CmoCh05G009090 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G009090
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMulticellular trichome development C2H2 zinc finger transcription factor
LocationCmo_Chr05 : 6975793 .. 6976255 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATTATTCGGAATTGAGCTACTCGACCTCCCGACAGGAGGAGGAGGAGAAGAACACAGAGATTCTCCAATGACAGGGCTGTGTGGGAATCTTGATGACAGACCAATGAGAAGCAAGAGAAGGTTCCAGTGTGAGTACTGTTTGAAGGAGTTCACGAACTCACAGGCACTGGGAGGTCACCAAAACGCCCACAAGAAGGAGAGGTTGAAGAAGAAGATGCTCCAAATACAAGCACAAAACTCCAGCCTTTGTCATTACCTTCAAAACAATTATAATTCCCATTTTGCCCCTGAATCTGCTGGGCGCCACATCAGCTTCGGCTTCAGCTTCCGTCGTGCCGCCCACACCAAACCTATTCTGGTAAATTTCATGTCTGCCCATTCTTGTAATTTCAACCAAACCCCTTAAATCTCTATGTATTAATATCTGATTTCATGAATTAAAGTTTGGGATGGACTAA

mRNA sequence

ATGAGATTATTCGGAATTGAGCTACTCGACCTCCCGACAGGAGGAGGAGGAGAAGAACACAGAGATTCTCCAATGACAGGGCTGTGTGGGAATCTTGATGACAGACCAATGAGAAGCAAGAGAAGGTTCCAGTGTGAGTACTGTTTGAAGGAGTTCACGAACTCACAGGCACTGGGAGGTCACCAAAACGCCCACAAGAAGGAGAGGTTGAAGAAGAAGATGCTCCAAATACAAGCACAAAACTCCAGCCTTTGTCATTACCTTCAAAACAATTATAATTCCCATTTTGCCCCTGAATCTGCTGGGCGCCACATCAGCTTCGGCTTCAGCTTCCGTCGTGCCGCCCACACCAAACCTATTCTGTTTGGGATGGACTAA

Coding sequence (CDS)

ATGAGATTATTCGGAATTGAGCTACTCGACCTCCCGACAGGAGGAGGAGGAGAAGAACACAGAGATTCTCCAATGACAGGGCTGTGTGGGAATCTTGATGACAGACCAATGAGAAGCAAGAGAAGGTTCCAGTGTGAGTACTGTTTGAAGGAGTTCACGAACTCACAGGCACTGGGAGGTCACCAAAACGCCCACAAGAAGGAGAGGTTGAAGAAGAAGATGCTCCAAATACAAGCACAAAACTCCAGCCTTTGTCATTACCTTCAAAACAATTATAATTCCCATTTTGCCCCTGAATCTGCTGGGCGCCACATCAGCTTCGGCTTCAGCTTCCGTCGTGCCGCCCACACCAAACCTATTCTGTTTGGGATGGACTAA
Homology
[Close]
BLAST of CmoCh05G009090 vs. Swiss-Prot
Match: ZFP5_ARATH (Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.0e-15
Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 1 

Query: 1   MRLFGIELLDLPTGGGGEEHRDSPMTGLCGNLDDRPMRSKRRFQCEYCLKEFTNSQALGG 60
           ++LFG EL+      G      +    +  + +   +   +R +C+YC KEF NSQALGG
Sbjct: 23  IKLFGFELIS-----GSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGG 82

Query: 61  HQNAHKKERLKKKMLQIQAQNSSLCHYLQNN 92
           HQNAHKKERLKKK LQ+QA+ +S+ +YL N+
Sbjct: 83  HQNAHKKERLKKKRLQLQARRASIGYYLTNH 108

[Close]
BLAST of CmoCh05G009090 vs. Swiss-Prot
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-09
Identity = 38/98 (38.78%), Postives = 52/98 (53.06%), Query Frame = 1 

Query: 1  MRLFGIELLDLPTGGGGEEHRDSPMTGLCGNLDDRPMRSKRRFQCEYCLKEFTNSQALGG 60
          ++LFGI LL+  T    +     P +G             R+++C+YC +EF NSQALGG
Sbjct: 8  LKLFGINLLET-TSVQNQSSEPRPGSGSGSE--------SRKYECQYCCREFANSQALGG 67

Query: 61 HQNAHKKERLKKKMLQIQAQNSSLCHYLQNNYNSHFAP 99
          HQNAHKKER   K  Q+ A      H+   N++ H  P
Sbjct: 68 HQNAHKKERQLLKRAQMLATRGLPRHH---NFHPHTNP 93

[Close]
BLAST of CmoCh05G009090 vs. Swiss-Prot
Match: GIS2_ARATH (Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.1e-09
Identity = 33/91 (36.26%), Postives = 47/91 (51.65%), Query Frame = 1 

Query: 1   MRLFGIELLDLPTGGGGEEHRDSPMTGLCGNLDDRPMRSKRRFQCEYCLKEFTNSQALGG 60
           +RLFG E       G   E  +S       N   +    ++RF+C YC + F  SQALGG
Sbjct: 19  IRLFGFEF------GASHEESESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGG 78

Query: 61  HQNAHKKERLKKKMLQIQAQNSSLCHYLQNN 92
           HQNAHK+ER + K   + +  ++  H  QN+
Sbjct: 79  HQNAHKRERQQTKRFNLHSNAAAFFHRQQNH 103

[Close]
BLAST of CmoCh05G009090 vs. Swiss-Prot
Match: GIS_ARATH (Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.7e-08
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 1 

Query: 18  EEHRDSPMTGLCGNLDDRPMRSKRRFQCEYCLKEFTNSQALGGHQNAHKKER 70
           EE  +   TG   + D+  +   RRF+C YC + F  SQALGGHQNAHK+ER
Sbjct: 67  EEEEEEDQTG-DNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRER 117

[Close]
BLAST of CmoCh05G009090 vs. Swiss-Prot
Match: ZFP8_ARATH (Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 8.5e-07
Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 1 

Query: 34  DRPMRSKRRFQCEYCLKEFTNSQALGGHQNAHKKERLKKKMLQIQAQNSSLCHYLQNN 92
           D+   + RRF+C YC + F  SQALGGHQNAHK+ER         A+  S+  YL ++
Sbjct: 86  DKDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQ-------HAKRGSMTSYLHHH 136

[Close]
BLAST of CmoCh05G009090 vs. TrEMBL
Match: A0A0A0KNG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G477610 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 7.2e-21
Identity = 53/75 (70.67%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 35  RPMRSKRRFQCEYCLKEFTNSQALGGHQNAHKKERLKKKMLQIQAQNSSLCHYLQNNYNS 94
           R +R++  F C+YCLKEFTNSQALGGHQNAHKKERLK+K LQI+AQNSSL  YLQ  +NS
Sbjct: 2   RNVRTRTLFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLRRYLQTYFNS 61

Query: 95  HFAPESAGRHISFGF 110
           HF+ E  G HISF F
Sbjct: 62  HFSHEFDGSHISFTF 76

[Close]
BLAST of CmoCh05G009090 vs. TrEMBL
Match: A0A0J8C615_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g147790 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.5e-15
Identity = 51/102 (50.00%), Postives = 63/102 (61.76%), Query Frame = 1 

Query: 1   MRLFGIELLDLPTGGGGEEHRDSPMTGLCGNL---DDRPMR----------SKRRFQCEY 60
           +RLFG EL D      GEE  +S  T   GN    DD   R           +++F+C+Y
Sbjct: 5   LRLFGFEL-DTYKNNEGEESTNSSNTVSSGNKEKSDDNNRRCSSVNNIIEIEQKKFECQY 64

Query: 61  CLKEFTNSQALGGHQNAHKKERLKKKMLQIQAQNSSLCHYLQ 90
           C KEF NSQALGGHQNAHKKER+KKK LQ+QA+ +S+  YLQ
Sbjct: 65  CYKEFANSQALGGHQNAHKKERMKKKRLQLQARKASMNFYLQ 105

[Close]
BLAST of CmoCh05G009090 vs. TrEMBL
Match: A0A0A0KVQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603380 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 7.7e-15
Identity = 43/75 (57.33%), Postives = 58/75 (77.33%), Query Frame = 1 

Query: 42  RFQCEYCLKEFTNSQALGGHQNAHKKERLKKKMLQIQAQNSSLCHYLQNNYNSH------ 101
           +F+C+YCLKEFTNSQALGGHQNAHKKERLKKK +Q+QA+ ++L +YLQ+N N++      
Sbjct: 104 KFECQYCLKEFTNSQALGGHQNAHKKERLKKKKMQLQARKATLTYYLQSNSNNNNHFLYD 163

Query: 102 FAPESAGRHISFGFS 111
           + P S+  + SF  S
Sbjct: 164 YDPNSSSPNSSFFIS 178

[Close]
BLAST of CmoCh05G009090 vs. TrEMBL
Match: A5B5F1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029869 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.3e-14
Identity = 50/110 (45.45%), Postives = 65/110 (59.09%), Query Frame = 1 

Query: 1   MRLFGIELLDLPTGGG-------GEEHRDSPMTGLCGNLDDRPMRSK--------RRFQC 60
           +RLFG EL     G          +E  +S  T   G   ++P   K        ++F+C
Sbjct: 29  LRLFGFELDPYKKGESCLKESVERDESVNSSNTDSSGR--EKPSXEKNSTVEPEDKKFEC 88

Query: 61  EYCLKEFTNSQALGGHQNAHKKERLKKKMLQIQAQNSSLCHYLQNNYNSH 96
           +YC KEF NSQALGGHQNAHKKER+KKK LQ+QA+ +S+ HYLQ   N+H
Sbjct: 89  QYCFKEFANSQALGGHQNAHKKERMKKKRLQLQARKASINHYLQPLQNNH 136

[Close]
BLAST of CmoCh05G009090 vs. TrEMBL
Match: I3T5F0_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.8e-14
Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = 1 

Query: 1   MRLFGIELLD---LPTGGGGEEHRDSPMTGLCGNLDDRPMRSK----RRFQCEYCLKEFT 60
           +RLFG EL     +   G G+E  +S  +   G   ++ ++ K    R+F+C++C KEF 
Sbjct: 24  LRLFGFELNPSKIVRESGEGDESVNSSTSVSSGG--EKTVQEKNPDERKFECQFCFKEFA 83

Query: 61  NSQALGGHQNAHKKERLKKKMLQIQAQNSSLCHYLQ----NNYN-SHFAP 99
           NSQALGGHQNAHKKER+KKK LQ+QA+ +S+ +YLQ    NN+N S  AP
Sbjct: 84  NSQALGGHQNAHKKERMKKKRLQLQAKRASVNYYLQPFQSNNHNGSDHAP 131

[Close]
BLAST of CmoCh05G009090 vs. TAIR10
Match: AT1G10480.1 (AT1G10480.1 zinc finger protein 5)

HSP 1 Score: 82.0 bits (201), Expect = 2.8e-16
Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 1 

Query: 1   MRLFGIELLDLPTGGGGEEHRDSPMTGLCGNLDDRPMRSKRRFQCEYCLKEFTNSQALGG 60
           ++LFG EL+      G      +    +  + +   +   +R +C+YC KEF NSQALGG
Sbjct: 23  IKLFGFELIS-----GSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGG 82

Query: 61  HQNAHKKERLKKKMLQIQAQNSSLCHYLQNN 92
           HQNAHKKERLKKK LQ+QA+ +S+ +YL N+
Sbjct: 83  HQNAHKKERLKKKRLQLQARRASIGYYLTNH 108

[Close]
BLAST of CmoCh05G009090 vs. TAIR10
Match: AT1G68360.1 (AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 7.9e-11
Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 1 

Query: 40  KRRFQCEYCLKEFTNSQALGGHQNAHKKERLKKKMLQIQAQNS---------SLCHYLQN 99
           +R+++C+YC +EF NSQALGGHQNAHKKER + K  Q+QA  +         S   +L+N
Sbjct: 70  ERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQFLRN 129

[Close]
BLAST of CmoCh05G009090 vs. TAIR10
Match: AT1G67030.1 (AT1G67030.1 zinc finger protein 6)

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-10
Identity = 38/98 (38.78%), Postives = 52/98 (53.06%), Query Frame = 1 

Query: 1  MRLFGIELLDLPTGGGGEEHRDSPMTGLCGNLDDRPMRSKRRFQCEYCLKEFTNSQALGG 60
          ++LFGI LL+  T    +     P +G             R+++C+YC +EF NSQALGG
Sbjct: 8  LKLFGINLLET-TSVQNQSSEPRPGSGSGSE--------SRKYECQYCCREFANSQALGG 67

Query: 61 HQNAHKKERLKKKMLQIQAQNSSLCHYLQNNYNSHFAP 99
          HQNAHKKER   K  Q+ A      H+   N++ H  P
Sbjct: 68 HQNAHKKERQLLKRAQMLATRGLPRHH---NFHPHTNP 93

[Close]
BLAST of CmoCh05G009090 vs. TAIR10
Match: AT5G06650.1 (AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 2.3e-10
Identity = 33/91 (36.26%), Postives = 47/91 (51.65%), Query Frame = 1 

Query: 1   MRLFGIELLDLPTGGGGEEHRDSPMTGLCGNLDDRPMRSKRRFQCEYCLKEFTNSQALGG 60
           +RLFG E       G   E  +S       N   +    ++RF+C YC + F  SQALGG
Sbjct: 19  IRLFGFEF------GASHEESESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGG 78

Query: 61  HQNAHKKERLKKKMLQIQAQNSSLCHYLQNN 92
           HQNAHK+ER + K   + +  ++  H  QN+
Sbjct: 79  HQNAHKRERQQTKRFNLHSNAAAFFHRQQNH 103

[Close]
BLAST of CmoCh05G009090 vs. TAIR10
Match: AT3G58070.1 (AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 4.3e-09
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 1 

Query: 18  EEHRDSPMTGLCGNLDDRPMRSKRRFQCEYCLKEFTNSQALGGHQNAHKKER 70
           EE  +   TG   + D+  +   RRF+C YC + F  SQALGGHQNAHK+ER
Sbjct: 67  EEEEEEDQTG-DNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRER 117

[Close]
BLAST of CmoCh05G009090 vs. NCBI nr
Match: gi|449452152|ref|XP_004143824.1| (PREDICTED: zinc finger protein 5 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 6.7e-28
Identity = 73/122 (59.84%), Postives = 85/122 (69.67%), Query Frame = 1 

Query: 1   MRLFGIELLDLPTGGGGEEH----RDSPMTG------LCGNLDDRPMRSKRR---FQCEY 60
           +RLFGIEL+++P     +E      DS  +       LC NLDDRPMR+ R    F C+Y
Sbjct: 17  LRLFGIELINVPPALEEKEESRRSNDSSSSSSSITRRLCDNLDDRPMRNVRTRTLFHCQY 76

Query: 61  CLKEFTNSQALGGHQNAHKKERLKKKMLQIQAQNSSLCHYLQNNYNSHFAPESAGRHISF 110
           CLKEFTNSQALGGHQNAHKKERLK+K LQI+AQNSSL  YLQ  +NSHF+ E  G HISF
Sbjct: 77  CLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLRRYLQTYFNSHFSHEFDGSHISF 136

[Close]
BLAST of CmoCh05G009090 vs. NCBI nr
Match: gi|659131518|ref|XP_008465725.1| (PREDICTED: zinc finger protein 5-like [Cucumis melo])

HSP 1 Score: 129.0 bits (323), Expect = 5.7e-27
Identity = 72/127 (56.69%), Postives = 83/127 (65.35%), Query Frame = 1 

Query: 1   MRLFGIELLDLPTGGGGEEHRDSPMTG---------------LCGNLDDRPMRSKRR--- 60
           +RLFGIEL++       EE  +S                   LCGNLDDRPMR+ +    
Sbjct: 17  LRLFGIELINNVPPALLEEKEESRRANHSSSSSSSSSSITRRLCGNLDDRPMRNVKTRTL 76

Query: 61  FQCEYCLKEFTNSQALGGHQNAHKKERLKKKMLQIQAQNSSLCHYLQNNYNSHFAPESAG 110
           F C+YCLKEFTNSQALGGHQNAHKKERLK+K LQI+AQ SSL  YLQN +NSHF+ E  G
Sbjct: 77  FHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQKSSLRRYLQNYFNSHFSHEFDG 136

[Close]
BLAST of CmoCh05G009090 vs. NCBI nr
Match: gi|700195998|gb|KGN51175.1| (hypothetical protein Csa_5G477610 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 1.0e-20
Identity = 53/75 (70.67%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 35  RPMRSKRRFQCEYCLKEFTNSQALGGHQNAHKKERLKKKMLQIQAQNSSLCHYLQNNYNS 94
           R +R++  F C+YCLKEFTNSQALGGHQNAHKKERLK+K LQI+AQNSSL  YLQ  +NS
Sbjct: 2   RNVRTRTLFHCQYCLKEFTNSQALGGHQNAHKKERLKQKRLQIEAQNSSLRRYLQTYFNS 61

Query: 95  HFAPESAGRHISFGF 110
           HF+ E  G HISF F
Sbjct: 62  HFSHEFDGSHISFTF 76

[Close]
BLAST of CmoCh05G009090 vs. NCBI nr
Match: gi|747050429|ref|XP_011071286.1| (PREDICTED: IAA-amino acid hydrolase ILR1-like 2 [Sesamum indicum])

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-15
Identity = 47/103 (45.63%), Postives = 64/103 (62.14%), Query Frame = 1 

Query: 1   MRLFGIEL--------LDLPTGGGGEEHRDSPMTGLCGNLDDRPMRSKRRFQCEYCLKEF 60
           ++LFGIEL          LP  G    +  +  +G      D  M  +++F+C YC K F
Sbjct: 23  LKLFGIELDSSSHEAHKGLPEVGEESINSSASGSGKSSGDGDHRMAEEKKFECGYCFKVF 82

Query: 61  TNSQALGGHQNAHKKERLKKKMLQIQAQNSSLCHYLQNNYNSH 96
            NSQALGGHQNAHKKER++KK LQ+QA+ +S+ +Y+Q  YNSH
Sbjct: 83  ANSQALGGHQNAHKKERMRKKRLQLQARKASINYYIQPYYNSH 125

[Close]
BLAST of CmoCh05G009090 vs. NCBI nr
Match: gi|470123314|ref|XP_004297672.1| (PREDICTED: zinc finger protein 5 [Fragaria vesca subsp. vesca])

HSP 1 Score: 89.4 bits (220), Expect = 5.0e-15
Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 1 

Query: 1   MRLFGIEL-----LDLPTGGGGEEHRDSPMTGLCGNLDDRPMRSKRRFQCEYCLKEFTNS 60
           +RLFG EL     +D      G+E  +S  T       +      ++F+C+YC KEF NS
Sbjct: 26  LRLFGFELNPYKNVDENIKAEGDESVNSSNTWKASTSSEAEQLDNKKFECQYCFKEFANS 85

Query: 61  QALGGHQNAHKKERLKKKMLQIQAQNSSLCHYLQ 90
           QALGGHQNAHKKER+KKK LQ+QA+ +S+ +YLQ
Sbjct: 86  QALGGHQNAHKKERMKKKRLQLQARKASINYYLQ 119

The following BLAST results are available for this feature:
BLAST of CmoCh05G009090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP5_ARATH5.0e-1545.05Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1[more]
ZFP6_ARATH2.4e-0938.78Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1[more]
GIS2_ARATH4.1e-0936.26Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1[more]
GIS_ARATH7.7e-0850.00Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1[more]
ZFP8_ARATH8.5e-0744.83Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1[more]
BLAST of CmoCh05G009090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNG0_CUCSA7.2e-2170.67Uncharacterized protein OS=Cucumis sativus GN=Csa_5G477610 PE=4 SV=1[more]
A0A0J8C615_BETVU4.5e-1550.00Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g147790 PE=4 S... [more]
A0A0A0KVQ6_CUCSA7.7e-1557.33Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603380 PE=4 SV=1[more]
A5B5F1_VITVI2.3e-1445.45Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029869 PE=4 SV=1[more]
I3T5F0_LOTJA3.8e-1447.27Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
BLAST of CmoCh05G009090 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10480.12.8e-1645.05 zinc finger protein 5[more]
AT1G68360.17.9e-1148.53 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G67030.11.3e-1038.78 zinc finger protein 6[more]
AT5G06650.12.3e-1036.26 C2H2 and C2HC zinc fingers superfamily protein[more]
AT3G58070.14.3e-0950.00 C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of CmoCh05G009090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449452152|ref|XP_004143824.1|6.7e-2859.84PREDICTED: zinc finger protein 5 [Cucumis sativus][more]
gi|659131518|ref|XP_008465725.1|5.7e-2756.69PREDICTED: zinc finger protein 5-like [Cucumis melo][more]
gi|700195998|gb|KGN51175.1|1.0e-2070.67hypothetical protein Csa_5G477610 [Cucumis sativus][more]
gi|747050429|ref|XP_011071286.1|2.2e-1545.63PREDICTED: IAA-amino acid hydrolase ILR1-like 2 [Sesamum indicum][more]
gi|470123314|ref|XP_004297672.1|5.0e-1547.87PREDICTED: zinc finger protein 5 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044036 cell wall macromolecule metabolic process
biological_process GO:0009736 cytokinin-activated signaling pathway
biological_process GO:0009740 gibberellic acid mediated signaling pathway
biological_process GO:0048510 regulation of timing of transition from vegetative to reproductive phase
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010026 trichome differentiation
biological_process GO:0010089 xylem development
biological_process GO:0008150 biological_process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G009090.1CmoCh05G009090.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 45..65
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 43..70
score: 11
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 41..69
score: 5.
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 40..70
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh05G009090CmaCh05G009020Cucurbita maxima (Rimu)cmacmoB787
CmoCh05G009090Cla005553Watermelon (97103) v1cmowmB743
CmoCh05G009090Lsi02G017530Bottle gourd (USVL1VR-Ls)cmolsiB713
CmoCh05G009090Cp4.1LG00g00400Cucurbita pepo (Zucchini)cmocpeB715
CmoCh05G009090Cla97C09G183550Watermelon (97103) v2cmowmbB803
CmoCh05G009090Bhi06G000697Wax gourdcmowgoB0930
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G009090Cucurbita pepo (Zucchini)cmocpeB753
CmoCh05G009090Cucurbita moschata (Rifu)cmocmoB157
CmoCh05G009090Cucurbita maxima (Rimu)cmacmoB197
CmoCh05G009090Cucurbita maxima (Rimu)cmacmoB201
CmoCh05G009090Wild cucumber (PI 183967)cmocpiB799
CmoCh05G009090Watermelon (Charleston Gray)cmowcgB686