[more]
A5AS37_VITVI2.7e-20155.89Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032634 PE=4 SV=1[more]
A5BFU1_VITVI1.9e-19454.07Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022356 PE=4 SV=1[more]
A5C844_VITVI1.2e-19353.67Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044399 PE=4 SV=1[more]
BLAST of CmoCh05G009250 vs. TAIR10
Match NameE-valueIdentityDescription
ATMG00710.15.2e-1853.95ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
ATMG00300.12.9e-1334.51ATMG00300.1 Gag-Pol-related retrotransposon family protein[more]
AT3G21000.14.1e-0725.83 Gag-Pol-related retrotransposon family protein[more]
BLAST of CmoCh05G009250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1012357422|gb|KYP68607.1|6.9e-20657.21Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan][more]
gi|147828211|emb|CAN71109.1|2.3e-20155.50hypothetical protein VITISV_001479 [Vitis vinifera][more]
gi|147788024|emb|CAN69340.1|3.9e-20155.89hypothetical protein VITISV_032634 [Vitis vinifera][more]
gi|147790177|emb|CAN67882.1|2.7e-19454.07hypothetical protein VITISV_022356 [Vitis vinifera][more]
gi|147827119|emb|CAN62181.1|1.8e-19353.67hypothetical protein VITISV_044399 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR001878Znf_CCHC
IPR012337RNaseH-like_sf
IPR025724GAG-pre-integrase_dom
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G009250.1CmoCh05G009250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 324..437
score: 1.1
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 315..485
score: 23
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 79..101
score: 3.
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 85..101
score: 1.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 85..101
score: 0.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 86..101
score:
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 67..108
score: 1.7
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 324..475
score: 1.7
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 324..479
score: 1.07
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 255..307
score: 2.0
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 589..599
score: 2.1E-179coord: 1..557
score: 2.1E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G009250Cucumber (Gy14) v2cgybcmoB673
CmoCh05G009250Melon (DHL92) v3.6.1cmomedB802
CmoCh05G009250Silver-seed gourdcarcmoB1425
CmoCh05G009250Watermelon (97103) v2cmowmbB804
CmoCh05G009250Cucumber (Chinese Long) v3cmocucB0935
CmoCh05G009250Watermelon (97103) v2cmowmbB803
CmoCh05G009250Wax gourdcmowgoB0922
CmoCh05G009250Cucurbita moschata (Rifu)cmocmoB155
CmoCh05G009250Cucurbita moschata (Rifu)cmocmoB157
CmoCh05G009250Cucumber (Gy14) v1cgycmoB0764
CmoCh05G009250Cucurbita maxima (Rimu)cmacmoB197
CmoCh05G009250Cucurbita maxima (Rimu)cmacmoB201
CmoCh05G009250Cucurbita maxima (Rimu)cmacmoB787
CmoCh05G009250Cucurbita maxima (Rimu)cmacmoB788
CmoCh05G009250Wild cucumber (PI 183967)cmocpiB798
CmoCh05G009250Cucumber (Chinese Long) v2cmocuB794
CmoCh05G009250Melon (DHL92) v3.5.1cmomeB705
CmoCh05G009250Watermelon (Charleston Gray)cmowcgB686
CmoCh05G009250Watermelon (Charleston Gray)cmowcgB687
CmoCh05G009250Watermelon (97103) v1cmowmB743
CmoCh05G009250Watermelon (97103) v1cmowmB744
CmoCh05G009250Cucurbita pepo (Zucchini)cmocpeB721
CmoCh05G009250Cucurbita pepo (Zucchini)cmocpeB726
CmoCh05G009250Cucurbita pepo (Zucchini)cmocpeB753
CmoCh05G009250Bottle gourd (USVL1VR-Ls)cmolsiB711